Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0000250

Physical Location & Seq

Genomic Coordinates Reverse (-)

14290453 .. 14292435

Gene Structure 1983 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g22373.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGTTATACCTCTATTTGGCAGCGTCAAACACAGCAGTAAGTTCAGCTTTGATCAGGAAAGACGATACCATCGAGCTCCTGGTGTACTATGCAGGCAAGGGCTATACCTTGGCAGAAAGCAAGTATCCGGACCTTGAGAAAGTGGCCCTAGCACTCATTGTGACCGCTCGGAAGCTAAGACACTACTTCCAGGCGCATTCCATCACCTTATACACAAACTGCCCTCTACGACAGGTTTTGCAAAGGCTGGAGGCCAGCGGGATGCTGGCCAAATGGGCAATAGAGTTGGGCGAGTTTGACATACATTACATGCCAAGAGTAGCCATCAAGGGGCAAGCGGCTGCGGATTTCATTTCGGAGCTAACCCCCATGAAGGAGCGCGAGGAGCATCCTGAGGTTGGGGGTGAGGTAACGATGGCCCCCAAAGACGTTAGACCGAGTTGTAAGTTGTACGTGGACGGCTCTGTAACTAAAGATAAAAGCAGGGCTGGAATAATATTGGTTAGTCCGGACGGGTTCAAGTACAAGTATGCCCTGGAATTCAAGTTCTCCACATCCAACAACGCGGCCGAGTACAAAGCATTGATCGGGAGACTACAGCTGGCACAAGAGATAGGGGCCAAAAGTGCGTTGGCGAAGGCTCTCCTGAGCAGGTTTGAATTTGCAACAGTCAACCAGATCCCTCAGAAGGATAACAGTAATGCCGACGCATTGGCAAGACTTGCCACCGGCACCCGTCAAAAAGGACGCAAGAAGGTCAAGGTGGAGATCCTTGACAGGCCTAGCATCAGCAAAACGATCTCTGAGGTATTCGCTATCACCGTTGGTCCTAGGGAGCCCGCATGGATGGACCCTATCATCGAATTCCTTAAGGAGGGGGTCCGCCCAGAAAACAGGCGACATGCCAGAAAGTTACAGTCGAGATGTGCGAGATACACATTGATAGACGGAAAGTTGTACCGCAGGGGTTACTGCCTCCCCAACCTGAAGTGTGTATCAGTAAAGGAGGGGGAGACAATCCTACGAGACATCCACGAAGGAGTTTGCGGTAACCACTCTGCATCAAGATCCCTATCTTTCAAAGCGCTACGAACGGGATACTTCTGGTCAAACATGGGAAAGATGGCAAATCAAATGTCAGCGAAATGCCACAAATGCCACCAGCACGCTAACAAAATTCATTCCCCATCTATCGCTCTCTCGATCTTAATGTCTCCATGGCCGTTCGCGGAATGGGGTTTGGATTTGATCGGGAAGCTCCCAACAGCTCCCGGACAGTATAAATACGCCATAGTGGTTGTAGACTACTGCACCAAGTGGGTTGAAGCAGAACTGCTAAGTCGGATAACCACCGAGAATGTAAAGAACTTCCTCATGAAGAATATCTATTGTAAGTTCGGTATCCCGGAAACTATCGTGACGGACAACGGTACACAATTCAACAACCCAAAGCTTATAGAGTTCGCCGAGGGCATGGGAACACGAATGTTGTTCGCATCGGTGGCTTACCCAAAGACCAACGGCCAAGTAGAGGCAGTCAACAAGATCATCAAGAAGCTGTTGAAGAAAAAGTTGGGCGATGCCAAAGGGTCATGGGCACAGAAGCTCCCGGAAACACTGTGGGCCATCCGAACGACAGCGACGGAGTATACGGGAGAAACGCCCTTCAGTCTTGCCTTTGGCACGGAGGCTGTCATTCCAATTGAACTCACAGTGCCATCAGGAAGAGTCGAAGGCTACAATAAAGACACCAATACAGAAGGCCTCCAGCTGAACTCGGATCTCATCGAGGAGAAGAGAGACAAGGCCGACCTGCATAACCAAGTATACAAACAGCGAATGGCCTGGCACTATGACAGTAAGGTCAGGCCCCGATCCTTGGGCCTAAGAGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000943 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0003887 GO:0003964 GO:0004518 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006278 GO:0006508 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009058 GO:0009059 GO:0009987 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0016787 GO:0016788 GO:0018130 GO:0019438 GO:0019538 GO:0032196 GO:0032197 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071897 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0140096 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RVT_1 RVT_3 rve

Protein Analysis

632

Amino Acids

70.85

Weight (kDa)

9.39

Isoelectric Point (pI)

38.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RT_RNaseH_2	PF17919	2 - 69	1.2e-07	RNase H-like domain found in reverse transcriptase
RT_RNaseH	PF17917	3 - 99	3.6e-13	RNase H-like domain found in reverse transcriptase
rve	PF00665	412 - 502	2.5e-10	Integrase core domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000250)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g22373 FvH4_1g22374 FvH4_1g25831 FvH4_1g28031 FvH4_2g11354 FvH4_3g11301 FvH4_3g11302 FvH4_3g14364 FvH4_3g20862 FvH4_4g15482 FvH4_4g15483 FvH4_4g15484 FvH4_5g25502 FvH4_5g37242 FvH4_6g18432 FvH4_6g18433 FvH4_6g20952 FvH4_7g02201 FvH4_7g10991
prunus_persica	Prupe.6G166700_v2.0.a1
pyrus_communis	pycom01g03860 pycom02g16130 pycom05g08340 pycom07g08280 pycom16g20980 pycom16g25810
rosa_chinensis	RchiOBHm_Chr5g0018261
rosa_laevigata	RLG00000022447
rosa_multiflora	Rmu_co7963284.1_g000001 Rmu_co7968088.1_g000001 Rmu_co8036800.1_g000001 Rmu_co8110294.1_g000001 Rmu_co8291955.1_g000001 Rmu_co8396209.1_g000002 Rmu_co8413879.1_g000001 Rmu_co8464165.1_g000001 Rmu_co8469565.1_g000001 Rmu_co8485695.1_g000003 Rmu_co8486821.1_g000003 Rmu_co8515379.1_g000001 Rmu_sc0000239.1_g000074 Rmu_sc0000327.1_g000028 Rmu_sc0000509.1_g000002 Rmu_sc0000677.1_g000042 Rmu_sc0000756.1_g000032 Rmu_sc0000782.1_g000013 Rmu_sc0001144.1_g000044 Rmu_sc0001861.1_g000003 Rmu_sc0002371.1_g000016 Rmu_sc0002451.1_g000061 Rmu_sc0002764.1_g000053 Rmu_sc0002868.1_g000041 Rmu_sc0003735.1_g000026 Rmu_sc0004654.1_g000006 Rmu_sc0005038.1_g000020 Rmu_sc0005236.1_g000001 Rmu_sc0006725.1_g000004 Rmu_sc0010685.1_g000001 Rmu_sc0011973.1_g000010 Rmu_sc0012722.1_g000001 Rmu_sc0015925.1_g000002 Rmu_sc0017188.1_g000001 Rmu_sc0021806.1_g000001 Rmu_sc0033125.1_g000001 Rmu_sc0038204.1_g000001 Rmu_ssc0000215.1_g000038
rosa_roxburghii	Rroxscaffold_1G00001020 Rroxscaffold_1G00027520 Rroxscaffold_3G00228140 Rroxscaffold_4G00320850 Rroxscaffold_4G00321830 Rroxscaffold_4G00321840 Rroxscaffold_4G00332450 Rroxscaffold_5G00344360 Rroxscaffold_5G00365190 Rroxscaffold_5G00377320 Rroxscaffold_5G00377330 Rroxscaffold_7G00183080 Rroxscaffold_7G00184560 Rroxscaffold_7G00216010
rosa_rugosa	Rorug02G0381000
rosa_samantha	Rh1AG155000 Rh1AG167000 Rh2AG095000 Rh3BG335500 Rh4AG082900 Rh4CG090200 Rh5CG445500 Rh7DG403200
rosa_wichuraiana	Rw0G001000 Rw0G014090 Rw0G019800 Rw0G020130 Rw0G020350 Rw1G002560 Rw1G013310 Rw1G014300 Rw1G014670 Rw1G016610 Rw1G021110 Rw1G024950 Rw1G028180 Rw2G020910 Rw2G024170 Rw2G024770 Rw2G029990 Rw2G031960 Rw2G034100 Rw3G013950 Rw3G028980 Rw3G029200 Rw4G004150 Rw4G008130 Rw4G012200 Rw4G018750 Rw4G019330 Rw4G021010 Rw4G022120 Rw4G030810 Rw5G015840 Rw5G015850 Rw5G022430 Rw5G022480 Rw5G026870 Rw5G033550 Rw6G009170 Rw6G010190 Rw6G011570 Rw6G018280 Rw6G023730 Rw7G025660 Rw7G029890 Rw7G031130 Rw7G042550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1862
Acc36I	ACCTGC	2 cut(s)	642, 1821
AccB1I	GGYRCC	1 cut(s)	731
AccBSI	CCGCTC	1 cut(s)	167
AccI	GTMKAC	3 cut(s)	1302, 1649, 1827
AccII	CGCG	3 cut(s)	381, 566, 1229
AccIII	TCCGGA	2 cut(s)	127, 508
AclWI	GGATC	5 cut(s)	673, 763, 1062, 1788, 1869
AcoI	YGGCCR	4 cut(s)	267, 567, 1220, 1522
AcsI	RAATTY	4 cut(s)	539, 659, 863, 1176
AcuI	CTGAAG	2 cut(s)	1007, 1651
AdeI	CACNNNGTG	1 cut(s)	1317
AfaI	GTAC	6 cut(s)	86, 452, 524, 575, 959, 1432
AfeI	AGCGCT	1 cut(s)	1086
AfiI	CCNNNNNNNGG	8 cut(s)	16, 330, 373, 398, 688, 874, 1531, 1879
AflII	CTTAAG	1 cut(s)	869
AgsI	TTSAA	8 cut(s)	520, 544, 659, 1081, 1325, 1441, 1564, 1706
AjnI	CCWGG	4 cut(s)	78, 189, 534, 1844
AjuI	GAANNNNNNNTTGG	2 cut(s)	1556, 1588
AloI	GAACNNNNNNTCC	2 cut(s)	530, 562
Alw21I	GWGCWC	1 cut(s)	78
Alw26I	GTCTC	6 cut(s)	586, 1007, 1020, 1218, 1794, 1884
AlwI	GGATC	5 cut(s)	673, 763, 1062, 1788, 1869
Aor13HI	TCCGGA	2 cut(s)	127, 508
Aor51HI	AGCGCT	1 cut(s)	1086
ApeKI	GCWGC	2 cut(s)	20, 341
ApoI	RAATTY	4 cut(s)	539, 659, 863, 1176
ArsI	GACNNNNNNTTYG	2 cut(s)	1121, 1153
AspA2I	CCTAGG	1 cut(s)	830
AspLEI	GCGC	3 cut(s)	196, 381, 1087
AsuC2I	CCSGG	3 cut(s)	1272, 1406, 1610
AsuHPI	GGTGA	3 cut(s)	196, 416, 811
AvaII	GGWCC	4 cut(s)	130, 827, 850, 880
AvrII	CCTAGG	1 cut(s)	830
AxyI	CCTNAGG	1 cut(s)	393
BaeGI	GKGCMC	1 cut(s)	1600
BalI	TGGCCA	1 cut(s)	269
BanI	GGYRCC	1 cut(s)	731
BanII	GRGCYC	2 cut(s)	78, 840
Bbv12I	GWGCWC	1 cut(s)	78
BbvI	GCAGC	2 cut(s)	32, 328
BccI	CCATC	9 cut(s)	77, 209, 332, 409, 841, 1117, 1195, 1634, 1726
BceAI	ACGGC	3 cut(s)	475, 1207, 1537
BciT130I	CCWGG	4 cut(s)	80, 191, 536, 1846
BciVI	GTATCC	3 cut(s)	135, 1091, 1412
BclI	TGATCA	1 cut(s)	51
BcnI	CCSGG	3 cut(s)	1272, 1406, 1610
BcoDI	GTCTC	6 cut(s)	586, 1007, 1020, 1218, 1794, 1884
BfaI	CTAG	4 cut(s)	149, 783, 831, 1894
BfmI	CTRYAG	1 cut(s)	596
BfoI	RGCGCY	1 cut(s)	1088
BfrI	CTTAAG	1 cut(s)	869
BfuAI	ACCTGC	2 cut(s)	642, 1821
BfuI	GTATCC	3 cut(s)	135, 1091, 1412
BglI	GCCNNNNNGGC	1 cut(s)	275
BisI	GCNGC	4 cut(s)	21, 339, 342, 567
BlnI	CCTAGG	1 cut(s)	830
BlsI	GCNGC	4 cut(s)	22, 340, 343, 568
Bme1390I	CCNGG	7 cut(s)	80, 191, 536, 1272, 1406, 1610, 1846
Bme18I	GGWCC	4 cut(s)	130, 827, 850, 880
BmiI	GGNNCC	7 cut(s)	420, 619, 733, 837, 852, 881, 1871
BmrFI	CCNGG	7 cut(s)	80, 191, 536, 1272, 1406, 1610, 1846
BmsI	GCATC	6 cut(s)	252, 397, 795, 1070, 1505, 1570
BpmI	CTGGAG	2 cut(s)	269, 1751
Bpu10I	CCTNAGC	1 cut(s)	647
BpuEI	CTTGAG	1 cut(s)	155
BpuMI	CCSGG	3 cut(s)	1272, 1406, 1610
BsaAI	YACGTR	1 cut(s)	454
BsaBI	GATNNNNATC	1 cut(s)	1072
BsaJI	CCNNGG	6 cut(s)	108, 534, 830, 1217, 1467, 1878
BsaWI	WCCGGW	2 cut(s)	127, 508
BsaXI	ACNNNNNCTCC	2 cut(s)	1590, 1620
Bsc4I	CCNNNNNNNGG	8 cut(s)	16, 330, 373, 398, 688, 874, 1531, 1879
Bse118I	RCCGGY	1 cut(s)	728
Bse21I	CCTNAGG	1 cut(s)	393
Bse8I	GATNNNNATC	1 cut(s)	1072
BseAI	TCCGGA	2 cut(s)	127, 508
BseBI	CCWGG	4 cut(s)	80, 191, 536, 1846
BseDI	CCNNGG	6 cut(s)	108, 534, 830, 1217, 1467, 1878
BseGI	GGATG	6 cut(s)	267, 388, 554, 852, 1029, 1626
BseJI	GATNNNNATC	1 cut(s)	1072
BseLI	CCNNNNNNNGG	8 cut(s)	16, 330, 373, 398, 688, 874, 1531, 1879
BseMII	CTCAG	4 cut(s)	384, 638, 698, 795
BseRI	GAGGAG	2 cut(s)	398, 1805
BseSI	GKGCMC	1 cut(s)	1600
BseX3I	CGGCCG	1 cut(s)	567
BseXI	GCAGC	2 cut(s)	32, 328
BsgI	GTGCAG	1 cut(s)	1294
Bsh1236I	CGCG	3 cut(s)	381, 566, 1229
Bsh1285I	CGRYCG	1 cut(s)	570
BshNI	GGYRCC	1 cut(s)	731
BsiEI	CGRYCG	1 cut(s)	570
BsiHKAI	GWGCWC	1 cut(s)	78
BsiSI	CCGG	6 cut(s)	128, 509, 729, 1272, 1406, 1610
BslI	CCNNNNNNNGG	8 cut(s)	16, 330, 373, 398, 688, 874, 1531, 1879
BsmAI	GTCTC	6 cut(s)	586, 1007, 1020, 1218, 1794, 1884
BsmI	GAATGC	1 cut(s)	196
Bsp1286I	GDGCHC	3 cut(s)	78, 840, 1600
Bsp13I	TCCGGA	2 cut(s)	127, 508
Bsp19I	CCATGG	1 cut(s)	1217
BspCNI	CTCAG	4 cut(s)	385, 639, 697, 796
BspEI	TCCGGA	2 cut(s)	127, 508
BspFNI	CGCG	3 cut(s)	381, 566, 1229
BspHI	TCATGA	1 cut(s)	1374
BspLI	GGNNCC	7 cut(s)	420, 619, 733, 837, 852, 881, 1871
BspMI	ACCTGC	2 cut(s)	642, 1821
BspPI	GGATC	5 cut(s)	673, 763, 1062, 1788, 1869
BspT107I	GGYRCC	1 cut(s)	731
BspTI	CTTAAG	1 cut(s)	869
BsrBI	CCGCTC	1 cut(s)	167
BsrFI	RCCGGY	1 cut(s)	728
BssAI	RCCGGY	1 cut(s)	728
BssECI	CCNNGG	6 cut(s)	108, 534, 830, 1217, 1467, 1878
BssNAI	GTATAC	2 cut(s)	1650, 1828
BssT1I	CCWWGG	4 cut(s)	108, 830, 1217, 1878
Bst1107I	GTATAC	2 cut(s)	1650, 1828
Bst2UI	CCWGG	4 cut(s)	80, 191, 536, 1846
Bst4CI	ACNGT	9 cut(s)	670, 698, 823, 918, 1278, 1430, 1620, 1714, 1859
Bst6I	CTCTTC	2 cut(s)	1720, 1790
BstAFI	CTTAAG	1 cut(s)	869
BstAPI	GCANNNNNTGC	1 cut(s)	722
BstBAI	YACGTR	1 cut(s)	454
BstC8I	GCNNGC	7 cut(s)	94, 256, 267, 336, 603, 840, 1167
BstDEI	CTNAG	7 cut(s)	176, 393, 647, 684, 804, 1337, 1886
BstDSI	CCRYGG	1 cut(s)	1217
BstEII	GGTNACC	1 cut(s)	1049
BstENI	CCTNNNNNAGG	1 cut(s)	872
BstF5I	GGATG	6 cut(s)	267, 388, 554, 852, 1029, 1626
BstFNI	CGCG	3 cut(s)	381, 566, 1229
BstH2I	RGCGCY	1 cut(s)	1088
BstHHI	GCGC	3 cut(s)	196, 381, 1087
BstMAI	GTCTC	6 cut(s)	586, 1007, 1020, 1218, 1794, 1884
BstMCI	CGRYCG	1 cut(s)	570
BstMWI	GCNNNNNNNGC	6 cut(s)	275, 385, 626, 722, 1155, 1502
BstNI	CCWGG	4 cut(s)	80, 191, 536, 1846
BstNSI	RCATGY	2 cut(s)	313, 905
BstPI	GGTNACC	1 cut(s)	1049
BstSCI	CCNGG	7 cut(s)	78, 189, 534, 1270, 1404, 1608, 1844
BstSFI	CTRYAG	1 cut(s)	596
BstSLI	GKGCMC	1 cut(s)	1600
BstUI	CGCG	3 cut(s)	381, 566, 1229
BstV1I	GCAGC	2 cut(s)	32, 328
BstX2I	RGATCY	4 cut(s)	678, 768, 1067, 1780
BstYI	RGATCY	4 cut(s)	678, 768, 1067, 1780
BstZ17I	GTATAC	2 cut(s)	1650, 1828
BstZI	CGGCCG	1 cut(s)	567
Bsu36I	CCTNAGG	1 cut(s)	393
BsuI	GTATCC	3 cut(s)	135, 1091, 1412
BtgI	CCRYGG	1 cut(s)	1217
BtgZI	GCGATG	1 cut(s)	1593
BtsCI	GGATG	6 cut(s)	267, 388, 554, 852, 1029, 1626
BtsIMutI	CAGTG	2 cut(s)	1616, 1719
BveI	ACCTGC	2 cut(s)	642, 1821
Cac8I	GCNNGC	7 cut(s)	94, 256, 267, 336, 603, 840, 1167
CciI	TCATGA	1 cut(s)	1374
CfoI	GCGC	3 cut(s)	196, 381, 1087
Cfr10I	RCCGGY	1 cut(s)	728
CseI	GACGC	3 cut(s)	12, 716, 756
Csp6I	GTAC	6 cut(s)	85, 451, 523, 574, 958, 1431
CviAII	CATG	9 cut(s)	310, 370, 843, 902, 1114, 1218, 1375, 1474, 1593
CviQI	GTAC	6 cut(s)	85, 451, 523, 574, 958, 1431
DdeI	CTNAG	7 cut(s)	176, 393, 647, 684, 804, 1337, 1886
DraIII	CACNNNGTG	1 cut(s)	1317
DrdI	GACNNNNNNGTC	1 cut(s)	1862
DseDI	GACNNNNNNGTC	1 cut(s)	1862
EaeI	YGGCCR	4 cut(s)	267, 567, 1220, 1522
EagI	CGGCCG	1 cut(s)	567
Eam1104I	CTCTTC	2 cut(s)	1720, 1790
EarI	CTCTTC	2 cut(s)	1720, 1790
EciI	GGCGGA	1 cut(s)	872
Ecl136II	GAGCTC	1 cut(s)	76
EclXI	CGGCCG	1 cut(s)	567
Eco130I	CCWWGG	4 cut(s)	108, 830, 1217, 1878
Eco147I	AGGCCT	2 cut(s)	781, 1764
Eco24I	GRGCYC	2 cut(s)	78, 840
Eco47I	GGWCC	4 cut(s)	130, 827, 850, 880
Eco47III	AGCGCT	1 cut(s)	1086
Eco52I	CGGCCG	1 cut(s)	567
Eco53kI	GAGCTC	1 cut(s)	76
Eco57I	CTGAAG	2 cut(s)	1007, 1651
Eco81I	CCTNAGG	1 cut(s)	393
Eco91I	GGTNACC	1 cut(s)	1049
EcoICRI	GAGCTC	1 cut(s)	76
EcoNI	CCTNNNNNAGG	1 cut(s)	872
EcoO109I	RGGNCCY	1 cut(s)	1869
EcoO65I	GGTNACC	1 cut(s)	1049
EcoRI	GAATTC	2 cut(s)	539, 863
EcoRII	CCWGG	4 cut(s)	78, 189, 534, 1844
EcoT14I	CCWWGG	4 cut(s)	108, 830, 1217, 1878
EcoT38I	GRGCYC	2 cut(s)	78, 840
ErhI	CCWWGG	4 cut(s)	108, 830, 1217, 1878
FaeI	CATG	9 cut(s)	313, 373, 846, 905, 1117, 1221, 1378, 1477, 1596
FalI	AAGNNNNNCTT	2 cut(s)	31, 63
FatI	CATG	9 cut(s)	309, 369, 842, 901, 1113, 1217, 1374, 1473, 1592
FauI	CCCGC	2 cut(s)	251, 847
FbaI	TGATCA	1 cut(s)	51
FblI	GTMKAC	3 cut(s)	1302, 1649, 1827
Fnu4HI	GCNGC	4 cut(s)	21, 339, 342, 567
FokI	GGATG	6 cut(s)	274, 375, 541, 859, 1016, 1613
FriOI	GRGCYC	2 cut(s)	78, 840
Fsp4HI	GCNGC	4 cut(s)	21, 339, 342, 567
FspBI	CTAG	4 cut(s)	149, 783, 831, 1894
GlaI	GCGC	3 cut(s)	195, 380, 1086
GluI	GCNGC	4 cut(s)	21, 339, 342, 567
GsuI	CTGGAG	2 cut(s)	269, 1751
HaeII	RGCGCY	1 cut(s)	1088
HapII	CCGG	6 cut(s)	128, 509, 729, 1272, 1406, 1610
HgaI	GACGC	3 cut(s)	12, 716, 756
HhaI	GCGC	3 cut(s)	196, 381, 1087
Hin1II	CATG	9 cut(s)	313, 373, 846, 905, 1117, 1221, 1378, 1477, 1596
Hin6I	GCGC	3 cut(s)	194, 379, 1085
HinP1I	GCGC	3 cut(s)	194, 379, 1085
HincII	GTYRAC	2 cut(s)	673, 1540
HindII	GTYRAC	2 cut(s)	673, 1540
HindIII	AAGCTT	1 cut(s)	1451
HinfI	GANTC	1 cut(s)	1728
HpaII	CCGG	6 cut(s)	128, 509, 729, 1272, 1406, 1610
HphI	GGTGA	3 cut(s)	196, 416, 811
Hpy166II	GTNNAC	8 cut(s)	85, 457, 673, 1303, 1433, 1540, 1650, 1828
Hpy188I	TCNGA	7 cut(s)	171, 358, 687, 805, 1344, 1631, 1780
Hpy8I	GTNNAC	8 cut(s)	85, 457, 673, 1303, 1433, 1540, 1650, 1828
Hpy99I	CGWCG	2 cut(s)	710, 1645
HpyAV	CCTTC	8 cut(s)	367, 631, 682, 748, 1031, 1675, 1727, 1754
HpyCH4III	ACNGT	9 cut(s)	670, 698, 823, 918, 1278, 1430, 1620, 1714, 1859
HpyCH4IV	ACGT	2 cut(s)	429, 453
HpyCH4V	TGCA	6 cut(s)	92, 241, 665, 1061, 1311, 1816
HpyF10VI	GCNNNNNNNGC	6 cut(s)	275, 385, 626, 722, 1155, 1502
HpyF3I	CTNAG	7 cut(s)	176, 393, 647, 684, 804, 1337, 1886
HpySE526I	ACGT	2 cut(s)	429, 453
Hsp92II	CATG	9 cut(s)	313, 373, 846, 905, 1117, 1221, 1378, 1477, 1596
HspAI	GCGC	3 cut(s)	194, 379, 1085
Kpn2I	TCCGGA	2 cut(s)	127, 508
Ksp22I	TGATCA	1 cut(s)	51
LmnI	GCTCC	8 cut(s)	81, 358, 376, 385, 835, 1263, 1273, 1611
Lsp1109I	GCAGC	2 cut(s)	32, 328
LweI	GCATC	6 cut(s)	252, 397, 795, 1070, 1505, 1570
MaeI	CTAG	4 cut(s)	149, 783, 831, 1894
MaeII	ACGT	2 cut(s)	429, 453
MaeIII	GTNAC	7 cut(s)	160, 409, 466, 912, 968, 1049, 1417
MbiI	CCGCTC	1 cut(s)	167
MboII	GAAGA	4 cut(s)	1390, 1576, 1737, 1807
MfeI	CAATTG	1 cut(s)	1701
MflI	RGATCY	4 cut(s)	678, 768, 1067, 1780
MhlI	GDGCHC	3 cut(s)	78, 840, 1600
MlsI	TGGCCA	1 cut(s)	269
MluCI	AATT	6 cut(s)	539, 659, 863, 1176, 1436, 1701
MluNI	TGGCCA	1 cut(s)	269
MlyI	GAGTC	1 cut(s)	1737
MmeI	TCCRAC	2 cut(s)	582, 1322
Mox20I	TGGCCA	1 cut(s)	269
MroI	TCCGGA	2 cut(s)	127, 508
MscI	TGGCCA	1 cut(s)	269
MseI	TTAA	2 cut(s)	870, 1208
Msp20I	TGGCCA	1 cut(s)	269
MspA1I	CMGCKG	3 cut(s)	258, 601, 1771
MspCI	CTTAAG	1 cut(s)	869
MspI	CCGG	6 cut(s)	128, 509, 729, 1272, 1406, 1610
MspR9I	CCNGG	7 cut(s)	80, 191, 536, 1272, 1406, 1610, 1846
MunI	CAATTG	1 cut(s)	1701
Mva1269I	GAATGC	1 cut(s)	196
MvaI	CCWGG	4 cut(s)	80, 191, 536, 1846
MvnI	CGCG	3 cut(s)	381, 566, 1229
MwoI	GCNNNNNNNGC	6 cut(s)	275, 385, 626, 722, 1155, 1502
NciI	CCSGG	3 cut(s)	1272, 1406, 1610
NcoI	CCATGG	1 cut(s)	1217
NlaIII	CATG	9 cut(s)	313, 373, 846, 905, 1117, 1221, 1378, 1477, 1596
NlaIV	GGNNCC	7 cut(s)	420, 619, 733, 837, 852, 881, 1871
NmeAIII	GCCGAG	2 cut(s)	595, 1492
NmuCI	GTSAC	2 cut(s)	160, 1417
NspI	RCATGY	2 cut(s)	313, 905
PagI	TCATGA	1 cut(s)	1374
PceI	AGGCCT	2 cut(s)	781, 1764
PcsI	WCGNNNNNNNCGW	3 cut(s)	69, 819, 926
PctI	GAATGC	1 cut(s)	196
PfoI	TCCNGGA	3 cut(s)	1270, 1404, 1608
PkrI	GCNGC	4 cut(s)	22, 340, 343, 568
PleI	GAGTC	1 cut(s)	1736
PpsI	GAGTC	1 cut(s)	1736
Ppu21I	YACGTR	1 cut(s)	454
Psp124BI	GAGCTC	1 cut(s)	78
Psp6I	CCWGG	4 cut(s)	78, 189, 534, 1844
PspEI	GGTNACC	1 cut(s)	1049
PspGI	CCWGG	4 cut(s)	78, 189, 534, 1844
PspN4I	GGNNCC	7 cut(s)	420, 619, 733, 837, 852, 881, 1871
PsuI	RGATCY	4 cut(s)	678, 768, 1067, 1780
PvuII	CAGCTG	2 cut(s)	601, 1771
RsaI	GTAC	6 cut(s)	86, 452, 524, 575, 959, 1432
RsaNI	GTAC	6 cut(s)	85, 451, 523, 574, 958, 1431
SacI	GAGCTC	1 cut(s)	78
SaqAI	TTAA	2 cut(s)	870, 1208
SatI	GCNGC	4 cut(s)	21, 339, 342, 567
SchI	GAGTC	1 cut(s)	1737
ScrFI	CCNGG	7 cut(s)	80, 191, 536, 1272, 1406, 1610, 1846
SduI	GDGCHC	3 cut(s)	78, 840, 1600
SfaNI	GCATC	6 cut(s)	252, 397, 795, 1070, 1505, 1570
SfcI	CTRYAG	1 cut(s)	596
SinI	GGWCC	4 cut(s)	130, 827, 850, 880
SmlI	CTYRAG	2 cut(s)	134, 869
SmoI	CTYRAG	2 cut(s)	134, 869
Sse9I	AATT	6 cut(s)	539, 659, 863, 1176, 1436, 1701
SseBI	AGGCCT	2 cut(s)	781, 1764
SspI	AATATT	1 cut(s)	498
SspMI	CTAG	4 cut(s)	149, 783, 831, 1894
SstI	GAGCTC	1 cut(s)	78
StuI	AGGCCT	2 cut(s)	781, 1764
StyD4I	CCNGG	7 cut(s)	78, 189, 534, 1270, 1404, 1608, 1844
StyI	CCWWGG	4 cut(s)	108, 830, 1217, 1878
TaaI	ACNGT	9 cut(s)	670, 698, 823, 918, 1278, 1430, 1620, 1714, 1859
TaiI	ACGT	2 cut(s)	432, 456
TaqI	TCGA	6 cut(s)	72, 861, 920, 1202, 1731, 1788
TaqII	GACCGA	1 cut(s)	451
TasI	AATT	6 cut(s)	539, 659, 863, 1176, 1436, 1701
TatI	WGTACW	3 cut(s)	84, 522, 573
TauI	GCSGC	2 cut(s)	341, 569
Tru1I	TTAA	2 cut(s)	870, 1208
Tru9I	TTAA	2 cut(s)	870, 1208
TscAI	CASTG	2 cut(s)	1623, 1719
TseFI	GTSAC	2 cut(s)	160, 1417
TseI	GCWGC	2 cut(s)	20, 341
Tsp45I	GTSAC	2 cut(s)	160, 1417
TspDTI	ATGAA	4 cut(s)	340, 386, 1169, 1391
TspGWI	ACGGA	4 cut(s)	963, 1436, 1658, 1700
TspRI	CASTG	2 cut(s)	1623, 1719
Vha464I	CTTAAG	1 cut(s)	869
VpaK11BI	GGWCC	4 cut(s)	130, 827, 850, 880
XagI	CCTNNNNNAGG	1 cut(s)	872
XapI	RAATTY	4 cut(s)	539, 659, 863, 1176
XceI	RCATGY	2 cut(s)	313, 905
XcmI	CCANNNNNNNNNTGG	3 cut(s)	76, 262, 628
XmaJI	CCTAGG	1 cut(s)	830
XmiI	GTMKAC	3 cut(s)	1302, 1649, 1827
XspI	CTAG	4 cut(s)	149, 783, 831, 1894

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.