Prupe.5G173300_v2.0.a1

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000255
Physical Location & Seq
Reverse (-)
14758089 .. 14760031
1943 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G173300.1

Sequence Viewer

Length: 1713 bp
ATGTCGAAGCCAGAGGCAGAGACACACCCTGATCAGCTTGTCAACAACAACAACAACCCATGCCTTGATCTCTTTTACAACGTCGGGGAAGAAGACGTTCACGACCCGGCCCAGATGGAGGCCTCGTGTAATTATGTGAAGCAAGTGCTACCTCTGGCCTGGTCCCACAATCCCATAACCGCCCTCAAGCTCGTCTGCAACCTACTGGATGGAAAGTTCAATCTCTCTGCCTTCTACACGGCTGCGTTTTGGCTCCACCACAACCACCCCAAGACACTATTGTGCAACCTGGCGTCTATTGTCCGGTCCTTCGAGGCTTTTTCCAACTCAATGAACATTGTGTACCACATCCTTCGAGAAGGCCAAGACATTTACAAGACTACTCGCCGTCGGGGCTACAACCGTTATCAATTGTTGCACAAGGCTGTTAAGCGGTACAAGCATGACCGCGATTATCAATTGTTGCACGACCAGGTTTCGGATATTTTGGCCGAGATGTTCAAGTCTGATATGGAGAAATTGAAATTCAAGGAGGCGGCGGAGGAGCAGAACAAAAACAACAAATTGAAGCAATTATCTGAATCTGATAATGACGACAGAATAACCATGGCCGCATGCGATATACATTCTGCCGTGTCAACATTCGCGGATTACAACCCCGACTACAGCATCACTTTGCTGCTTGAAAACATTGCCAGGAAGTTTTTCCCGCCAGAAGAATATCACAAATTAGAATTAGGTGGAGGTCATGGTAAAGGAAAACGGGCCAAGGCCAAAGATGCCGACAGAGTCATGGTCAAGCGGCTCAAGGATGAGGTTTTGCCCTCCTTGAAGAAGGCCTACTTTGCCCAGGATTATCCGCCAGACGAGGCCAGTGCTGTTGAGACCTATTTGGAGAAGGTGAAAGCCAGCTGCTGCTGCAGTGGCAGTGCTGGCAAGATTTCGTCCTCCTCGTCCTTGTTGGCGGATGCTCTGCTTCCGCATGAGATCACAGGCTACGTGCACCATTGGAATTTAGGCCGCGCTGCTGAGCTCCAGTGGAAGTCAATGGTGGAGGACGTCTACTCAAAGCAGGGCAAGTTCAAAAACTGGTTGGCTGTATGTGATGTCCACCTCAAATTCATGGACGACGAGGTCTCCTTGGAGGTCTCCATTGCTTTGGGACTCTTGCTGTCTGAACTGAGTGAAGAGCCATGGAAAGGAAAGGTGATCCAATTCAGTGATGAGCCTCAGCTACATTCCATACAAGGCGGCGACGATCTTAGGTACAAGTACGAGTTTGTGAGGAGGATGAACTGCAGTGTCGACCTTGATTTTGAGAAGCTGTTTGATTTGATTCTCCAAGTGGCTGTGAATGAGAACTTGAAGCCGGATCAGATGATCAAGAAGGTGTTGGTGTTGAGTCACCGGGACTTTGACAGTGCCAATGCGGCCGAAACTTCTTGGGAGATTGATTACCAGGCAATACAGAGCAAGTATAAGGAGAAAGGGTACGGGGATGTTGTGCCACACGTGGTGTTTTGGACTTTGTCAGAGTACAACCCGGAGAAGCCGGTGGCGCCTCGTACACAACCGGGGTTGTCCATTCTCAATGGCTTCTCTAACAATCTGCTCAAGCTCTTCCTCGACAATGAAGGCGAAATTGGCCCCGACCATCTCATGGAATTAGCCATATCCGATGAACGTTATCAAGCTTTCACTATAGTGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

571

Amino Acids

65.09

Weight (kDa)

5.64

Isoelectric Point (pI)

34.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1133
AatII GACGTC 1 cut(s) 1062
AccB1I GGYRCC 1 cut(s) 1558
AccB7I CCANNNNNTGG 1 cut(s) 1660
AccI GTMKAC 2 cut(s) 1062, 1305
AccII CGCG 3 cut(s) 450, 647, 1023
AclI AACGTT 1 cut(s) 1684
AclWI GGATC 2 cut(s) 1204, 1380
AcoI YGGCCR 3 cut(s) 489, 609, 1431
AcsI RAATTY 3 cut(s) 524, 1012, 1118
AcvI CACGTG 1 cut(s) 1513
AcyI GRCGYC 3 cut(s) 293, 1059, 1559
AdeI CACNNNGTG 1 cut(s) 1516
AfaI GTAC 7 cut(s) 344, 437, 1268, 1274, 1493, 1538, 1567
AfiI CCNNNNNNNGG 4 cut(s) 118, 478, 1199, 1660
AflIII ACRYGT 1 cut(s) 1510
AgsI TTSAA 9 cut(s) 220, 502, 523, 529, 568, 686, 832, 1084, 1366
AjnI CCWGG 6 cut(s) 158, 288, 471, 695, 849, 1458
AjuI GAANNNNNNNTTGG 2 cut(s) 1626, 1658
AleI CACNNNNGTG 2 cut(s) 280, 1703
AloI GAACNNNNNNTCC 2 cut(s) 200, 232
AluBI AGCT 8 cut(s) 37, 190, 912, 1033, 1234, 1324, 1618, 1694
AluI AGCT 8 cut(s) 37, 190, 912, 1033, 1234, 1324, 1618, 1694
Alw21I GWGCWC 2 cut(s) 1005, 1035
Alw26I GTCTC 4 cut(s) 14, 878, 1141, 1153
Alw44I GTGCAC 1 cut(s) 1001
AlwI GGATC 2 cut(s) 1204, 1380
AlwNI CAGNNNCTG 1 cut(s) 915
ApaLI GTGCAC 1 cut(s) 1001
ApeKI GCWGC 6 cut(s) 242, 679, 912, 915, 918, 1025
ApoI RAATTY 3 cut(s) 524, 1012, 1118
ArsI GACNNNNNNTTYG 2 cut(s) 1298, 1330
Asp700I GAANNNNTTC 2 cut(s) 96, 704
AspLEI GCGC 2 cut(s) 1025, 1561
AspS9I GGNCC 5 cut(s) 109, 162, 306, 765, 1646
AsuC2I CCSGG 4 cut(s) 107, 1409, 1544, 1575
AsuHPI GGTGA 3 cut(s) 913, 1219, 1397
AvaII GGWCC 2 cut(s) 162, 306
BaeGI GKGCMC 1 cut(s) 1005
BanI GGYRCC 1 cut(s) 1558
BanII GRGCYC 1 cut(s) 1035
BarI GAAGNNNNNNTAC 2 cut(s) 824, 856
BauI CACGAG 1 cut(s) 124
BbrPI CACGTG 1 cut(s) 1513
BbsI GAAGAC 1 cut(s) 99
Bbv12I GWGCWC 2 cut(s) 1005, 1035
BbvCI CCTCAGC 1 cut(s) 1230
BbvI GCAGC 6 cut(s) 229, 666, 899, 902, 905, 1012
BccI CCATC 3 cut(s) 109, 203, 1662
BceAI ACGGC 3 cut(s) 255, 372, 617
BcgI CGANNNNNNTGC 2 cut(s) 857, 891
BciT130I CCWGG 6 cut(s) 160, 290, 473, 697, 851, 1460
BclI TGATCA 2 cut(s) 31, 1380
BcnI CCSGG 4 cut(s) 107, 1409, 1544, 1575
BcoDI GTCTC 4 cut(s) 14, 878, 1141, 1153
BfmI CTRYAG 4 cut(s) 664, 919, 1297, 1701
BfoI RGCGCY 1 cut(s) 1562
BglI GCCNNNNNGGC 2 cut(s) 393, 1430
BlpI GCTNAGC 1 cut(s) 1029
Bme18I GGWCC 2 cut(s) 162, 306
BmgT120I GGNCC 5 cut(s) 109, 162, 306, 765, 1646
BmiI GGNNCC 4 cut(s) 164, 254, 1560, 1648
BmsI GCATC 3 cut(s) 678, 769, 958
BpiI GAAGAC 1 cut(s) 99
BpmI CTGGAG 1 cut(s) 1019
Bpu10I CCTNAGC 1 cut(s) 1230
Bpu1102I GCTNAGC 1 cut(s) 1029
BpuEI CTTGAG 3 cut(s) 170, 791, 1598
BpuMI CCSGG 4 cut(s) 107, 1409, 1544, 1575
BsaAI YACGTR 2 cut(s) 1000, 1513
BsaHI GRCGYC 3 cut(s) 293, 1059, 1559
BsaI GGTCTC 3 cut(s) 878, 1141, 1153
BsaJI CCNNGG 6 cut(s) 606, 768, 849, 1140, 1193, 1574
BsaWI WCCGGW 1 cut(s) 303
BsaXI ACNNNNNCTCC 6 cut(s) 110, 140, 1121, 1151, 1475, 1505
Bsc4I CCNNNNNNNGG 4 cut(s) 118, 478, 1199, 1660
Bse118I RCCGGY 1 cut(s) 1552
Bse1I ACTGG 4 cut(s) 210, 873, 1036, 1094
Bse3DI GCAATG 2 cut(s) 690, 1152
BseBI CCWGG 6 cut(s) 160, 290, 473, 697, 851, 1460
BseDI CCNNGG 6 cut(s) 606, 768, 849, 1140, 1193, 1574
BseGI GGATG 6 cut(s) 214, 348, 817, 973, 1296, 1504
BseLI CCNNNNNNNGG 4 cut(s) 118, 478, 1199, 1660
BseMI GCAATG 2 cut(s) 690, 1152
BseMII CTCAG 3 cut(s) 1020, 1172, 1244
BseNI ACTGG 4 cut(s) 210, 873, 1036, 1094
BseRI GAGGAG 3 cut(s) 557, 940, 1300
BseSI GKGCMC 1 cut(s) 1005
BseX3I CGGCCG 1 cut(s) 1431
BseXI GCAGC 6 cut(s) 229, 666, 899, 902, 905, 1012
Bsh1236I CGCG 3 cut(s) 450, 647, 1023
Bsh1285I CGRYCG 1 cut(s) 1434
BshNI GGYRCC 1 cut(s) 1558
BsiEI CGRYCG 1 cut(s) 1434
BsiHKAI GWGCWC 2 cut(s) 1005, 1035
BsiSI CCGG 7 cut(s) 107, 304, 1370, 1408, 1544, 1553, 1574
BslFI GGGAC 3 cut(s) 148, 1176, 1424
BslI CCNNNNNNNGG 4 cut(s) 118, 478, 1199, 1660
BsmAI GTCTC 4 cut(s) 14, 878, 1141, 1153
BsmFI GGGAC 3 cut(s) 148, 1176, 1424
Bso31I GGTCTC 3 cut(s) 878, 1141, 1153
Bsp1286I GDGCHC 2 cut(s) 1005, 1035
Bsp143I GATC 7 cut(s) 31, 67, 987, 1209, 1258, 1372, 1380
Bsp1720I GCTNAGC 1 cut(s) 1029
Bsp19I CCATGG 2 cut(s) 606, 1193
BspCNI CTCAG 3 cut(s) 1021, 1173, 1243
BspFNI CGCG 3 cut(s) 450, 647, 1023
BspLI GGNNCC 4 cut(s) 164, 254, 1560, 1648
BspMAI CTGCAG 2 cut(s) 923, 1301
BspPI GGATC 2 cut(s) 1204, 1380
BspQI GCTCTTC 2 cut(s) 1182, 1625
BspT107I GGYRCC 1 cut(s) 1558
BspTNI GGTCTC 3 cut(s) 878, 1141, 1153
BsrDI GCAATG 2 cut(s) 690, 1152
BsrFI RCCGGY 1 cut(s) 1552
BsrI ACTGG 4 cut(s) 210, 873, 1036, 1094
BssAI RCCGGY 1 cut(s) 1552
BssECI CCNNGG 6 cut(s) 606, 768, 849, 1140, 1193, 1574
BssMI GATC 7 cut(s) 31, 67, 987, 1209, 1258, 1372, 1380
BssNI GRCGYC 3 cut(s) 293, 1059, 1559
BssSI CACGAG 1 cut(s) 124
BssT1I CCWWGG 4 cut(s) 606, 768, 1140, 1193
Bst2BI CACGAG 1 cut(s) 124
Bst2UI CCWGG 6 cut(s) 160, 290, 473, 697, 851, 1460
Bst4CI ACNGT 2 cut(s) 404, 1421
Bst6I CTCTTC 2 cut(s) 1182, 1625
BstACI GRCGYC 3 cut(s) 293, 1059, 1559
BstBAI YACGTR 2 cut(s) 1000, 1513
BstC8I GCNNGC 3 cut(s) 616, 910, 934
BstDEI CTNAG 4 cut(s) 1029, 1181, 1230, 1262
BstDSI CCRYGG 2 cut(s) 606, 1193
BstF5I GGATG 6 cut(s) 214, 348, 817, 973, 1296, 1504
BstFNI CGCG 3 cut(s) 450, 647, 1023
BstH2I RGCGCY 1 cut(s) 1562
BstHHI GCGC 2 cut(s) 1025, 1561
BstKTI GATC 7 cut(s) 34, 70, 990, 1212, 1261, 1375, 1383
BstMAI GTCTC 4 cut(s) 14, 878, 1141, 1153
BstMBI GATC 7 cut(s) 31, 67, 987, 1209, 1258, 1372, 1380
BstMCI CGRYCG 1 cut(s) 1434
BstNI CCWGG 6 cut(s) 160, 290, 473, 697, 851, 1460
BstNSI RCATGY 1 cut(s) 618
BstSFI CTRYAG 4 cut(s) 664, 919, 1297, 1701
BstSLI GKGCMC 1 cut(s) 1005
BstUI CGCG 3 cut(s) 450, 647, 1023
BstV1I GCAGC 6 cut(s) 229, 666, 899, 902, 905, 1012
BstV2I GAAGAC 1 cut(s) 99
BstXI CCANNNNNNTGG 1 cut(s) 1159
BstZI CGGCCG 1 cut(s) 1431
BtgI CCRYGG 2 cut(s) 606, 1193
BtsCI GGATG 6 cut(s) 214, 348, 817, 973, 1296, 1504
BtsI GCAGTG 3 cut(s) 928, 934, 1306
BtsIMutI CAGTG 7 cut(s) 880, 928, 934, 1043, 1225, 1306, 1426
Cac8I GCNNGC 3 cut(s) 616, 910, 934
CaiI CAGNNNCTG 1 cut(s) 915
CfoI GCGC 2 cut(s) 1025, 1561
Cfr10I RCCGGY 1 cut(s) 1552
Cfr13I GGNCC 5 cut(s) 109, 162, 306, 765, 1646
CseI GACGC 1 cut(s) 282
CsiI ACCWGGT 1 cut(s) 471
Csp6I GTAC 7 cut(s) 343, 436, 1267, 1273, 1492, 1537, 1566
CviQI GTAC 7 cut(s) 343, 436, 1267, 1273, 1492, 1537, 1566
DdeI CTNAG 4 cut(s) 1029, 1181, 1230, 1262
DinI GGCGCC 1 cut(s) 1560
DpnI GATC 7 cut(s) 33, 69, 989, 1211, 1260, 1374, 1382
DpnII GATC 7 cut(s) 31, 67, 987, 1209, 1258, 1372, 1380
DraIII CACNNNGTG 1 cut(s) 1516
DrdI GACNNNNNNGTC 1 cut(s) 1133
DseDI GACNNNNNNGTC 1 cut(s) 1133
EaeI YGGCCR 3 cut(s) 489, 609, 1431
EagI CGGCCG 1 cut(s) 1431
Eam1104I CTCTTC 2 cut(s) 1182, 1625
EarI CTCTTC 2 cut(s) 1182, 1625
EciI GGCGGA 3 cut(s) 554, 849, 980
Ecl136II GAGCTC 1 cut(s) 1033
EclXI CGGCCG 1 cut(s) 1431
Eco130I CCWWGG 4 cut(s) 606, 768, 1140, 1193
Eco147I AGGCCT 2 cut(s) 122, 839
Eco24I GRGCYC 1 cut(s) 1035
Eco31I GGTCTC 3 cut(s) 878, 1141, 1153
Eco47I GGWCC 2 cut(s) 162, 306
Eco52I CGGCCG 1 cut(s) 1431
Eco53kI GAGCTC 1 cut(s) 1033
Eco72I CACGTG 1 cut(s) 1513
EcoICRI GAGCTC 1 cut(s) 1033
EcoRII CCWGG 6 cut(s) 158, 288, 471, 695, 849, 1458
EcoT14I CCWWGG 4 cut(s) 606, 768, 1140, 1193
EcoT38I GRGCYC 1 cut(s) 1035
EgeI GGCGCC 1 cut(s) 1560
EheI GGCGCC 1 cut(s) 1560
ErhI CCWWGG 4 cut(s) 606, 768, 1140, 1193
FalI AAGNNNNNCTT 2 cut(s) 827, 859
FaqI GGGAC 3 cut(s) 148, 1176, 1424
FauI CCCGC 1 cut(s) 717
FbaI TGATCA 2 cut(s) 31, 1380
FblI GTMKAC 2 cut(s) 1062, 1305
FokI GGATG 6 cut(s) 221, 335, 824, 980, 1303, 1511
FriOI GRGCYC 1 cut(s) 1035
GlaI GCGC 2 cut(s) 1024, 1560
GsuI CTGGAG 1 cut(s) 1019
HaeII RGCGCY 1 cut(s) 1562
HapII CCGG 7 cut(s) 107, 304, 1370, 1408, 1544, 1553, 1574
HgaI GACGC 1 cut(s) 282
HhaI GCGC 2 cut(s) 1025, 1561
Hin1I GRCGYC 3 cut(s) 293, 1059, 1559
Hin6I GCGC 2 cut(s) 1023, 1559
HinP1I GCGC 2 cut(s) 1023, 1559
HincII GTYRAC 3 cut(s) 43, 639, 1306
HindII GTYRAC 3 cut(s) 43, 639, 1306
HindIII AAGCTT 1 cut(s) 1692
HinfI GANTC 5 cut(s) 581, 789, 1164, 1336, 1402
HpaII CCGG 7 cut(s) 107, 304, 1370, 1408, 1544, 1553, 1574
HphI GGTGA 3 cut(s) 913, 1219, 1397
Hpy188I TCNGA 8 cut(s) 481, 508, 580, 586, 1177, 1377, 1534, 1678
Hpy188III TCNNGA 3 cut(s) 101, 356, 1384
Hpy99I CGWCG 4 cut(s) 86, 393, 1133, 1259
HpyAV CCTTC 8 cut(s) 241, 319, 353, 362, 829, 892, 1381, 1628
HpyCH4III ACNGT 2 cut(s) 404, 1421
HpyCH4IV ACGT 6 cut(s) 81, 96, 999, 1059, 1512, 1684
HpyCH4V TGCA 7 cut(s) 198, 285, 418, 466, 921, 1003, 1299
HpyF3I CTNAG 4 cut(s) 1029, 1181, 1230, 1262
HpySE526I ACGT 6 cut(s) 81, 96, 999, 1059, 1512, 1684
Hsp92I GRCGYC 3 cut(s) 293, 1059, 1559
HspAI GCGC 2 cut(s) 1023, 1559
KasI GGCGCC 1 cut(s) 1558
Ksp22I TGATCA 2 cut(s) 31, 1380
Kzo9I GATC 7 cut(s) 31, 67, 987, 1209, 1258, 1372, 1380
LguI GCTCTTC 2 cut(s) 1182, 1625
LmnI GCTCC 3 cut(s) 258, 544, 1038
Lsp1109I GCAGC 6 cut(s) 229, 666, 899, 902, 905, 1012
LweI GCATC 3 cut(s) 678, 769, 958
MabI ACCWGGT 1 cut(s) 471
MaeII ACGT 6 cut(s) 81, 96, 999, 1059, 1512, 1684
MaeIII GTNAC 1 cut(s) 1403
MalI GATC 7 cut(s) 33, 69, 989, 1211, 1260, 1374, 1382
MboI GATC 7 cut(s) 31, 67, 987, 1209, 1258, 1372, 1380
MboII GAAGA 6 cut(s) 101, 104, 728, 844, 1199, 1612
MfeI CAATTG 2 cut(s) 410, 458
MhlI GDGCHC 2 cut(s) 1005, 1035
Mly113I GGCGCC 1 cut(s) 1559
MlyI GAGTC 3 cut(s) 798, 1158, 1411
MmeI TCCRAC 1 cut(s) 348
MroXI GAANNNNTTC 2 cut(s) 96, 704
MseI TTAA 1 cut(s) 429
MslI CAYNNNNRTG 2 cut(s) 280, 1703
MspA1I CMGCKG 1 cut(s) 912
MspI CCGG 7 cut(s) 107, 304, 1370, 1408, 1544, 1553, 1574
MunI CAATTG 2 cut(s) 410, 458
MvaI CCWGG 6 cut(s) 160, 290, 473, 697, 851, 1460
MvnI CGCG 3 cut(s) 450, 647, 1023
NarI GGCGCC 1 cut(s) 1559
NciI CCSGG 4 cut(s) 107, 1409, 1544, 1575
NcoI CCATGG 2 cut(s) 606, 1193
NdeII GATC 7 cut(s) 31, 67, 987, 1209, 1258, 1372, 1380
NlaIV GGNNCC 4 cut(s) 164, 254, 1560, 1648
NmeAIII GCCGAG 1 cut(s) 517
NmuCI GTSAC 1 cut(s) 1403
NspI RCATGY 1 cut(s) 618
OliI CACNNNNGTG 2 cut(s) 280, 1703
PaeI GCATGC 1 cut(s) 618
PceI AGGCCT 2 cut(s) 122, 839
PciSI GCTCTTC 2 cut(s) 1182, 1625
PcsI WCGNNNNNNNCGW 1 cut(s) 950
PdmI GAANNNNTTC 2 cut(s) 96, 704
PfeI GAWTC 2 cut(s) 581, 1336
PflFI GACNNNGTC 3 cut(s) 788, 1133, 1528
PflMI CCANNNNNTGG 1 cut(s) 1660
PleI GAGTC 3 cut(s) 797, 1158, 1410
PluTI GGCGCC 1 cut(s) 1562
PmaCI CACGTG 1 cut(s) 1513
PmlI CACGTG 1 cut(s) 1513
PpsI GAGTC 3 cut(s) 797, 1158, 1410
Ppu21I YACGTR 2 cut(s) 1000, 1513
Psp124BI GAGCTC 1 cut(s) 1035
Psp1406I AACGTT 1 cut(s) 1684
Psp6I CCWGG 6 cut(s) 158, 288, 471, 695, 849, 1458
PspCI CACGTG 1 cut(s) 1513
PspGI CCWGG 6 cut(s) 158, 288, 471, 695, 849, 1458
PspN4I GGNNCC 4 cut(s) 164, 254, 1560, 1648
PspPI GGNCC 5 cut(s) 109, 162, 306, 765, 1646
PsrI GAACNNNNNNTAC 2 cut(s) 326, 358
PstI CTGCAG 2 cut(s) 923, 1301
PstNI CAGNNNCTG 1 cut(s) 915
PsyI GACNNNGTC 3 cut(s) 788, 1133, 1528
PvuII CAGCTG 1 cut(s) 912
RsaI GTAC 7 cut(s) 344, 437, 1268, 1274, 1493, 1538, 1567
RsaNI GTAC 7 cut(s) 343, 436, 1267, 1273, 1492, 1537, 1566
RseI CAYNNNNRTG 2 cut(s) 280, 1703
SacI GAGCTC 1 cut(s) 1035
SalI GTCGAC 1 cut(s) 1304
SapI GCTCTTC 2 cut(s) 1182, 1625
SaqAI TTAA 1 cut(s) 429
Sau3AI GATC 7 cut(s) 31, 67, 987, 1209, 1258, 1372, 1380
Sau96I GGNCC 5 cut(s) 109, 162, 306, 765, 1646
SchI GAGTC 3 cut(s) 798, 1158, 1411
SduI GDGCHC 2 cut(s) 1005, 1035
SexAI ACCWGGT 1 cut(s) 471
SfaNI GCATC 3 cut(s) 678, 769, 958
SfcI CTRYAG 4 cut(s) 664, 919, 1297, 1701
SfoI GGCGCC 1 cut(s) 1560
SinI GGWCC 2 cut(s) 162, 306
SmiMI CAYNNNNRTG 2 cut(s) 280, 1703
SmlI CTYRAG 3 cut(s) 185, 806, 1613
SmoI CTYRAG 3 cut(s) 185, 806, 1613
SphI GCATGC 1 cut(s) 618
SseBI AGGCCT 2 cut(s) 122, 839
SspDI GGCGCC 1 cut(s) 1558
SstI GAGCTC 1 cut(s) 1035
StuI AGGCCT 2 cut(s) 122, 839
StyI CCWWGG 4 cut(s) 606, 768, 1140, 1193
TaaI ACNGT 2 cut(s) 404, 1421
TaiI ACGT 6 cut(s) 84, 99, 1002, 1062, 1515, 1687
TaqI TCGA 5 cut(s) 5, 312, 355, 1305, 1626
TatI WGTACW 1 cut(s) 1536
TauI GCSGC 6 cut(s) 539, 614, 805, 1023, 1254, 1433
TfiI GAWTC 2 cut(s) 581, 1336
Tru1I TTAA 1 cut(s) 429
Tru9I TTAA 1 cut(s) 429
TscAI CASTG 7 cut(s) 880, 928, 934, 1043, 1225, 1306, 1426
TseFI GTSAC 1 cut(s) 1403
TseI GCWGC 6 cut(s) 242, 679, 912, 915, 918, 1025
Tsp45I GTSAC 1 cut(s) 1403
TspDTI ATGAA 5 cut(s) 347, 1111, 1307, 1647, 1695
TspRI CASTG 7 cut(s) 880, 928, 934, 1043, 1225, 1306, 1426
Tth111I GACNNNGTC 3 cut(s) 788, 1133, 1528
Van91I CCANNNNNTGG 1 cut(s) 1660
VneI GTGCAC 1 cut(s) 1001
VpaK11BI GGWCC 2 cut(s) 162, 306
XapI RAATTY 3 cut(s) 524, 1012, 1118
XceI RCATGY 1 cut(s) 618
XmiI GTMKAC 2 cut(s) 1062, 1305
XmnI GAANNNNTTC 2 cut(s) 96, 704
ZraI GACGTC 1 cut(s) 1060
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.