Rmu_sc0018428.1_g000005

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0018428.1
OG0000255
Physical Location & Seq
Reverse (-)
31019 .. 33019
2001 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0018428.1_g000005.1.cds

Sequence Viewer

Length: 2001 bp
atggctcttcttctcggtcctccatccctcaggcaatccccagccccggcggcccaagccccctccggcgacccattcatcgacctcatggtcgccgattacaacaacctggcccagcctccgatcaccaggccccaaatgggcttcaccgagaacgggtcagccacattcgtcaccaccggcgatccttgcctcgatctcttcttccacgtcgtccccaacactccggcgtcgtatctgaaccagcagctccctctggcctgggcccacaacgccctcaccaccctcaagctcatctgcaacctccgcggcgtacgtggcaccggcaagtctgacaaagaaggattctacacggcggcgttttggctccacaagaaccaccccaaaaccctagcctgcaacgtcgcgtccctcgccgagttcgggtatttcaaggacctgccggagattctgtaccgccttctagaaggtgaggatgtgaggaagaagctgaagtccgagtggctgcagaggaagtccggcaggggtagggttcggacggcggcggttccattctccagaggaggtcgcggcggcggcggtgctaaaaagagaaccaagagcggtggccggagaggaaacaacagccgtgtggctagggaggtgagggtgctgaactcaatggagagggcaaaatcggaaaaggaaaaggcctctgctttgcggaaggagaagttcgcagccatggccaagaaggctgttgagaggtaccagcgggacccggactacagattcttgcacgaacgggtttcggatcttttcgcagagtgcttgaaatcggatatggagaatttgaagtccaatcagtacaagaagattagccttgcggcgaaatggtgtccttctctggactcgtcttttgatcgtgctactctgctctgtgaaagcattgccaggaaggttttcgcaagagaatcgcatcaggaatatgaaggaattgaggatgcacattatgcttatagagtccgagaccggctgaggaaggatgtgttggtgccattgaggatagtgttggagttgccggaggtttatatgggtgccaatctgtggggtgccattccttacaacagagtggcctctgtggcgatgaagctttacaaggagaagttcttgaagcatgatggggagaggtttaagaagtatttggaggatgtcaaggcagggaagtctactattgcggccggtgctctgcttccgcatgagatcatagcctctctgaatgatggggatggagggcaggtggccgagcttcagtggaagagagtggtggatgacttgttgaaggagggcacgatgaagaactgcttggctgtgtgtgatgtgtccggaagcatgaatgggactcctatggatgtgtgtgttgctttgggaatgttggtggctgagttgaatgaggagccatggaaagggaaggtgatcacattcagtgccaatcctcagcttcacttgatacaaggcaatgatctaaggtccaagtctgagtttgtgaagcgaatggactggggaggcaacactgattttcagaaggtgtttgatttgatcctccaagtggctgtgaaggggaatctgaagccggagcaaatgattaagagggtgtttgttttcagtgacatggaatttgatcaggcttcgggttatggttatggttatggaggatatggatatgggcggttcggaagtaatgatgttccaaggggatgggagattgattatgaggtgattcagaggaagtacagggagaaagggtatggtgatgcggtgccacagatagtgttttggaatctaagggactcgaaggctactcccgtgcctgggactcaaccaggagtggcgctactgagtggcttctccaagaatttgctcaagctcttcttggataatgatggggagattcgccctgacacaaccatggaagcagcaatctcgggtccagagtatcagaagctggttgtgctggattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

666

Amino Acids

74.45

Weight (kDa)

9.16

Isoelectric Point (pI)

31.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1267
AasI GACNNNNNNGTC 1 cut(s) 89
Acc36I ACCTGC 2 cut(s) 447, 1267
Acc65I GGTACC 1 cut(s) 747
AccB1I GGYRCC 6 cut(s) 320, 747, 1033, 1076, 1091, 1798
AccB7I CCANNNNNTGG 1 cut(s) 1086
AccBSI CCGCTC 1 cut(s) 603
AccI GTMKAC 1 cut(s) 1208
AccII CGCG 3 cut(s) 309, 407, 570
AccIII TCCGGA 1 cut(s) 1364
AclWI GGATC 3 cut(s) 179, 801, 1573
AcoI YGGCCR 4 cut(s) 607, 726, 1218, 1281
AcsI RAATTY 3 cut(s) 829, 1655, 1894
AcuI CTGAAG 3 cut(s) 512, 1274, 1628
AcyI GRCGYC 1 cut(s) 230
AfaI GTAC 5 cut(s) 315, 455, 749, 848, 1772
AfiI CCNNNNNNNGG 9 cut(s) 46, 140, 156, 423, 1086, 1445, 1588, 1850, 1851
AgsI TTSAA 6 cut(s) 433, 814, 835, 1153, 1321, 1429
AjiI CACGTC 1 cut(s) 211
AjnI CCWGG 6 cut(s) 108, 128, 260, 932, 1849, 1861
AjuI GAANNNNNNNTTGG 4 cut(s) 1013, 1045, 1328, 1360
AluBI AGCT 8 cut(s) 250, 292, 490, 1132, 1288, 1480, 1906, 1984
AluI AGCT 8 cut(s) 250, 292, 490, 1132, 1288, 1480, 1906, 1984
Alw21I GWGCWC 1 cut(s) 1228
Alw26I GTCTC 1 cut(s) 1002
AlwI GGATC 3 cut(s) 179, 801, 1573
AlwNI CAGNNNCTG 1 cut(s) 1984
Ama87I CYCGRG 1 cut(s) 1963
Aor13HI TCCGGA 1 cut(s) 1364
ApaI GGGCCC 1 cut(s) 268
ApeKI GCWGC 4 cut(s) 247, 505, 719, 1955
ApoI RAATTY 3 cut(s) 829, 1655, 1894
ArsI GACNNNNNNTTYG 4 cut(s) 881, 913, 1640, 1672
Asp700I GAANNNNTTC 1 cut(s) 941
Asp718I GGTACC 1 cut(s) 747
AspLEI GCGC 1 cut(s) 1873
AsuC2I CCSGG 2 cut(s) 47, 761
AsuHPI GGTGA 9 cut(s) 118, 139, 166, 271, 482, 655, 1465, 1768, 1802
AvaI CYCGRG 1 cut(s) 1963
AvaII GGWCC 5 cut(s) 17, 436, 757, 1509, 1967
AxyI CCTNAGG 1 cut(s) 29
BaeGI GKGCMC 2 cut(s) 268, 1331
BalI TGGCCA 1 cut(s) 728
BanI GGYRCC 6 cut(s) 320, 747, 1033, 1076, 1091, 1798
BanII GRGCYC 1 cut(s) 268
Bbv12I GWGCWC 1 cut(s) 1228
BbvCI CCTCAGC 2 cut(s) 1016, 1476
BbvI GCAGC 4 cut(s) 259, 492, 731, 1967
BccI CCATC 6 cut(s) 31, 1154, 1256, 1262, 1731, 1916
BceAI ACGGC 3 cut(s) 369, 555, 612
BcgI CGANNNNNNTGC 4 cut(s) 936, 970, 1944, 1978
BciT130I CCWGG 6 cut(s) 110, 130, 262, 934, 1851, 1863
BclI TGATCA 2 cut(s) 1455, 1660
BcnI CCSGG 2 cut(s) 47, 761
BcoDI GTCTC 1 cut(s) 1002
BfaI CTAG 3 cut(s) 392, 464, 636
BfmI CTRYAG 2 cut(s) 506, 766
BfoI RGCGCY 1 cut(s) 1874
BfuAI ACCTGC 2 cut(s) 447, 1267
BglI GCCNNNNNGGC 3 cut(s) 50, 734, 1121
Bme1390I CCNGG 8 cut(s) 47, 110, 130, 262, 761, 934, 1851, 1863
Bme18I GGWCC 5 cut(s) 17, 436, 757, 1509, 1967
BmeT110I CYCGRG 1 cut(s) 1963
BmgBI CACGTC 1 cut(s) 211
BmrFI CCNGG 8 cut(s) 47, 110, 130, 262, 761, 934, 1851, 1863
BmrI ACTGGG 1 cut(s) 1549
BmsI GCATC 3 cut(s) 967, 973, 1783
BmuI ACTGGG 1 cut(s) 1549
BpmI CTGGAG 1 cut(s) 541
Bpu10I CCTNAGC 2 cut(s) 1016, 1476
BpuEI CTTGAG 2 cut(s) 272, 1886
BpuMI CCSGG 2 cut(s) 47, 761
BsaAI YACGTR 1 cut(s) 317
BsaHI GRCGYC 1 cut(s) 230
BsaI GGTCTC 1 cut(s) 1002
BsaJI CCNNGG 8 cut(s) 45, 261, 307, 723, 1439, 1730, 1850, 1947
BsaWI WCCGGW 1 cut(s) 1364
BsaXI ACNNNNNCTCC 6 cut(s) 437, 467, 1263, 1293, 1769, 1799
Bsc4I CCNNNNNNNGG 9 cut(s) 46, 140, 156, 423, 1086, 1445, 1588, 1850, 1851
Bse118I RCCGGY 4 cut(s) 179, 323, 1011, 1220
Bse1I ACTGG 1 cut(s) 1544
Bse21I CCTNAGG 1 cut(s) 29
Bse3DI GCAATG 2 cut(s) 927, 1504
BseAI TCCGGA 1 cut(s) 1364
BseBI CCWGG 6 cut(s) 110, 130, 262, 934, 1851, 1863
BseDI CCNNGG 8 cut(s) 45, 261, 307, 723, 1439, 1730, 1850, 1947
BseGI GGATG 9 cut(s) 23, 481, 988, 1030, 1195, 1273, 1315, 1396, 1742
BseLI CCNNNNNNNGG 9 cut(s) 46, 140, 156, 423, 1086, 1445, 1588, 1850, 1851
BseMI GCAATG 2 cut(s) 927, 1504
BseMII CTCAG 6 cut(s) 43, 1007, 1413, 1490, 1509, 1868
BseNI ACTGG 1 cut(s) 1544
BseRI GAGGAG 2 cut(s) 576, 1448
BseSI GKGCMC 2 cut(s) 268, 1331
BseX3I CGGCCG 1 cut(s) 1218
BseXI GCAGC 4 cut(s) 259, 492, 731, 1967
BseYI CCCAGC 2 cut(s) 40, 114
Bsh1236I CGCG 3 cut(s) 309, 407, 570
Bsh1285I CGRYCG 1 cut(s) 1221
BshNI GGYRCC 6 cut(s) 320, 747, 1033, 1076, 1091, 1798
BsiEI CGRYCG 1 cut(s) 1221
BsiHKAI GWGCWC 1 cut(s) 1228
BsiHKCI CYCGRG 1 cut(s) 1963
BsiWI CGTACG 1 cut(s) 313
BslFI GGGAC 6 cut(s) 200, 394, 770, 1393, 1841, 1867
BslI CCNNNNNNNGG 9 cut(s) 46, 140, 156, 423, 1086, 1445, 1588, 1850, 1851
BsmAI GTCTC 1 cut(s) 1002
BsmFI GGGAC 6 cut(s) 200, 394, 770, 1393, 1841, 1867
Bso31I GGTCTC 1 cut(s) 1002
BsoBI CYCGRG 1 cut(s) 1963
Bsp120I GGGCCC 1 cut(s) 264
Bsp1286I GDGCHC 3 cut(s) 268, 1228, 1331
Bsp13I TCCGGA 1 cut(s) 1364
Bsp19I CCATGG 3 cut(s) 723, 1439, 1947
BspCNI CTCAG 6 cut(s) 42, 1008, 1414, 1489, 1510, 1869
BspEI TCCGGA 1 cut(s) 1364
BspFNI CGCG 3 cut(s) 309, 407, 570
BspMAI CTGCAG 1 cut(s) 510
BspMI ACCTGC 2 cut(s) 447, 1267
BspPI GGATC 3 cut(s) 179, 801, 1573
BspQI GCTCTTC 2 cut(s) 12, 1913
BspT107I GGYRCC 6 cut(s) 320, 747, 1033, 1076, 1091, 1798
BspTNI GGTCTC 1 cut(s) 1002
BsrBI CCGCTC 1 cut(s) 603
BsrDI GCAATG 2 cut(s) 927, 1504
BsrFI RCCGGY 4 cut(s) 179, 323, 1011, 1220
BsrI ACTGG 1 cut(s) 1544
BssAI RCCGGY 4 cut(s) 179, 323, 1011, 1220
BssECI CCNNGG 8 cut(s) 45, 261, 307, 723, 1439, 1730, 1850, 1947
BssNI GRCGYC 1 cut(s) 230
BssT1I CCWWGG 4 cut(s) 723, 1439, 1730, 1947
Bst2UI CCWGG 6 cut(s) 110, 130, 262, 934, 1851, 1863
Bst6I CTCTTC 4 cut(s) 12, 206, 1292, 1913
BstACI GRCGYC 1 cut(s) 230
BstAPI GCANNNNNTGC 1 cut(s) 992
BstBAI YACGTR 1 cut(s) 317
BstC8I GCNNGC 1 cut(s) 397
BstDEI CTNAG 8 cut(s) 29, 1016, 1422, 1476, 1505, 1518, 1823, 1877
BstDSI CCRYGG 4 cut(s) 307, 723, 1439, 1947
BstF5I GGATG 9 cut(s) 23, 481, 988, 1030, 1195, 1273, 1315, 1396, 1742
BstFNI CGCG 3 cut(s) 309, 407, 570
BstH2I RGCGCY 1 cut(s) 1874
BstHHI GCGC 1 cut(s) 1873
BstMAI GTCTC 1 cut(s) 1002
BstMCI CGRYCG 1 cut(s) 1221
BstNI CCWGG 6 cut(s) 110, 130, 262, 934, 1851, 1863
BstSCI CCNGG 8 cut(s) 45, 108, 128, 260, 759, 932, 1849, 1861
BstSFI CTRYAG 2 cut(s) 506, 766
BstSLI GKGCMC 2 cut(s) 268, 1331
BstUI CGCG 3 cut(s) 309, 407, 570
BstV1I GCAGC 4 cut(s) 259, 492, 731, 1967
BstX2I RGATCY 1 cut(s) 793
BstXI CCANNNNNNTGG 1 cut(s) 1737
BstYI RGATCY 1 cut(s) 793
BstZI CGGCCG 1 cut(s) 1218
Bsu36I CCTNAGG 1 cut(s) 29
BtgI CCRYGG 4 cut(s) 307, 723, 1439, 1947
BtgZI GCGATG 1 cut(s) 1139
BtrI CACGTC 1 cut(s) 211
BtsCI GGATG 9 cut(s) 23, 481, 988, 1030, 1195, 1273, 1315, 1396, 1742
BtsIMutI CAGTG 4 cut(s) 1298, 1471, 1551, 1651
BveI ACCTGC 2 cut(s) 447, 1267
Cac8I GCNNGC 1 cut(s) 397
CaiI CAGNNNCTG 1 cut(s) 1984
CfoI GCGC 1 cut(s) 1873
Cfr10I RCCGGY 4 cut(s) 179, 323, 1011, 1220
Cfr42I CCGCGG 1 cut(s) 310
CseI GACGC 2 cut(s) 219, 396
Csp6I GTAC 5 cut(s) 314, 454, 748, 847, 1771
CspCI CAANNNNNGTGG 2 cut(s) 586, 621
CviAII CATG 8 cut(s) 88, 724, 1157, 1238, 1372, 1440, 1651, 1948
CviQI GTAC 5 cut(s) 314, 454, 748, 847, 1771
DdeI CTNAG 8 cut(s) 29, 1016, 1422, 1476, 1505, 1518, 1823, 1877
DrdI GACNNNNNNGTC 1 cut(s) 89
DseDI GACNNNNNNGTC 1 cut(s) 89
EaeI YGGCCR 4 cut(s) 607, 726, 1218, 1281
EagI CGGCCG 1 cut(s) 1218
Eam1104I CTCTTC 4 cut(s) 12, 206, 1292, 1913
EarI CTCTTC 4 cut(s) 12, 206, 1292, 1913
EclXI CGGCCG 1 cut(s) 1218
Eco130I CCWWGG 4 cut(s) 723, 1439, 1730, 1947
Eco147I AGGCCT 1 cut(s) 692
Eco24I GRGCYC 1 cut(s) 268
Eco31I GGTCTC 1 cut(s) 1002
Eco47I GGWCC 5 cut(s) 17, 436, 757, 1509, 1967
Eco52I CGGCCG 1 cut(s) 1218
Eco57I CTGAAG 3 cut(s) 512, 1274, 1628
Eco81I CCTNAGG 1 cut(s) 29
Eco88I CYCGRG 1 cut(s) 1963
EcoO109I RGGNCCY 3 cut(s) 132, 436, 757
EcoRII CCWGG 6 cut(s) 108, 128, 260, 932, 1849, 1861
EcoT14I CCWWGG 4 cut(s) 723, 1439, 1730, 1947
EcoT38I GRGCYC 1 cut(s) 268
ErhI CCWWGG 4 cut(s) 723, 1439, 1730, 1947
FaeI CATG 8 cut(s) 91, 727, 1160, 1241, 1375, 1443, 1654, 1951
FalI AAGNNNNNCTT 4 cut(s) 1328, 1360, 1895, 1927
FaqI GGGAC 6 cut(s) 200, 394, 770, 1393, 1841, 1867
FatI CATG 8 cut(s) 87, 723, 1156, 1237, 1371, 1439, 1650, 1947
FauI CCCGC 1 cut(s) 747
FbaI TGATCA 2 cut(s) 1455, 1660
FblI GTMKAC 1 cut(s) 1208
FokI GGATG 9 cut(s) 10, 488, 995, 1037, 1202, 1280, 1322, 1403, 1749
FriOI GRGCYC 1 cut(s) 268
FspBI CTAG 3 cut(s) 392, 464, 636
GlaI GCGC 1 cut(s) 1872
GsaI CCCAGC 2 cut(s) 44, 118
GsuI CTGGAG 1 cut(s) 541
HaeII RGCGCY 1 cut(s) 1874
HgaI GACGC 2 cut(s) 219, 396
HhaI GCGC 1 cut(s) 1873
Hin1I GRCGYC 1 cut(s) 230
Hin1II CATG 8 cut(s) 91, 727, 1160, 1241, 1375, 1443, 1654, 1951
Hin6I GCGC 1 cut(s) 1871
HinP1I GCGC 1 cut(s) 1871
HindIII AAGCTT 1 cut(s) 1130
HphI GGTGA 9 cut(s) 118, 139, 166, 271, 482, 655, 1465, 1768, 1802
Hpy166II GTNNAC 1 cut(s) 1209
Hpy188III TCNNGA 7 cut(s) 464, 558, 887, 962, 1150, 1365, 1970
Hpy8I GTNNAC 1 cut(s) 1209
Hpy99I CGWCG 3 cut(s) 215, 235, 407
HpyCH4IV ACGT 3 cut(s) 210, 316, 402
HpyCH4V TGCA 5 cut(s) 300, 399, 508, 778, 986
HpyF3I CTNAG 8 cut(s) 29, 1016, 1422, 1476, 1505, 1518, 1823, 1877
HpySE526I ACGT 3 cut(s) 210, 316, 402
Hsp92I GRCGYC 1 cut(s) 230
Hsp92II CATG 8 cut(s) 91, 727, 1160, 1241, 1375, 1443, 1654, 1951
HspAI GCGC 1 cut(s) 1871
KflI GGGWCCC 1 cut(s) 757
Kpn2I TCCGGA 1 cut(s) 1364
KpnI GGTACC 1 cut(s) 751
Ksp22I TGATCA 2 cut(s) 1455, 1660
KspI CCGCGG 1 cut(s) 310
LguI GCTCTTC 2 cut(s) 12, 1913
LmnI GCTCC 4 cut(s) 255, 372, 1435, 1615
Lsp1109I GCAGC 4 cut(s) 259, 492, 731, 1967
LweI GCATC 3 cut(s) 967, 973, 1783
MaeI CTAG 3 cut(s) 392, 464, 636
MaeII ACGT 3 cut(s) 210, 316, 402
MaeIII GTNAC 2 cut(s) 172, 1646
MbiI CCGCTC 1 cut(s) 603
MboII GAAGA 7 cut(s) 193, 196, 496, 865, 1309, 1348, 1900
MflI RGATCY 1 cut(s) 793
MhlI GDGCHC 3 cut(s) 268, 1228, 1331
MlsI TGGCCA 1 cut(s) 728
MluCI AATT 4 cut(s) 829, 975, 1655, 1894
MluNI TGGCCA 1 cut(s) 728
MlyI GAGTC 5 cut(s) 884, 1011, 1375, 1823, 1849
MmeI TCCRAC 1 cut(s) 1032
Mox20I TGGCCA 1 cut(s) 728
MroI TCCGGA 1 cut(s) 1364
MroXI GAANNNNTTC 1 cut(s) 941
MscI TGGCCA 1 cut(s) 728
MseI TTAA 2 cut(s) 1173, 1626
MslI CAYNNNNRTG 1 cut(s) 1946
Msp20I TGGCCA 1 cut(s) 728
MspA1I CMGCKG 2 cut(s) 309, 754
MspR9I CCNGG 8 cut(s) 47, 110, 130, 262, 761, 934, 1851, 1863
MvaI CCWGG 6 cut(s) 110, 130, 262, 934, 1851, 1863
MvnI CGCG 3 cut(s) 309, 407, 570
NciI CCSGG 2 cut(s) 47, 761
NcoI CCATGG 3 cut(s) 723, 1439, 1947
NlaIII CATG 8 cut(s) 91, 727, 1160, 1241, 1375, 1443, 1654, 1951
NmeAIII GCCGAG 2 cut(s) 442, 1309
NmuCI GTSAC 2 cut(s) 172, 1646
PaqCI CACCTGC 1 cut(s) 1267
PceI AGGCCT 1 cut(s) 692
PciSI GCTCTTC 2 cut(s) 12, 1913
PdmI GAANNNNTTC 1 cut(s) 941
PfeI GAWTC 8 cut(s) 345, 448, 771, 953, 1603, 1759, 1819, 1930
Pfl23II CGTACG 1 cut(s) 313
PflMI CCANNNNNTGG 1 cut(s) 1086
PleI GAGTC 5 cut(s) 884, 1010, 1375, 1823, 1849
PpsI GAGTC 5 cut(s) 884, 1010, 1375, 1823, 1849
Ppu21I YACGTR 1 cut(s) 317
PpuMI RGGWCCY 2 cut(s) 436, 757
Psp5II RGGWCCY 2 cut(s) 436, 757
Psp6I CCWGG 6 cut(s) 108, 128, 260, 932, 1849, 1861
PspFI CCCAGC 2 cut(s) 40, 114
PspGI CCWGG 6 cut(s) 108, 128, 260, 932, 1849, 1861
PspLI CGTACG 1 cut(s) 313
PspOMI GGGCCC 1 cut(s) 264
PspPPI RGGWCCY 2 cut(s) 436, 757
PstI CTGCAG 1 cut(s) 510
PstNI CAGNNNCTG 1 cut(s) 1984
PsuI RGATCY 1 cut(s) 793
RsaI GTAC 5 cut(s) 315, 455, 749, 848, 1772
RsaNI GTAC 5 cut(s) 314, 454, 748, 847, 1771
RseI CAYNNNNRTG 1 cut(s) 1946
SacII CCGCGG 1 cut(s) 310
SapI GCTCTTC 2 cut(s) 12, 1913
SaqAI TTAA 2 cut(s) 1173, 1626
SchI GAGTC 5 cut(s) 884, 1011, 1375, 1823, 1849
ScrFI CCNGG 8 cut(s) 47, 110, 130, 262, 761, 934, 1851, 1863
SduI GDGCHC 3 cut(s) 268, 1228, 1331
SfaNI GCATC 3 cut(s) 967, 973, 1783
SfcI CTRYAG 2 cut(s) 506, 766
Sfr303I CCGCGG 1 cut(s) 310
SgrAI CRCCGGYG 1 cut(s) 179
SgrBI CCGCGG 1 cut(s) 310
SinI GGWCC 5 cut(s) 17, 436, 757, 1509, 1967
SmiMI CAYNNNNRTG 1 cut(s) 1946
SmlI CTYRAG 2 cut(s) 287, 1901
SmoI CTYRAG 2 cut(s) 287, 1901
Sse9I AATT 4 cut(s) 829, 975, 1655, 1894
SseBI AGGCCT 1 cut(s) 692
SspMI CTAG 3 cut(s) 392, 464, 636
StuI AGGCCT 1 cut(s) 692
StyD4I CCNGG 8 cut(s) 45, 108, 128, 260, 759, 932, 1849, 1861
StyI CCWWGG 4 cut(s) 723, 1439, 1730, 1947
TaiI ACGT 3 cut(s) 213, 319, 405
TaqI TCGA 3 cut(s) 81, 195, 1832
TaqII GACCGA 1 cut(s) 5
TasI AATT 4 cut(s) 829, 975, 1655, 1894
TatI WGTACW 2 cut(s) 846, 1770
TauI GCSGC 9 cut(s) 53, 312, 359, 545, 573, 576, 579, 869, 1220
TfiI GAWTC 8 cut(s) 345, 448, 771, 953, 1603, 1759, 1819, 1930
Tru1I TTAA 2 cut(s) 1173, 1626
Tru9I TTAA 2 cut(s) 1173, 1626
TscAI CASTG 4 cut(s) 1298, 1471, 1558, 1651
TseFI GTSAC 2 cut(s) 172, 1646
TseI GCWGC 4 cut(s) 247, 505, 719, 1955
Tsp45I GTSAC 2 cut(s) 172, 1646
TspDTI ATGAA 5 cut(s) 67, 984, 1142, 1349, 1388
TspRI CASTG 4 cut(s) 1298, 1471, 1558, 1651
Van91I CCANNNNNTGG 1 cut(s) 1086
VpaK11BI GGWCC 5 cut(s) 17, 436, 757, 1509, 1967
XapI RAATTY 3 cut(s) 829, 1655, 1894
XbaI TCTAGA 1 cut(s) 463
XcmI CCANNNNNNNNNTGG 1 cut(s) 136
XmiI GTMKAC 1 cut(s) 1208
XmnI GAANNNNTTC 1 cut(s) 941
XspI CTAG 3 cut(s) 392, 464, 636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.