Rh7BG070300

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000255
Physical Location & Seq
Reverse (-)
4741502 .. 4743756
2255 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG070300.1

Sequence Viewer

Length: 2031 bp
ATGGCTCTTCTTCTCGGTCCTCCATCCCTCAGGCAATCCCCAACCCCGGCGGCCCAACAACCACAGGCCCAAGCCCCTTCCGGCGACCCATTCATCGACCTCATGGTCGCCGATTACAACAACCTGGCCCAGCCTCCGATCACCAGGCCCCAAATGGGCTTCACCGAGAACGGCTCAGCCACATTCGTCACCACCGGCGATCCTTGCCTCGATCTCTTCTTCCACGTCGTCCCCAACACTCCGGCGTCGTATCTGAACCAGCAGCTCCCTCTGGCCTGGGCCCACAACGCCCTCACCACCCTCAAGCTCATCTGCAACCTCCGCGGGGTACGTGGCACCGGCAAGTCTGACAAAGAAGGATTCTACACGGCGGCGTTTTGGCTCCACAAGAACCACCCCAAAACCCTAGCCTGCAACGTCGCGTCCCTCGCCGACTTCGGGTATTTCAAGGACCTGCCGGAGATTCTGTACCGCCTTCTAGAAGGTGAGGATGTGAGGAAGACGCAGAAGTCCGAGTGGCTGCAGAGGAAGTCCGGCAGGGGTAGGGTTCGGACGGCGGCGGTTCCGTTCTTCAGAGGAGGTAGCGGCAGACGCGGCGGCGGTGGTGCGAAAAAGAGAACCAAGAGCGGTGGCCGGAGAGGAAACAACAGCCGTGTGGCTAGGGAGGTGAGGGTGCTGAACTCAATGGAGAGGGCAAAATCGGAAAAGGAAAAGGCCTCTGCTTTGAGGAAGGAGAAGTTCGCAGCCATGGCCAAGAAGGCTGTTGAGAGGTACCAGCGTGACCCGGACTACAGATTCTTGCACGAACGGGTTTCGGATCTTTTCGCAGAGTGCTTGAAATCGGATATGGAGAATTTGAAGTCCAATCAGTACAAGAAGATTAGTCTTGCGGCGAAATGGTGTCCTTCTCTGGACTCGTCTTTTGATCGTGCTACTCTGCTCTGTGAGAGCATTGCCAGGAAGGTTTTCGCAAGAGAATCGCATCCGGAATATGAAGGAATTGAGGATGCACATTATGCTTATAGAGTCCGAGACCGGCTGAGGAAGGATGTGTTGGTGCCATTGAGGATAGTGTTGGAGTTGCCGGAGGTTTATATGGGTGCCAATCTGTGGGGTGCCATTCCTTACAACAGAGTGGCCTCTGTGGCGATGAAGCTTTACAAGGAGAAGTTCTTGAAGCATGATGAGGAGAGGTTTAAGAAGTATTTGGAGGATGTCAAGGCCGGGAAGTCTACTATTGCGGCCGGTGCTCTGCTTCCGCATGAGATCATAGCCTCTCTGAATGATGATGATGGGGATGGAGGGCAGGTGGCCGAGCTTCAGTGGAAGAGAGTGGTGGATGACTTGTTGAAGGAGGGCAAGATGAAGAACTGCTTGGCTGTGTGTGATGTGTCCGGAAGCATGAATGGGACTCCTATGGATGTGTGTGTTGCTTTGGGGATGTTGGTGGCTGAGTTGAATGAGGAGCCATGGAAAGGGAAGGTGATCACATTCAGTGCCAATCCTCAGCTTCACTTGATACAAGGCAATGATCTAAGCTCCAAGTCTGAGTTTGTGAAGCGGATGGACTGGGGAGGCAACACTGATTTTCAGAAGGTGTTTGATTTGATCCTCCAAGTGGCTGTGAAGGGGAATCTGAAGCCGGAGCAAATGATTAAGAGGGTGATTGTTTTCAGTGACATGGAATTTGATCAGGCTTCGGGTTATGGTTATGGAGGGTATGGATTTGGATATGGGCGGTTCGGAAGTAATGATGTTCCAAGGGGATGGGAGACTGATTATGAGGTGATTCAGAGGAAGTACAGGGAGAAAGGGTATGGTGATGCGGTGCCACAGATAGTGTTTTGGAATCTGAGGGACTCGAAGGCTACCCCGGTGCCTGGGACTCAACCAGGAGTGGCGTTACTGAGTGGCTTCTCCAAGAATTTGCTCAAGCTGTTCTTGGATAATGATGGGGAGATTCGCCCTGACACAACCATGGAAGCAGCAATCTCGGGTCCAGAGTATCAGAAGCTGGTTGTGCTGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

676

Amino Acids

75.54

Weight (kDa)

9.03

Isoelectric Point (pI)

31.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 55 - 455 1.4e-138 Domain of unknown function (DUF2828)
DUF7788 PF25043 457 - 655 1.7e-77 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000255)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24780 AT5G13210 AT5G43390 AT5G43400
fragaria_vesca FvH4_4g23010 FvH4_5g12462 FvH4_5g12490 FvH4_5g12491 FvH4_5g20030 FvH4_5g20031 FvH4_5g21510 FvH4_6g30070
malus_domestica MD00G1095100.v1.1 MD05G1186800.v1.1 MD05G1259500.v1.1 MD05G1260200.v1.1 MD06G1159400.v1.1 MD06G1159500.v1.1 MD06G1162500.v1.1 MD06G1164600.v1.1 MD06G1187800.v1.1 MD06G1212600.v1.1 MD06G1212700.v1.1 MD13G1126800.v1.1 MD14G1168300.v1.1 MD14G1206600.v1.1 MD14G1223900.v1.1 MD14G1230800.v1.1 MD15G1240300.v1.1 MD15G1416800.v1.1 MD16G1127300.v1.1
prunus_persica Prupe.1G218700_v2.0.a1 Prupe.4G045100_v2.0.a1 Prupe.5G159300_v2.0.a1 Prupe.5G172200_v2.0.a1 Prupe.5G172300_v2.0.a1 Prupe.5G173200_v2.0.a1 Prupe.5G173300_v2.0.a1 Prupe.5G173400_v2.0.a1 Prupe.5G219000_v2.0.a1 Prupe.5G219100_v2.0.a1 Prupe.5G219200_v2.0.a1
pyrus_communis pycom05g24390 pycom06g19020 pycom10g15060 pycom10g24800 pycom13g11010 pycom16g10800 pycom16g10810 pycom17g22350 pycom17g22360
rosa_chinensis RchiOBHm_Chr2g0136111 RchiOBHm_Chr4g0429291 RchiOBHm_Chr7g0184981 RchiOBHm_Chr7g0184991 RchiOBHm_Chr7g0185001 RchiOBHm_Chr7g0204841
rosa_laevigata RLG00000003427 RLG00000004941 RLG00000004943 RLG00000004944 RLG00000004945 RLG00000004946 RLG00000007084 RLG00000013701 RLG00000019505 RLG00000019506
rosa_multiflora Rmu_co8294559.1_g000001 Rmu_co8375195.1_g000001 Rmu_co8450783.1_g000001 Rmu_co8519567.1_g000001 Rmu_sc0000054.1_g000008 Rmu_sc0001689.1_g000017 Rmu_sc0001801.1_g000027 Rmu_sc0002070.1_g000010 Rmu_sc0002180.1_g000022 Rmu_sc0002986.1_g000018 Rmu_sc0003221.1_g000027 Rmu_sc0005629.1_g000018 Rmu_sc0009898.1_g000002 Rmu_sc0018428.1_g000003 Rmu_sc0018428.1_g000005 Rmu_sc0022816.1_g000001 Rmu_sc0041781.1_g000001 Rmu_ssc0000289.1_g000007 Rmu_ssc0000289.1_g000008 Rmu_ssc0000289.1_g000010
rosa_roxburghii Rroxscaffold_2G00108460 Rroxscaffold_3G00252720 Rroxscaffold_3G00269290 Rroxscaffold_5G00349680 Rroxscaffold_5G00370900 Rroxscaffold_6G00415020
rosa_rugosa Rorug01G0043400 Rorug02G0328200 Rorug04G0234800 Rorug06G0465600 Rorug06G0465800 Rorug06G0465900 Rorug06G0466000 Rorug06G0466100 Rorug07G0086200 Rorug07G0086200
rosa_samantha Rh2BG386700 Rh2CG365900 Rh2DG402800 Rh4AG290400 Rh4BG296100 Rh4CG311900 Rh4DG293300 Rh7AG077000 Rh7AG077100 Rh7AG077200 Rh7AG216600 Rh7BG070200 Rh7BG070300 Rh7BG070400 Rh7BG213700 Rh7CG071400 Rh7CG071600 Rh7CG071700 Rh7CG071900 Rh7CG230100 Rh7DG070800 Rh7DG070900 Rh7DG224200 Rh7DG440100
rosa_wichuraiana Rw2G030970 Rw4G025150 Rw7G005840 Rw7G005850 Rw7G005860 Rw7G018770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1297
AasI GACNNNNNNGTC 2 cut(s) 104, 508
Acc36I ACCTGC 2 cut(s) 462, 1297
Acc65I GGTACC 1 cut(s) 771
AccB1I GGYRCC 7 cut(s) 335, 771, 1057, 1100, 1115, 1828, 1876
AccB7I CCANNNNNTGG 1 cut(s) 1110
AccBSI CCGCTC 1 cut(s) 627
AccI GTMKAC 1 cut(s) 1232
AccII CGCG 3 cut(s) 324, 422, 594
AccIII TCCGGA 2 cut(s) 985, 1394
AclWI GGATC 3 cut(s) 194, 825, 1603
AcoI YGGCCR 4 cut(s) 631, 750, 1242, 1311
AcsI RAATTY 3 cut(s) 853, 1685, 1924
AcuI CTGAAG 3 cut(s) 556, 1304, 1658
AcyI GRCGYC 1 cut(s) 245
AfaI GTAC 5 cut(s) 330, 470, 773, 872, 1802
AfiI CCNNNNNNNGG 8 cut(s) 46, 155, 325, 438, 1110, 1475, 1618, 1880
AgsI TTSAA 6 cut(s) 448, 838, 859, 1177, 1351, 1459
AjiI CACGTC 1 cut(s) 226
AjnI CCWGG 6 cut(s) 123, 143, 275, 956, 1879, 1891
AjuI GAANNNNNNNTTGG 4 cut(s) 1037, 1069, 1358, 1390
AluBI AGCT 8 cut(s) 265, 307, 1156, 1318, 1510, 1539, 1936, 2014
AluI AGCT 8 cut(s) 265, 307, 1156, 1318, 1510, 1539, 1936, 2014
Alw21I GWGCWC 1 cut(s) 1252
Alw26I GTCTC 2 cut(s) 1026, 1766
AlwI GGATC 3 cut(s) 194, 825, 1603
AlwNI CAGNNNCTG 1 cut(s) 2014
Ama87I CYCGRG 1 cut(s) 1993
Aor13HI TCCGGA 2 cut(s) 985, 1394
ApaI GGGCCC 1 cut(s) 283
ApeKI GCWGC 4 cut(s) 262, 520, 743, 1985
ApoI RAATTY 3 cut(s) 853, 1685, 1924
ArsI GACNNNNNNTTYG 4 cut(s) 905, 937, 1670, 1702
Asp700I GAANNNNTTC 1 cut(s) 965
Asp718I GGTACC 1 cut(s) 771
AspS9I GGNCC 9 cut(s) 17, 52, 67, 127, 147, 279, 280, 451, 1997
AsuC2I CCSGG 4 cut(s) 47, 785, 1225, 1874
AvaI CYCGRG 1 cut(s) 1993
AvaII GGWCC 3 cut(s) 17, 451, 1997
AxyI CCTNAGG 1 cut(s) 29
BaeGI GKGCMC 1 cut(s) 283
BaeI ACNNNNGTAYC 2 cut(s) 763, 796
BalI TGGCCA 1 cut(s) 752
BanI GGYRCC 7 cut(s) 335, 771, 1057, 1100, 1115, 1828, 1876
BanII GRGCYC 1 cut(s) 283
BbsI GAAGAC 1 cut(s) 506
Bbv12I GWGCWC 1 cut(s) 1252
BbvCI CCTCAGC 2 cut(s) 1040, 1506
BbvI GCAGC 4 cut(s) 274, 507, 755, 1997
BccI CCATC 6 cut(s) 31, 1286, 1292, 1558, 1761, 1946
BceAI ACGGC 4 cut(s) 187, 384, 570, 636
BcgI CGANNNNNNTGC 4 cut(s) 960, 994, 1974, 2008
BciT130I CCWGG 6 cut(s) 125, 145, 277, 958, 1881, 1893
BclI TGATCA 2 cut(s) 1485, 1690
BcnI CCSGG 4 cut(s) 47, 785, 1225, 1874
BcoDI GTCTC 2 cut(s) 1026, 1766
BfaI CTAG 3 cut(s) 407, 479, 660
BfmI CTRYAG 2 cut(s) 521, 790
BfuAI ACCTGC 2 cut(s) 462, 1297
BglI GCCNNNNNGGC 2 cut(s) 758, 1145
BlpI GCTNAGC 1 cut(s) 175
Bme18I GGWCC 3 cut(s) 17, 451, 1997
BmeT110I CYCGRG 1 cut(s) 1993
BmgBI CACGTC 1 cut(s) 226
BmgT120I GGNCC 9 cut(s) 17, 52, 67, 127, 147, 279, 280, 451, 1997
BmrI ACTGGG 1 cut(s) 1579
BmsI GCATC 3 cut(s) 991, 997, 1813
BmuI ACTGGG 1 cut(s) 1579
BpiI GAAGAC 1 cut(s) 506
BplI GAGNNNNNCTC 2 cut(s) 158, 190
Bpu10I CCTNAGC 2 cut(s) 1040, 1506
Bpu1102I GCTNAGC 1 cut(s) 175
BpuEI CTTGAG 2 cut(s) 287, 1916
BpuMI CCSGG 4 cut(s) 47, 785, 1225, 1874
BsaAI YACGTR 1 cut(s) 332
BsaHI GRCGYC 1 cut(s) 245
BsaI GGTCTC 1 cut(s) 1026
BsaJI CCNNGG 9 cut(s) 45, 276, 322, 747, 1469, 1760, 1872, 1880, 1977
BsaWI WCCGGW 2 cut(s) 985, 1394
BsaXI ACNNNNNCTCC 6 cut(s) 452, 482, 1293, 1323, 1799, 1829
Bsc4I CCNNNNNNNGG 8 cut(s) 46, 155, 325, 438, 1110, 1475, 1618, 1880
Bse118I RCCGGY 4 cut(s) 194, 338, 1035, 1244
Bse1I ACTGG 1 cut(s) 1574
Bse21I CCTNAGG 1 cut(s) 29
Bse3DI GCAATG 2 cut(s) 951, 1534
BseAI TCCGGA 2 cut(s) 985, 1394
BseBI CCWGG 6 cut(s) 125, 145, 277, 958, 1881, 1893
BseDI CCNNGG 9 cut(s) 45, 276, 322, 747, 1469, 1760, 1872, 1880, 1977
BseLI CCNNNNNNNGG 8 cut(s) 46, 155, 325, 438, 1110, 1475, 1618, 1880
BseMI GCAATG 2 cut(s) 951, 1534
BseMII CTCAG 8 cut(s) 43, 189, 1031, 1443, 1520, 1539, 1844, 1898
BseNI ACTGG 1 cut(s) 1574
BseRI GAGGAG 3 cut(s) 591, 1202, 1478
BseSI GKGCMC 1 cut(s) 283
BseX3I CGGCCG 1 cut(s) 1242
BseXI GCAGC 4 cut(s) 274, 507, 755, 1997
BseYI CCCAGC 1 cut(s) 129
Bsh1236I CGCG 3 cut(s) 324, 422, 594
Bsh1285I CGRYCG 1 cut(s) 1245
BshNI GGYRCC 7 cut(s) 335, 771, 1057, 1100, 1115, 1828, 1876
BsiEI CGRYCG 1 cut(s) 1245
BsiHKAI GWGCWC 1 cut(s) 1252
BsiHKCI CYCGRG 1 cut(s) 1993
BslFI GGGAC 5 cut(s) 215, 409, 1423, 1871, 1897
BslI CCNNNNNNNGG 8 cut(s) 46, 155, 325, 438, 1110, 1475, 1618, 1880
BsmAI GTCTC 2 cut(s) 1026, 1766
BsmFI GGGAC 5 cut(s) 215, 409, 1423, 1871, 1897
Bso31I GGTCTC 1 cut(s) 1026
BsoBI CYCGRG 1 cut(s) 1993
Bsp120I GGGCCC 1 cut(s) 279
Bsp1286I GDGCHC 2 cut(s) 283, 1252
Bsp13I TCCGGA 2 cut(s) 985, 1394
Bsp1720I GCTNAGC 1 cut(s) 175
Bsp19I CCATGG 3 cut(s) 747, 1469, 1977
BspCNI CTCAG 8 cut(s) 42, 188, 1032, 1444, 1519, 1540, 1845, 1899
BspEI TCCGGA 2 cut(s) 985, 1394
BspFNI CGCG 3 cut(s) 324, 422, 594
BspMAI CTGCAG 1 cut(s) 525
BspMI ACCTGC 2 cut(s) 462, 1297
BspPI GGATC 3 cut(s) 194, 825, 1603
BspQI GCTCTTC 1 cut(s) 12
BspT107I GGYRCC 7 cut(s) 335, 771, 1057, 1100, 1115, 1828, 1876
BspTNI GGTCTC 1 cut(s) 1026
BsrBI CCGCTC 1 cut(s) 627
BsrDI GCAATG 2 cut(s) 951, 1534
BsrFI RCCGGY 4 cut(s) 194, 338, 1035, 1244
BsrI ACTGG 1 cut(s) 1574
BssAI RCCGGY 4 cut(s) 194, 338, 1035, 1244
BssECI CCNNGG 9 cut(s) 45, 276, 322, 747, 1469, 1760, 1872, 1880, 1977
BssNI GRCGYC 1 cut(s) 245
BssT1I CCWWGG 4 cut(s) 747, 1469, 1760, 1977
Bst2UI CCWGG 6 cut(s) 125, 145, 277, 958, 1881, 1893
Bst6I CTCTTC 3 cut(s) 12, 221, 1322
BstACI GRCGYC 1 cut(s) 245
BstAPI GCANNNNNTGC 1 cut(s) 1016
BstBAI YACGTR 1 cut(s) 332
BstC8I GCNNGC 1 cut(s) 412
BstDEI CTNAG 9 cut(s) 29, 175, 1040, 1452, 1506, 1535, 1548, 1853, 1907
BstDSI CCRYGG 4 cut(s) 322, 747, 1469, 1977
BstFNI CGCG 3 cut(s) 324, 422, 594
BstMAI GTCTC 2 cut(s) 1026, 1766
BstMCI CGRYCG 1 cut(s) 1245
BstNI CCWGG 6 cut(s) 125, 145, 277, 958, 1881, 1893
BstSFI CTRYAG 2 cut(s) 521, 790
BstSLI GKGCMC 1 cut(s) 283
BstUI CGCG 3 cut(s) 324, 422, 594
BstV1I GCAGC 4 cut(s) 274, 507, 755, 1997
BstV2I GAAGAC 1 cut(s) 506
BstX2I RGATCY 1 cut(s) 817
BstXI CCANNNNNNTGG 1 cut(s) 1767
BstYI RGATCY 1 cut(s) 817
BstZI CGGCCG 1 cut(s) 1242
Bsu36I CCTNAGG 1 cut(s) 29
BtgI CCRYGG 4 cut(s) 322, 747, 1469, 1977
BtgZI GCGATG 1 cut(s) 1163
BtrI CACGTC 1 cut(s) 226
BtsIMutI CAGTG 4 cut(s) 1328, 1501, 1581, 1681
BveI ACCTGC 2 cut(s) 462, 1297
Cac8I GCNNGC 1 cut(s) 412
CaiI CAGNNNCTG 1 cut(s) 2014
Cfr10I RCCGGY 4 cut(s) 194, 338, 1035, 1244
Cfr13I GGNCC 9 cut(s) 17, 52, 67, 127, 147, 279, 280, 451, 1997
Cfr42I CCGCGG 1 cut(s) 325
CseI GACGC 4 cut(s) 234, 411, 511, 600
Csp6I GTAC 5 cut(s) 329, 469, 772, 871, 1801
CspCI CAANNNNNGTGG 2 cut(s) 610, 645
CviAII CATG 8 cut(s) 103, 748, 1181, 1262, 1402, 1470, 1681, 1978
CviQI GTAC 5 cut(s) 329, 469, 772, 871, 1801
DdeI CTNAG 9 cut(s) 29, 175, 1040, 1452, 1506, 1535, 1548, 1853, 1907
DrdI GACNNNNNNGTC 2 cut(s) 104, 508
DseDI GACNNNNNNGTC 2 cut(s) 104, 508
EaeI YGGCCR 4 cut(s) 631, 750, 1242, 1311
EagI CGGCCG 1 cut(s) 1242
Eam1104I CTCTTC 3 cut(s) 12, 221, 1322
EarI CTCTTC 3 cut(s) 12, 221, 1322
EclXI CGGCCG 1 cut(s) 1242
Eco130I CCWWGG 4 cut(s) 747, 1469, 1760, 1977
Eco147I AGGCCT 1 cut(s) 716
Eco24I GRGCYC 1 cut(s) 283
Eco31I GGTCTC 1 cut(s) 1026
Eco47I GGWCC 3 cut(s) 17, 451, 1997
Eco52I CGGCCG 1 cut(s) 1242
Eco57I CTGAAG 3 cut(s) 556, 1304, 1658
Eco81I CCTNAGG 1 cut(s) 29
Eco88I CYCGRG 1 cut(s) 1993
EcoO109I RGGNCCY 2 cut(s) 147, 451
EcoRII CCWGG 6 cut(s) 123, 143, 275, 956, 1879, 1891
EcoT14I CCWWGG 4 cut(s) 747, 1469, 1760, 1977
EcoT38I GRGCYC 1 cut(s) 283
ErhI CCWWGG 4 cut(s) 747, 1469, 1760, 1977
FaeI CATG 8 cut(s) 106, 751, 1184, 1265, 1405, 1473, 1684, 1981
FalI AAGNNNNNCTT 4 cut(s) 1358, 1390, 1925, 1957
FaqI GGGAC 5 cut(s) 215, 409, 1423, 1871, 1897
FatI CATG 8 cut(s) 102, 747, 1180, 1261, 1401, 1469, 1680, 1977
FauI CCCGC 1 cut(s) 317
FbaI TGATCA 2 cut(s) 1485, 1690
FblI GTMKAC 1 cut(s) 1232
FriOI GRGCYC 1 cut(s) 283
FspBI CTAG 3 cut(s) 407, 479, 660
GsaI CCCAGC 1 cut(s) 133
HgaI GACGC 4 cut(s) 234, 411, 511, 600
Hin1I GRCGYC 1 cut(s) 245
Hin1II CATG 8 cut(s) 106, 751, 1184, 1265, 1405, 1473, 1684, 1981
HindIII AAGCTT 1 cut(s) 1154
Hpy166II GTNNAC 1 cut(s) 1233
Hpy188III TCNNGA 6 cut(s) 479, 911, 986, 1174, 1395, 2000
Hpy8I GTNNAC 1 cut(s) 1233
Hpy99I CGWCG 3 cut(s) 230, 250, 422
HpyCH4IV ACGT 3 cut(s) 225, 331, 417
HpyCH4V TGCA 5 cut(s) 315, 414, 523, 802, 1010
HpyF3I CTNAG 9 cut(s) 29, 175, 1040, 1452, 1506, 1535, 1548, 1853, 1907
HpySE526I ACGT 3 cut(s) 225, 331, 417
Hsp92I GRCGYC 1 cut(s) 245
Hsp92II CATG 8 cut(s) 106, 751, 1184, 1265, 1405, 1473, 1684, 1981
Kpn2I TCCGGA 2 cut(s) 985, 1394
KpnI GGTACC 1 cut(s) 775
Ksp22I TGATCA 2 cut(s) 1485, 1690
KspI CCGCGG 1 cut(s) 325
LguI GCTCTTC 1 cut(s) 12
LmnI GCTCC 5 cut(s) 270, 387, 1465, 1544, 1645
Lsp1109I GCAGC 4 cut(s) 274, 507, 755, 1997
LweI GCATC 3 cut(s) 991, 997, 1813
MaeI CTAG 3 cut(s) 407, 479, 660
MaeII ACGT 3 cut(s) 225, 331, 417
MaeIII GTNAC 4 cut(s) 187, 779, 1676, 1902
MbiI CCGCTC 1 cut(s) 627
MboII GAAGA 7 cut(s) 208, 211, 511, 562, 889, 1339, 1378
MflI RGATCY 1 cut(s) 817
MhlI GDGCHC 2 cut(s) 283, 1252
MlsI TGGCCA 1 cut(s) 752
MluCI AATT 4 cut(s) 853, 999, 1685, 1924
MluNI TGGCCA 1 cut(s) 752
MlyI GAGTC 5 cut(s) 908, 1035, 1405, 1853, 1879
MmeI TCCRAC 1 cut(s) 1056
Mox20I TGGCCA 1 cut(s) 752
MroI TCCGGA 2 cut(s) 985, 1394
MroXI GAANNNNTTC 1 cut(s) 965
MscI TGGCCA 1 cut(s) 752
MseI TTAA 2 cut(s) 1197, 1656
MslI CAYNNNNRTG 1 cut(s) 1976
Msp20I TGGCCA 1 cut(s) 752
MspA1I CMGCKG 1 cut(s) 324
MvaI CCWGG 6 cut(s) 125, 145, 277, 958, 1881, 1893
MvnI CGCG 3 cut(s) 324, 422, 594
NciI CCSGG 4 cut(s) 47, 785, 1225, 1874
NcoI CCATGG 3 cut(s) 747, 1469, 1977
NlaIII CATG 8 cut(s) 106, 751, 1184, 1265, 1405, 1473, 1684, 1981
NmeAIII GCCGAG 1 cut(s) 1339
NmuCI GTSAC 3 cut(s) 187, 779, 1676
PaqCI CACCTGC 1 cut(s) 1297
PceI AGGCCT 1 cut(s) 716
PciSI GCTCTTC 1 cut(s) 12
PdmI GAANNNNTTC 1 cut(s) 965
PfeI GAWTC 8 cut(s) 360, 463, 795, 977, 1633, 1789, 1849, 1960
PflMI CCANNNNNTGG 1 cut(s) 1110
PleI GAGTC 5 cut(s) 908, 1034, 1405, 1853, 1879
PpsI GAGTC 5 cut(s) 908, 1034, 1405, 1853, 1879
Ppu21I YACGTR 1 cut(s) 332
PpuMI RGGWCCY 1 cut(s) 451
Psp5II RGGWCCY 1 cut(s) 451
Psp6I CCWGG 6 cut(s) 123, 143, 275, 956, 1879, 1891
PspFI CCCAGC 1 cut(s) 129
PspGI CCWGG 6 cut(s) 123, 143, 275, 956, 1879, 1891
PspOMI GGGCCC 1 cut(s) 279
PspPI GGNCC 9 cut(s) 17, 52, 67, 127, 147, 279, 280, 451, 1997
PspPPI RGGWCCY 1 cut(s) 451
PstI CTGCAG 1 cut(s) 525
PstNI CAGNNNCTG 1 cut(s) 2014
PsuI RGATCY 1 cut(s) 817
RsaI GTAC 5 cut(s) 330, 470, 773, 872, 1802
RsaNI GTAC 5 cut(s) 329, 469, 772, 871, 1801
RseI CAYNNNNRTG 1 cut(s) 1976
SacII CCGCGG 1 cut(s) 325
SapI GCTCTTC 1 cut(s) 12
SaqAI TTAA 2 cut(s) 1197, 1656
Sau96I GGNCC 9 cut(s) 17, 52, 67, 127, 147, 279, 280, 451, 1997
SchI GAGTC 5 cut(s) 908, 1035, 1405, 1853, 1879
SduI GDGCHC 2 cut(s) 283, 1252
SfaNI GCATC 3 cut(s) 991, 997, 1813
SfcI CTRYAG 2 cut(s) 521, 790
Sfr303I CCGCGG 1 cut(s) 325
SgrAI CRCCGGYG 1 cut(s) 194
SgrBI CCGCGG 1 cut(s) 325
SinI GGWCC 3 cut(s) 17, 451, 1997
SmiMI CAYNNNNRTG 1 cut(s) 1976
SmlI CTYRAG 2 cut(s) 302, 1931
SmoI CTYRAG 2 cut(s) 302, 1931
Sse9I AATT 4 cut(s) 853, 999, 1685, 1924
SseBI AGGCCT 1 cut(s) 716
SspMI CTAG 3 cut(s) 407, 479, 660
StuI AGGCCT 1 cut(s) 716
StyI CCWWGG 4 cut(s) 747, 1469, 1760, 1977
TaiI ACGT 3 cut(s) 228, 334, 420
TaqI TCGA 3 cut(s) 96, 210, 1862
TaqII GACCGA 1 cut(s) 5
TasI AATT 4 cut(s) 853, 999, 1685, 1924
TatI WGTACW 2 cut(s) 870, 1800
TauI GCSGC 8 cut(s) 53, 374, 560, 588, 597, 600, 893, 1244
TfiI GAWTC 8 cut(s) 360, 463, 795, 977, 1633, 1789, 1849, 1960
Tru1I TTAA 2 cut(s) 1197, 1656
Tru9I TTAA 2 cut(s) 1197, 1656
TscAI CASTG 4 cut(s) 1328, 1501, 1588, 1681
TseFI GTSAC 3 cut(s) 187, 779, 1676
TseI GCWGC 4 cut(s) 262, 520, 743, 1985
Tsp45I GTSAC 3 cut(s) 187, 779, 1676
TspDTI ATGAA 5 cut(s) 82, 1008, 1166, 1379, 1418
TspGWI ACGGA 1 cut(s) 555
TspRI CASTG 4 cut(s) 1328, 1501, 1588, 1681
Van91I CCANNNNNTGG 1 cut(s) 1110
VpaK11BI GGWCC 3 cut(s) 17, 451, 1997
XapI RAATTY 3 cut(s) 853, 1685, 1924
XbaI TCTAGA 1 cut(s) 478
XcmI CCANNNNNNNNNTGG 1 cut(s) 151
XmiI GTMKAC 1 cut(s) 1232
XmnI GAANNNNTTC 1 cut(s) 965
XspI CTAG 3 cut(s) 407, 479, 660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.