Rh7DG070800

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000255
Physical Location & Seq
Reverse (-)
5440300 .. 5447348
7049 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG070800.1

Sequence Viewer

Length: 2019 bp
ATGGCTCTTCTTCTCGGTCCTCCATCCCTCAGGCAATCCCCAACCCCGGCGGCCCAACAACCACAGGCCCAAGCCCCCTCCGGCGACCCATTCATCGACCTCATGGTCGCCGATTACAACAACCTGGCCCAGCCTCCGATCACCAGGCCTCAAATGGGCTTCACCGAGAACGGCTCAGCCACATTCGTCACCACCGGCGATCCTTGCCTCGATCTCTTCTTCCACGTCGTCCCCAACACTCCGGCGTCGTATCTGAACCAGCAGCTCCCTCTGGCCTGGGCCCACAACGCCCTCACCACCCTCAAGCTCATCTGCAACCTCCGCGGCGTACGTGGCACCGGCAAGTCTGACAAAGAAGGATTCTACACGGCGGCGTTTTGGCTCCACAAGAACCACCCCAAAACCCTAGCCTGCAACGTCGCCTCCCTCGCCGAGTTCGGGTATTTCAAGGACCTGCCGGAGATTCTGTACCGCCTTCTAGAAGGCCAGGACGTGAGGGAGAAGCAAAAGATGGATTGGCAGTGCCGAAAACGGACTATTCGGAGGCTGGTTGGCCGAGTTAGTATTGGACGCCGGAGGGTCAGACGTGGCGGTTGTGCTAAATTGAATAAATCAAAGCAGGTCGGCAAGCCCAAAGCTGTCAGCCGGCAGAAGTTGCCTAAGGATGTAAGGGAAAAGATGGCGGCAGAGAAGCGGAGATTGGAGAAGGAGAAAGTGAGTGCAGCGAGGCTGGAGAAGAAGATTGCGATGGCTAAGAAGGCGGTTGCAAGGTACCAGCGTGACCCGGATTACAGATTCTTGCATGACAGGGTTTCGGATCTTTTCGCTGACTGCTTGAAATATGATATGGAGAGTCTCAAGAACAACAATACTAACACGATAGGCCTGGCGGCAAAGTGGTGTCCTTCGCTTGATTCTTCGTTTGATCGAGCCACATTGCTCTGCGAAAGCATTGCGAGGAAGATTTTCACCCGAGAATTGTATCCGGAATATGAAGGAGTTGAGGATGCACATTATGCTTACAGAGTCCGAGACCGGCTGAGGAAGGAGGTGTTGGTGCCATTGAGGAAGGTGTTGCAGCTGCCGGAGGTTTATATGGGTGCCAACAAGTGGGGGGAGATTCCCTACAAGAGAGTGGCCTCAGTGGCCATGAAGCTTTACAAGGGGAAGTTCTTGAAGCACGATGAAGAGAGGTTTAAGAAGTATTTGGAGGATGTGAAAGCCGGGAAGGCCACTATTGCCGCTGGTGCTCTGCTTCCACATGAGATCATAGCCTCTCTGAACGATGAGGATGGTGGGGAAGTGGGTGAGCTTCAGTGGAAGAGAATGGTGGAGGACCTGGTGGAGCTTGGCAAGTTGAGGAATTGCATGGCTGTGTGTGACGTGTCCGGAAGCATGGAAGGGACTCCTATGGAGGTGTGTGTGGCTTTGGGGCTGTTGGTGTCGGAATTGAGTGAAGAGCCATGGAAAGGAAAGGTGATCACTTTCAGTCAGAACCCTCAGTTGCATTTGATTCAAGGCGACGATCTTAGCTCCAAGTGCGAGTTTGTGAGGAGGATGGAATGGGGGATGAACACTGATTTACAAAAGGTGTTTGATCTGATTCTCCAAGTGGCTGTGAAGGGGAAGTTGAAGCCGGAGCAGATGATAAAGAGGGTGTTTGTGTTCAGCGACATGGAGTTTGATGAGGCTTCGGGGCATAGGGGATATGGATATGGGTATTATGGAAGGGAGGATAATGAGCCCCAGAGCTGGGAGACCGATTATGAGGTGATACAGAGAAAGTATAAGGAAAATGGGTATGGTGATGCGGTGCCTCAGATCGTGTTTTGGAATCTCAGGGACTCAGGGTCTACACCGGTGACTGCAACAACACCAGGGGTGGCTCTGTTGAGTGGCTTCTCCAAGAATGCCCTCAAGATGTTCTTGAATGATGATATTGAGCAAATTCAGCCGGATATTGTCATGGAAGCTGCCATCTCCGGCGAGGAGTATCAAAGGCTGGTGTTGGTTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

672

Amino Acids

76.14

Weight (kDa)

8.84

Isoelectric Point (pI)

40.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 55 - 453 3.7e-138 Domain of unknown function (DUF2828)
DUF7788 PF25043 455 - 649 6.1e-81 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 104
Acc36I ACCTGC 2 cut(s) 462, 610
Acc65I GGTACC 1 cut(s) 771
AccB1I GGYRCC 5 cut(s) 335, 771, 1057, 1100, 1813
AccB7I CCANNNNNTGG 1 cut(s) 1110
AccI GTMKAC 1 cut(s) 1853
AccII CGCG 1 cut(s) 324
AccIII TCCGGA 2 cut(s) 985, 1388
AclWI GGATC 2 cut(s) 194, 825
AcoI YGGCCR 2 cut(s) 553, 1146
AcsI RAATTY 1 cut(s) 1947
AcuI CTGAAG 1 cut(s) 1298
AcyI GRCGYC 2 cut(s) 245, 571
AfaI GTAC 3 cut(s) 330, 470, 773
AfiI CCNNNNNNNGG 7 cut(s) 46, 155, 438, 1110, 1469, 1752, 1753
AflIII ACRYGT 1 cut(s) 1383
AgeI ACCGGT 1 cut(s) 1858
AgsI TTSAA 7 cut(s) 448, 607, 838, 1177, 1517, 1633, 1930
AhdI GACNNNNNGTC 1 cut(s) 1849
AjiI CACGTC 4 cut(s) 226, 493, 587, 1384
AjnI CCWGG 7 cut(s) 123, 143, 275, 486, 885, 1338, 1876
AjuI GAANNNNNNNTTGG 4 cut(s) 683, 715, 1037, 1069
Alw21I GWGCWC 1 cut(s) 1252
Alw26I GTCTC 3 cut(s) 860, 1026, 1751
AlwI GGATC 2 cut(s) 194, 825
Ama87I CYCGRG 1 cut(s) 972
Aor13HI TCCGGA 2 cut(s) 985, 1388
ApaI GGGCCC 1 cut(s) 283
ApeKI GCWGC 5 cut(s) 262, 722, 1078, 1081, 1973
ApoI RAATTY 1 cut(s) 1947
ArsI GACNNNNNNTTYG 2 cut(s) 1664, 1696
AsiGI ACCGGT 1 cut(s) 1858
Asp700I GAANNNNTTC 1 cut(s) 965
Asp718I GGTACC 1 cut(s) 771
AspS9I GGNCC 8 cut(s) 17, 52, 67, 127, 279, 280, 451, 1336
AsuC2I CCSGG 3 cut(s) 47, 785, 1225
AvaI CYCGRG 1 cut(s) 972
AvaII GGWCC 3 cut(s) 17, 451, 1336
AxyI CCTNAGG 2 cut(s) 29, 660
BaeGI GKGCMC 1 cut(s) 283
BaeI ACNNNNGTAYC 2 cut(s) 763, 796
BalI TGGCCA 1 cut(s) 1148
BanI GGYRCC 5 cut(s) 335, 771, 1057, 1100, 1813
BanII GRGCYC 2 cut(s) 283, 1746
Bbv12I GWGCWC 1 cut(s) 1252
BbvCI CCTCAGC 1 cut(s) 1040
BbvI GCAGC 5 cut(s) 274, 734, 1068, 1090, 1960
BccI CCATC 7 cut(s) 31, 505, 673, 742, 1286, 1552, 1985
BceAI ACGGC 2 cut(s) 187, 384
BcgI CGANNNNNNTGC 2 cut(s) 935, 969
BciT130I CCWGG 7 cut(s) 125, 145, 277, 488, 887, 1340, 1878
BciVI GTATCC 1 cut(s) 993
BclI TGATCA 1 cut(s) 1479
BcnI CCSGG 3 cut(s) 47, 785, 1225
BcoDI GTCTC 3 cut(s) 860, 1026, 1751
BfaI CTAG 2 cut(s) 407, 479
BfuAI ACCTGC 2 cut(s) 462, 610
BfuI GTATCC 1 cut(s) 993
BglI GCCNNNNNGGC 2 cut(s) 1145, 1229
BlpI GCTNAGC 1 cut(s) 175
Bme18I GGWCC 3 cut(s) 17, 451, 1336
BmeRI GACNNNNNGTC 1 cut(s) 1849
BmeT110I CYCGRG 1 cut(s) 972
BmgBI CACGTC 4 cut(s) 226, 493, 587, 1384
BmgT120I GGNCC 8 cut(s) 17, 52, 67, 127, 279, 280, 451, 1336
BmiI GGNNCC 7 cut(s) 281, 337, 383, 773, 1059, 1102, 1815
BmsI GCATC 2 cut(s) 997, 1798
BplI GAGNNNNNCTC 2 cut(s) 158, 190
BpmI CTGGAG 1 cut(s) 752
Bpu10I CCTNAGC 1 cut(s) 1040
Bpu1102I GCTNAGC 1 cut(s) 175
BpuEI CTTGAG 3 cut(s) 287, 842, 1901
BpuMI CCSGG 3 cut(s) 47, 785, 1225
BsaAI YACGTR 1 cut(s) 332
BsaHI GRCGYC 2 cut(s) 245, 571
BsaI GGTCTC 2 cut(s) 1026, 1751
BsaJI CCNNGG 5 cut(s) 45, 276, 322, 1463, 1877
BsaWI WCCGGW 3 cut(s) 985, 1388, 1858
BsaXI ACNNNNNCTCC 4 cut(s) 407, 437, 452, 482
Bsc4I CCNNNNNNNGG 7 cut(s) 46, 155, 438, 1110, 1469, 1752, 1753
Bse118I RCCGGY 5 cut(s) 194, 338, 645, 1035, 1858
Bse21I CCTNAGG 2 cut(s) 29, 660
Bse3DI GCAATG 2 cut(s) 935, 951
BseAI TCCGGA 2 cut(s) 985, 1388
BseBI CCWGG 7 cut(s) 125, 145, 277, 488, 887, 1340, 1878
BseDI CCNNGG 5 cut(s) 45, 276, 322, 1463, 1877
BseGI GGATG 7 cut(s) 23, 670, 1012, 1219, 1297, 1563, 1575
BseLI CCNNNNNNNGG 7 cut(s) 46, 155, 438, 1110, 1469, 1752, 1753
BseMI GCAATG 2 cut(s) 935, 951
BseMII CTCAG 8 cut(s) 43, 189, 1031, 1155, 1514, 1832, 1852, 1860
BseRI GAGGAG 2 cut(s) 1567, 2003
BseSI GKGCMC 1 cut(s) 283
BseXI GCAGC 5 cut(s) 274, 734, 1068, 1090, 1960
BseYI CCCAGC 2 cut(s) 129, 1752
BsgI GTGCAG 1 cut(s) 741
Bsh1236I CGCG 1 cut(s) 324
BshNI GGYRCC 5 cut(s) 335, 771, 1057, 1100, 1813
BshTI ACCGGT 1 cut(s) 1858
BsiHKAI GWGCWC 1 cut(s) 1252
BsiHKCI CYCGRG 1 cut(s) 972
BsiWI CGTACG 1 cut(s) 328
BslFI GGGAC 3 cut(s) 215, 1417, 1856
BslI CCNNNNNNNGG 7 cut(s) 46, 155, 438, 1110, 1469, 1752, 1753
BsmAI GTCTC 3 cut(s) 860, 1026, 1751
BsmFI GGGAC 3 cut(s) 215, 1417, 1856
BsmI GAATGC 1 cut(s) 1915
Bso31I GGTCTC 2 cut(s) 1026, 1751
BsoBI CYCGRG 1 cut(s) 972
Bsp120I GGGCCC 1 cut(s) 279
Bsp1286I GDGCHC 3 cut(s) 283, 1252, 1746
Bsp13I TCCGGA 2 cut(s) 985, 1388
Bsp1720I GCTNAGC 1 cut(s) 175
Bsp19I CCATGG 1 cut(s) 1463
BspCNI CTCAG 8 cut(s) 42, 188, 1032, 1154, 1513, 1831, 1851, 1859
BspEI TCCGGA 2 cut(s) 985, 1388
BspFNI CGCG 1 cut(s) 324
BspLI GGNNCC 7 cut(s) 281, 337, 383, 773, 1059, 1102, 1815
BspMI ACCTGC 2 cut(s) 462, 610
BspPI GGATC 2 cut(s) 194, 825
BspQI GCTCTTC 2 cut(s) 12, 1452
BspT107I GGYRCC 5 cut(s) 335, 771, 1057, 1100, 1813
BspTNI GGTCTC 2 cut(s) 1026, 1751
BsrDI GCAATG 2 cut(s) 935, 951
BsrFI RCCGGY 5 cut(s) 194, 338, 645, 1035, 1858
BssAI RCCGGY 5 cut(s) 194, 338, 645, 1035, 1858
BssECI CCNNGG 5 cut(s) 45, 276, 322, 1463, 1877
BssNI GRCGYC 2 cut(s) 245, 571
BssT1I CCWWGG 1 cut(s) 1463
Bst2UI CCWGG 7 cut(s) 125, 145, 277, 488, 887, 1340, 1878
Bst6I CTCTTC 5 cut(s) 12, 221, 1182, 1316, 1452
BstACI GRCGYC 2 cut(s) 245, 571
BstAPI GCANNNNNTGC 2 cut(s) 655, 1016
BstBAI YACGTR 1 cut(s) 332
BstC8I GCNNGC 3 cut(s) 412, 629, 647
BstDSI CCRYGG 2 cut(s) 322, 1463
BstF5I GGATG 7 cut(s) 23, 670, 1012, 1219, 1297, 1563, 1575
BstFNI CGCG 1 cut(s) 324
BstMAI GTCTC 3 cut(s) 860, 1026, 1751
BstNI CCWGG 7 cut(s) 125, 145, 277, 488, 887, 1340, 1878
BstSLI GKGCMC 1 cut(s) 283
BstUI CGCG 1 cut(s) 324
BstV1I GCAGC 5 cut(s) 274, 734, 1068, 1090, 1960
BstX2I RGATCY 1 cut(s) 817
BstYI RGATCY 1 cut(s) 817
Bsu36I CCTNAGG 2 cut(s) 29, 660
BsuI GTATCC 1 cut(s) 993
BtgI CCRYGG 2 cut(s) 322, 1463
BtgZI GCGATG 1 cut(s) 761
BtrI CACGTC 4 cut(s) 226, 493, 587, 1384
BtsCI GGATG 7 cut(s) 23, 670, 1012, 1219, 1297, 1563, 1575
BtsI GCAGTG 1 cut(s) 527
BtsIMutI CAGTG 4 cut(s) 527, 1149, 1322, 1575
BveI ACCTGC 2 cut(s) 462, 610
Cac8I GCNNGC 3 cut(s) 412, 629, 647
Cfr10I RCCGGY 5 cut(s) 194, 338, 645, 1035, 1858
Cfr13I GGNCC 8 cut(s) 17, 52, 67, 127, 279, 280, 451, 1336
Cfr42I CCGCGG 1 cut(s) 325
CseI GACGC 2 cut(s) 234, 579
CsiI ACCWGGT 1 cut(s) 1338
Csp6I GTAC 3 cut(s) 329, 469, 772
CspAI ACCGGT 1 cut(s) 1858
CviAII CATG 9 cut(s) 103, 803, 1150, 1262, 1369, 1396, 1464, 1675, 1966
CviQI GTAC 3 cut(s) 329, 469, 772
DrdI GACNNNNNNGTC 1 cut(s) 104
DriI GACNNNNNGTC 1 cut(s) 1849
DseDI GACNNNNNNGTC 1 cut(s) 104
EaeI YGGCCR 2 cut(s) 553, 1146
Eam1104I CTCTTC 5 cut(s) 12, 221, 1182, 1316, 1452
Eam1105I GACNNNNNGTC 1 cut(s) 1849
EarI CTCTTC 5 cut(s) 12, 221, 1182, 1316, 1452
Eco130I CCWWGG 1 cut(s) 1463
Eco147I AGGCCT 2 cut(s) 148, 885
Eco24I GRGCYC 2 cut(s) 283, 1746
Eco31I GGTCTC 2 cut(s) 1026, 1751
Eco47I GGWCC 3 cut(s) 17, 451, 1336
Eco57I CTGAAG 1 cut(s) 1298
Eco81I CCTNAGG 2 cut(s) 29, 660
Eco88I CYCGRG 1 cut(s) 972
EcoO109I RGGNCCY 2 cut(s) 451, 1336
EcoRII CCWGG 7 cut(s) 123, 143, 275, 486, 885, 1338, 1876
EcoT14I CCWWGG 1 cut(s) 1463
EcoT38I GRGCYC 2 cut(s) 283, 1746
ErhI CCWWGG 1 cut(s) 1463
FaeI CATG 9 cut(s) 106, 806, 1153, 1265, 1372, 1399, 1467, 1678, 1969
FalI AAGNNNNNCTT 2 cut(s) 1910, 1942
FaqI GGGAC 3 cut(s) 215, 1417, 1856
FatI CATG 9 cut(s) 102, 802, 1149, 1261, 1368, 1395, 1463, 1674, 1965
FbaI TGATCA 1 cut(s) 1479
FblI GTMKAC 1 cut(s) 1853
FokI GGATG 7 cut(s) 10, 677, 1019, 1226, 1304, 1570, 1582
FriOI GRGCYC 2 cut(s) 283, 1746
FspBI CTAG 2 cut(s) 407, 479
GsaI CCCAGC 2 cut(s) 133, 1756
GsuI CTGGAG 1 cut(s) 752
HgaI GACGC 2 cut(s) 234, 579
Hin1I GRCGYC 2 cut(s) 245, 571
Hin1II CATG 9 cut(s) 106, 806, 1153, 1265, 1372, 1399, 1467, 1678, 1969
HindIII AAGCTT 1 cut(s) 1154
Hpy166II GTNNAC 1 cut(s) 1854
Hpy188III TCNNGA 7 cut(s) 479, 859, 986, 1174, 1389, 1918, 1927
Hpy8I GTNNAC 1 cut(s) 1854
Hpy99I CGWCG 4 cut(s) 230, 250, 422, 1526
HpyCH4IV ACGT 6 cut(s) 225, 331, 417, 492, 586, 1383
HpySE526I ACGT 6 cut(s) 225, 331, 417, 492, 586, 1383
Hsp92I GRCGYC 2 cut(s) 245, 571
Hsp92II CATG 9 cut(s) 106, 806, 1153, 1265, 1372, 1399, 1467, 1678, 1969
Kpn2I TCCGGA 2 cut(s) 985, 1388
KpnI GGTACC 1 cut(s) 775
KroI GCCGGC 1 cut(s) 645
KroNI GCCGGC 1 cut(s) 647
Ksp22I TGATCA 1 cut(s) 1479
KspI CCGCGG 1 cut(s) 325
LguI GCTCTTC 2 cut(s) 12, 1452
LmnI GCTCC 5 cut(s) 270, 387, 1345, 1538, 1639
Lsp1109I GCAGC 5 cut(s) 274, 734, 1068, 1090, 1960
LweI GCATC 2 cut(s) 997, 1798
MabI ACCWGGT 1 cut(s) 1338
MaeI CTAG 2 cut(s) 407, 479
MaeII ACGT 6 cut(s) 225, 331, 417, 492, 586, 1383
MaeIII GTNAC 4 cut(s) 187, 779, 1379, 1861
MboII GAAGA 9 cut(s) 208, 211, 748, 751, 909, 973, 1199, 1333, 1469
MflI RGATCY 1 cut(s) 817
MhlI GDGCHC 3 cut(s) 283, 1252, 1746
MlsI TGGCCA 1 cut(s) 1148
MluCI AATT 5 cut(s) 602, 977, 1363, 1448, 1947
MluNI TGGCCA 1 cut(s) 1148
MlyI GAGTC 4 cut(s) 862, 1035, 1399, 1838
MmeI TCCRAC 1 cut(s) 1425
Mox20I TGGCCA 1 cut(s) 1148
MroI TCCGGA 2 cut(s) 985, 1388
MroNI GCCGGC 1 cut(s) 645
MroXI GAANNNNTTC 1 cut(s) 965
MscI TGGCCA 1 cut(s) 1148
MseI TTAA 1 cut(s) 1197
MslI CAYNNNNRTG 1 cut(s) 1373
Msp20I TGGCCA 1 cut(s) 1148
MspA1I CMGCKG 3 cut(s) 324, 1081, 1244
Mva1269I GAATGC 1 cut(s) 1915
MvaI CCWGG 7 cut(s) 125, 145, 277, 488, 887, 1340, 1878
MvnI CGCG 1 cut(s) 324
NaeI GCCGGC 1 cut(s) 647
NciI CCSGG 3 cut(s) 47, 785, 1225
NcoI CCATGG 1 cut(s) 1463
NgoMIV GCCGGC 1 cut(s) 645
NlaIII CATG 9 cut(s) 106, 806, 1153, 1265, 1372, 1399, 1467, 1678, 1969
NlaIV GGNNCC 7 cut(s) 281, 337, 383, 773, 1059, 1102, 1815
NmeAIII GCCGAG 2 cut(s) 457, 581
NmuCI GTSAC 4 cut(s) 187, 779, 1379, 1861
PceI AGGCCT 2 cut(s) 148, 885
PciSI GCTCTTC 2 cut(s) 12, 1452
PctI GAATGC 1 cut(s) 1915
PdiI GCCGGC 1 cut(s) 647
PdmI GAANNNNTTC 1 cut(s) 965
PfeI GAWTC 8 cut(s) 360, 463, 795, 914, 1120, 1513, 1603, 1834
Pfl23II CGTACG 1 cut(s) 328
PflMI CCANNNNNTGG 1 cut(s) 1110
PinAI ACCGGT 1 cut(s) 1858
PleI GAGTC 4 cut(s) 861, 1034, 1399, 1838
PpsI GAGTC 4 cut(s) 861, 1034, 1399, 1838
Ppu21I YACGTR 1 cut(s) 332
PpuMI RGGWCCY 2 cut(s) 451, 1336
Psp5II RGGWCCY 2 cut(s) 451, 1336
Psp6I CCWGG 7 cut(s) 123, 143, 275, 486, 885, 1338, 1876
PspFI CCCAGC 2 cut(s) 129, 1752
PspGI CCWGG 7 cut(s) 123, 143, 275, 486, 885, 1338, 1876
PspLI CGTACG 1 cut(s) 328
PspN4I GGNNCC 7 cut(s) 281, 337, 383, 773, 1059, 1102, 1815
PspOMI GGGCCC 1 cut(s) 279
PspPI GGNCC 8 cut(s) 17, 52, 67, 127, 279, 280, 451, 1336
PspPPI RGGWCCY 2 cut(s) 451, 1336
PsuI RGATCY 1 cut(s) 817
PvuII CAGCTG 1 cut(s) 1081
RsaI GTAC 3 cut(s) 330, 470, 773
RsaNI GTAC 3 cut(s) 329, 469, 772
RseI CAYNNNNRTG 1 cut(s) 1373
SacII CCGCGG 1 cut(s) 325
SapI GCTCTTC 2 cut(s) 12, 1452
SaqAI TTAA 1 cut(s) 1197
Sau96I GGNCC 8 cut(s) 17, 52, 67, 127, 279, 280, 451, 1336
SchI GAGTC 4 cut(s) 862, 1035, 1399, 1838
SduI GDGCHC 3 cut(s) 283, 1252, 1746
SexAI ACCWGGT 1 cut(s) 1338
SfaNI GCATC 2 cut(s) 997, 1798
SfiI GGCCNNNNNGGCC 1 cut(s) 1145
Sfr303I CCGCGG 1 cut(s) 325
SgrAI CRCCGGYG 2 cut(s) 194, 1858
SgrBI CCGCGG 1 cut(s) 325
SinI GGWCC 3 cut(s) 17, 451, 1336
SmiMI CAYNNNNRTG 1 cut(s) 1373
SmlI CTYRAG 3 cut(s) 302, 857, 1916
SmoI CTYRAG 3 cut(s) 302, 857, 1916
Sse9I AATT 5 cut(s) 602, 977, 1363, 1448, 1947
SseBI AGGCCT 2 cut(s) 148, 885
SspMI CTAG 2 cut(s) 407, 479
StuI AGGCCT 2 cut(s) 148, 885
StyI CCWWGG 1 cut(s) 1463
TaiI ACGT 6 cut(s) 228, 334, 420, 495, 589, 1386
TaqI TCGA 3 cut(s) 96, 210, 928
TaqII GACCGA 2 cut(s) 5, 1775
TasI AATT 5 cut(s) 602, 977, 1363, 1448, 1947
TauI GCSGC 6 cut(s) 53, 327, 374, 686, 893, 1244
TfiI GAWTC 8 cut(s) 360, 463, 795, 914, 1120, 1513, 1603, 1834
Tru1I TTAA 1 cut(s) 1197
Tru9I TTAA 1 cut(s) 1197
TscAI CASTG 4 cut(s) 527, 1149, 1322, 1582
TseFI GTSAC 4 cut(s) 187, 779, 1379, 1861
TseI GCWGC 5 cut(s) 262, 722, 1078, 1081, 1973
Tsp45I GTSAC 4 cut(s) 187, 779, 1379, 1861
TspDTI ATGAA 5 cut(s) 82, 1008, 1166, 1200, 1586
TspGWI ACGGA 1 cut(s) 547
TspRI CASTG 4 cut(s) 527, 1149, 1322, 1582
Van91I CCANNNNNTGG 1 cut(s) 1110
VpaK11BI GGWCC 3 cut(s) 17, 451, 1336
XapI RAATTY 1 cut(s) 1947
XbaI TCTAGA 1 cut(s) 478
XcmI CCANNNNNNNNNTGG 1 cut(s) 151
XmiI GTMKAC 1 cut(s) 1853
XmnI GAANNNNTTC 1 cut(s) 965
XspI CTAG 2 cut(s) 407, 479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.