Prupe.5G219200_v2.0.a1

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000255
Physical Location & Seq
Reverse (-)
17119196 .. 17120976
1781 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G219200.1

Sequence Viewer

Length: 1680 bp
ATGACTGAGAACAATTCACCCACCTACCTCTCCTCCCGGAACCCCTGCCTTGATTTCTTCTTCCACGTCGTCCCAGACACTCCGCCTTCCTACCTCGACCAACAGCTTCCCCTGGCTTGGGCCCACGATTCCCTGACCACCCTCAAGCTCATCTGCAACCTCCGTGGGGTGCGTGGTTTTGGAAAGTCCGACAAGGAAGGCTTTTACACGGCGGCGTTTTGGCTCCACCGGAACCACCCCAAAACCCTAGCCTGCAACCTCGCCTCCTTTGCCCAATTCGGGTGCTTTAGAGACCTGCCCGAGATTCTGTACCGGGTTCTACAAGGCCAGGACGTGAGGGAGAAGGAAAAGGCCGAGTGGCAACGGATAAAAGGCAGTGGGAAGAGGGGGAGGATTATGAGGACAGATGGAACCAGGAGGGACAAGTCGAAATCTAAAGCGAAAAGGGTTAAGGAGGAGTCTAGAGAGGTTCGGATCAACAAGTCATTGGAGAGGGACAAATTGGAAAAGGAAAAGATTTCGGATCTCTTTGCGGAGTGCTTGAAGTCGGATATGGAATGTTTGAAGAGGAATAACTACATTACGCTGGCGGCCAAGTGGTGTCCTTCCATCTACTCCTCCTTCGACCGTGCCACTTTGCTCTGCGAAAGCATTGCAAGGAAGGTTTTTCCGCGGGAATTGTGCCCAGAGTATGAAGGCATTGAGGATGAACATTACGCCTACAGAGTTCGGGACAGGTTGAAGAAGGAGGTTTTGGTGCCGTTGAGGAAAGCCATGGAGTTACCCGAGGTGTATATGACTACCAAGCAGTGGGGTTCCATTCCGTACAACAAAGTGGCCTCTGTGGCCATGAAGCTTTACAAGGAAAAGTTTTTGGAGCACGACAAAGAGAGGTTTAGCAAGTATTCGGAGGATGTCAAAGCCGGCAAGTCCAAGATTGCCGCCGGTGCTTTGCTTCCGCATGAGATCATTGCCCAACTGAATATTGGGTTCTACGATCATTATTCTTTTAAATCTGAACCCAACGAAAATGGTGATGTTGATGTTCAAGTGGCTGAGCTTCAGTGGAAGAGAATGGTGGATGACATGCTAAAGCAAGGCAATATGAACAACTGCTTGGCTGTATGTGATGTCTCGGCAAGCATGGGAGGAACCCCAATGGAGGTGTCCGTGGCTTTGGGATTGTTGGTGTCCGAACTGAGTGAAGAGCCATGGGAGGGAAAGGTTATCACTTTCAGTCAAAACCCTCAGCTGCATTTGATAAAAGGGGATGATCTTAGTTCCAAGTGCAAGTTTGTGAGGAGGATGGAGTGGGGCATGAACACTGATTTTCCAACCGTGAATGGGAATTTGAAGCCAGAGCATATGATCAAGAGGACATTCGTGTTCAGCGACATGGAATTTGATCAGGCTTCGAGCAATAGTTGGGAGACTGATTATGAGAGGAAGTTTAAGGAGAAAGGGTACGAGAATGCAGTGCCACAGATTGTGTTTTGGAATCTGAGGCACTCGAGTTCTACACCAGTGTCTAAGACACAACCAGGGGTGGCACTGTTGAGTGGCTTCTCCAAGAATTTGATGAAGATGTTCTTCAAACATGATGGGGAAATTTGCCCAGAACTTTTCATGGAAATAGCCATCTCTGGCGAAGAGTGTCAGAGTCTGACTGTAGTAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

560

Amino Acids

64.26

Weight (kDa)

8.06

Isoelectric Point (pI)

39.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 303
AccB1I GGYRCC 1 cut(s) 757
AccB7I CCANNNNNTGG 1 cut(s) 810
AccII CGCG 1 cut(s) 673
AciI CCGC 8 cut(s) 83, 212, 533, 590, 671, 673, 942, 959
AclWI GGATC 2 cut(s) 482, 531
AcoI YGGCCR 2 cut(s) 591, 846
AcsI RAATTY 4 cut(s) 1348, 1400, 1573, 1608
AcuI CTGAAG 1 cut(s) 1046
AfaI GTAC 3 cut(s) 311, 827, 1466
AfiI CCNNNNNNNGG 8 cut(s) 117, 118, 166, 279, 810, 1162, 1217, 1344
AgsI TTSAA 6 cut(s) 544, 565, 742, 1049, 1354, 1594
AjiI CACGTC 2 cut(s) 67, 334
AjnI CCWGG 4 cut(s) 111, 327, 413, 1540
AjuI GAANNNNNNNTTGG 4 cut(s) 737, 769, 1100, 1132
AluBI AGCT 5 cut(s) 106, 148, 856, 1060, 1252
AluI AGCT 5 cut(s) 106, 148, 856, 1060, 1252
Alw21I GWGCWC 1 cut(s) 882
Alw26I GTCTC 3 cut(s) 285, 1138, 1424
AlwI GGATC 2 cut(s) 482, 531
AlwNI CAGNNNCTG 1 cut(s) 1663
Ama87I CYCGRG 3 cut(s) 299, 785, 1510
AoxI GGCC 6 cut(s) 120, 325, 351, 591, 837, 846
ApaI GGGCCC 1 cut(s) 124
ApeKI GCWGC 1 cut(s) 1252
ApoI RAATTY 4 cut(s) 1348, 1400, 1573, 1608
ArsI GACNNNNNNTTYG 2 cut(s) 1385, 1417
Asp700I GAANNNNTTC 1 cut(s) 1586
AspS9I GGNCC 2 cut(s) 120, 121
AsuC2I CCSGG 2 cut(s) 37, 314
AsuHPI GGTGA 2 cut(s) 9, 1046
AvaI CYCGRG 3 cut(s) 299, 785, 1510
BaeGI GKGCMC 2 cut(s) 124, 686
BalI TGGCCA 1 cut(s) 848
BanI GGYRCC 1 cut(s) 757
BanII GRGCYC 1 cut(s) 124
Bbv12I GWGCWC 1 cut(s) 882
BbvCI CCTCAGC 1 cut(s) 1248
BbvI GCAGC 1 cut(s) 1239
BccI CCATC 5 cut(s) 401, 617, 1300, 1595, 1646
BceAI ACGGC 2 cut(s) 225, 745
BcgI CGANNNNNNTGC 2 cut(s) 635, 669
BciT130I CCWGG 4 cut(s) 113, 329, 415, 1542
BclI TGATCA 2 cut(s) 1368, 1405
BcnI CCSGG 2 cut(s) 37, 314
BcoDI GTCTC 3 cut(s) 285, 1138, 1424
BfaI CTAG 2 cut(s) 248, 462
BfmI CTRYAG 2 cut(s) 721, 1668
BfuAI ACCTGC 1 cut(s) 303
BglI GCCNNNNNGGC 1 cut(s) 845
BisI GCNGC 4 cut(s) 213, 591, 942, 1253
BlpI GCTNAGC 1 cut(s) 1056
BlsI GCNGC 4 cut(s) 214, 592, 943, 1254
Bme1390I CCNGG 6 cut(s) 37, 113, 314, 329, 415, 1542
BmeT110I CYCGRG 3 cut(s) 299, 785, 1510
BmgBI CACGTC 2 cut(s) 67, 334
BmgT120I GGNCC 2 cut(s) 120, 121
BmiI GGNNCC 8 cut(s) 41, 122, 224, 233, 412, 759, 817, 1153
BmrFI CCNGG 6 cut(s) 37, 113, 314, 329, 415, 1542
Bpu10I CCTNAGC 1 cut(s) 1248
Bpu1102I GCTNAGC 1 cut(s) 1056
BpuEI CTTGAG 1 cut(s) 128
BpuMI CCSGG 2 cut(s) 37, 314
BsaI GGTCTC 1 cut(s) 285
BsaJI CCNNGG 8 cut(s) 111, 163, 671, 774, 786, 1170, 1211, 1541
BsaWI WCCGGW 1 cut(s) 228
BsaXI ACNNNNNCTCC 6 cut(s) 17, 47, 248, 278, 1448, 1478
Bsc4I CCNNNNNNNGG 8 cut(s) 117, 118, 166, 279, 810, 1162, 1217, 1344
Bse118I RCCGGY 2 cut(s) 923, 944
Bse1I ACTGG 1 cut(s) 1523
Bse3DI GCAATG 2 cut(s) 651, 969
BseBI CCWGG 4 cut(s) 113, 329, 415, 1542
BseDI CCNNGG 8 cut(s) 111, 163, 671, 774, 786, 1170, 1211, 1541
BseGI GGATG 5 cut(s) 712, 919, 1087, 1276, 1311
BseLI CCNNNNNNNGG 8 cut(s) 117, 118, 166, 279, 810, 1162, 1217, 1344
BseMI GCAATG 2 cut(s) 651, 969
BseMII CTCAG 4 cut(s) 1047, 1190, 1262, 1493
BseNI ACTGG 1 cut(s) 1523
BseRI GAGGAG 4 cut(s) 22, 470, 607, 1315
BseSI GKGCMC 2 cut(s) 124, 686
BseXI GCAGC 1 cut(s) 1239
Bsh1236I CGCG 1 cut(s) 673
Bsh1285I CGRYCG 1 cut(s) 628
BshFI GGCC 6 cut(s) 122, 327, 353, 593, 839, 848
BshNI GGYRCC 1 cut(s) 757
BsiEI CGRYCG 1 cut(s) 628
BsiHKAI GWGCWC 1 cut(s) 882
BsiHKCI CYCGRG 3 cut(s) 299, 785, 1510
BsiSI CCGG 5 cut(s) 37, 229, 313, 924, 945
BslFI GGGAC 4 cut(s) 56, 434, 509, 746
BslI CCNNNNNNNGG 8 cut(s) 117, 118, 166, 279, 810, 1162, 1217, 1344
BsmAI GTCTC 3 cut(s) 285, 1138, 1424
BsmFI GGGAC 4 cut(s) 56, 434, 509, 746
BsmI GAATGC 1 cut(s) 1477
BsnI GGCC 6 cut(s) 122, 327, 353, 593, 839, 848
Bso31I GGTCTC 1 cut(s) 285
BsoBI CYCGRG 3 cut(s) 299, 785, 1510
Bsp120I GGGCCC 1 cut(s) 120
Bsp1286I GDGCHC 3 cut(s) 124, 686, 882
Bsp143I GATC 7 cut(s) 474, 523, 966, 997, 1273, 1368, 1405
Bsp1720I GCTNAGC 1 cut(s) 1056
Bsp19I CCATGG 2 cut(s) 774, 1211
BspACI CCGC 8 cut(s) 83, 212, 533, 590, 671, 673, 942, 959
BspANI GGCC 6 cut(s) 122, 327, 353, 593, 839, 848
BspCNI CTCAG 4 cut(s) 1048, 1191, 1261, 1494
BspFNI CGCG 1 cut(s) 673
BspLI GGNNCC 8 cut(s) 41, 122, 224, 233, 412, 759, 817, 1153
BspMI ACCTGC 1 cut(s) 303
BspPI GGATC 2 cut(s) 482, 531
BspQI GCTCTTC 1 cut(s) 1200
BspT107I GGYRCC 1 cut(s) 757
BspTNI GGTCTC 1 cut(s) 285
BsrDI GCAATG 2 cut(s) 651, 969
BsrFI RCCGGY 2 cut(s) 923, 944
BsrI ACTGG 1 cut(s) 1523
BssAI RCCGGY 2 cut(s) 923, 944
BssECI CCNNGG 8 cut(s) 111, 163, 671, 774, 786, 1170, 1211, 1541
BssMI GATC 7 cut(s) 474, 523, 966, 997, 1273, 1368, 1405
BssT1I CCWWGG 2 cut(s) 774, 1211
Bst2UI CCWGG 4 cut(s) 113, 329, 415, 1542
Bst4CI ACNGT 4 cut(s) 629, 1339, 1554, 1669
Bst6I CTCTTC 5 cut(s) 377, 560, 1064, 1200, 1644
BstC8I GCNNGC 4 cut(s) 253, 588, 925, 1141
BstDEI CTNAG 7 cut(s) 6, 1056, 1199, 1248, 1277, 1502, 1530
BstDSI CCRYGG 5 cut(s) 163, 671, 774, 1170, 1211
BstF5I GGATG 5 cut(s) 712, 919, 1087, 1276, 1311
BstFNI CGCG 1 cut(s) 673
BstKTI GATC 7 cut(s) 477, 526, 969, 1000, 1276, 1371, 1408
BstMAI GTCTC 3 cut(s) 285, 1138, 1424
BstMBI GATC 7 cut(s) 474, 523, 966, 997, 1273, 1368, 1405
BstMCI CGRYCG 1 cut(s) 628
BstMWI GCNNNNNNNGC 3 cut(s) 269, 845, 947
BstNI CCWGG 4 cut(s) 113, 329, 415, 1542
BstNSI RCATGY 1 cut(s) 1090
BstSCI CCNGG 6 cut(s) 35, 111, 312, 327, 413, 1540
BstSFI CTRYAG 2 cut(s) 721, 1668
BstSLI GKGCMC 2 cut(s) 124, 686
BstUI CGCG 1 cut(s) 673
BstV1I GCAGC 1 cut(s) 1239
BstX2I RGATCY 1 cut(s) 523
BstYI RGATCY 1 cut(s) 523
BsuRI GGCC 6 cut(s) 122, 327, 353, 593, 839, 848
BtgI CCRYGG 5 cut(s) 163, 671, 774, 1170, 1211
BtrI CACGTC 2 cut(s) 67, 334
BtsCI GGATG 5 cut(s) 712, 919, 1087, 1276, 1311
BtsI GCAGTG 3 cut(s) 382, 815, 1482
BtsIMutI CAGTG 7 cut(s) 382, 815, 1070, 1323, 1482, 1530, 1550
BveI ACCTGC 1 cut(s) 303
Cac8I GCNNGC 4 cut(s) 253, 588, 925, 1141
CaiI CAGNNNCTG 1 cut(s) 1663
Cfr10I RCCGGY 2 cut(s) 923, 944
Cfr13I GGNCC 2 cut(s) 120, 121
Cfr42I CCGCGG 1 cut(s) 674
Csp6I GTAC 3 cut(s) 310, 826, 1465
CspCI CAANNNNNGTGG 2 cut(s) 145, 180
CviQI GTAC 3 cut(s) 310, 826, 1465
DdeI CTNAG 7 cut(s) 6, 1056, 1199, 1248, 1277, 1502, 1530
DpnI GATC 7 cut(s) 476, 525, 968, 999, 1275, 1370, 1407
DpnII GATC 7 cut(s) 474, 523, 966, 997, 1273, 1368, 1405
DraI TTTAAA 1 cut(s) 1012
EaeI YGGCCR 2 cut(s) 591, 846
Eam1104I CTCTTC 5 cut(s) 377, 560, 1064, 1200, 1644
EarI CTCTTC 5 cut(s) 377, 560, 1064, 1200, 1644
EciI GGCGGA 1 cut(s) 72
Eco130I CCWWGG 2 cut(s) 774, 1211
Eco24I GRGCYC 1 cut(s) 124
Eco31I GGTCTC 1 cut(s) 285
Eco57I CTGAAG 1 cut(s) 1046
Eco88I CYCGRG 3 cut(s) 299, 785, 1510
EcoRII CCWGG 4 cut(s) 111, 327, 413, 1540
EcoT14I CCWWGG 2 cut(s) 774, 1211
EcoT38I GRGCYC 1 cut(s) 124
ErhI CCWWGG 2 cut(s) 774, 1211
FalI AAGNNNNNCTT 4 cut(s) 185, 217, 1574, 1606
FaqI GGGAC 4 cut(s) 56, 434, 509, 746
FauI CCCGC 1 cut(s) 666
FauNDI CATATG 1 cut(s) 1365
FbaI TGATCA 2 cut(s) 1368, 1405
Fnu4HI GCNGC 4 cut(s) 213, 591, 942, 1253
FokI GGATG 5 cut(s) 719, 926, 1094, 1283, 1318
FriOI GRGCYC 1 cut(s) 124
Fsp4HI GCNGC 4 cut(s) 213, 591, 942, 1253
FspBI CTAG 2 cut(s) 248, 462
GluI GCNGC 4 cut(s) 213, 591, 942, 1253
HaeIII GGCC 6 cut(s) 122, 327, 353, 593, 839, 848
HapII CCGG 5 cut(s) 37, 229, 313, 924, 945
HindIII AAGCTT 1 cut(s) 854
HinfI GANTC 5 cut(s) 128, 304, 458, 1498, 1660
HpaII CCGG 5 cut(s) 37, 229, 313, 924, 945
HphI GGTGA 2 cut(s) 9, 1046
Hpy188III TCNNGA 3 cut(s) 462, 731, 1372
Hpy99I CGWCG 1 cut(s) 71
HpyAV CCTTC 8 cut(s) 96, 191, 337, 615, 631, 655, 689, 739
HpyCH4III ACNGT 4 cut(s) 629, 1339, 1554, 1669
HpyCH4IV ACGT 2 cut(s) 66, 333
HpyCH4V TGCA 6 cut(s) 156, 255, 656, 1255, 1290, 1475
HpyF10VI GCNNNNNNNGC 3 cut(s) 269, 845, 947
HpyF3I CTNAG 7 cut(s) 6, 1056, 1199, 1248, 1277, 1502, 1530
HpySE526I ACGT 2 cut(s) 66, 333
KroI GCCGGC 1 cut(s) 923
KroNI GCCGGC 1 cut(s) 925
Ksp22I TGATCA 2 cut(s) 1368, 1405
KspI CCGCGG 1 cut(s) 674
Kzo9I GATC 7 cut(s) 474, 523, 966, 997, 1273, 1368, 1405
LguI GCTCTTC 1 cut(s) 1200
LmnI GCTCC 2 cut(s) 228, 877
Lsp1109I GCAGC 1 cut(s) 1239
MaeI CTAG 2 cut(s) 248, 462
MaeII ACGT 2 cut(s) 66, 333
MaeIII GTNAC 1 cut(s) 780
MalI GATC 7 cut(s) 476, 525, 968, 999, 1275, 1370, 1407
MboI GATC 7 cut(s) 474, 523, 966, 997, 1273, 1368, 1405
MflI RGATCY 1 cut(s) 523
MhlI GDGCHC 3 cut(s) 124, 686, 882
MlsI TGGCCA 1 cut(s) 848
MluCI AATT 8 cut(s) 13, 275, 500, 677, 1348, 1400, 1573, 1608
MluNI TGGCCA 1 cut(s) 848
MlyI GAGTC 2 cut(s) 467, 1669
MmeI TCCRAC 3 cut(s) 213, 528, 1358
Mox20I TGGCCA 1 cut(s) 848
MroNI GCCGGC 1 cut(s) 923
MroXI GAANNNNTTC 1 cut(s) 1586
MscI TGGCCA 1 cut(s) 848
MseI TTAA 3 cut(s) 450, 1011, 1452
Msp20I TGGCCA 1 cut(s) 848
MspA1I CMGCKG 2 cut(s) 673, 1252
MspI CCGG 5 cut(s) 37, 229, 313, 924, 945
MspR9I CCNGG 6 cut(s) 37, 113, 314, 329, 415, 1542
Mva1269I GAATGC 1 cut(s) 1477
MvaI CCWGG 4 cut(s) 113, 329, 415, 1542
MvnI CGCG 1 cut(s) 673
MwoI GCNNNNNNNGC 3 cut(s) 269, 845, 947
NaeI GCCGGC 1 cut(s) 925
NciI CCSGG 2 cut(s) 37, 314
NcoI CCATGG 2 cut(s) 774, 1211
NdeI CATATG 1 cut(s) 1365
NdeII GATC 7 cut(s) 474, 523, 966, 997, 1273, 1368, 1405
NgoMIV GCCGGC 1 cut(s) 923
NlaIV GGNNCC 8 cut(s) 41, 122, 224, 233, 412, 759, 817, 1153
NmeAIII GCCGAG 2 cut(s) 379, 1115
NspI RCATGY 1 cut(s) 1090
PaeR7I CTCGAG 1 cut(s) 1510
PciSI GCTCTTC 1 cut(s) 1200
PcsI WCGNNNNNNNCGW 1 cut(s) 1389
PctI GAATGC 1 cut(s) 1477
PdiI GCCGGC 1 cut(s) 925
PdmI GAANNNNTTC 1 cut(s) 1586
PfeI GAWTC 3 cut(s) 128, 304, 1498
PflMI CCANNNNNTGG 1 cut(s) 810
PfoI TCCNGGA 1 cut(s) 35
PkrI GCNGC 4 cut(s) 214, 592, 943, 1254
PleI GAGTC 2 cut(s) 466, 1668
PpsI GAGTC 2 cut(s) 466, 1668
Psp6I CCWGG 4 cut(s) 111, 327, 413, 1540
PspGI CCWGG 4 cut(s) 111, 327, 413, 1540
PspN4I GGNNCC 8 cut(s) 41, 122, 224, 233, 412, 759, 817, 1153
PspOMI GGGCCC 1 cut(s) 120
PspPI GGNCC 2 cut(s) 120, 121
PspXI VCTCGAGB 1 cut(s) 1510
PstNI CAGNNNCTG 1 cut(s) 1663
PsuI RGATCY 1 cut(s) 523
PvuII CAGCTG 1 cut(s) 1252
RsaI GTAC 3 cut(s) 311, 827, 1466
RsaNI GTAC 3 cut(s) 310, 826, 1465
SacII CCGCGG 1 cut(s) 674
SapI GCTCTTC 1 cut(s) 1200
SaqAI TTAA 3 cut(s) 450, 1011, 1452
SatI GCNGC 4 cut(s) 213, 591, 942, 1253
Sau3AI GATC 7 cut(s) 474, 523, 966, 997, 1273, 1368, 1405
Sau96I GGNCC 2 cut(s) 120, 121
SchI GAGTC 2 cut(s) 467, 1669
ScrFI CCNGG 6 cut(s) 37, 113, 314, 329, 415, 1542
SduI GDGCHC 3 cut(s) 124, 686, 882
SfcI CTRYAG 2 cut(s) 721, 1668
SfiI GGCCNNNNNGGCC 1 cut(s) 845
Sfr274I CTCGAG 1 cut(s) 1510
Sfr303I CCGCGG 1 cut(s) 674
SgrAI CRCCGGYG 1 cut(s) 944
SgrBI CCGCGG 1 cut(s) 674
SlaI CTCGAG 1 cut(s) 1510
SmlI CTYRAG 2 cut(s) 143, 1510
SmoI CTYRAG 2 cut(s) 143, 1510
Sse9I AATT 8 cut(s) 13, 275, 500, 677, 1348, 1400, 1573, 1608
SsiI CCGC 8 cut(s) 83, 212, 533, 590, 671, 673, 942, 959
SspI AATATT 1 cut(s) 985
SspMI CTAG 2 cut(s) 248, 462
StyD4I CCNGG 6 cut(s) 35, 111, 312, 327, 413, 1540
StyI CCWWGG 2 cut(s) 774, 1211
TaaI ACNGT 4 cut(s) 629, 1339, 1554, 1669
TaiI ACGT 2 cut(s) 69, 336
TaqI TCGA 5 cut(s) 96, 428, 624, 1415, 1511
TasI AATT 8 cut(s) 13, 275, 500, 677, 1348, 1400, 1573, 1608
TauI GCSGC 3 cut(s) 215, 593, 944
TfiI GAWTC 3 cut(s) 128, 304, 1498
Tru1I TTAA 3 cut(s) 450, 1011, 1452
Tru9I TTAA 3 cut(s) 450, 1011, 1452
TscAI CASTG 7 cut(s) 382, 815, 1070, 1330, 1482, 1530, 1557
TseI GCWGC 1 cut(s) 1252
TspDTI ATGAA 7 cut(s) 708, 723, 866, 1121, 1334, 1595, 1615
TspGWI ACGGA 4 cut(s) 152, 379, 813, 1159
TspRI CASTG 7 cut(s) 382, 815, 1070, 1330, 1482, 1530, 1557
Van91I CCANNNNNTGG 1 cut(s) 810
XapI RAATTY 4 cut(s) 1348, 1400, 1573, 1608
XbaI TCTAGA 1 cut(s) 461
XceI RCATGY 1 cut(s) 1090
XcmI CCANNNNNNNNNTGG 1 cut(s) 983
XhoI CTCGAG 1 cut(s) 1510
XmnI GAANNNNTTC 1 cut(s) 1586
XspI CTAG 2 cut(s) 248, 462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.