Rw7G018770

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000255
Physical Location & Seq
Reverse (-)
20491288 .. 20493277
1990 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G018770.1

Sequence Viewer

Length: 1866 bp
ATGGCAGCTCCTCCAAAACTTCTTCTTGGTCCTCCAGGACCCAAACCTTCAGACTCCACCACCACCACCACAACGAAACCTCTGTTGGGACGCACCGAGAACAACTCCGCCACCAACCTCTCCTCCGGCAACCCCTGCCTCGACCTCTTCTTCCACATCGTACCCGACACCCCGTCCTCTTACATCAACGAACAACTTCCCAAGTCCTGGGCCCACAACGCCCTAACCACCCTCAAGCTAATCTGCAACCTCCGCGGCGTCCGCGGCACCGGAAAGTCCGACAAAGAAGCCTTCTTCACGGCAGCATTCTGGCTCCACAGACACCACCCCAAAACCCTAGCCTGCAATCTCGACTCTTTCGCCCAATTCGGGTGCTTCAAAGACCTCCCCGAGATTCTCTACCGCCTTCTAGAAGGCCAAGACATAAGGAAGAACCGCAAGGCCGAGTCATACTCAAGAGATAGAGATAGCAACTGTACGTCTCGATCAAGAACACGATCTCGGTCGCCCCCGCAGCGGCGGAGGTCAGGTTTTAAGTCGAGAACCAACAAAAGGAAGAGGCTGAGTTACACCACCCGGAAGGAGCCGAGGGAGGAGAGGGTGGTGAAGGCGACGGAGAGGACAAACTCGGAAAAGGAAAAGGCAAGTGTTTTGAGAAAACAGAAATTCACTGACATGGCAAACAAGGCCGTCTCGAGATACGATCGCGACCCGGATTACCGGTTCCTCCACGAGCGCGTCTCGGATCTCTTTGCCGCTTGCTTGAAATCCGACCTCGAAAATCTCAACTCTAATGAGCTCAACAACATCAGCCTCGCCGCCAAGTGGTGCCCTTCGCTCGACTCGTCTTTTGATCGCGCCACTCTCCTCTGCGAAAGGATTGCAAAGAAGGTTTTCCCGCGCGAGTCGTGTCCGGAATACGACGGCGTTTTGGAGCAGCATTATGCTTACAGAGTCCGGGACCGGCTGAGGAAGGAAGTGCTTGTTCCTTTAAGGAAGGCTCTGGAGTTACCGGAGGTTTACATAGGGGCACGAAAATGGAGGTCCCTTCCTTACAATAGGGTCCCCTCCGTGGCCATGAAGCTTTACAAGGAAACGTTTTTTAAGCAAGACCTTGTGAGGTTTTCGAAGTATTTGGTTGATGCAAAGGCCGGGAAGACCACCATTGCGGCTGGTGCTCTGCTGCCGCACGAGATCATTGCCTCGAATTCAAGAGGCAGTGATGGCGTGGCGGAGCTTCAGTGGAAGAGGATGGTGGAGGATTTGGTGAAGAAGGGGCAGCTGAAGAACTGCTTGGCTGTGTGTGACGTGTCAGGCAGCATGGAGGGGCTTCCTATGGATGTGAGTGTGGCCTTGGGGCTTTTGGTTTCGGAATTAAGTGAAAAGCCGTGGAAAGGGAAGGTCATCACTTTTAGTGAGAAGCCTGAGCTGCATTTGATTGAAGGTGAAGATTTGAAGTCAAAGTGTAAGTTTATGAGGTCAATGCACTCGGGGTTCAACACCGATTTTCAAAAGGTGTTTGATCTGATACTTAGAGTGGCTGTGAAGGGGAACTTGAAGCCTGAGGATATGATAAAGAGGGTGTTTGTGTTTAGTGACATGGAGTTTGATGAGGCTAATCATGAGAGTACTTGGGAGACGGATTATGAGGCGATTCAGAGGAGGTTCAAGAGGAATGGTTATGGGAATGAGGTGCCTCAGATTGTGTTTTGGAATCTGAGGCACTCTATGTCTACGCCGGTGACGGAGAAGCAACCTGGGGTGGCAATGTTGAGTGGCTTTTCAAAGAATTTGTTGAACCCGGATATGGCCATGGAGTTGGCCATCTCCGGCGATGAGTATCAGAAGCTGGCTGTGGTCGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

621

Amino Acids

70.77

Weight (kDa)

9.41

Isoelectric Point (pI)

45.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 32 - 428 7.9e-134 Domain of unknown function (DUF2828)
DUF7788 PF25043 430 - 600 1.9e-75 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 266, 828, 1693
AccB7I CCANNNNNTGG 1 cut(s) 207
AccI GTMKAC 2 cut(s) 1733, 1860
AccII CGCG 7 cut(s) 255, 264, 708, 738, 858, 901, 903
AccIII TCCGGA 1 cut(s) 913
AclI AACGTT 1 cut(s) 1097
AclWI GGATC 1 cut(s) 753
AcoI YGGCCR 3 cut(s) 1074, 1809, 1821
AcsI RAATTY 3 cut(s) 665, 1207, 1789
AcuI CTGAAG 3 cut(s) 33, 1223, 1304
AcyI GRCGYC 1 cut(s) 258
AfaI GTAC 3 cut(s) 162, 478, 1630
AfiI CCNNNNNNNGG 9 cut(s) 86, 207, 369, 516, 552, 825, 1072, 1394, 1807
AflIII ACRYGT 1 cut(s) 1308
AgeI ACCGGT 1 cut(s) 720
AhdI GACNNNNNGTC 1 cut(s) 172
AjiI CACGTC 1 cut(s) 1309
AjnI CCWGG 3 cut(s) 34, 206, 1756
AjuI GAANNNNNNNTTGG 4 cut(s) 68, 100, 1277, 1309
AloI GAACNNNNNNTCC 2 cut(s) 707, 739
AluBI AGCT 8 cut(s) 8, 238, 799, 1084, 1237, 1282, 1429, 1849
AluI AGCT 8 cut(s) 8, 238, 799, 1084, 1237, 1282, 1429, 1849
Alw21I GWGCWC 2 cut(s) 801, 1180
Alw26I GTCTC 4 cut(s) 486, 697, 745, 1631
AlwI GGATC 1 cut(s) 753
AlwNI CAGNNNCTG 1 cut(s) 1849
Ama87I CYCGRG 3 cut(s) 389, 694, 1489
Aor13HI TCCGGA 1 cut(s) 913
AoxI GGCC 9 cut(s) 210, 415, 441, 687, 1074, 1149, 1350, 1809, 1821
ApaI GGGCCC 1 cut(s) 214
ApeKI GCWGC 8 cut(s) 5, 302, 514, 937, 1183, 1279, 1317, 1429
ApoI RAATTY 3 cut(s) 665, 1207, 1789
ArsI GACNNNNNNTTYG 4 cut(s) 833, 865, 1589, 1621
AsiGI ACCGGT 1 cut(s) 720
Asp700I GAANNNNTTC 2 cut(s) 195, 893
AspLEI GCGC 3 cut(s) 738, 860, 903
AspS9I GGNCC 7 cut(s) 29, 38, 210, 211, 961, 1044, 1063
AsuC2I CCSGG 5 cut(s) 577, 713, 959, 1153, 1802
AsuHPI GGTGA 4 cut(s) 616, 1279, 1457, 1753
AsuII TTCGAA 1 cut(s) 1127
AvaI CYCGRG 3 cut(s) 389, 694, 1489
AvaII GGWCC 5 cut(s) 29, 38, 961, 1044, 1063
AxyI CCTNAGG 1 cut(s) 1563
BaeGI GKGCMC 3 cut(s) 214, 833, 1033
BalI TGGCCA 3 cut(s) 1076, 1811, 1823
BanI GGYRCC 3 cut(s) 266, 828, 1693
BanII GRGCYC 2 cut(s) 214, 801
BauI CACGAG 2 cut(s) 731, 1190
BbsI GAAGAC 1 cut(s) 1163
Bbv12I GWGCWC 2 cut(s) 801, 1180
BbvCI CCTCAGC 1 cut(s) 968
BbvI GCAGC 8 cut(s) 17, 314, 526, 949, 1170, 1291, 1329, 1416
BccI CCATC 3 cut(s) 1217, 1246, 1832
BceAI ACGGC 4 cut(s) 315, 674, 940, 1372
BcgI CGANNNNNNTGC 4 cut(s) 863, 897, 1181, 1215
BciT130I CCWGG 3 cut(s) 36, 208, 1758
BcnI CCSGG 5 cut(s) 577, 713, 959, 1153, 1802
BcoDI GTCTC 4 cut(s) 486, 697, 745, 1631
BfaI CTAG 2 cut(s) 338, 410
BmcAI AGTACT 1 cut(s) 1630
Bme1390I CCNGG 8 cut(s) 36, 208, 577, 713, 959, 1153, 1758, 1802
Bme18I GGWCC 5 cut(s) 29, 38, 961, 1044, 1063
BmeRI GACNNNNNGTC 1 cut(s) 172
BmeT110I CYCGRG 3 cut(s) 389, 694, 1489
BmgBI CACGTC 1 cut(s) 1309
BmgT120I GGNCC 7 cut(s) 29, 38, 210, 211, 961, 1044, 1063
BmrFI CCNGG 8 cut(s) 36, 208, 577, 713, 959, 1153, 1758, 1802
BmsI GCATC 1 cut(s) 1132
BpiI GAAGAC 1 cut(s) 1163
BplI GAGNNNNNCTC 6 cut(s) 89, 121, 437, 469, 725, 757
BpmI CTGGAG 2 cut(s) 18, 1025
Bpu10I CCTNAGC 2 cut(s) 968, 1425
Bpu14I TTCGAA 1 cut(s) 1127
BpuEI CTTGAG 2 cut(s) 218, 439
BpuMI CCSGG 5 cut(s) 577, 713, 959, 1153, 1802
BsaBI GATNNNNATC 1 cut(s) 1839
BsaHI GRCGYC 1 cut(s) 258
BsaJI CCNNGG 9 cut(s) 207, 253, 262, 587, 1071, 1353, 1388, 1757, 1812
BsaWI WCCGGW 4 cut(s) 269, 720, 913, 1012
BsaXI ACNNNNNCTCC 6 cut(s) 107, 137, 514, 544, 1226, 1256
Bsc4I CCNNNNNNNGG 9 cut(s) 86, 207, 369, 516, 552, 825, 1072, 1394, 1807
Bse118I RCCGGY 3 cut(s) 720, 963, 1738
Bse21I CCTNAGG 1 cut(s) 1563
Bse3DI GCAATG 3 cut(s) 1164, 1197, 1773
Bse8I GATNNNNATC 1 cut(s) 1839
BseAI TCCGGA 1 cut(s) 913
BseBI CCWGG 3 cut(s) 36, 208, 1758
BseDI CCNNGG 9 cut(s) 207, 253, 262, 587, 1071, 1353, 1388, 1757, 1812
BseGI GGATG 2 cut(s) 1257, 1345
BseJI GATNNNNATC 1 cut(s) 1839
BseLI CCNNNNNNNGG 9 cut(s) 86, 207, 369, 516, 552, 825, 1072, 1394, 1807
BseMI GCAATG 3 cut(s) 1164, 1197, 1773
BseMII CTCAG 6 cut(s) 554, 959, 1416, 1554, 1709, 1712
BseRI GAGGAG 4 cut(s) 112, 608, 857, 1675
BseSI GKGCMC 3 cut(s) 214, 833, 1033
BseXI GCAGC 8 cut(s) 17, 314, 526, 949, 1170, 1291, 1329, 1416
Bsh1236I CGCG 7 cut(s) 255, 264, 708, 738, 858, 901, 903
Bsh1285I CGRYCG 2 cut(s) 506, 706
BshFI GGCC 9 cut(s) 212, 417, 443, 689, 1076, 1151, 1352, 1811, 1823
BshNI GGYRCC 3 cut(s) 266, 828, 1693
BshTI ACCGGT 1 cut(s) 720
BsiEI CGRYCG 2 cut(s) 506, 706
BsiHKAI GWGCWC 2 cut(s) 801, 1180
BsiHKCI CYCGRG 3 cut(s) 389, 694, 1489
BslFI GGGAC 4 cut(s) 102, 974, 1030, 1049
BslI CCNNNNNNNGG 9 cut(s) 86, 207, 369, 516, 552, 825, 1072, 1394, 1807
BsmAI GTCTC 4 cut(s) 486, 697, 745, 1631
BsmBI CGTCTC 4 cut(s) 486, 697, 745, 1631
BsmFI GGGAC 4 cut(s) 102, 974, 1030, 1049
BsmI GAATGC 1 cut(s) 305
BsnI GGCC 9 cut(s) 212, 417, 443, 689, 1076, 1151, 1352, 1811, 1823
BsoBI CYCGRG 3 cut(s) 389, 694, 1489
Bsp119I TTCGAA 1 cut(s) 1127
Bsp120I GGGCCC 1 cut(s) 210
Bsp1286I GDGCHC 5 cut(s) 214, 801, 833, 1033, 1180
Bsp13I TCCGGA 1 cut(s) 913
Bsp143I GATC 7 cut(s) 485, 497, 703, 745, 853, 1194, 1522
Bsp19I CCATGG 1 cut(s) 1812
Bsp68I TCGCGA 1 cut(s) 708
BspANI GGCC 9 cut(s) 212, 417, 443, 689, 1076, 1151, 1352, 1811, 1823
BspCNI CTCAG 6 cut(s) 555, 960, 1417, 1555, 1710, 1711
BspEI TCCGGA 1 cut(s) 913
BspFNI CGCG 7 cut(s) 255, 264, 708, 738, 858, 901, 903
BspHI TCATGA 1 cut(s) 1621
BspPI GGATC 1 cut(s) 753
BspT104I TTCGAA 1 cut(s) 1127
BspT107I GGYRCC 3 cut(s) 266, 828, 1693
BsrDI GCAATG 3 cut(s) 1164, 1197, 1773
BsrFI RCCGGY 3 cut(s) 720, 963, 1738
BssAI RCCGGY 3 cut(s) 720, 963, 1738
BssECI CCNNGG 9 cut(s) 207, 253, 262, 587, 1071, 1353, 1388, 1757, 1812
BssMI GATC 7 cut(s) 485, 497, 703, 745, 853, 1194, 1522
BssNI GRCGYC 1 cut(s) 258
BssSI CACGAG 2 cut(s) 731, 1190
BssT1I CCWWGG 2 cut(s) 1353, 1812
Bst2BI CACGAG 2 cut(s) 731, 1190
Bst2UI CCWGG 3 cut(s) 36, 208, 1758
Bst4CI ACNGT 1 cut(s) 476
Bst6I CTCTTC 3 cut(s) 152, 551, 1241
BstACI GRCGYC 1 cut(s) 258
BstAPI GCANNNNNTGC 1 cut(s) 135
BstBI TTCGAA 1 cut(s) 1127
BstC8I GCNNGC 3 cut(s) 343, 760, 1851
BstDEI CTNAG 7 cut(s) 563, 968, 1425, 1532, 1563, 1698, 1718
BstDSI CCRYGG 5 cut(s) 253, 262, 1071, 1388, 1812
BstF5I GGATG 2 cut(s) 1257, 1345
BstFNI CGCG 7 cut(s) 255, 264, 708, 738, 858, 901, 903
BstHHI GCGC 3 cut(s) 738, 860, 903
BstKTI GATC 7 cut(s) 488, 500, 706, 748, 856, 1197, 1525
BstMAI GTCTC 4 cut(s) 486, 697, 745, 1631
BstMBI GATC 7 cut(s) 485, 497, 703, 745, 853, 1194, 1522
BstMCI CGRYCG 2 cut(s) 506, 706
BstNI CCWGG 3 cut(s) 36, 208, 1758
BstSCI CCNGG 8 cut(s) 34, 206, 575, 711, 957, 1151, 1756, 1800
BstSLI GKGCMC 3 cut(s) 214, 833, 1033
BstUI CGCG 7 cut(s) 255, 264, 708, 738, 858, 901, 903
BstV1I GCAGC 8 cut(s) 17, 314, 526, 949, 1170, 1291, 1329, 1416
BstV2I GAAGAC 1 cut(s) 1163
BstX2I RGATCY 1 cut(s) 745
BstXI CCANNNNNNTGG 1 cut(s) 1819
BstYI RGATCY 1 cut(s) 745
Bsu36I CCTNAGG 1 cut(s) 1563
BsuRI GGCC 9 cut(s) 212, 417, 443, 689, 1076, 1151, 1352, 1811, 1823
BtgI CCRYGG 5 cut(s) 253, 262, 1071, 1388, 1812
BtgZI GCGATG 1 cut(s) 1848
BtrI CACGTC 1 cut(s) 1309
BtsCI GGATG 2 cut(s) 1257, 1345
BtsI GCAGTG 1 cut(s) 1225
BtsIMutI CAGTG 3 cut(s) 669, 1225, 1247
BtuMI TCGCGA 1 cut(s) 708
Cac8I GCNNGC 3 cut(s) 343, 760, 1851
CaiI CAGNNNCTG 1 cut(s) 1849
CciI TCATGA 1 cut(s) 1621
CfoI GCGC 3 cut(s) 738, 860, 903
Cfr10I RCCGGY 3 cut(s) 720, 963, 1738
Cfr13I GGNCC 7 cut(s) 29, 38, 210, 211, 961, 1044, 1063
Cfr42I CCGCGG 2 cut(s) 256, 265
CseI GACGC 3 cut(s) 99, 247, 727
Csp6I GTAC 3 cut(s) 161, 477, 1629
CspAI ACCGGT 1 cut(s) 720
CviAII CATG 6 cut(s) 676, 1078, 1321, 1600, 1622, 1813
CviQI GTAC 3 cut(s) 161, 477, 1629
DdeI CTNAG 7 cut(s) 563, 968, 1425, 1532, 1563, 1698, 1718
DpnI GATC 7 cut(s) 487, 499, 705, 747, 855, 1196, 1524
DpnII GATC 7 cut(s) 485, 497, 703, 745, 853, 1194, 1522
DriI GACNNNNNGTC 1 cut(s) 172
EaeI YGGCCR 3 cut(s) 1074, 1809, 1821
Eam1104I CTCTTC 3 cut(s) 152, 551, 1241
Eam1105I GACNNNNNGTC 1 cut(s) 172
EarI CTCTTC 3 cut(s) 152, 551, 1241
EciI GGCGGA 3 cut(s) 97, 535, 1247
Ecl136II GAGCTC 1 cut(s) 799
Eco130I CCWWGG 2 cut(s) 1353, 1812
Eco24I GRGCYC 2 cut(s) 214, 801
Eco47I GGWCC 5 cut(s) 29, 38, 961, 1044, 1063
Eco53kI GAGCTC 1 cut(s) 799
Eco57I CTGAAG 3 cut(s) 33, 1223, 1304
Eco81I CCTNAGG 1 cut(s) 1563
Eco88I CYCGRG 3 cut(s) 389, 694, 1489
EcoICRI GAGCTC 1 cut(s) 799
EcoO109I RGGNCCY 3 cut(s) 38, 1044, 1063
EcoRI GAATTC 1 cut(s) 1207
EcoRII CCWGG 3 cut(s) 34, 206, 1756
EcoT14I CCWWGG 2 cut(s) 1353, 1812
EcoT38I GRGCYC 2 cut(s) 214, 801
ErhI CCWWGG 2 cut(s) 1353, 1812
Esp3I CGTCTC 4 cut(s) 486, 697, 745, 1631
FaeI CATG 6 cut(s) 679, 1081, 1324, 1603, 1625, 1816
FalI AAGNNNNNCTT 4 cut(s) 1277, 1309, 1538, 1570
FaqI GGGAC 4 cut(s) 102, 974, 1030, 1049
FatI CATG 6 cut(s) 675, 1077, 1320, 1599, 1621, 1812
FauI CCCGC 2 cut(s) 519, 906
FblI GTMKAC 2 cut(s) 1733, 1860
FokI GGATG 2 cut(s) 1264, 1352
FriOI GRGCYC 2 cut(s) 214, 801
FspBI CTAG 2 cut(s) 338, 410
GlaI GCGC 3 cut(s) 737, 859, 902
GsuI CTGGAG 2 cut(s) 18, 1025
HaeIII GGCC 9 cut(s) 212, 417, 443, 689, 1076, 1151, 1352, 1811, 1823
HgaI GACGC 3 cut(s) 99, 247, 727
HhaI GCGC 3 cut(s) 738, 860, 903
Hin1I GRCGYC 1 cut(s) 258
Hin1II CATG 6 cut(s) 679, 1081, 1324, 1603, 1625, 1816
Hin6I GCGC 3 cut(s) 736, 858, 901
HinP1I GCGC 3 cut(s) 736, 858, 901
HincII GTYRAC 1 cut(s) 1861
HindII GTYRAC 1 cut(s) 1861
HindIII AAGCTT 1 cut(s) 1082
HinfI GANTC 9 cut(s) 53, 353, 394, 446, 842, 905, 954, 1654, 1714
HphI GGTGA 4 cut(s) 616, 1279, 1457, 1753
Hpy166II GTNNAC 3 cut(s) 1021, 1734, 1861
Hpy8I GTNNAC 3 cut(s) 1021, 1734, 1861
Hpy99I CGWCG 2 cut(s) 616, 926
HpyCH4III ACNGT 1 cut(s) 476
HpyCH4IV ACGT 3 cut(s) 479, 1097, 1308
HpyCH4V TGCA 6 cut(s) 246, 345, 884, 1145, 1432, 1486
HpyF3I CTNAG 7 cut(s) 563, 968, 1425, 1532, 1563, 1698, 1718
HpySE526I ACGT 3 cut(s) 479, 1097, 1308
Hsp92I GRCGYC 1 cut(s) 258
Hsp92II CATG 6 cut(s) 679, 1081, 1324, 1603, 1625, 1816
HspAI GCGC 3 cut(s) 736, 858, 901
KflI GGGWCCC 1 cut(s) 1063
Kpn2I TCCGGA 1 cut(s) 913
KspI CCGCGG 2 cut(s) 256, 265
Kzo9I GATC 7 cut(s) 485, 497, 703, 745, 853, 1194, 1522
LmnI GCTCC 5 cut(s) 13, 318, 583, 934, 1234
Lsp1109I GCAGC 8 cut(s) 17, 314, 526, 949, 1170, 1291, 1329, 1416
LweI GCATC 1 cut(s) 1132
MaeI CTAG 2 cut(s) 338, 410
MaeII ACGT 3 cut(s) 479, 1097, 1308
MaeIII GTNAC 5 cut(s) 566, 1008, 1304, 1595, 1741
MalI GATC 7 cut(s) 487, 499, 705, 747, 855, 1196, 1524
MboI GATC 7 cut(s) 485, 497, 703, 745, 853, 1194, 1522
MflI RGATCY 1 cut(s) 745
MhlI GDGCHC 5 cut(s) 214, 801, 833, 1033, 1180
MlsI TGGCCA 3 cut(s) 1076, 1811, 1823
MluCI AATT 5 cut(s) 365, 665, 1207, 1373, 1789
MluNI TGGCCA 3 cut(s) 1076, 1811, 1823
MlyI GAGTC 6 cut(s) 47, 347, 455, 836, 914, 963
MmeI TCCRAC 2 cut(s) 303, 795
Mox20I TGGCCA 3 cut(s) 1076, 1811, 1823
MroI TCCGGA 1 cut(s) 913
MroXI GAANNNNTTC 2 cut(s) 195, 893
MscI TGGCCA 3 cut(s) 1076, 1811, 1823
MseI TTAA 4 cut(s) 534, 992, 1104, 1376
MslI CAYNNNNRTG 2 cut(s) 674, 1036
Msp20I TGGCCA 3 cut(s) 1076, 1811, 1823
MspA1I CMGCKG 4 cut(s) 255, 264, 517, 1282
MspR9I CCNGG 8 cut(s) 36, 208, 577, 713, 959, 1153, 1758, 1802
Mva1269I GAATGC 1 cut(s) 305
MvaI CCWGG 3 cut(s) 36, 208, 1758
MvnI CGCG 7 cut(s) 255, 264, 708, 738, 858, 901, 903
NciI CCSGG 5 cut(s) 577, 713, 959, 1153, 1802
NcoI CCATGG 1 cut(s) 1812
NdeII GATC 7 cut(s) 485, 497, 703, 745, 853, 1194, 1522
NlaIII CATG 6 cut(s) 679, 1081, 1324, 1603, 1625, 1816
NmeAIII GCCGAG 2 cut(s) 469, 612
NmuCI GTSAC 3 cut(s) 1304, 1595, 1741
NruI TCGCGA 1 cut(s) 708
NspV TTCGAA 1 cut(s) 1127
PaeR7I CTCGAG 1 cut(s) 694
PagI TCATGA 1 cut(s) 1621
PcsI WCGNNNNNNNCGW 1 cut(s) 842
PctI GAATGC 1 cut(s) 305
PdmI GAANNNNTTC 2 cut(s) 195, 893
PfeI GAWTC 3 cut(s) 394, 1654, 1714
PflMI CCANNNNNTGG 1 cut(s) 207
PfoI TCCNGGA 2 cut(s) 34, 957
PinAI ACCGGT 1 cut(s) 720
Ple19I CGATCG 1 cut(s) 706
PleI GAGTC 6 cut(s) 47, 347, 454, 836, 913, 962
PpsI GAGTC 6 cut(s) 47, 347, 454, 836, 913, 962
PpuMI RGGWCCY 3 cut(s) 38, 1044, 1063
Psp124BI GAGCTC 1 cut(s) 801
Psp1406I AACGTT 1 cut(s) 1097
Psp5II RGGWCCY 3 cut(s) 38, 1044, 1063
Psp6I CCWGG 3 cut(s) 34, 206, 1756
PspGI CCWGG 3 cut(s) 34, 206, 1756
PspOMI GGGCCC 1 cut(s) 210
PspPI GGNCC 7 cut(s) 29, 38, 210, 211, 961, 1044, 1063
PspPPI RGGWCCY 3 cut(s) 38, 1044, 1063
PstNI CAGNNNCTG 1 cut(s) 1849
PsuI RGATCY 1 cut(s) 745
PvuI CGATCG 1 cut(s) 706
PvuII CAGCTG 1 cut(s) 1282
RruI TCGCGA 1 cut(s) 708
RsaI GTAC 3 cut(s) 162, 478, 1630
RsaNI GTAC 3 cut(s) 161, 477, 1629
RseI CAYNNNNRTG 2 cut(s) 674, 1036
SacI GAGCTC 1 cut(s) 801
SacII CCGCGG 2 cut(s) 256, 265
SalI GTCGAC 1 cut(s) 1859
SaqAI TTAA 4 cut(s) 534, 992, 1104, 1376
Sau3AI GATC 7 cut(s) 485, 497, 703, 745, 853, 1194, 1522
Sau96I GGNCC 7 cut(s) 29, 38, 210, 211, 961, 1044, 1063
ScaI AGTACT 1 cut(s) 1630
SchI GAGTC 6 cut(s) 47, 347, 455, 836, 914, 963
ScrFI CCNGG 8 cut(s) 36, 208, 577, 713, 959, 1153, 1758, 1802
SduI GDGCHC 5 cut(s) 214, 801, 833, 1033, 1180
SfaNI GCATC 1 cut(s) 1132
Sfr274I CTCGAG 1 cut(s) 694
Sfr303I CCGCGG 2 cut(s) 256, 265
SfuI TTCGAA 1 cut(s) 1127
SgrAI CRCCGGYG 1 cut(s) 1738
SgrBI CCGCGG 2 cut(s) 256, 265
SinI GGWCC 5 cut(s) 29, 38, 961, 1044, 1063
SlaI CTCGAG 1 cut(s) 694
SmiMI CAYNNNNRTG 2 cut(s) 674, 1036
SmlI CTYRAG 3 cut(s) 233, 454, 694
SmoI CTYRAG 3 cut(s) 233, 454, 694
Sse9I AATT 5 cut(s) 365, 665, 1207, 1373, 1789
SspMI CTAG 2 cut(s) 338, 410
SstI GAGCTC 1 cut(s) 801
StyD4I CCNGG 8 cut(s) 34, 206, 575, 711, 957, 1151, 1756, 1800
StyI CCWWGG 2 cut(s) 1353, 1812
TaaI ACNGT 1 cut(s) 476
TaiI ACGT 3 cut(s) 482, 1100, 1311
TaqII GACCGA 1 cut(s) 492
TasI AATT 5 cut(s) 365, 665, 1207, 1373, 1789
TatI WGTACW 1 cut(s) 1628
TauI GCSGC 7 cut(s) 258, 267, 520, 758, 821, 1172, 1189
TfiI GAWTC 3 cut(s) 394, 1654, 1714
Tru1I TTAA 4 cut(s) 534, 992, 1104, 1376
Tru9I TTAA 4 cut(s) 534, 992, 1104, 1376
TscAI CASTG 3 cut(s) 676, 1225, 1247
TseFI GTSAC 3 cut(s) 1304, 1595, 1741
TseI GCWGC 8 cut(s) 5, 302, 514, 937, 1183, 1279, 1317, 1429
Tsp45I GTSAC 3 cut(s) 1304, 1595, 1741
TspDTI ATGAA 1 cut(s) 1094
TspGWI ACGGA 4 cut(s) 629, 1060, 1655, 1760
TspRI CASTG 3 cut(s) 676, 1225, 1247
Van91I CCANNNNNTGG 1 cut(s) 207
VpaK11BI GGWCC 5 cut(s) 29, 38, 961, 1044, 1063
XapI RAATTY 3 cut(s) 665, 1207, 1789
XbaI TCTAGA 1 cut(s) 409
XhoI CTCGAG 1 cut(s) 694
XmiI GTMKAC 2 cut(s) 1733, 1860
XmnI GAANNNNTTC 2 cut(s) 195, 893
XspI CTAG 2 cut(s) 338, 410
ZrmI AGTACT 1 cut(s) 1630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.