Rh2BG386700

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000255
Physical Location & Seq
Reverse (-)
54822336 .. 54823556
1221 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG386700.1

Sequence Viewer

Length: 1221 bp
ATGGCCAAGAAGGCCGTTGAGAGGTACCAGCGAGACCCGGATTACCGGTTTTTATATGACCGGGTTTCGGATCTTTTCAGTGAGTGTTTGAAGTCCGATGTCGAGAATCTCAAGGCGAATCAGTACAAGAAGATCAGCTTGGCAGCCAAGTGGTGCCCTTCTATCGATTCGTCGTTTGATAAGGCAACATTGCTATGTGAAAGCATAGCAAGGAACGTTTTCCCTAGGGAATCGTATCCGGAATATCAAGGAATCGAGGAGGCTCATTATGTTTACAGAGTCCGAGACCGGCTGAGGAAGGAGATTCTTGTGCCGCTGAGGAAGGTTTTGGAGTTGCCTGAGGTTTATATTGGAGCTAATGACTGGAATTCAATTCCTTATAATCGAGTCGCCTCGTTGGCCATGAAGCTTTACAAGGAGAAGTTCTTCAAGCATGATGAAGAGAGGTTCAAAAAGTACTTGGATGATGTGCAGGACGGCAAGTCCAAGATTGCTGCCGGTGCTCTGCTGCCGCACGTGATCATAGCCTCTCTGAGGGACAGTGATGGGGGCCAAGTGGCCGAGCTTCAGTGGCAGAGAATGGTAGAGGATATGTTGAAGTTGGGGAAGATGAAGAATTGCTTGGCTGTGTGTGACGTGTCCGGAAGCATGAGTGGACAGCCAATGGAGGTGTGTGTGGCTTTGGGGCTTTTGGTGTCTGAGCTGTGTGATGAGCCATGGAAAGGGAAGGTGATCACCTTCAGTCAGAACCCTCAACTGCATTTAATCCGTGGGGAAAGTCTCGAGTCCAAGACCAATTTTATCAGGTTTATGGAATGGGGGATGAACACTGATTTTCAGAAGGTGTTTGATTTGCTTCTCCAGGTGGCGGTTAATGGAAAGTTGAAGCCGGAAAATATGATCAAGCGGATTTTTGTGTTCAGTGACATGGAGTTTGATCAGGCCTCGTCAAATAGATGGGAGACTGATTATGAGGTGATTCAAAGAAAGTATAGGGAGAATGGGTATGGGGATGCGGTGCCACAGATAGTGTTTTGGAATCTGAGGGACTCGAGGTCTACTCCTGTGCCAGGGACTCAACCTGGGGTGGCTTTGTTGAGTGGCTTCTCCAAGAACTTGCTCAAGTTGTTCCTGGATTACGATGGGGAAATCCGCCCGGACCTGACCATGGAATTGGCTATCTCTGGCCCTGAGTATCAGAAGCTGGTTGTCCTGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

406

Amino Acids

46.77

Weight (kDa)

6.01

Isoelectric Point (pI)

32.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 2 - 204 1.1e-83 Domain of unknown function (DUF2828)
DUF7788 PF25043 206 - 384 5.7e-81 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 381
Acc65I GGTACC 1 cut(s) 24
AccB1I GGYRCC 3 cut(s) 24, 153, 1018
AccI GTMKAC 1 cut(s) 1058
AccIII TCCGGA 2 cut(s) 238, 641
AciI CCGC 6 cut(s) 314, 512, 869, 907, 1016, 1153
AclI AACGTT 1 cut(s) 216
AclWI GGATC 1 cut(s) 78
AcoI YGGCCR 3 cut(s) 3, 399, 558
AcsI RAATTY 1 cut(s) 367
AcuI CTGAAG 2 cut(s) 551, 724
AcvI CACGTG 1 cut(s) 517
AfaI GTAC 3 cut(s) 26, 125, 458
AfiI CCNNNNNNNGG 7 cut(s) 21, 67, 534, 722, 868, 1070, 1168
AflIII ACRYGT 1 cut(s) 636
AgeI ACCGGT 1 cut(s) 45
AgsI TTSAA 7 cut(s) 91, 372, 430, 451, 598, 886, 983
AhdI GACNNNNNGTC 2 cut(s) 481, 1054
AjiI CACGTC 1 cut(s) 637
AjnI CCWGG 5 cut(s) 861, 1069, 1081, 1131, 1212
AjuI GAANNNNNNNTTGG 4 cut(s) 122, 154, 605, 637
AluBI AGCT 6 cut(s) 138, 356, 409, 565, 703, 1204
AluI AGCT 6 cut(s) 138, 356, 409, 565, 703, 1204
Alw21I GWGCWC 1 cut(s) 505
Alw26I GTCTC 4 cut(s) 27, 279, 785, 956
AlwI GGATC 1 cut(s) 78
AlwNI CAGNNNCTG 1 cut(s) 1204
Ama87I CYCGRG 2 cut(s) 782, 1051
Aor13HI TCCGGA 2 cut(s) 238, 641
AoxI GGCC 7 cut(s) 3, 12, 399, 550, 558, 942, 1186
ApeKI GCWGC 3 cut(s) 143, 494, 508
ApoI RAATTY 1 cut(s) 367
ArsI GACNNNNNNTTYG 2 cut(s) 917, 949
AsiGI ACCGGT 1 cut(s) 45
Asp700I GAANNNNTTC 2 cut(s) 218, 425
Asp718I GGTACC 1 cut(s) 24
AspA2I CCTAGG 1 cut(s) 224
AspS9I GGNCC 3 cut(s) 550, 1159, 1187
AsuC2I CCSGG 3 cut(s) 38, 62, 1157
AsuHPI GGTGA 3 cut(s) 727, 742, 988
AvaI CYCGRG 2 cut(s) 782, 1051
AvaII GGWCC 1 cut(s) 1159
AvrII CCTAGG 1 cut(s) 224
AxyI CCTNAGG 1 cut(s) 339
BaeGI GKGCMC 1 cut(s) 158
BalI TGGCCA 2 cut(s) 5, 401
BanI GGYRCC 3 cut(s) 24, 153, 1018
BbrPI CACGTG 1 cut(s) 517
Bbv12I GWGCWC 1 cut(s) 505
BbvCI CCTCAGC 2 cut(s) 293, 317
BbvI GCAGC 3 cut(s) 155, 481, 495
BccI CCATC 3 cut(s) 539, 951, 1136
BceAI ACGGC 1 cut(s) 493
BciT130I CCWGG 5 cut(s) 863, 1071, 1083, 1133, 1214
BciVI GTATCC 1 cut(s) 246
BclI TGATCA 4 cut(s) 519, 732, 900, 937
BcnI CCSGG 3 cut(s) 38, 62, 1157
BcoDI GTCTC 4 cut(s) 27, 279, 785, 956
BfaI CTAG 1 cut(s) 225
BfuI GTATCC 1 cut(s) 246
BglI GCCNNNNNGGC 2 cut(s) 11, 398
BisI GCNGC 5 cut(s) 144, 314, 495, 509, 512
BlnI CCTAGG 1 cut(s) 224
BlsI GCNGC 5 cut(s) 145, 315, 496, 510, 513
BmcAI AGTACT 1 cut(s) 458
Bme1390I CCNGG 8 cut(s) 38, 62, 863, 1071, 1083, 1133, 1157, 1214
Bme18I GGWCC 1 cut(s) 1159
BmeRI GACNNNNNGTC 2 cut(s) 481, 1054
BmeT110I CYCGRG 2 cut(s) 782, 1051
BmgBI CACGTC 1 cut(s) 637
BmgT120I GGNCC 3 cut(s) 550, 1159, 1187
BmiI GGNNCC 4 cut(s) 26, 155, 551, 1020
BmrFI CCNGG 8 cut(s) 38, 62, 863, 1071, 1083, 1133, 1157, 1214
BmsI GCATC 1 cut(s) 1003
BplI GAGNNNNNCTC 2 cut(s) 1045, 1077
BpmI CTGGAG 1 cut(s) 845
Bpu10I CCTNAGC 2 cut(s) 293, 317
BpuEI CTTGAG 2 cut(s) 95, 1106
BpuMI CCSGG 3 cut(s) 38, 62, 1157
Bsa29I ATCGAT 1 cut(s) 165
BsaAI YACGTR 1 cut(s) 517
BsaI GGTCTC 2 cut(s) 27, 279
BsaJI CCNNGG 6 cut(s) 224, 716, 769, 1070, 1082, 1167
BsaWI WCCGGW 3 cut(s) 45, 238, 641
BsaXI ACNNNNNCTCC 2 cut(s) 989, 1019
Bsc4I CCNNNNNNNGG 7 cut(s) 21, 67, 534, 722, 868, 1070, 1168
Bse118I RCCGGY 3 cut(s) 45, 288, 497
Bse1I ACTGG 1 cut(s) 368
Bse21I CCTNAGG 1 cut(s) 339
Bse3DI GCAATG 1 cut(s) 188
BseAI TCCGGA 2 cut(s) 238, 641
BseBI CCWGG 5 cut(s) 863, 1071, 1083, 1133, 1214
BseCI ATCGAT 1 cut(s) 165
BseDI CCNNGG 6 cut(s) 224, 716, 769, 1070, 1082, 1167
BseGI GGATG 3 cut(s) 469, 828, 1018
BseLI CCNNNNNNNGG 7 cut(s) 21, 67, 534, 722, 868, 1070, 1168
BseMI GCAATG 1 cut(s) 188
BseMII CTCAG 7 cut(s) 284, 308, 330, 524, 690, 1034, 1182
BseNI ACTGG 1 cut(s) 368
BseRI GAGGAG 1 cut(s) 272
BseSI GKGCMC 1 cut(s) 158
BseXI GCAGC 3 cut(s) 155, 481, 495
BsgI GTGCAG 1 cut(s) 491
BshFI GGCC 7 cut(s) 5, 14, 401, 552, 560, 944, 1188
BshNI GGYRCC 3 cut(s) 24, 153, 1018
BshTI ACCGGT 1 cut(s) 45
BshVI ATCGAT 1 cut(s) 165
BsiHKAI GWGCWC 1 cut(s) 505
BsiHKCI CYCGRG 2 cut(s) 782, 1051
BsiSI CCGG 9 cut(s) 38, 46, 61, 239, 289, 498, 642, 890, 1157
BslFI GGGAC 3 cut(s) 551, 1061, 1087
BslI CCNNNNNNNGG 7 cut(s) 21, 67, 534, 722, 868, 1070, 1168
BsmAI GTCTC 4 cut(s) 27, 279, 785, 956
BsmFI GGGAC 3 cut(s) 551, 1061, 1087
BsnI GGCC 7 cut(s) 5, 14, 401, 552, 560, 944, 1188
Bso31I GGTCTC 2 cut(s) 27, 279
BsoBI CYCGRG 2 cut(s) 782, 1051
Bsp1286I GDGCHC 2 cut(s) 158, 505
Bsp13I TCCGGA 2 cut(s) 238, 641
Bsp143I GATC 6 cut(s) 70, 132, 519, 732, 900, 937
Bsp19I CCATGG 2 cut(s) 716, 1167
BspACI CCGC 6 cut(s) 314, 512, 869, 907, 1016, 1153
BspANI GGCC 7 cut(s) 5, 14, 401, 552, 560, 944, 1188
BspCNI CTCAG 7 cut(s) 285, 309, 331, 525, 691, 1035, 1183
BspDI ATCGAT 1 cut(s) 165
BspEI TCCGGA 2 cut(s) 238, 641
BspLI GGNNCC 4 cut(s) 26, 155, 551, 1020
BspPI GGATC 1 cut(s) 78
BspT107I GGYRCC 3 cut(s) 24, 153, 1018
BspTNI GGTCTC 2 cut(s) 27, 279
BsrDI GCAATG 1 cut(s) 188
BsrFI RCCGGY 3 cut(s) 45, 288, 497
BsrI ACTGG 1 cut(s) 368
BssAI RCCGGY 3 cut(s) 45, 288, 497
BssECI CCNNGG 6 cut(s) 224, 716, 769, 1070, 1082, 1167
BssMI GATC 6 cut(s) 70, 132, 519, 732, 900, 937
BssT1I CCWWGG 3 cut(s) 224, 716, 1167
Bst2UI CCWGG 5 cut(s) 863, 1071, 1083, 1133, 1214
Bst4CI ACNGT 1 cut(s) 542
Bst6I CTCTTC 1 cut(s) 435
BstBAI YACGTR 1 cut(s) 517
BstDEI CTNAG 7 cut(s) 293, 317, 339, 533, 699, 1043, 1191
BstDSI CCRYGG 3 cut(s) 716, 769, 1167
BstENI CCTNNNNNAGG 2 cut(s) 532, 1068
BstF5I GGATG 3 cut(s) 469, 828, 1018
BstKTI GATC 6 cut(s) 73, 135, 522, 735, 903, 940
BstMAI GTCTC 4 cut(s) 27, 279, 785, 956
BstMBI GATC 6 cut(s) 70, 132, 519, 732, 900, 937
BstMWI GCNNNNNNNGC 4 cut(s) 11, 398, 500, 571
BstNI CCWGG 5 cut(s) 863, 1071, 1083, 1133, 1214
BstSCI CCNGG 8 cut(s) 36, 60, 861, 1069, 1081, 1131, 1155, 1212
BstSLI GKGCMC 1 cut(s) 158
BstV1I GCAGC 3 cut(s) 155, 481, 495
BstX2I RGATCY 1 cut(s) 70
BstXI CCANNNNNNTGG 1 cut(s) 1174
BstYI RGATCY 1 cut(s) 70
Bsu15I ATCGAT 1 cut(s) 165
Bsu36I CCTNAGG 1 cut(s) 339
BsuI GTATCC 1 cut(s) 246
BsuRI GGCC 7 cut(s) 5, 14, 401, 552, 560, 944, 1188
BsuTUI ATCGAT 1 cut(s) 165
BtgI CCRYGG 3 cut(s) 716, 769, 1167
BtrI CACGTC 1 cut(s) 637
BtsCI GGATG 3 cut(s) 469, 828, 1018
BtsIMutI CAGTG 5 cut(s) 85, 547, 575, 828, 928
CaiI CAGNNNCTG 1 cut(s) 1204
Cfr10I RCCGGY 3 cut(s) 45, 288, 497
Cfr13I GGNCC 3 cut(s) 550, 1159, 1187
ClaI ATCGAT 1 cut(s) 165
Csp6I GTAC 3 cut(s) 25, 124, 457
CspAI ACCGGT 1 cut(s) 45
CviAII CATG 6 cut(s) 403, 434, 649, 717, 928, 1168
CviQI GTAC 3 cut(s) 25, 124, 457
DdeI CTNAG 7 cut(s) 293, 317, 339, 533, 699, 1043, 1191
DpnI GATC 6 cut(s) 72, 134, 521, 734, 902, 939
DpnII GATC 6 cut(s) 70, 132, 519, 732, 900, 937
DriI GACNNNNNGTC 2 cut(s) 481, 1054
EaeI YGGCCR 3 cut(s) 3, 399, 558
Eam1104I CTCTTC 1 cut(s) 435
Eam1105I GACNNNNNGTC 2 cut(s) 481, 1054
EarI CTCTTC 1 cut(s) 435
EciI GGCGGA 1 cut(s) 1142
Eco130I CCWWGG 3 cut(s) 224, 716, 1167
Eco147I AGGCCT 1 cut(s) 944
Eco31I GGTCTC 2 cut(s) 27, 279
Eco47I GGWCC 1 cut(s) 1159
Eco57I CTGAAG 2 cut(s) 551, 724
Eco72I CACGTG 1 cut(s) 517
Eco81I CCTNAGG 1 cut(s) 339
Eco88I CYCGRG 2 cut(s) 782, 1051
EcoNI CCTNNNNNAGG 2 cut(s) 532, 1068
EcoRI GAATTC 1 cut(s) 367
EcoRII CCWGG 5 cut(s) 861, 1069, 1081, 1131, 1212
EcoT14I CCWWGG 3 cut(s) 224, 716, 1167
ErhI CCWWGG 3 cut(s) 224, 716, 1167
FaeI CATG 6 cut(s) 406, 437, 652, 720, 931, 1171
FalI AAGNNNNNCTT 4 cut(s) 122, 154, 605, 637
FaqI GGGAC 3 cut(s) 551, 1061, 1087
FatI CATG 6 cut(s) 402, 433, 648, 716, 927, 1167
FbaI TGATCA 4 cut(s) 519, 732, 900, 937
FblI GTMKAC 1 cut(s) 1058
Fnu4HI GCNGC 5 cut(s) 144, 314, 495, 509, 512
FokI GGATG 3 cut(s) 476, 835, 1025
Fsp4HI GCNGC 5 cut(s) 144, 314, 495, 509, 512
FspBI CTAG 1 cut(s) 225
GluI GCNGC 5 cut(s) 144, 314, 495, 509, 512
GsuI CTGGAG 1 cut(s) 845
HaeIII GGCC 7 cut(s) 5, 14, 401, 552, 560, 944, 1188
HapII CCGG 9 cut(s) 38, 46, 61, 239, 289, 498, 642, 890, 1157
Hin1II CATG 6 cut(s) 406, 437, 652, 720, 931, 1171
HindIII AAGCTT 1 cut(s) 407
HpaII CCGG 9 cut(s) 38, 46, 61, 239, 289, 498, 642, 890, 1157
HphI GGTGA 3 cut(s) 727, 742, 988
Hpy166II GTNNAC 3 cut(s) 274, 656, 1059
Hpy188I TCNGA 9 cut(s) 70, 97, 284, 534, 700, 747, 840, 1044, 1200
Hpy188III TCNNGA 4 cut(s) 103, 239, 642, 782
Hpy8I GTNNAC 3 cut(s) 274, 656, 1059
Hpy99I CGWCG 1 cut(s) 175
HpyAV CCTTC 7 cut(s) 4, 168, 292, 316, 721, 748, 835
HpyCH4III ACNGT 1 cut(s) 542
HpyCH4IV ACGT 3 cut(s) 216, 516, 636
HpyCH4V TGCA 2 cut(s) 472, 760
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 398, 500, 571
HpyF3I CTNAG 7 cut(s) 293, 317, 339, 533, 699, 1043, 1191
HpySE526I ACGT 3 cut(s) 216, 516, 636
Hsp92II CATG 6 cut(s) 406, 437, 652, 720, 931, 1171
Kpn2I TCCGGA 2 cut(s) 238, 641
KpnI GGTACC 1 cut(s) 28
Ksp22I TGATCA 4 cut(s) 519, 732, 900, 937
Kzo9I GATC 6 cut(s) 70, 132, 519, 732, 900, 937
LmnI GCTCC 1 cut(s) 353
Lsp1109I GCAGC 3 cut(s) 155, 481, 495
LweI GCATC 1 cut(s) 1003
MaeI CTAG 1 cut(s) 225
MaeII ACGT 3 cut(s) 216, 516, 636
MaeIII GTNAC 2 cut(s) 632, 923
MalI GATC 6 cut(s) 72, 134, 521, 734, 902, 939
MboI GATC 6 cut(s) 70, 132, 519, 732, 900, 937
MboII GAAGA 5 cut(s) 142, 418, 452, 619, 625
MflI RGATCY 1 cut(s) 70
MhlI GDGCHC 2 cut(s) 158, 505
MlsI TGGCCA 2 cut(s) 5, 401
MluCI AATT 5 cut(s) 367, 372, 616, 796, 1172
MluNI TGGCCA 2 cut(s) 5, 401
MlyI GAGTC 5 cut(s) 288, 396, 794, 1043, 1069
Mox20I TGGCCA 2 cut(s) 5, 401
MroI TCCGGA 2 cut(s) 238, 641
MroXI GAANNNNTTC 2 cut(s) 218, 425
MscI TGGCCA 2 cut(s) 5, 401
MseI TTAA 2 cut(s) 764, 873
MslI CAYNNNNRTG 1 cut(s) 193
Msp20I TGGCCA 2 cut(s) 5, 401
MspA1I CMGCKG 1 cut(s) 316
MspI CCGG 9 cut(s) 38, 46, 61, 239, 289, 498, 642, 890, 1157
MspR9I CCNGG 8 cut(s) 38, 62, 863, 1071, 1083, 1133, 1157, 1214
MvaI CCWGG 5 cut(s) 863, 1071, 1083, 1133, 1214
MwoI GCNNNNNNNGC 4 cut(s) 11, 398, 500, 571
NciI CCSGG 3 cut(s) 38, 62, 1157
NcoI CCATGG 2 cut(s) 716, 1167
NdeII GATC 6 cut(s) 70, 132, 519, 732, 900, 937
NlaIII CATG 6 cut(s) 406, 437, 652, 720, 931, 1171
NlaIV GGNNCC 4 cut(s) 26, 155, 551, 1020
NmeAIII GCCGAG 1 cut(s) 586
NmuCI GTSAC 2 cut(s) 632, 923
PaeR7I CTCGAG 2 cut(s) 782, 1051
PceI AGGCCT 1 cut(s) 944
PdmI GAANNNNTTC 2 cut(s) 218, 425
PfeI GAWTC 8 cut(s) 106, 118, 167, 230, 252, 304, 979, 1039
PfoI TCCNGGA 2 cut(s) 1131, 1212
PinAI ACCGGT 1 cut(s) 45
PkrI GCNGC 5 cut(s) 145, 315, 496, 510, 513
PleI GAGTC 5 cut(s) 287, 395, 793, 1043, 1069
PmaCI CACGTG 1 cut(s) 517
PmlI CACGTG 1 cut(s) 517
PpsI GAGTC 5 cut(s) 287, 395, 793, 1043, 1069
Ppu21I YACGTR 1 cut(s) 517
PsiI TTATAA 1 cut(s) 381
Psp1406I AACGTT 1 cut(s) 216
Psp6I CCWGG 5 cut(s) 861, 1069, 1081, 1131, 1212
PspCI CACGTG 1 cut(s) 517
PspGI CCWGG 5 cut(s) 861, 1069, 1081, 1131, 1212
PspN4I GGNNCC 4 cut(s) 26, 155, 551, 1020
PspPI GGNCC 3 cut(s) 550, 1159, 1187
PspXI VCTCGAGB 1 cut(s) 1051
PstNI CAGNNNCTG 1 cut(s) 1204
PsuI RGATCY 1 cut(s) 70
RsaI GTAC 3 cut(s) 26, 125, 458
RsaNI GTAC 3 cut(s) 25, 124, 457
RseI CAYNNNNRTG 1 cut(s) 193
SaqAI TTAA 2 cut(s) 764, 873
SatI GCNGC 5 cut(s) 144, 314, 495, 509, 512
Sau3AI GATC 6 cut(s) 70, 132, 519, 732, 900, 937
Sau96I GGNCC 3 cut(s) 550, 1159, 1187
ScaI AGTACT 1 cut(s) 458
SchI GAGTC 5 cut(s) 288, 396, 794, 1043, 1069
ScrFI CCNGG 8 cut(s) 38, 62, 863, 1071, 1083, 1133, 1157, 1214
SduI GDGCHC 2 cut(s) 158, 505
SfaNI GCATC 1 cut(s) 1003
SfiI GGCCNNNNNGGCC 1 cut(s) 11
Sfr274I CTCGAG 2 cut(s) 782, 1051
SinI GGWCC 1 cut(s) 1159
SlaI CTCGAG 2 cut(s) 782, 1051
SmiMI CAYNNNNRTG 1 cut(s) 193
SmlI CTYRAG 4 cut(s) 110, 782, 1051, 1121
SmoI CTYRAG 4 cut(s) 110, 782, 1051, 1121
Sse9I AATT 5 cut(s) 367, 372, 616, 796, 1172
SseBI AGGCCT 1 cut(s) 944
SsiI CCGC 6 cut(s) 314, 512, 869, 907, 1016, 1153
SspMI CTAG 1 cut(s) 225
StuI AGGCCT 1 cut(s) 944
StyD4I CCNGG 8 cut(s) 36, 60, 861, 1069, 1081, 1131, 1155, 1212
StyI CCWWGG 3 cut(s) 224, 716, 1167
TaaI ACNGT 1 cut(s) 542
TaiI ACGT 3 cut(s) 219, 519, 639
TaqI TCGA 6 cut(s) 102, 165, 255, 385, 783, 1052
TasI AATT 5 cut(s) 367, 372, 616, 796, 1172
TatI WGTACW 2 cut(s) 123, 456
TauI GCSGC 2 cut(s) 316, 514
TfiI GAWTC 8 cut(s) 106, 118, 167, 230, 252, 304, 979, 1039
Tru1I TTAA 2 cut(s) 764, 873
Tru9I TTAA 2 cut(s) 764, 873
TscAI CASTG 5 cut(s) 85, 547, 575, 835, 928
TseFI GTSAC 2 cut(s) 632, 923
TseI GCWGC 3 cut(s) 143, 494, 508
Tsp45I GTSAC 2 cut(s) 632, 923
TspDTI ATGAA 4 cut(s) 419, 453, 626, 839
TspGWI ACGGA 1 cut(s) 758
TspRI CASTG 5 cut(s) 85, 547, 575, 835, 928
VpaK11BI GGWCC 1 cut(s) 1159
XagI CCTNNNNNAGG 2 cut(s) 532, 1068
XapI RAATTY 1 cut(s) 367
XhoI CTCGAG 2 cut(s) 782, 1051
XmaJI CCTAGG 1 cut(s) 224
XmiI GTMKAC 1 cut(s) 1058
XmnI GAANNNNTTC 2 cut(s) 218, 425
XspI CTAG 1 cut(s) 225
ZrmI AGTACT 1 cut(s) 458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.