pycom10g24800

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0000255
Physical Location & Seq
Reverse (-)
26553708 .. 26555654
1947 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g24800.1

Sequence Viewer

Length: 1947 bp
ATGGCTCCTCCAAGTCTTCTTCTTGGTCCTCCGGAGCTCAAAAATTCCCCCAAATCCGATTCCAGCTATCCAGTGGATGCCGATTACTACGGCGGCGAAGCCACCACCGGCAGACCCCCGATGGGCTTCACCGAGAACGGCGCACCCACCTTCGTCTCCTCAGGCAACCCCTGCCTCGATCTCTTCTTCCACGTCGTGCCCGACACCCCGGCATCCTACCTCAATCAACAGCTCCCGCTGGCTTGGTCCCACGACGCCCTAACCACCCTCAAACTAATCTGCAACCTCCGCGGCGTGCGCGGCACCGGAAAGTCTGACAAGCAGAACTTCTACATGGCTGCGATTTGGCTCCACAACCACCACCCCAGAACCCTGGCTTGCAATCTCTTCTCTTTCGCGGAGTTTGGGTACTTTAAGGACCTCCCGGAGATTCTTTACCGGCTTCTAGAAGGTCCGAACGTGAGGGCGATCCAGAAGAGCCAGTGGTTGGAGAGGAAGAGCAGCGTGGTGGTTGTACTGAGCAGGGGGAGGTTTAAGCGCACAAAGACCGAGAAGCCCAAGGAGTCTCGGGTACCGAAAGTGAAAAAATTGACCGGAGCGGAGAGGGCACAATTGGAAAAGGAGAATGTGAGGGCTTCGAGGAAGAAGAAGTTTCTGGCCATGGCGAAGAAGGCGGTTGAGAGGTACCAGCGCGACCCGGATTACCAATTCTTGCACGAAAGGGTTTCGGATCTCTTCGCGGAGTGCTTGAAATCCGACATTGAGCACTTGAACTCGGATAAACAGCCCAAGAAGATCAGCCTTGCCGCGAAGTGGTGCCCTTCAATTGACTCCTCGTTCGATCGGGCAACTCTTATCTGCGAATGCATCGCGAAGAAGGTTTTCCCGCTAGAATCTTACATTGAGTATCAGGAATTGGAGGAGGAGCATTACGCGTACAGGGTTCGTGATAGGCTGAGAAAGGAGGTGTTGGTGCCCTTGAGGAAGGCGTTGGAGTTGCCGGAGGTTTATATGTCCGCCACTCAATGGGCGTTGATTCCCTACAATCGGGTGGCTTCCGTGGCCATGAAGCTTTACAAGGACAAGTTCTTGAAGCATGATCAAGAGCGGTTCGGAAAGTATTTGGCCGATGTGAAAGCTGGTAAGTCCACCATTGCGGCGGGTGCTCTGCTTCCGCACGAGATCATAGCCTCTCTGAATATTGACAGTTATATGGTGTATAGATACATGGATAGCGATGATGAGGATCGGGTTCAAGACGATGGGGGGTGTCAAGTGGCTGAGCTTCAGTGGAAGAGAATGGTGGATGACTTGTTGAAGCAGGGGAAGTTGAGGGATTCCTTGGCGGTTTGTGATGTCTCCGGAAGCATGAATGGAGACCCGATGGACGTGTCTGTGGCTTTGGGGCTTCTGTTGTCGGAATTGAGTGCAGATCCATGGAAAGGAAAGGTTATCACTTTCAGCGCGTCGCCTAAGCTGCATTTGATCGAAGGCGATGATCTCCGGGCCAAGTGTGCGTTCATGAGAGACATGGATTGGGGGGACAACACCAATTTCCAAAAGGTGTTTGATTTGCTTCTCGAGGTGGCCGTGAAGGGGAACTTGAAGCCGGAGGACATGATAAAAAGGGTGTTTGTGTTCAGCGACATGGAGTTTGATGAATCCTCGGCTGCAGGGAACGATTGGGAGACCGATTACGAGGCAATTAAAAGGAAGTTTGAAGAGAAAGGGTATGGGAACGCGGTGCCACAGATAGTGTTTTGGAATCTGAGGCACTCGGAGGCTACGCCTGCGCCTTCGAACCAACCTGGGGTGGCATTCTTGAGCGGATTCTCCAAGAACTTGATCAAGATGTTCATGGATAATGATGGGGAAATCCGCCCGGATCGCATCATGGAAGCAGCCATCTCCGGTGAAGAGTATCAGAGATTGGTTCTGGTGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

649

Amino Acids

73.54

Weight (kDa)

6.51

Isoelectric Point (pI)

37.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 44 - 444 1.6e-140 Domain of unknown function (DUF2828)
DUF7788 PF25043 446 - 626 5.5e-77 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 571, 684
AccB1I GGYRCC 6 cut(s) 302, 571, 684, 816, 973, 1744
AccB7I CCANNNNNTGG 2 cut(s) 487, 1026
AccBSI CCGCTC 3 cut(s) 599, 1108, 1827
AccIII TCCGGA 2 cut(s) 31, 1361
AclWI GGATC 5 cut(s) 463, 738, 1254, 1427, 1893
AcoI YGGCCR 4 cut(s) 657, 1062, 1125, 1587
AcsI RAATTY 1 cut(s) 43
AcuI CTGAAG 1 cut(s) 1271
AcyI GRCGYC 1 cut(s) 255
AdeI CACNNNGTG 1 cut(s) 196
AfaI GTAC 5 cut(s) 410, 516, 573, 686, 938
AfiI CCNNNNNNNGG 8 cut(s) 122, 487, 813, 1026, 1047, 1442, 1596, 1810
AflIII ACRYGT 2 cut(s) 933, 1389
AgsI TTSAA 8 cut(s) 751, 772, 825, 1093, 1256, 1318, 1606, 1721
AjiI CACGTC 2 cut(s) 193, 1390
AjnI CCWGG 2 cut(s) 372, 1807
AjuI GAANNNNNNNTTGG 2 cut(s) 1502, 1534
AluBI AGCT 7 cut(s) 37, 66, 232, 1072, 1139, 1285, 1477
AluI AGCT 7 cut(s) 37, 66, 232, 1072, 1139, 1285, 1477
Alw21I GWGCWC 3 cut(s) 39, 768, 1168
Alw26I GTCTC 6 cut(s) 160, 570, 1363, 1371, 1521, 1682
AlwI GGATC 5 cut(s) 463, 738, 1254, 1427, 1893
Ama87I CYCGRG 2 cut(s) 567, 1580
Aor13HI TCCGGA 2 cut(s) 31, 1361
AoxI GGCC 5 cut(s) 657, 1062, 1125, 1506, 1587
ApeKI GCWGC 5 cut(s) 338, 501, 1477, 1670, 1901
ApoI RAATTY 1 cut(s) 43
ArsI GACNNNNNNTTYG 4 cut(s) 821, 853, 1637, 1669
Asp700I GAANNNNTTC 1 cut(s) 881
Asp718I GGTACC 2 cut(s) 571, 684
AspLEI GCGC 6 cut(s) 143, 300, 540, 693, 1466, 1795
AspS9I GGNCC 5 cut(s) 26, 246, 418, 452, 1506
AsuC2I CCSGG 5 cut(s) 209, 425, 698, 1505, 1883
AsuHPI GGTGA 2 cut(s) 121, 1925
AsuII TTCGAA 1 cut(s) 1799
AvaI CYCGRG 2 cut(s) 567, 1580
AvaII GGWCC 4 cut(s) 26, 246, 418, 452
AxyI CCTNAGG 1 cut(s) 160
BaeGI GKGCMC 4 cut(s) 201, 610, 821, 978
BalI TGGCCA 2 cut(s) 659, 1064
BanI GGYRCC 6 cut(s) 302, 571, 684, 816, 973, 1744
BanII GRGCYC 1 cut(s) 39
BauI CACGAG 1 cut(s) 1178
BbsI GAAGAC 1 cut(s) 8
Bbv12I GWGCWC 3 cut(s) 39, 768, 1168
BbvI GCAGC 5 cut(s) 325, 513, 1464, 1657, 1913
BccI CCATC 5 cut(s) 115, 1256, 1378, 1862, 1913
BceAI ACGGC 3 cut(s) 106, 154, 1574
BciT130I CCWGG 2 cut(s) 374, 1809
BclI TGATCA 2 cut(s) 1099, 1845
BcnI CCSGG 5 cut(s) 209, 425, 698, 1505, 1883
BcoDI GTCTC 6 cut(s) 160, 570, 1363, 1371, 1521, 1682
BfaI CTAG 2 cut(s) 446, 890
BfmI CTRYAG 1 cut(s) 1671
BlpI GCTNAGC 1 cut(s) 1281
Bme1390I CCNGG 7 cut(s) 209, 374, 425, 698, 1505, 1809, 1883
Bme18I GGWCC 4 cut(s) 26, 246, 418, 452
BmeT110I CYCGRG 2 cut(s) 567, 1580
BmgBI CACGTC 2 cut(s) 193, 1390
BmgT120I GGNCC 5 cut(s) 26, 246, 418, 452, 1506
BmiI GGNNCC 9 cut(s) 6, 248, 304, 350, 573, 686, 818, 975, 1746
BmrFI CCNGG 7 cut(s) 209, 374, 425, 698, 1505, 1809, 1883
BmsI GCATC 4 cut(s) 67, 221, 876, 1899
BpiI GAAGAC 1 cut(s) 8
Bpu10I CCTNAGC 1 cut(s) 1473
Bpu1102I GCTNAGC 1 cut(s) 1281
Bpu14I TTCGAA 1 cut(s) 1799
BpuEI CTTGAG 2 cut(s) 1000, 1843
BpuMI CCSGG 5 cut(s) 209, 425, 698, 1505, 1883
BsaBI GATNNNNATC 1 cut(s) 1245
BsaHI GRCGYC 1 cut(s) 255
BsaI GGTCTC 2 cut(s) 1371, 1682
BsaWI WCCGGW 5 cut(s) 31, 305, 593, 1361, 1910
BsaXI ACNNNNNCTCC 2 cut(s) 392, 422
Bsc4I CCNNNNNNNGG 8 cut(s) 122, 487, 813, 1026, 1047, 1442, 1596, 1810
Bse118I RCCGGY 2 cut(s) 107, 438
Bse1I ACTGG 2 cut(s) 71, 481
Bse21I CCTNAGG 1 cut(s) 160
Bse3DI GCAATG 1 cut(s) 1152
Bse8I GATNNNNATC 1 cut(s) 1245
BseAI TCCGGA 2 cut(s) 31, 1361
BseBI CCWGG 2 cut(s) 374, 1809
BseGI GGATG 3 cut(s) 82, 212, 1312
BseJI GATNNNNATC 1 cut(s) 1245
BseLI CCNNNNNNNGG 8 cut(s) 122, 487, 813, 1026, 1047, 1442, 1596, 1810
BseMI GCAATG 1 cut(s) 1152
BseMII CTCAG 5 cut(s) 174, 509, 947, 1272, 1760
BseNI ACTGG 2 cut(s) 71, 481
BseRI GAGGAG 4 cut(s) 148, 823, 935, 938
BseSI GKGCMC 4 cut(s) 201, 610, 821, 978
BseXI GCAGC 5 cut(s) 325, 513, 1464, 1657, 1913
BsgI GTGCAG 1 cut(s) 1449
Bsh1285I CGRYCG 1 cut(s) 844
BshFI GGCC 5 cut(s) 659, 1064, 1127, 1508, 1589
BshNI GGYRCC 6 cut(s) 302, 571, 684, 816, 973, 1744
BsiEI CGRYCG 1 cut(s) 844
BsiHKAI GWGCWC 3 cut(s) 39, 768, 1168
BsiHKCI CYCGRG 2 cut(s) 567, 1580
BslFI GGGAC 2 cut(s) 232, 1556
BslI CCNNNNNNNGG 8 cut(s) 122, 487, 813, 1026, 1047, 1442, 1596, 1810
BsmAI GTCTC 6 cut(s) 160, 570, 1363, 1371, 1521, 1682
BsmBI CGTCTC 1 cut(s) 160
BsmFI GGGAC 2 cut(s) 232, 1556
BsmI GAATGC 2 cut(s) 869, 1817
BsnI GGCC 5 cut(s) 659, 1064, 1127, 1508, 1589
Bso31I GGTCTC 2 cut(s) 1371, 1682
BsoBI CYCGRG 2 cut(s) 567, 1580
Bsp119I TTCGAA 1 cut(s) 1799
Bsp1286I GDGCHC 7 cut(s) 39, 201, 610, 768, 821, 978, 1168
Bsp13I TCCGGA 2 cut(s) 31, 1361
Bsp1720I GCTNAGC 1 cut(s) 1281
Bsp19I CCATGG 2 cut(s) 660, 1436
Bsp68I TCGCGA 1 cut(s) 872
BspANI GGCC 5 cut(s) 659, 1064, 1127, 1508, 1589
BspCNI CTCAG 5 cut(s) 173, 510, 948, 1273, 1761
BspEI TCCGGA 2 cut(s) 31, 1361
BspHI TCATGA 1 cut(s) 1521
BspLI GGNNCC 9 cut(s) 6, 248, 304, 350, 573, 686, 818, 975, 1746
BspMAI CTGCAG 1 cut(s) 1675
BspPI GGATC 5 cut(s) 463, 738, 1254, 1427, 1893
BspQI GCTCTTC 2 cut(s) 470, 491
BspT104I TTCGAA 1 cut(s) 1799
BspT107I GGYRCC 6 cut(s) 302, 571, 684, 816, 973, 1744
BspTNI GGTCTC 2 cut(s) 1371, 1682
BsrBI CCGCTC 3 cut(s) 599, 1108, 1827
BsrDI GCAATG 1 cut(s) 1152
BsrFI RCCGGY 2 cut(s) 107, 438
BsrI ACTGG 2 cut(s) 71, 481
BssAI RCCGGY 2 cut(s) 107, 438
BssNI GRCGYC 1 cut(s) 255
BssSI CACGAG 1 cut(s) 1178
BssT1I CCWWGG 4 cut(s) 558, 660, 1341, 1436
Bst2BI CACGAG 1 cut(s) 1178
Bst2UI CCWGG 2 cut(s) 374, 1809
Bst4CI ACNGT 1 cut(s) 1208
Bst6I CTCTTC 8 cut(s) 188, 392, 470, 491, 740, 1289, 1716, 1911
BstACI GRCGYC 1 cut(s) 255
BstAPI GCANNNNNTGC 1 cut(s) 171
BstBI TTCGAA 1 cut(s) 1799
BstC8I GCNNGC 4 cut(s) 240, 296, 379, 1791
BstDEI CTNAG 6 cut(s) 160, 518, 956, 1281, 1473, 1769
BstDSI CCRYGG 4 cut(s) 289, 660, 1059, 1436
BstF5I GGATG 3 cut(s) 82, 212, 1312
BstHHI GCGC 6 cut(s) 143, 300, 540, 693, 1466, 1795
BstMAI GTCTC 6 cut(s) 160, 570, 1363, 1371, 1521, 1682
BstMCI CGRYCG 1 cut(s) 844
BstNI CCWGG 2 cut(s) 374, 1809
BstSCI CCNGG 7 cut(s) 207, 372, 423, 696, 1503, 1807, 1881
BstSFI CTRYAG 1 cut(s) 1671
BstSLI GKGCMC 4 cut(s) 201, 610, 821, 978
BstV1I GCAGC 5 cut(s) 325, 513, 1464, 1657, 1913
BstV2I GAAGAC 1 cut(s) 8
BstX2I RGATCY 2 cut(s) 730, 1432
BstXI CCANNNNNNTGG 1 cut(s) 373
BstYI RGATCY 2 cut(s) 730, 1432
Bsu36I CCTNAGG 1 cut(s) 160
BsuRI GGCC 5 cut(s) 659, 1064, 1127, 1508, 1589
BtgI CCRYGG 4 cut(s) 289, 660, 1059, 1436
BtgZI GCGATG 3 cut(s) 853, 1251, 1509
BtrI CACGTC 2 cut(s) 193, 1390
BtsCI GGATG 3 cut(s) 82, 212, 1312
BtsIMutI CAGTG 3 cut(s) 78, 488, 1295
BtuMI TCGCGA 1 cut(s) 872
Cac8I GCNNGC 4 cut(s) 240, 296, 379, 1791
CciI TCATGA 1 cut(s) 1521
CfoI GCGC 6 cut(s) 143, 300, 540, 693, 1466, 1795
Cfr10I RCCGGY 2 cut(s) 107, 438
Cfr13I GGNCC 5 cut(s) 26, 246, 418, 452, 1506
Cfr42I CCGCGG 1 cut(s) 292
CseI GACGC 2 cut(s) 263, 1455
Csp6I GTAC 5 cut(s) 409, 515, 572, 685, 937
CviQI GTAC 5 cut(s) 409, 515, 572, 685, 937
DdeI CTNAG 6 cut(s) 160, 518, 956, 1281, 1473, 1769
DraIII CACNNNGTG 1 cut(s) 196
EaeI YGGCCR 4 cut(s) 657, 1062, 1125, 1587
Eam1104I CTCTTC 8 cut(s) 188, 392, 470, 491, 740, 1289, 1716, 1911
EarI CTCTTC 8 cut(s) 188, 392, 470, 491, 740, 1289, 1716, 1911
EciI GGCGGA 2 cut(s) 1006, 1868
Ecl136II GAGCTC 1 cut(s) 37
Eco130I CCWWGG 4 cut(s) 558, 660, 1341, 1436
Eco24I GRGCYC 1 cut(s) 39
Eco31I GGTCTC 2 cut(s) 1371, 1682
Eco47I GGWCC 4 cut(s) 26, 246, 418, 452
Eco53kI GAGCTC 1 cut(s) 37
Eco57I CTGAAG 1 cut(s) 1271
Eco81I CCTNAGG 1 cut(s) 160
Eco88I CYCGRG 2 cut(s) 567, 1580
EcoICRI GAGCTC 1 cut(s) 37
EcoO109I RGGNCCY 1 cut(s) 418
EcoRII CCWGG 2 cut(s) 372, 1807
EcoT14I CCWWGG 4 cut(s) 558, 660, 1341, 1436
EcoT22I ATGCAT 1 cut(s) 869
EcoT38I GRGCYC 1 cut(s) 39
ErhI CCWWGG 4 cut(s) 558, 660, 1341, 1436
Esp3I CGTCTC 1 cut(s) 160
FalI AAGNNNNNCTT 4 cut(s) 311, 343, 1586, 1618
FaqI GGGAC 2 cut(s) 232, 1556
FauI CCCGC 3 cut(s) 243, 894, 1153
FbaI TGATCA 2 cut(s) 1099, 1845
FokI GGATG 3 cut(s) 89, 199, 1319
FriOI GRGCYC 1 cut(s) 39
FspBI CTAG 2 cut(s) 446, 890
GlaI GCGC 6 cut(s) 142, 299, 539, 692, 1465, 1794
HaeIII GGCC 5 cut(s) 659, 1064, 1127, 1508, 1589
HgaI GACGC 2 cut(s) 263, 1455
HhaI GCGC 6 cut(s) 143, 300, 540, 693, 1466, 1795
Hin1I GRCGYC 1 cut(s) 255
Hin6I GCGC 6 cut(s) 141, 298, 538, 691, 1464, 1793
HinP1I GCGC 6 cut(s) 141, 298, 538, 691, 1464, 1793
HindIII AAGCTT 1 cut(s) 1070
HphI GGTGA 2 cut(s) 121, 1925
Hpy166II GTNNAC 2 cut(s) 1149, 1942
Hpy8I GTNNAC 2 cut(s) 1149, 1942
Hpy99I CGWCG 3 cut(s) 197, 257, 1471
HpyAV CCTTC 9 cut(s) 160, 443, 664, 831, 871, 979, 1484, 1588, 1806
HpyCH4III ACNGT 1 cut(s) 1208
HpyCH4IV ACGT 3 cut(s) 192, 459, 1389
HpyCH4V TGCA 7 cut(s) 282, 381, 715, 867, 1430, 1480, 1673
HpyF3I CTNAG 6 cut(s) 160, 518, 956, 1281, 1473, 1769
HpySE526I ACGT 3 cut(s) 192, 459, 1389
Hsp92I GRCGYC 1 cut(s) 255
HspAI GCGC 6 cut(s) 141, 298, 538, 691, 1464, 1793
Kpn2I TCCGGA 2 cut(s) 31, 1361
KpnI GGTACC 2 cut(s) 575, 688
Ksp22I TGATCA 2 cut(s) 1099, 1845
KspI CCGCGG 1 cut(s) 292
LguI GCTCTTC 2 cut(s) 470, 491
LmnI GCTCC 6 cut(s) 10, 34, 237, 354, 596, 925
Lsp1109I GCAGC 5 cut(s) 325, 513, 1464, 1657, 1913
LweI GCATC 4 cut(s) 67, 221, 876, 1899
MaeI CTAG 2 cut(s) 446, 890
MaeII ACGT 3 cut(s) 192, 459, 1389
MbiI CCGCTC 3 cut(s) 599, 1108, 1827
MfeI CAATTG 2 cut(s) 611, 825
MflI RGATCY 2 cut(s) 730, 1432
MhlI GDGCHC 7 cut(s) 39, 201, 610, 768, 821, 978, 1168
MlsI TGGCCA 2 cut(s) 659, 1064
MluCI AATT 9 cut(s) 43, 587, 611, 707, 825, 914, 1421, 1552, 1704
MluI ACGCGT 1 cut(s) 933
MluNI TGGCCA 2 cut(s) 659, 1064
MlyI GAGTC 2 cut(s) 572, 824
MmeI TCCRAC 4 cut(s) 468, 780, 972, 1398
Mox20I TGGCCA 2 cut(s) 659, 1064
Mph1103I ATGCAT 1 cut(s) 869
MroI TCCGGA 2 cut(s) 31, 1361
MroXI GAANNNNTTC 1 cut(s) 881
MscI TGGCCA 2 cut(s) 659, 1064
MseI TTAA 3 cut(s) 414, 534, 1707
Msp20I TGGCCA 2 cut(s) 659, 1064
MspA1I CMGCKG 2 cut(s) 238, 291
MspR9I CCNGG 7 cut(s) 209, 374, 425, 698, 1505, 1809, 1883
MunI CAATTG 2 cut(s) 611, 825
Mva1269I GAATGC 2 cut(s) 869, 1817
MvaI CCWGG 2 cut(s) 374, 1809
NciI CCSGG 5 cut(s) 209, 425, 698, 1505, 1883
NcoI CCATGG 2 cut(s) 660, 1436
NlaIV GGNNCC 9 cut(s) 6, 248, 304, 350, 573, 686, 818, 975, 1746
NmeAIII GCCGAG 1 cut(s) 1646
NruI TCGCGA 1 cut(s) 872
NsiI ATGCAT 1 cut(s) 869
NspV TTCGAA 1 cut(s) 1799
PaeR7I CTCGAG 1 cut(s) 1580
PagI TCATGA 1 cut(s) 1521
PciSI GCTCTTC 2 cut(s) 470, 491
PcsI WCGNNNNNNNCGW 2 cut(s) 198, 1587
PctI GAATGC 2 cut(s) 869, 1817
PdmI GAANNNNTTC 1 cut(s) 881
PfeI GAWTC 8 cut(s) 59, 430, 893, 1036, 1337, 1661, 1765, 1830
PflMI CCANNNNNTGG 2 cut(s) 487, 1026
PfoI TCCNGGA 1 cut(s) 423
Ple19I CGATCG 1 cut(s) 844
PleI GAGTC 2 cut(s) 571, 824
PpsI GAGTC 2 cut(s) 571, 824
PpuMI RGGWCCY 1 cut(s) 418
Psp124BI GAGCTC 1 cut(s) 39
Psp5II RGGWCCY 1 cut(s) 418
Psp6I CCWGG 2 cut(s) 372, 1807
PspGI CCWGG 2 cut(s) 372, 1807
PspN4I GGNNCC 9 cut(s) 6, 248, 304, 350, 573, 686, 818, 975, 1746
PspPI GGNCC 5 cut(s) 26, 246, 418, 452, 1506
PspPPI RGGWCCY 1 cut(s) 418
PstI CTGCAG 1 cut(s) 1675
PsuI RGATCY 2 cut(s) 730, 1432
PvuI CGATCG 1 cut(s) 844
RruI TCGCGA 1 cut(s) 872
RsaI GTAC 5 cut(s) 410, 516, 573, 686, 938
RsaNI GTAC 5 cut(s) 409, 515, 572, 685, 937
SacI GAGCTC 1 cut(s) 39
SacII CCGCGG 1 cut(s) 292
SapI GCTCTTC 2 cut(s) 470, 491
SaqAI TTAA 3 cut(s) 414, 534, 1707
Sau96I GGNCC 5 cut(s) 26, 246, 418, 452, 1506
SchI GAGTC 2 cut(s) 572, 824
ScrFI CCNGG 7 cut(s) 209, 374, 425, 698, 1505, 1809, 1883
SduI GDGCHC 7 cut(s) 39, 201, 610, 768, 821, 978, 1168
SfaNI GCATC 4 cut(s) 67, 221, 876, 1899
SfcI CTRYAG 1 cut(s) 1671
Sfr274I CTCGAG 1 cut(s) 1580
Sfr303I CCGCGG 1 cut(s) 292
SfuI TTCGAA 1 cut(s) 1799
SgrBI CCGCGG 1 cut(s) 292
SinI GGWCC 4 cut(s) 26, 246, 418, 452
SlaI CTCGAG 1 cut(s) 1580
SmlI CTYRAG 3 cut(s) 979, 1580, 1822
SmoI CTYRAG 3 cut(s) 979, 1580, 1822
Sse9I AATT 9 cut(s) 43, 587, 611, 707, 825, 914, 1421, 1552, 1704
SspI AATATT 1 cut(s) 1201
SspMI CTAG 2 cut(s) 446, 890
SstI GAGCTC 1 cut(s) 39
StyD4I CCNGG 7 cut(s) 207, 372, 423, 696, 1503, 1807, 1881
StyI CCWWGG 4 cut(s) 558, 660, 1341, 1436
TaaI ACNGT 1 cut(s) 1208
TaiI ACGT 3 cut(s) 195, 462, 1392
TaqI TCGA 6 cut(s) 177, 638, 840, 1488, 1581, 1799
TaqII GACCGA 2 cut(s) 563, 1706
TasI AATT 9 cut(s) 43, 587, 611, 707, 825, 914, 1421, 1552, 1704
TatI WGTACW 1 cut(s) 514
TauI GCSGC 5 cut(s) 96, 294, 303, 809, 1160
TfiI GAWTC 8 cut(s) 59, 430, 893, 1036, 1337, 1661, 1765, 1830
Tru1I TTAA 3 cut(s) 414, 534, 1707
Tru9I TTAA 3 cut(s) 414, 534, 1707
TscAI CASTG 3 cut(s) 78, 488, 1295
TseI GCWGC 5 cut(s) 338, 501, 1477, 1670, 1901
TspDTI ATGAA 5 cut(s) 1082, 1385, 1510, 1674, 1846
TspGWI ACGGA 1 cut(s) 1048
TspRI CASTG 3 cut(s) 78, 488, 1295
Van91I CCANNNNNTGG 2 cut(s) 487, 1026
VpaK11BI GGWCC 4 cut(s) 26, 246, 418, 452
XapI RAATTY 1 cut(s) 43
XbaI TCTAGA 1 cut(s) 445
XcmI CCANNNNNNNNNTGG 1 cut(s) 70
XhoI CTCGAG 1 cut(s) 1580
XmnI GAANNNNTTC 1 cut(s) 881
XspI CTAG 2 cut(s) 446, 890
Zsp2I ATGCAT 1 cut(s) 869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.