Prupe.5G159300_v2.0.a1

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000255
Physical Location & Seq
Reverse (-)
14096998 .. 14098629
1632 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G159300.1

Sequence Viewer

Length: 1413 bp
ATGGCTCCTTATACAACTCTTGCTGGTCCTCCAGAGCTGATCAGAGACCGTTTCGTGGTTGCCAATAATTTTGAGAATGAGGCAGCCGCAGCCGCAGCCACGACAACAATGAGACCCCCAAATCTCTTCCCAATTTATGAGATTCTGTACCAGCTTCTAGAAGACGGAGACCAACACCGGAGGACGGAGCCCCTTGCGAAAATGATCAACAAGGCTGTTGAGAGGTACGAGCATGACCCAGACTATCACTTGCTGTACGACCAGGTTATGGATCTTTTTGTCGAGCACTTGAAGTCTGATATTCAAATATTGAAGCGAAAATGGAAGCAATCTGACGATATTAATGATGATGCCCAAGTATCCGATGCTGCAAACTCTTGCCTTTCCAGAAACTCCCAAGACGTCCACATCATACGCTCCGTTTTGTTGTGGGAAACCATTGCGAGGAAGGTTTTCCCGCGAGAATCGTACCCGGAATACCAACATCTTGAGGAGGCTGATTACATTAGCAAAATCCGAGACCGGCTCAGGAAGGAGGTTTTGGTGCCCTTGGACAAGGCCGAGCGTTCTCAATGCAGCAACCGTTCACGAAAAGCTGGTGCGGATGAGACCTATTTGAAGGAGGTGAAAGCAGACAAGTGCAAGATTGAGGCAGATGCTTTGCTTCCACATAAGATCTTAGCGTTTGTTGATGACCCCAATCTCCAGAAGGTGGCTGAGCTTCAGTGGAAGACAATGGTGGAGGACATGAAAAGGCAAGGTAAAAATGGAAAGCAGACACTCAGCAACTGCTTGGCTGTATATGACGACAACTCTGAATTCCATTCTAGGCACGGGATCCGGATGGACGCTTCGGTGGCTTTGACACTTTTGATGTCTGAACTGAATGAAGAGCCATGGAAAGGAAAGGTGATCAATTTTAGTGAGTCGCCTCAGCTACACTTTATACAAGGCAATAATCTTATGAACAAGTGCGAGTTTGTCAGCAACATGCACAAGGACCAGAACCTTGATTTTCAGAAGGTGTTTGATTTGATTTTGGAAGTGGCTGTGAATGGGAATTTGAAGCCAGAGCAGATGATCAACAAGGTATTTGTGCTCACAGAATACAAACACTTTGAAGATGTTTCCAACAACAGCTGGAAGACTGATTATGAGGCAATACAGAGCAAGTTTAAGGAGAAAGGGTATGGGACTGCGGTGCCACACATAGTGTTTTGGAGGTTCGAAAGTTTGGACCATGAGTCTAGGCCGGTGATGCCTTCCACAGAACCAGGGGTGACGCTTTTAAGTGGCTTGTCCAGCAATTTGATCAAGTTGTTCTTGGAGAATGGTGGAGAAATTGGCCCCGACCAATTCATGGAATCAGCCATCTCTAGTAAAAAGTTTCAGAAGCTGGTTGTAGTAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

471

Amino Acids

54.06

Weight (kDa)

5.56

Isoelectric Point (pI)

43.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 405
AccB1I GGYRCC 2 cut(s) 544, 1201
AccB7I CCANNNNNTGG 3 cut(s) 268, 712, 1360
AccI GTMKAC 1 cut(s) 1407
AccII CGCG 1 cut(s) 460
AccIII TCCGGA 1 cut(s) 840
AciI CCGC 5 cut(s) 87, 93, 458, 602, 1199
AclWI GGATC 3 cut(s) 279, 832, 845
AcsI RAATTY 2 cut(s) 818, 1060
AcuI CTGAAG 1 cut(s) 707
AcyI GRCGYC 1 cut(s) 402
AdeI CACNNNGTG 1 cut(s) 1213
AfaI GTAC 4 cut(s) 149, 227, 257, 470
AfiI CCNNNNNNNGG 7 cut(s) 55, 184, 268, 444, 712, 902, 1360
AgsI TTSAA 6 cut(s) 292, 305, 313, 619, 1066, 1121
AhdI GACNNNNNGTC 1 cut(s) 1243
AjnI CCWGG 2 cut(s) 261, 1273
AjuI GAANNNNNNNTTGG 2 cut(s) 524, 556
AluBI AGCT 7 cut(s) 37, 154, 596, 721, 937, 1140, 1396
AluI AGCT 7 cut(s) 37, 154, 596, 721, 937, 1140, 1396
Alw21I GWGCWC 2 cut(s) 288, 1101
Alw26I GTCTC 5 cut(s) 39, 106, 162, 513, 602
AlwI GGATC 3 cut(s) 279, 832, 845
AlwNI CAGNNNCTG 2 cut(s) 789, 1396
Aor13HI TCCGGA 1 cut(s) 840
AoxI GGCC 3 cut(s) 558, 1250, 1345
ApeKI GCWGC 5 cut(s) 83, 89, 95, 368, 576
ApoI RAATTY 2 cut(s) 818, 1060
AseI ATTAAT 1 cut(s) 342
Asp700I GAANNNNTTC 1 cut(s) 452
AspS9I GGNCC 4 cut(s) 26, 1000, 1237, 1346
AsuC2I CCSGG 1 cut(s) 473
AsuHPI GGTGA 4 cut(s) 637, 922, 1267, 1291
AsuII TTCGAA 1 cut(s) 1227
AvaII GGWCC 3 cut(s) 26, 1000, 1237
BaeGI GKGCMC 1 cut(s) 549
BamHI GGATCC 1 cut(s) 837
BanI GGYRCC 2 cut(s) 544, 1201
BanII GRGCYC 1 cut(s) 192
BbsI GAAGAC 3 cut(s) 168, 737, 1151
Bbv12I GWGCWC 2 cut(s) 288, 1101
BbvCI CCTCAGC 1 cut(s) 933
BbvI GCAGC 5 cut(s) 95, 101, 107, 355, 588
BccI CCATC 2 cut(s) 838, 1379
BciT130I CCWGG 2 cut(s) 263, 1275
BciVI GTATCC 1 cut(s) 370
BclI TGATCA 5 cut(s) 39, 204, 912, 1080, 1311
BcnI CCSGG 1 cut(s) 473
BcoDI GTCTC 5 cut(s) 39, 106, 162, 513, 602
BfaI CTAG 4 cut(s) 158, 828, 1248, 1377
BfuI GTATCC 1 cut(s) 370
BglII AGATCT 1 cut(s) 675
BisI GCNGC 7 cut(s) 84, 87, 90, 93, 96, 369, 577
BlpI GCTNAGC 1 cut(s) 717
BlsI GCNGC 7 cut(s) 85, 88, 91, 94, 97, 370, 578
Bme1390I CCNGG 3 cut(s) 263, 473, 1275
Bme18I GGWCC 3 cut(s) 26, 1000, 1237
BmeRI GACNNNNNGTC 1 cut(s) 1243
BmgT120I GGNCC 4 cut(s) 26, 1000, 1237, 1346
BmiI GGNNCC 6 cut(s) 6, 189, 546, 839, 1203, 1348
BmrFI CCNGG 3 cut(s) 263, 473, 1275
BmsI GCATC 4 cut(s) 340, 355, 646, 1248
BpiI GAAGAC 3 cut(s) 168, 737, 1151
BplI GAGNNNNNCTC 2 cut(s) 510, 542
BpmI CTGGAG 2 cut(s) 15, 689
Bpu10I CCTNAGC 2 cut(s) 527, 933
Bpu1102I GCTNAGC 1 cut(s) 717
Bpu14I TTCGAA 1 cut(s) 1227
BpuEI CTTGAG 1 cut(s) 509
BpuMI CCSGG 1 cut(s) 473
BsaHI GRCGYC 1 cut(s) 402
BsaI GGTCTC 5 cut(s) 39, 106, 162, 513, 602
BsaJI CCNNGG 3 cut(s) 549, 896, 1274
BsaWI WCCGGW 2 cut(s) 177, 840
BsaXI ACNNNNNCTCC 2 cut(s) 1172, 1202
Bsc4I CCNNNNNNNGG 7 cut(s) 55, 184, 268, 444, 712, 902, 1360
Bse118I RCCGGY 2 cut(s) 522, 1252
Bse3DI GCAATG 1 cut(s) 438
BseAI TCCGGA 1 cut(s) 840
BseBI CCWGG 2 cut(s) 263, 1275
BseDI CCNNGG 3 cut(s) 549, 896, 1274
BseGI GGATG 2 cut(s) 610, 849
BseLI CCNNNNNNNGG 7 cut(s) 55, 184, 268, 444, 712, 902, 1360
BseMI GCAATG 1 cut(s) 438
BseMII CTCAG 4 cut(s) 541, 708, 796, 947
BseRI GAGGAG 1 cut(s) 506
BseSI GKGCMC 1 cut(s) 549
BseXI GCAGC 5 cut(s) 95, 101, 107, 355, 588
Bsh1236I CGCG 1 cut(s) 460
BshFI GGCC 3 cut(s) 560, 1252, 1347
BshNI GGYRCC 2 cut(s) 544, 1201
BsiHKAI GWGCWC 2 cut(s) 288, 1101
BsiSI CCGG 5 cut(s) 178, 473, 523, 841, 1253
BslFI GGGAC 1 cut(s) 1207
BslI CCNNNNNNNGG 7 cut(s) 55, 184, 268, 444, 712, 902, 1360
BsmAI GTCTC 5 cut(s) 39, 106, 162, 513, 602
BsmFI GGGAC 1 cut(s) 1207
BsnI GGCC 3 cut(s) 560, 1252, 1347
Bso31I GGTCTC 5 cut(s) 39, 106, 162, 513, 602
Bsp119I TTCGAA 1 cut(s) 1227
Bsp1286I GDGCHC 4 cut(s) 192, 288, 549, 1101
Bsp13I TCCGGA 1 cut(s) 840
Bsp143I GATC 8 cut(s) 39, 204, 271, 675, 837, 912, 1080, 1311
Bsp1720I GCTNAGC 1 cut(s) 717
Bsp19I CCATGG 1 cut(s) 896
BspACI CCGC 5 cut(s) 87, 93, 458, 602, 1199
BspANI GGCC 3 cut(s) 560, 1252, 1347
BspCNI CTCAG 4 cut(s) 540, 709, 795, 946
BspEI TCCGGA 1 cut(s) 840
BspFNI CGCG 1 cut(s) 460
BspLI GGNNCC 6 cut(s) 6, 189, 546, 839, 1203, 1348
BspPI GGATC 3 cut(s) 279, 832, 845
BspQI GCTCTTC 1 cut(s) 885
BspT104I TTCGAA 1 cut(s) 1227
BspT107I GGYRCC 2 cut(s) 544, 1201
BspTNI GGTCTC 5 cut(s) 39, 106, 162, 513, 602
BsrDI GCAATG 1 cut(s) 438
BsrFI RCCGGY 2 cut(s) 522, 1252
BssAI RCCGGY 2 cut(s) 522, 1252
BssECI CCNNGG 3 cut(s) 549, 896, 1274
BssMI GATC 8 cut(s) 39, 204, 271, 675, 837, 912, 1080, 1311
BssNI GRCGYC 1 cut(s) 402
BssT1I CCWWGG 2 cut(s) 549, 896
Bst2UI CCWGG 2 cut(s) 263, 1275
Bst4CI ACNGT 2 cut(s) 50, 584
Bst6I CTCTTC 2 cut(s) 131, 885
BstACI GRCGYC 1 cut(s) 402
BstBI TTCGAA 1 cut(s) 1227
BstDEI CTNAG 5 cut(s) 527, 679, 717, 782, 933
BstDSI CCRYGG 1 cut(s) 896
BstF5I GGATG 2 cut(s) 610, 849
BstFNI CGCG 1 cut(s) 460
BstKTI GATC 8 cut(s) 42, 207, 274, 678, 840, 915, 1083, 1314
BstMAI GTCTC 5 cut(s) 39, 106, 162, 513, 602
BstMBI GATC 8 cut(s) 39, 204, 271, 675, 837, 912, 1080, 1311
BstMWI GCNNNNNNNGC 6 cut(s) 89, 92, 95, 857, 1258, 1302
BstNI CCWGG 2 cut(s) 263, 1275
BstNSI RCATGY 1 cut(s) 994
BstSCI CCNGG 3 cut(s) 261, 471, 1273
BstSLI GKGCMC 1 cut(s) 549
BstUI CGCG 1 cut(s) 460
BstV1I GCAGC 5 cut(s) 95, 101, 107, 355, 588
BstV2I GAAGAC 3 cut(s) 168, 737, 1151
BstX2I RGATCY 3 cut(s) 271, 675, 837
BstYI RGATCY 3 cut(s) 271, 675, 837
BsuI GTATCC 1 cut(s) 370
BsuRI GGCC 3 cut(s) 560, 1252, 1347
BtgI CCRYGG 1 cut(s) 896
BtsCI GGATG 2 cut(s) 610, 849
BtsIMutI CAGTG 1 cut(s) 731
CaiI CAGNNNCTG 2 cut(s) 789, 1396
Cfr10I RCCGGY 2 cut(s) 522, 1252
Cfr13I GGNCC 4 cut(s) 26, 1000, 1237, 1346
CseI GACGC 2 cut(s) 857, 1291
CsiI ACCWGGT 1 cut(s) 261
Csp6I GTAC 4 cut(s) 148, 226, 256, 469
CviAII CATG 6 cut(s) 233, 748, 897, 991, 1241, 1360
CviQI GTAC 4 cut(s) 148, 226, 256, 469
DdeI CTNAG 5 cut(s) 527, 679, 717, 782, 933
DpnI GATC 8 cut(s) 41, 206, 273, 677, 839, 914, 1082, 1313
DpnII GATC 8 cut(s) 39, 204, 271, 675, 837, 912, 1080, 1311
DraIII CACNNNGTG 1 cut(s) 1213
DriI GACNNNNNGTC 1 cut(s) 1243
Eam1104I CTCTTC 2 cut(s) 131, 885
Eam1105I GACNNNNNGTC 1 cut(s) 1243
EarI CTCTTC 2 cut(s) 131, 885
Eco130I CCWWGG 2 cut(s) 549, 896
Eco24I GRGCYC 1 cut(s) 192
Eco31I GGTCTC 5 cut(s) 39, 106, 162, 513, 602
Eco47I GGWCC 3 cut(s) 26, 1000, 1237
Eco57I CTGAAG 1 cut(s) 707
EcoRI GAATTC 1 cut(s) 818
EcoRII CCWGG 2 cut(s) 261, 1273
EcoT14I CCWWGG 2 cut(s) 549, 896
EcoT38I GRGCYC 1 cut(s) 192
ErhI CCWWGG 2 cut(s) 549, 896
FaeI CATG 6 cut(s) 236, 751, 900, 994, 1244, 1363
FalI AAGNNNNNCTT 2 cut(s) 1307, 1339
FaqI GGGAC 1 cut(s) 1207
FatI CATG 6 cut(s) 232, 747, 896, 990, 1240, 1359
FauI CCCGC 1 cut(s) 465
FbaI TGATCA 5 cut(s) 39, 204, 912, 1080, 1311
FblI GTMKAC 1 cut(s) 1407
Fnu4HI GCNGC 7 cut(s) 84, 87, 90, 93, 96, 369, 577
FokI GGATG 2 cut(s) 617, 856
FriOI GRGCYC 1 cut(s) 192
Fsp4HI GCNGC 7 cut(s) 84, 87, 90, 93, 96, 369, 577
FspBI CTAG 4 cut(s) 158, 828, 1248, 1377
GluI GCNGC 7 cut(s) 84, 87, 90, 93, 96, 369, 577
GsuI CTGGAG 2 cut(s) 15, 689
HaeIII GGCC 3 cut(s) 560, 1252, 1347
HapII CCGG 5 cut(s) 178, 473, 523, 841, 1253
HgaI GACGC 2 cut(s) 857, 1291
Hin1I GRCGYC 1 cut(s) 402
Hin1II CATG 6 cut(s) 236, 751, 900, 994, 1244, 1363
HinfI GANTC 5 cut(s) 142, 464, 926, 1244, 1364
HpaII CCGG 5 cut(s) 178, 473, 523, 841, 1253
HphI GGTGA 4 cut(s) 637, 922, 1267, 1291
Hpy166II GTNNAC 3 cut(s) 406, 587, 1408
Hpy188I TCNGA 9 cut(s) 44, 298, 334, 364, 518, 817, 880, 1020, 1392
Hpy188III TCNNGA 8 cut(s) 32, 158, 387, 488, 529, 588, 706, 841
Hpy8I GTNNAC 3 cut(s) 406, 587, 1408
HpyAV CCTTC 6 cut(s) 442, 526, 613, 703, 1015, 1272
HpyCH4III ACNGT 2 cut(s) 50, 584
HpyCH4IV ACGT 1 cut(s) 402
HpyCH4V TGCA 4 cut(s) 371, 576, 642, 994
HpyF10VI GCNNNNNNNGC 6 cut(s) 89, 92, 95, 857, 1258, 1302
HpyF3I CTNAG 5 cut(s) 527, 679, 717, 782, 933
HpySE526I ACGT 1 cut(s) 402
Hsp92I GRCGYC 1 cut(s) 402
Hsp92II CATG 6 cut(s) 236, 751, 900, 994, 1244, 1363
Kpn2I TCCGGA 1 cut(s) 840
Ksp22I TGATCA 5 cut(s) 39, 204, 912, 1080, 1311
Kzo9I GATC 8 cut(s) 39, 204, 271, 675, 837, 912, 1080, 1311
LguI GCTCTTC 1 cut(s) 885
LmnI GCTCC 3 cut(s) 10, 187, 422
Lsp1109I GCAGC 5 cut(s) 95, 101, 107, 355, 588
LweI GCATC 4 cut(s) 340, 355, 646, 1248
MabI ACCWGGT 1 cut(s) 261
MaeI CTAG 4 cut(s) 158, 828, 1248, 1377
MaeII ACGT 1 cut(s) 402
MaeIII GTNAC 1 cut(s) 1279
MalI GATC 8 cut(s) 41, 206, 273, 677, 839, 914, 1082, 1313
MboI GATC 8 cut(s) 39, 204, 271, 675, 837, 912, 1080, 1311
MboII GAAGA 6 cut(s) 118, 173, 742, 902, 1133, 1156
MflI RGATCY 3 cut(s) 271, 675, 837
MhlI GDGCHC 4 cut(s) 192, 288, 549, 1101
MluCI AATT 8 cut(s) 67, 132, 818, 916, 1060, 1306, 1341, 1355
MlyI GAGTC 2 cut(s) 935, 1253
MmeI TCCRAC 1 cut(s) 1155
MroI TCCGGA 1 cut(s) 840
MroXI GAANNNNTTC 1 cut(s) 452
MseI TTAA 3 cut(s) 342, 1176, 1289
MspA1I CMGCKG 1 cut(s) 1140
MspI CCGG 5 cut(s) 178, 473, 523, 841, 1253
MspR9I CCNGG 3 cut(s) 263, 473, 1275
MvaI CCWGG 2 cut(s) 263, 1275
MvnI CGCG 1 cut(s) 460
MwoI GCNNNNNNNGC 6 cut(s) 89, 92, 95, 857, 1258, 1302
NciI CCSGG 1 cut(s) 473
NcoI CCATGG 1 cut(s) 896
NdeII GATC 8 cut(s) 39, 204, 271, 675, 837, 912, 1080, 1311
NlaIII CATG 6 cut(s) 236, 751, 900, 994, 1244, 1363
NlaIV GGNNCC 6 cut(s) 6, 189, 546, 839, 1203, 1348
NmeAIII GCCGAG 1 cut(s) 586
NmuCI GTSAC 1 cut(s) 1279
NspI RCATGY 1 cut(s) 994
NspV TTCGAA 1 cut(s) 1227
PciSI GCTCTTC 1 cut(s) 885
PdmI GAANNNNTTC 1 cut(s) 452
PfeI GAWTC 3 cut(s) 142, 464, 1364
PflMI CCANNNNNTGG 3 cut(s) 268, 712, 1360
PkrI GCNGC 7 cut(s) 85, 88, 91, 94, 97, 370, 578
PleI GAGTC 2 cut(s) 934, 1252
PpsI GAGTC 2 cut(s) 934, 1252
PshBI ATTAAT 1 cut(s) 342
Psp6I CCWGG 2 cut(s) 261, 1273
PspGI CCWGG 2 cut(s) 261, 1273
PspN4I GGNNCC 6 cut(s) 6, 189, 546, 839, 1203, 1348
PspPI GGNCC 4 cut(s) 26, 1000, 1237, 1346
PstNI CAGNNNCTG 2 cut(s) 789, 1396
PsuI RGATCY 3 cut(s) 271, 675, 837
PvuII CAGCTG 1 cut(s) 1140
RsaI GTAC 4 cut(s) 149, 227, 257, 470
RsaNI GTAC 4 cut(s) 148, 226, 256, 469
SapI GCTCTTC 1 cut(s) 885
SaqAI TTAA 3 cut(s) 342, 1176, 1289
SatI GCNGC 7 cut(s) 84, 87, 90, 93, 96, 369, 577
Sau3AI GATC 8 cut(s) 39, 204, 271, 675, 837, 912, 1080, 1311
Sau96I GGNCC 4 cut(s) 26, 1000, 1237, 1346
SchI GAGTC 2 cut(s) 935, 1253
ScrFI CCNGG 3 cut(s) 263, 473, 1275
SduI GDGCHC 4 cut(s) 192, 288, 549, 1101
SexAI ACCWGGT 1 cut(s) 261
SfaNI GCATC 4 cut(s) 340, 355, 646, 1248
SfuI TTCGAA 1 cut(s) 1227
SinI GGWCC 3 cut(s) 26, 1000, 1237
SmlI CTYRAG 1 cut(s) 488
SmoI CTYRAG 1 cut(s) 488
Sse9I AATT 8 cut(s) 67, 132, 818, 916, 1060, 1306, 1341, 1355
SsiI CCGC 5 cut(s) 87, 93, 458, 602, 1199
SspI AATATT 1 cut(s) 309
SspMI CTAG 4 cut(s) 158, 828, 1248, 1377
StyD4I CCNGG 3 cut(s) 261, 471, 1273
StyI CCWWGG 2 cut(s) 549, 896
TaaI ACNGT 2 cut(s) 50, 584
TaiI ACGT 1 cut(s) 405
TaqI TCGA 2 cut(s) 282, 1227
TasI AATT 8 cut(s) 67, 132, 818, 916, 1060, 1306, 1341, 1355
TauI GCSGC 2 cut(s) 89, 95
TfiI GAWTC 3 cut(s) 142, 464, 1364
Tru1I TTAA 3 cut(s) 342, 1176, 1289
Tru9I TTAA 3 cut(s) 342, 1176, 1289
TscAI CASTG 1 cut(s) 731
TseFI GTSAC 1 cut(s) 1279
TseI GCWGC 5 cut(s) 83, 89, 95, 368, 576
Tsp45I GTSAC 1 cut(s) 1279
TspDTI ATGAA 4 cut(s) 764, 903, 980, 1348
TspGWI ACGGA 3 cut(s) 180, 200, 409
TspRI CASTG 1 cut(s) 731
Van91I CCANNNNNTGG 3 cut(s) 268, 712, 1360
VpaK11BI GGWCC 3 cut(s) 26, 1000, 1237
VspI ATTAAT 1 cut(s) 342
XapI RAATTY 2 cut(s) 818, 1060
XbaI TCTAGA 1 cut(s) 157
XceI RCATGY 1 cut(s) 994
XmiI GTMKAC 1 cut(s) 1407
XmnI GAANNNNTTC 1 cut(s) 452
XspI CTAG 4 cut(s) 158, 828, 1248, 1377
ZraI GACGTC 1 cut(s) 403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.