RLG00000007084

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000255
Physical Location & Seq
Forward (+)
13397385 .. 13399502
2118 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007084

Sequence Viewer

Length: 1974 bp
ATGGCTCCTCCCAGTCTTCTCGGTCCTCCCGAGCTCCACAAACCCTCACCCACCACCACCGCTCCGCCACCACGCCAACCCGAATCCAAACCTGATTCCAAACCCGCCACCGGCGAACCCTTCGTGGACCTGATGGTGGCGAATTTCAACGACGTCGGAACCAAGCACGACCTGCCGATGGGACTGACGGAGAACGCCTCCGCCACGTTTCTCTCTACCGGCAACCCCTGCCTCGATCTCTTCTTCCACGTCGTCCCGAACACTCCGGCCGACTACCTCACCGAGCAGCTCCCCAAGGCCTGGGACCGCGACGCCCTCACCACGCTCAAGCTCATCTGCAATCTCCGCGGCGTGCGTGGCACCGGGAAATCCGACAAGGAAGGGTTCCACACGGCGGCGTTTTGGCTCCACAAGCACCACCCCAAAACCCTCGCCTGCAACCTCGCGTCCTTCGCCGAGTTCGGTTACTTCAAGGACCTGCCTGAGATCGTGTACCGGCTCCTGGAGGGGGAGGACGTGAGGAAGAAACAGAAGGCGGAGTGGCGGGAGAGGAAACGCGGCGGAGGCAGGAAGCAACGCGAGTCGAGTCAGGAATCCGGATCCGAAGGCGAAACCGGGTCGAGGTCCGAGAAAAAGAGAAGCAGGAGCGAGGTGCCGAAAGAGGAGAGGGAGAAGAAGGCCAGGGAGTGGCAGATGGGGGAGAAGGCCAAGGCGAGCGGGTTGAGGAAGGAGAAGAAGATCGCCATGGCCAAGAAGGTCGTGGTCCGGTACGAGCGAGACCCGGATTTCCGGTTCCTTCACGACCGGGTCTCGGATCTTTTCGCCGAGTGCTTGAAATCCGATATGGAGAATCTCAAGTCCAATCAGCTCAACAAGATAACCCTAGCGGCGAAGTGGTGCCCTTCGATTGACTCCTCATTCGATCGGGCCACTTTGATCTGTGAGAGCATTGCGAAGAAGATTTTCCCGCGCGAATCGAACAAGGAATATGAAGGCGTGGAGGAGGAGTCACATTATGCTTACAGAGTGAGGGACCGGCTGAGGAAGGAGGTGCTGGTGCCGCTGAGGAAGGCCTTGGAGTTGCCGGAGATTTACATGGGGGCTAACCAGTGGGGGAAGATTCCGTATAACAGAGTGGCCTCTGTGGCAATGAAGCTGTACAAGGACAAGTTCAAGAAGCACGATGAGGAGAGGTTTAATAAGTATTTGGAGGATGTGAAAGCCGGGAAGGCTAAGATTGCGGCGGGAGCACTGCTTCCGCATGAGATTATTGAGTCTCTGAATGATGGTGAGGGTGATGATGGGCAAGTTGCGGAGCTTCAGTGGAAGAGAATGGTGGAGGATATGTTCAAGTTGGGGAAGATGAAGAACTGTTTGGCTGTGTGTGATGTGAGTGGGAGCATGAGTGGGACTCCGATGGAGGTGGCGGTGGCGTTGGGGCTGTTGGTTTCGGAGTTGAGTGAGGACCCTTGGAAAGGGTTGGTGATCAGTTTCAGTGCGGATCCTCAGCTGCATTTGGTGAAGGGGGAGAGTCTTAAGGACAAGACTGATTTCATCAGGAATATGGATTGGGGGATGAGCACTAATTTCCAGAAGGTGTTTGATTTGCTTCTGAAAGTGGCTGTCAAGGGGAATTTGAAGCCGGAGAATATGATCAAGAGGCTGTTTGTGTTCAGTGACATGGAGTTTGATCAGGCTTCGGAAAATAAGTGGGAGACTGATTATGAGGTGATAGAGATGAAGTTTAAGGAGGCCGGGTATGGGGATGTGGTTCCGCAGTTGGTGTTTTGGAATCTGAGGCACTCCAGGTCTATCCCTGTGCCTGGGAATCAGAAAGGAACTGCTCTGTTGAGTGGATTCTCTAAGAACTTGCTTAAACTCTTTATGGATAATGATGGGGAAGTTCAGCCGGATATGTTCATGGATTTGGCCATTGCTGGACCAGAGTATCAGAAGCTGGTTGTGCTGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

658

Amino Acids

74.43

Weight (kDa)

7.92

Isoelectric Point (pI)

37.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 63 - 455 2.4e-142 Domain of unknown function (DUF2828)
DUF7788 PF25043 457 - 635 3.4e-79 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 156
Acc36I ACCTGC 2 cut(s) 180, 486
AccB1I GGYRCC 4 cut(s) 359, 652, 897, 1057
AccB7I CCANNNNNTGG 2 cut(s) 300, 687
AccBSI CCGCTC 2 cut(s) 62, 717
AccII CGCG 7 cut(s) 309, 348, 446, 558, 579, 970, 972
AccIII TCCGGA 1 cut(s) 596
AclWI GGATC 5 cut(s) 594, 607, 822, 1496, 1509
AcoI YGGCCR 3 cut(s) 267, 747, 1929
AcsI RAATTY 2 cut(s) 142, 1633
AcuI CTGAAG 1 cut(s) 1304
AcyI GRCGYC 2 cut(s) 153, 312
AfaI GTAC 3 cut(s) 494, 770, 1160
AflII CTTAAG 1 cut(s) 1535
AgsI TTSAA 6 cut(s) 148, 472, 835, 1174, 1351, 1639
AjiI CACGTC 2 cut(s) 250, 517
AjnI CCWGG 5 cut(s) 299, 501, 680, 1805, 1822
AjuI GAANNNNNNNTTGG 2 cut(s) 1358, 1390
AloI GAACNNNNNNTCC 4 cut(s) 776, 808, 1331, 1363
AluBI AGCT 8 cut(s) 34, 289, 331, 868, 1156, 1318, 1510, 1957
AluI AGCT 8 cut(s) 34, 289, 331, 868, 1156, 1318, 1510, 1957
Alw21I GWGCWC 3 cut(s) 36, 1252, 1583
Alw26I GTCTC 4 cut(s) 771, 814, 1281, 1709
AlwI GGATC 5 cut(s) 594, 607, 822, 1496, 1509
AlwNI CAGNNNCTG 1 cut(s) 1957
Ama87I CYCGRG 1 cut(s) 29
Aor13HI TCCGGA 1 cut(s) 596
ApeKI GCWGC 2 cut(s) 286, 1510
ApoI RAATTY 2 cut(s) 142, 1633
ArsI GACNNNNNNTTYG 4 cut(s) 902, 934, 1670, 1702
Asp700I GAANNNNTTC 1 cut(s) 962
AspLEI GCGC 1 cut(s) 972
AsuC2I CCSGG 6 cut(s) 364, 616, 782, 806, 1225, 1756
AsuHPI GGTGA 8 cut(s) 39, 271, 310, 1301, 1307, 1495, 1531, 1741
AvaI CYCGRG 1 cut(s) 29
AvaII GGWCC 9 cut(s) 23, 127, 304, 475, 624, 763, 1033, 1465, 1940
BaeGI GKGCMC 1 cut(s) 902
BaeI ACNNNNGTAYC 2 cut(s) 1931, 1964
BalI TGGCCA 2 cut(s) 749, 1931
BamHI GGATCC 2 cut(s) 599, 1501
BanI GGYRCC 4 cut(s) 359, 652, 897, 1057
BanII GRGCYC 1 cut(s) 36
BbsI GAAGAC 1 cut(s) 8
Bbv12I GWGCWC 3 cut(s) 36, 1252, 1583
BbvCI CCTCAGC 3 cut(s) 1040, 1064, 1506
BbvI GCAGC 2 cut(s) 298, 1497
BccI CCATC 7 cut(s) 127, 172, 688, 1280, 1295, 1411, 1889
BceAI ACGGC 1 cut(s) 408
BciT130I CCWGG 5 cut(s) 301, 503, 682, 1807, 1824
BclI TGATCA 3 cut(s) 1485, 1653, 1690
BcnI CCSGG 6 cut(s) 364, 616, 782, 806, 1225, 1756
BcoDI GTCTC 4 cut(s) 771, 814, 1281, 1709
BfaI CTAG 1 cut(s) 884
BfrI CTTAAG 1 cut(s) 1535
BfuAI ACCTGC 2 cut(s) 180, 486
BglI GCCNNNNNGGC 2 cut(s) 1145, 1229
BisI GCNGC 8 cut(s) 287, 349, 396, 559, 888, 1061, 1242, 1511
BlsI GCNGC 8 cut(s) 288, 350, 397, 560, 889, 1062, 1243, 1512
Bme18I GGWCC 9 cut(s) 23, 127, 304, 475, 624, 763, 1033, 1465, 1940
BmeT110I CYCGRG 1 cut(s) 29
BmgBI CACGTC 2 cut(s) 250, 517
BmrI ACTGGG 1 cut(s) 6
BmuI ACTGGG 1 cut(s) 6
BpiI GAAGAC 1 cut(s) 8
BplI GAGNNNNNCTC 4 cut(s) 182, 214, 1396, 1428
BpmI CTGGAG 2 cut(s) 524, 1789
Bpu10I CCTNAGC 3 cut(s) 1040, 1064, 1506
BpuEI CTTGAG 2 cut(s) 311, 839
BpuMI CCSGG 6 cut(s) 364, 616, 782, 806, 1225, 1756
BsaHI GRCGYC 2 cut(s) 153, 312
BsaI GGTCTC 2 cut(s) 771, 814
BsaJI CCNNGG 9 cut(s) 294, 300, 346, 681, 708, 744, 1074, 1469, 1823
BsaWI WCCGGW 3 cut(s) 596, 765, 789
Bse118I RCCGGY 4 cut(s) 110, 218, 495, 1035
Bse1I ACTGG 2 cut(s) 12, 1108
Bse3DI GCAATG 3 cut(s) 948, 1155, 1932
BseAI TCCGGA 1 cut(s) 596
BseBI CCWGG 5 cut(s) 301, 503, 682, 1807, 1824
BseDI CCNNGG 9 cut(s) 294, 300, 346, 681, 708, 744, 1074, 1469, 1823
BseGI GGATG 3 cut(s) 1219, 1581, 1771
BseMI GCAATG 3 cut(s) 948, 1155, 1932
BseMII CTCAG 5 cut(s) 474, 1031, 1055, 1520, 1787
BseNI ACTGG 2 cut(s) 12, 1108
BseRI GAGGAG 5 cut(s) 677, 904, 1016, 1019, 1202
BseSI GKGCMC 1 cut(s) 902
BseX3I CGGCCG 1 cut(s) 267
BseXI GCAGC 2 cut(s) 298, 1497
Bsh1236I CGCG 7 cut(s) 309, 348, 446, 558, 579, 970, 972
Bsh1285I CGRYCG 3 cut(s) 270, 805, 925
BshNI GGYRCC 4 cut(s) 359, 652, 897, 1057
BsiEI CGRYCG 3 cut(s) 270, 805, 925
BsiHKAI GWGCWC 3 cut(s) 36, 1252, 1583
BsiHKCI CYCGRG 1 cut(s) 29
BslFI GGGAC 5 cut(s) 195, 239, 317, 1046, 1423
BsmAI GTCTC 4 cut(s) 771, 814, 1281, 1709
BsmFI GGGAC 5 cut(s) 195, 239, 317, 1046, 1423
Bso31I GGTCTC 2 cut(s) 771, 814
BsoBI CYCGRG 1 cut(s) 29
Bsp1286I GDGCHC 4 cut(s) 36, 902, 1252, 1583
Bsp13I TCCGGA 1 cut(s) 596
Bsp1407I TGTACA 1 cut(s) 1158
Bsp19I CCATGG 1 cut(s) 744
BspCNI CTCAG 5 cut(s) 475, 1032, 1056, 1519, 1788
BspEI TCCGGA 1 cut(s) 596
BspFNI CGCG 7 cut(s) 309, 348, 446, 558, 579, 970, 972
BspMI ACCTGC 2 cut(s) 180, 486
BspPI GGATC 5 cut(s) 594, 607, 822, 1496, 1509
BspT107I GGYRCC 4 cut(s) 359, 652, 897, 1057
BspTI CTTAAG 1 cut(s) 1535
BspTNI GGTCTC 2 cut(s) 771, 814
BsrBI CCGCTC 2 cut(s) 62, 717
BsrDI GCAATG 3 cut(s) 948, 1155, 1932
BsrFI RCCGGY 4 cut(s) 110, 218, 495, 1035
BsrGI TGTACA 1 cut(s) 1158
BsrI ACTGG 2 cut(s) 12, 1108
BssAI RCCGGY 4 cut(s) 110, 218, 495, 1035
BssECI CCNNGG 9 cut(s) 294, 300, 346, 681, 708, 744, 1074, 1469, 1823
BssNI GRCGYC 2 cut(s) 153, 312
BssT1I CCWWGG 5 cut(s) 294, 708, 744, 1074, 1469
Bst2UI CCWGG 5 cut(s) 301, 503, 682, 1807, 1824
Bst4CI ACNGT 1 cut(s) 1373
Bst6I CTCTTC 2 cut(s) 245, 1322
BstACI GRCGYC 2 cut(s) 153, 312
BstAFI CTTAAG 1 cut(s) 1535
BstAPI GCANNNNNTGC 2 cut(s) 172, 228
BstAUI TGTACA 1 cut(s) 1158
BstC8I GCNNGC 3 cut(s) 353, 436, 715
BstDEI CTNAG 7 cut(s) 483, 1040, 1064, 1233, 1506, 1796, 1863
BstDSI CCRYGG 2 cut(s) 346, 744
BstENI CCTNNNNNAGG 1 cut(s) 1473
BstF5I GGATG 3 cut(s) 1219, 1581, 1771
BstFNI CGCG 7 cut(s) 309, 348, 446, 558, 579, 970, 972
BstHHI GCGC 1 cut(s) 972
BstMAI GTCTC 4 cut(s) 771, 814, 1281, 1709
BstMCI CGRYCG 3 cut(s) 270, 805, 925
BstNI CCWGG 5 cut(s) 301, 503, 682, 1807, 1824
BstSLI GKGCMC 1 cut(s) 902
BstUI CGCG 7 cut(s) 309, 348, 446, 558, 579, 970, 972
BstV1I GCAGC 2 cut(s) 298, 1497
BstV2I GAAGAC 1 cut(s) 8
BstX2I RGATCY 3 cut(s) 599, 814, 1501
BstYI RGATCY 3 cut(s) 599, 814, 1501
BstZI CGGCCG 1 cut(s) 267
BtgI CCRYGG 2 cut(s) 346, 744
BtrI CACGTC 2 cut(s) 250, 517
BtsCI GGATG 3 cut(s) 1219, 1581, 1771
BtsI GCAGTG 1 cut(s) 1250
BtsIMutI CAGTG 5 cut(s) 1115, 1250, 1328, 1501, 1681
BveI ACCTGC 2 cut(s) 180, 486
Cac8I GCNNGC 3 cut(s) 353, 436, 715
CaiI CAGNNNCTG 1 cut(s) 1957
CfoI GCGC 1 cut(s) 972
Cfr10I RCCGGY 4 cut(s) 110, 218, 495, 1035
Cfr42I CCGCGG 1 cut(s) 349
CseI GACGC 2 cut(s) 320, 435
Csp6I GTAC 3 cut(s) 493, 769, 1159
CviAII CATG 6 cut(s) 745, 1096, 1262, 1402, 1681, 1921
CviQI GTAC 3 cut(s) 493, 769, 1159
DdeI CTNAG 7 cut(s) 483, 1040, 1064, 1233, 1506, 1796, 1863
EaeI YGGCCR 3 cut(s) 267, 747, 1929
EagI CGGCCG 1 cut(s) 267
Eam1104I CTCTTC 2 cut(s) 245, 1322
EarI CTCTTC 2 cut(s) 245, 1322
EciI GGCGGA 4 cut(s) 54, 190, 551, 576
Ecl136II GAGCTC 1 cut(s) 34
EclXI CGGCCG 1 cut(s) 267
Eco130I CCWWGG 5 cut(s) 294, 708, 744, 1074, 1469
Eco147I AGGCCT 2 cut(s) 299, 1073
Eco24I GRGCYC 1 cut(s) 36
Eco31I GGTCTC 2 cut(s) 771, 814
Eco47I GGWCC 9 cut(s) 23, 127, 304, 475, 624, 763, 1033, 1465, 1940
Eco52I CGGCCG 1 cut(s) 267
Eco53kI GAGCTC 1 cut(s) 34
Eco57I CTGAAG 1 cut(s) 1304
Eco88I CYCGRG 1 cut(s) 29
EcoICRI GAGCTC 1 cut(s) 34
EcoNI CCTNNNNNAGG 1 cut(s) 1473
EcoO109I RGGNCCY 2 cut(s) 475, 1465
EcoRII CCWGG 5 cut(s) 299, 501, 680, 1805, 1822
EcoT14I CCWWGG 5 cut(s) 294, 708, 744, 1074, 1469
EcoT38I GRGCYC 1 cut(s) 36
ErhI CCWWGG 5 cut(s) 294, 708, 744, 1074, 1469
FaeI CATG 6 cut(s) 748, 1099, 1265, 1405, 1684, 1924
FaqI GGGAC 5 cut(s) 195, 239, 317, 1046, 1423
FatI CATG 6 cut(s) 744, 1095, 1261, 1401, 1680, 1920
FauI CCCGC 5 cut(s) 112, 537, 710, 975, 1237
FbaI TGATCA 3 cut(s) 1485, 1653, 1690
Fnu4HI GCNGC 8 cut(s) 287, 349, 396, 559, 888, 1061, 1242, 1511
FokI GGATG 3 cut(s) 1226, 1588, 1778
FriOI GRGCYC 1 cut(s) 36
Fsp4HI GCNGC 8 cut(s) 287, 349, 396, 559, 888, 1061, 1242, 1511
FspBI CTAG 1 cut(s) 884
GlaI GCGC 1 cut(s) 971
GluI GCNGC 8 cut(s) 287, 349, 396, 559, 888, 1061, 1242, 1511
GsuI CTGGAG 2 cut(s) 524, 1789
HgaI GACGC 2 cut(s) 320, 435
HhaI GCGC 1 cut(s) 972
Hin1I GRCGYC 2 cut(s) 153, 312
Hin1II CATG 6 cut(s) 748, 1099, 1265, 1405, 1684, 1924
Hin6I GCGC 1 cut(s) 970
HinP1I GCGC 1 cut(s) 970
HphI GGTGA 8 cut(s) 39, 271, 310, 1301, 1307, 1495, 1531, 1741
Hpy166II GTNNAC 2 cut(s) 127, 493
Hpy188III TCNNGA 9 cut(s) 29, 256, 590, 597, 800, 1174, 1558, 1591, 1657
Hpy8I GTNNAC 2 cut(s) 127, 493
Hpy99I CGWCG 4 cut(s) 155, 158, 254, 314
HpyCH4III ACNGT 1 cut(s) 1373
HpyCH4IV ACGT 4 cut(s) 153, 206, 249, 516
HpyCH4V TGCA 3 cut(s) 339, 438, 1513
HpyF3I CTNAG 7 cut(s) 483, 1040, 1064, 1233, 1506, 1796, 1863
HpySE526I ACGT 4 cut(s) 153, 206, 249, 516
Hsp92I GRCGYC 2 cut(s) 153, 312
Hsp92II CATG 6 cut(s) 748, 1099, 1265, 1405, 1684, 1924
HspAI GCGC 1 cut(s) 970
Kpn2I TCCGGA 1 cut(s) 596
Ksp22I TGATCA 3 cut(s) 1485, 1653, 1690
KspI CCGCGG 1 cut(s) 349
Lsp1109I GCAGC 2 cut(s) 298, 1497
MaeI CTAG 1 cut(s) 884
MaeII ACGT 4 cut(s) 153, 206, 249, 516
MaeIII GTNAC 3 cut(s) 464, 1008, 1676
MbiI CCGCTC 2 cut(s) 62, 717
MflI RGATCY 3 cut(s) 599, 814, 1501
MhlI GDGCHC 4 cut(s) 36, 902, 1252, 1583
MlsI TGGCCA 2 cut(s) 749, 1931
MluCI AATT 3 cut(s) 142, 1585, 1633
MluNI TGGCCA 2 cut(s) 749, 1931
MlyI GAGTC 7 cut(s) 590, 595, 905, 1016, 1283, 1405, 1540
MmeI TCCRAC 2 cut(s) 136, 396
Mox20I TGGCCA 2 cut(s) 749, 1931
MroI TCCGGA 1 cut(s) 596
MroXI GAANNNNTTC 1 cut(s) 962
MscI TGGCCA 2 cut(s) 749, 1931
MseI TTAA 4 cut(s) 1197, 1536, 1746, 1875
Msp20I TGGCCA 2 cut(s) 749, 1931
MspA1I CMGCKG 3 cut(s) 348, 1063, 1510
MspCI CTTAAG 1 cut(s) 1535
MvaI CCWGG 5 cut(s) 301, 503, 682, 1807, 1824
MvnI CGCG 7 cut(s) 309, 348, 446, 558, 579, 970, 972
NciI CCSGG 6 cut(s) 364, 616, 782, 806, 1225, 1756
NcoI CCATGG 1 cut(s) 744
NlaIII CATG 6 cut(s) 748, 1099, 1265, 1405, 1684, 1924
NmeAIII GCCGAG 2 cut(s) 481, 850
NmuCI GTSAC 2 cut(s) 1008, 1676
PceI AGGCCT 2 cut(s) 299, 1073
PcsI WCGNNNNNNNCGW 1 cut(s) 27
PdmI GAANNNNTTC 1 cut(s) 962
PfeI GAWTC 9 cut(s) 83, 95, 593, 850, 974, 1120, 1792, 1828, 1857
PflFI GACNNNGTC 1 cut(s) 806
PflMI CCANNNNNTGG 2 cut(s) 300, 687
PfoI TCCNGGA 1 cut(s) 501
PkrI GCNGC 8 cut(s) 288, 350, 397, 560, 889, 1062, 1243, 1512
Ple19I CGATCG 1 cut(s) 925
PleI GAGTC 7 cut(s) 589, 594, 905, 1015, 1282, 1405, 1539
PpsI GAGTC 7 cut(s) 589, 594, 905, 1015, 1282, 1405, 1539
PpuMI RGGWCCY 2 cut(s) 475, 1465
Psp124BI GAGCTC 1 cut(s) 36
Psp5II RGGWCCY 2 cut(s) 475, 1465
Psp6I CCWGG 5 cut(s) 299, 501, 680, 1805, 1822
PspGI CCWGG 5 cut(s) 299, 501, 680, 1805, 1822
PspPPI RGGWCCY 2 cut(s) 475, 1465
PstNI CAGNNNCTG 1 cut(s) 1957
PsuI RGATCY 3 cut(s) 599, 814, 1501
PsyI GACNNNGTC 1 cut(s) 806
PvuI CGATCG 1 cut(s) 925
PvuII CAGCTG 1 cut(s) 1510
RsaI GTAC 3 cut(s) 494, 770, 1160
RsaNI GTAC 3 cut(s) 493, 769, 1159
SacI GAGCTC 1 cut(s) 36
SacII CCGCGG 1 cut(s) 349
SaqAI TTAA 4 cut(s) 1197, 1536, 1746, 1875
SatI GCNGC 8 cut(s) 287, 349, 396, 559, 888, 1061, 1242, 1511
SchI GAGTC 7 cut(s) 590, 595, 905, 1016, 1283, 1405, 1540
SduI GDGCHC 4 cut(s) 36, 902, 1252, 1583
Sfr303I CCGCGG 1 cut(s) 349
SgrAI CRCCGGYG 1 cut(s) 110
SgrBI CCGCGG 1 cut(s) 349
SinI GGWCC 9 cut(s) 23, 127, 304, 475, 624, 763, 1033, 1465, 1940
SmlI CTYRAG 3 cut(s) 326, 854, 1535
SmoI CTYRAG 3 cut(s) 326, 854, 1535
Sse9I AATT 3 cut(s) 142, 1585, 1633
SseBI AGGCCT 2 cut(s) 299, 1073
SspMI CTAG 1 cut(s) 884
SstI GAGCTC 1 cut(s) 36
StuI AGGCCT 2 cut(s) 299, 1073
StyI CCWWGG 5 cut(s) 294, 708, 744, 1074, 1469
TaaI ACNGT 1 cut(s) 1373
TaiI ACGT 4 cut(s) 156, 209, 252, 519
TaqI TCGA 6 cut(s) 234, 584, 620, 905, 921, 977
TaqII GACCGA 1 cut(s) 11
TasI AATT 3 cut(s) 142, 1585, 1633
TatI WGTACW 1 cut(s) 1158
TauI GCSGC 6 cut(s) 351, 398, 561, 890, 1063, 1244
TfiI GAWTC 9 cut(s) 83, 95, 593, 850, 974, 1120, 1792, 1828, 1857
Tru1I TTAA 4 cut(s) 1197, 1536, 1746, 1875
Tru9I TTAA 4 cut(s) 1197, 1536, 1746, 1875
TscAI CASTG 5 cut(s) 1115, 1257, 1328, 1501, 1681
TseFI GTSAC 2 cut(s) 1008, 1676
TseI GCWGC 2 cut(s) 286, 1510
Tsp45I GTSAC 2 cut(s) 1008, 1676
TspDTI ATGAA 6 cut(s) 1005, 1166, 1379, 1543, 1754, 1909
TspGWI ACGGA 2 cut(s) 203, 1113
TspRI CASTG 5 cut(s) 1115, 1257, 1328, 1501, 1681
Tth111I GACNNNGTC 1 cut(s) 806
Van91I CCANNNNNTGG 2 cut(s) 300, 687
Vha464I CTTAAG 1 cut(s) 1535
VpaK11BI GGWCC 9 cut(s) 23, 127, 304, 475, 624, 763, 1033, 1465, 1940
XagI CCTNNNNNAGG 1 cut(s) 1473
XapI RAATTY 2 cut(s) 142, 1633
XcmI CCANNNNNNNNNTGG 1 cut(s) 757
XmnI GAANNNNTTC 1 cut(s) 962
XspI CTAG 1 cut(s) 884
ZraI GACGTC 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.