Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000250

Physical Location & Seq

Genomic Coordinates Reverse (-)

19167809 .. 19169149

Gene Structure 1341 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g15483.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1341 bp

ATGGAAAGACCCAAGGAAAGGAATGAAGTGAGTTCGTTGGCCGGGAAGATCGTCGCCCTTGCCAGATTCGTGTCACTACTCACAGATAAGTGTGCCCCTTTCTTTCGGCTGTTGAAAGAGCAGTGGTGTAAGGAGATAATGTGGGGAACCGAGCAGGAAGAGGCATTCAAACAGATAAAGGCATACCTCACATCCGCGCTGGTTTTGTCAAAACCGATCCCGAGCGAGATGCTTTTCTTATACATTGCGGCATCGCAGTTAGCGGTCAGCTCAGTGCTCATAAGAAAGGAGTCCGACATCGAGCATGCAGTGTTCTACACCGGGAAAGGATTCATACCGCCCGAGAGCAGGTACCCGGACGTCGAGAAATTAGCCTTGACACTTATCGTAACCTCTAGAAGGCTCAGACACTATTTCCAAGCACACTCGATAACCCTTTATACCAACCACCTCCAGAGGCAGATCATGCAAAAACCAGAGATCAGTGGGAGGCTAGTAAAATGGGCCATTGAGTTGGGAGAATTTGATATCCATTACCGGCCAAGAGTGGCTATCAAAGGCCAAGCAGCGGTCGACTTTATATTCGAGCTCACGCCCATGAAAGTAATGGGGCAATCAGCCGAGTTCACGCCCATGGAAGTGGTGGGAGAATCGTCCAAGGTCAAACGGGAGGAAAGTGATCCTGGGCCGGCCGTGAAGGCACACATTGAGGAGCCACCGACGCCACTTTGGAAGCTTTTTATTGATGGCTCGGTGACGAGAAATGAAAGCGGGGCGGGAATAATATTGGAGACCCCCGATGGATTTAAACACAAGTACGCCCTGGAATTTCAGTTCAAGACATCAAACAATGCGGCAGAGTACGAAGCCTTAATTGGGGGATTGCAACTCACCCGAGACATCGGTGTGGAGAGAGTGGAAGTGTTTAGTGATTCACAGTTGGTTGTAAATCAAGTCAATGGGAGCTTTGAAGCTAAAGAGCCTCAGTTACACTCTTACCAAGCGCTATCAAAAGCCTTCATGCTGCGTTTCAAGTCGGCCTCTCTCTCTCACATGCCCCGTAAGGAAAACAGTAATGCAGATGCCCTCGCCCGGCTAGCCACCGGAGAGCTTGGGAAAGGCAGAAAGAAGGCAAGGATTGAGGTGCTAGGAAAACCGAGTATCAGTAAAACAATCTCGGAGATATTCATGATCGAGGCGGGACTCGGAGAGCCTACGTGGATGGACCCCATAATCGTGTTCATGAAGGAGGGGGTGCGCCCGGAGGACAGGCAGCAAACACGAAAATTACAATCGAGATGTGCAAGGTACACACTCATGGGCGGGAAGCTATACTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000943 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0003887 GO:0003964 GO:0004518 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006278 GO:0006508 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009058 GO:0009059 GO:0009987 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0016787 GO:0016788 GO:0018130 GO:0019438 GO:0019538 GO:0032196 GO:0032197 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071897 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0140096 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RVT_1 RVT_3 rve

Protein Analysis

447

Amino Acids

50.35

Weight (kDa)

8.98

Isoelectric Point (pI)

38.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RT_RNaseH_2	PF17919	48 - 145	3.1e-17	RNase H-like domain found in reverse transcriptase
RT_RNaseH	PF17917	75 - 175	6.8e-15	RNase H-like domain found in reverse transcriptase
RNase_H	PF00075	246 - 324	2.3e-07	RNase H
RVT_3	PF13456	249 - 366	1.5e-21	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000250)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g22373 FvH4_1g22374 FvH4_1g25831 FvH4_1g28031 FvH4_2g11354 FvH4_3g11301 FvH4_3g11302 FvH4_3g14364 FvH4_3g20862 FvH4_4g15482 FvH4_4g15483 FvH4_4g15484 FvH4_5g25502 FvH4_5g37242 FvH4_6g18432 FvH4_6g18433 FvH4_6g20952 FvH4_7g02201 FvH4_7g10991
prunus_persica	Prupe.6G166700_v2.0.a1
pyrus_communis	pycom01g03860 pycom02g16130 pycom05g08340 pycom07g08280 pycom16g20980 pycom16g25810
rosa_chinensis	RchiOBHm_Chr5g0018261
rosa_laevigata	RLG00000022447
rosa_multiflora	Rmu_co7963284.1_g000001 Rmu_co7968088.1_g000001 Rmu_co8036800.1_g000001 Rmu_co8110294.1_g000001 Rmu_co8291955.1_g000001 Rmu_co8396209.1_g000002 Rmu_co8413879.1_g000001 Rmu_co8464165.1_g000001 Rmu_co8469565.1_g000001 Rmu_co8485695.1_g000003 Rmu_co8486821.1_g000003 Rmu_co8515379.1_g000001 Rmu_sc0000239.1_g000074 Rmu_sc0000327.1_g000028 Rmu_sc0000509.1_g000002 Rmu_sc0000677.1_g000042 Rmu_sc0000756.1_g000032 Rmu_sc0000782.1_g000013 Rmu_sc0001144.1_g000044 Rmu_sc0001861.1_g000003 Rmu_sc0002371.1_g000016 Rmu_sc0002451.1_g000061 Rmu_sc0002764.1_g000053 Rmu_sc0002868.1_g000041 Rmu_sc0003735.1_g000026 Rmu_sc0004654.1_g000006 Rmu_sc0005038.1_g000020 Rmu_sc0005236.1_g000001 Rmu_sc0006725.1_g000004 Rmu_sc0010685.1_g000001 Rmu_sc0011973.1_g000010 Rmu_sc0012722.1_g000001 Rmu_sc0015925.1_g000002 Rmu_sc0017188.1_g000001 Rmu_sc0021806.1_g000001 Rmu_sc0033125.1_g000001 Rmu_sc0038204.1_g000001 Rmu_ssc0000215.1_g000038
rosa_roxburghii	Rroxscaffold_1G00001020 Rroxscaffold_1G00027520 Rroxscaffold_3G00228140 Rroxscaffold_4G00320850 Rroxscaffold_4G00321830 Rroxscaffold_4G00321840 Rroxscaffold_4G00332450 Rroxscaffold_5G00344360 Rroxscaffold_5G00365190 Rroxscaffold_5G00377320 Rroxscaffold_5G00377330 Rroxscaffold_7G00183080 Rroxscaffold_7G00184560 Rroxscaffold_7G00216010
rosa_rugosa	Rorug02G0381000
rosa_samantha	Rh1AG155000 Rh1AG167000 Rh2AG095000 Rh3BG335500 Rh4AG082900 Rh4CG090200 Rh5CG445500 Rh7DG403200
rosa_wichuraiana	Rw0G001000 Rw0G014090 Rw0G019800 Rw0G020130 Rw0G020350 Rw1G002560 Rw1G013310 Rw1G014300 Rw1G014670 Rw1G016610 Rw1G021110 Rw1G024950 Rw1G028180 Rw2G020910 Rw2G024170 Rw2G024770 Rw2G029990 Rw2G031960 Rw2G034100 Rw3G013950 Rw3G028980 Rw3G029200 Rw4G004150 Rw4G008130 Rw4G012200 Rw4G018750 Rw4G019330 Rw4G021010 Rw4G022120 Rw4G030810 Rw5G015840 Rw5G015850 Rw5G022430 Rw5G022480 Rw5G026870 Rw5G033550 Rw6G009170 Rw6G010190 Rw6G011570 Rw6G018280 Rw6G023730 Rw7G025660 Rw7G029890 Rw7G031130 Rw7G042550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	363
Acc36I	ACCTGC	1 cut(s)	339
Acc65I	GGTACC	1 cut(s)	351
AccB1I	GGYRCC	1 cut(s)	351
AccI	GTMKAC	1 cut(s)	573
AccII	CGCG	1 cut(s)	197
AclWI	GGATC	2 cut(s)	211, 674
AcoI	YGGCCR	3 cut(s)	39, 539, 690
AcsI	RAATTY	2 cut(s)	521, 827
AcyI	GRCGYC	2 cut(s)	360, 722
AfaI	GTAC	4 cut(s)	353, 818, 863, 1310
AfeI	AGCGCT	1 cut(s)	1005
AfiI	CCNNNNNNNGG	6 cut(s)	18, 348, 399, 568, 876, 1092
AgsI	TTSAA	5 cut(s)	115, 169, 838, 971, 1033
AjnI	CCWGG	2 cut(s)	682, 822
AjuI	GAANNNNNNNTTGG	2 cut(s)	858, 890
AloI	GAACNNNNNNTCC	2 cut(s)	818, 850
AluBI	AGCT	7 cut(s)	270, 589, 736, 966, 974, 1111, 1330
AluI	AGCT	7 cut(s)	270, 589, 736, 966, 974, 1111, 1330
Alw21I	GWGCWC	2 cut(s)	279, 591
Alw26I	GTCTC	2 cut(s)	785, 891
AlwI	GGATC	2 cut(s)	211, 674
Ama87I	CYCGRG	3 cut(s)	220, 341, 894
Aor51HI	AGCGCT	1 cut(s)	1005
AoxI	GGCC	7 cut(s)	39, 504, 539, 559, 686, 690, 1038
ApeKI	GCWGC	3 cut(s)	566, 1024, 1273
ApoI	RAATTY	2 cut(s)	521, 827
ArsI	GACNNNNNNTTYG	2 cut(s)	566, 598
Asp700I	GAANNNNTTC	1 cut(s)	329
Asp718I	GGTACC	1 cut(s)	351
AspLEI	GCGC	3 cut(s)	199, 1006, 1260
AspS9I	GGNCC	3 cut(s)	504, 686, 1225
AsuC2I	CCSGG	5 cut(s)	43, 322, 356, 1093, 1262
AsuHPI	GGTGA	2 cut(s)	766, 883
AsuNHI	GCTAGC	1 cut(s)	1096
AvaI	CYCGRG	3 cut(s)	220, 341, 894
AvaII	GGWCC	1 cut(s)	1225
BaeGI	GKGCMC	1 cut(s)	97
BanI	GGYRCC	1 cut(s)	351
BanII	GRGCYC	1 cut(s)	591
Bbv12I	GWGCWC	2 cut(s)	279, 591
BbvI	GCAGC	3 cut(s)	578, 1011, 1285
BccI	CCATC	3 cut(s)	740, 794, 1216
BceAI	ACGGC	1 cut(s)	677
BcgI	CGANNNNNNTGC	2 cut(s)	211, 245
BciT130I	CCWGG	2 cut(s)	684, 824
BcnI	CCSGG	5 cut(s)	43, 322, 356, 1093, 1262
BcoDI	GTCTC	2 cut(s)	785, 891
BfaI	CTAG	4 cut(s)	396, 494, 1097, 1148
BfoI	RGCGCY	1 cut(s)	1007
BfuAI	ACCTGC	1 cut(s)	339
BglI	GCCNNNNNGGC	1 cut(s)	698
BisI	GCNGC	5 cut(s)	249, 567, 855, 1025, 1274
BlsI	GCNGC	5 cut(s)	250, 568, 856, 1026, 1275
Bme1390I	CCNGG	7 cut(s)	43, 322, 356, 684, 824, 1093, 1262
Bme18I	GGWCC	1 cut(s)	1225
BmeT110I	CYCGRG	3 cut(s)	220, 341, 894
BmgT120I	GGNCC	3 cut(s)	504, 686, 1225
BmiI	GGNNCC	4 cut(s)	148, 353, 714, 1227
BmrFI	CCNGG	7 cut(s)	43, 322, 356, 684, 824, 1093, 1262
BmsI	GCATC	3 cut(s)	219, 260, 1072
BmtI	GCTAGC	1 cut(s)	1100
BpmI	CTGGAG	1 cut(s)	437
BpuMI	CCSGG	5 cut(s)	43, 322, 356, 1093, 1262
BsaAI	YACGTR	1 cut(s)	1218
BsaHI	GRCGYC	2 cut(s)	360, 722
BsaI	GGTCTC	1 cut(s)	785
BsaJI	CCNNGG	5 cut(s)	12, 633, 657, 683, 822
BsaWI	WCCGGW	1 cut(s)	1103
BsaXI	ACNNNNNCTCC	2 cut(s)	125, 155
Bsc4I	CCNNNNNNNGG	6 cut(s)	18, 348, 399, 568, 876, 1092
Bse118I	RCCGGY	2 cut(s)	537, 688
Bse3DI	GCAATG	1 cut(s)	243
BseBI	CCWGG	2 cut(s)	684, 824
BseDI	CCNNGG	5 cut(s)	12, 633, 657, 683, 822
BseGI	GGATG	2 cut(s)	191, 1227
BseLI	CCNNNNNNNGG	6 cut(s)	18, 348, 399, 568, 876, 1092
BseMI	GCAATG	1 cut(s)	243
BseMII	CTCAG	3 cut(s)	285, 418, 998
BseRI	GAGGAG	1 cut(s)	725
BseSI	GKGCMC	1 cut(s)	97
BseX3I	CGGCCG	1 cut(s)	690
BseXI	GCAGC	3 cut(s)	578, 1011, 1285
Bsh1236I	CGCG	1 cut(s)	197
Bsh1285I	CGRYCG	2 cut(s)	573, 693
BshFI	GGCC	7 cut(s)	41, 506, 541, 561, 688, 692, 1040
BshNI	GGYRCC	1 cut(s)	351
BsiEI	CGRYCG	2 cut(s)	573, 693
BsiHKAI	GWGCWC	2 cut(s)	279, 591
BsiHKCI	CYCGRG	3 cut(s)	220, 341, 894
BsiSI	CCGG	8 cut(s)	42, 321, 356, 538, 689, 1093, 1104, 1262
BslFI	GGGAC	1 cut(s)	1215
BslI	CCNNNNNNNGG	6 cut(s)	18, 348, 399, 568, 876, 1092
BsmAI	GTCTC	2 cut(s)	785, 891
BsmFI	GGGAC	1 cut(s)	1215
BsmI	GAATGC	1 cut(s)	164
BsnI	GGCC	7 cut(s)	41, 506, 541, 561, 688, 692, 1040
Bso31I	GGTCTC	1 cut(s)	785
BsoBI	CYCGRG	3 cut(s)	220, 341, 894
Bsp1286I	GDGCHC	3 cut(s)	97, 279, 591
Bsp143I	GATC	6 cut(s)	48, 216, 462, 480, 679, 1191
Bsp19I	CCATGG	1 cut(s)	633
BspANI	GGCC	7 cut(s)	41, 506, 541, 561, 688, 692, 1040
BspCNI	CTCAG	3 cut(s)	284, 417, 997
BspFNI	CGCG	1 cut(s)	197
BspHI	TCATGA	2 cut(s)	1188, 1242
BspLI	GGNNCC	4 cut(s)	148, 353, 714, 1227
BspMI	ACCTGC	1 cut(s)	339
BspOI	GCTAGC	1 cut(s)	1100
BspPI	GGATC	2 cut(s)	211, 674
BspT107I	GGYRCC	1 cut(s)	351
BspTNI	GGTCTC	1 cut(s)	785
BsrDI	GCAATG	1 cut(s)	243
BsrFI	RCCGGY	2 cut(s)	537, 688
BssAI	RCCGGY	2 cut(s)	537, 688
BssECI	CCNNGG	5 cut(s)	12, 633, 657, 683, 822
BssMI	GATC	6 cut(s)	48, 216, 462, 480, 679, 1191
BssNI	GRCGYC	2 cut(s)	360, 722
BssT1I	CCWWGG	3 cut(s)	12, 633, 657
Bst2UI	CCWGG	2 cut(s)	684, 824
Bst4CI	ACNGT	2 cut(s)	939, 1073
Bst6I	CTCTTC	1 cut(s)	153
BstACI	GRCGYC	2 cut(s)	360, 722
BstAPI	GCANNNNNTGC	1 cut(s)	466
BstBAI	YACGTR	1 cut(s)	1218
BstC8I	GCNNGC	3 cut(s)	306, 690, 1098
BstDEI	CTNAG	3 cut(s)	271, 404, 984
BstDSI	CCRYGG	1 cut(s)	633
BstENI	CCTNNNNNAGG	1 cut(s)	397
BstF5I	GGATG	2 cut(s)	191, 1227
BstFNI	CGCG	1 cut(s)	197
BstH2I	RGCGCY	1 cut(s)	1007
BstHHI	GCGC	3 cut(s)	199, 1006, 1260
BstKTI	GATC	6 cut(s)	51, 219, 465, 483, 682, 1194
BstMAI	GTCTC	2 cut(s)	785, 891
BstMBI	GATC	6 cut(s)	48, 216, 462, 480, 679, 1191
BstMCI	CGRYCG	2 cut(s)	573, 693
BstMWI	GCNNNNNNNGC	4 cut(s)	466, 698, 721, 1097
BstNI	CCWGG	2 cut(s)	684, 824
BstNSI	RCATGY	2 cut(s)	308, 1057
BstSCI	CCNGG	7 cut(s)	41, 320, 354, 682, 822, 1091, 1260
BstSLI	GKGCMC	1 cut(s)	97
BstUI	CGCG	1 cut(s)	197
BstV1I	GCAGC	3 cut(s)	578, 1011, 1285
BstXI	CCANNNNNNTGG	2 cut(s)	514, 640
BstZI	CGGCCG	1 cut(s)	690
BsuRI	GGCC	7 cut(s)	41, 506, 541, 561, 688, 692, 1040
BtgI	CCRYGG	1 cut(s)	633
BtgZI	GCGATG	1 cut(s)	237
BtsCI	GGATG	2 cut(s)	191, 1227
BtsI	GCAGTG	2 cut(s)	128, 315
BtsIMutI	CAGTG	4 cut(s)	128, 279, 315, 490
BveI	ACCTGC	1 cut(s)	339
Cac8I	GCNNGC	3 cut(s)	306, 690, 1098
CciI	TCATGA	2 cut(s)	1188, 1242
CfoI	GCGC	3 cut(s)	199, 1006, 1260
Cfr10I	RCCGGY	2 cut(s)	537, 688
Cfr13I	GGNCC	3 cut(s)	504, 686, 1225
CseI	GACGC	1 cut(s)	730
Csp6I	GTAC	4 cut(s)	352, 817, 862, 1309
CviAII	CATG	9 cut(s)	305, 466, 598, 634, 1021, 1054, 1189, 1243, 1318
CviQI	GTAC	4 cut(s)	352, 817, 862, 1309
DdeI	CTNAG	3 cut(s)	271, 404, 984
DpnI	GATC	6 cut(s)	50, 218, 464, 482, 681, 1193
DpnII	GATC	6 cut(s)	48, 216, 462, 480, 679, 1191
DraI	TTTAAA	1 cut(s)	808
EaeI	YGGCCR	3 cut(s)	39, 539, 690
EagI	CGGCCG	1 cut(s)	690
Eam1104I	CTCTTC	1 cut(s)	153
EarI	CTCTTC	1 cut(s)	153
Ecl136II	GAGCTC	1 cut(s)	589
EclXI	CGGCCG	1 cut(s)	690
Eco130I	CCWWGG	3 cut(s)	12, 633, 657
Eco24I	GRGCYC	1 cut(s)	591
Eco31I	GGTCTC	1 cut(s)	785
Eco32I	GATATC	1 cut(s)	529
Eco47I	GGWCC	1 cut(s)	1225
Eco47III	AGCGCT	1 cut(s)	1005
Eco52I	CGGCCG	1 cut(s)	690
Eco53kI	GAGCTC	1 cut(s)	589
Eco88I	CYCGRG	3 cut(s)	220, 341, 894
EcoICRI	GAGCTC	1 cut(s)	589
EcoNI	CCTNNNNNAGG	1 cut(s)	397
EcoRII	CCWGG	2 cut(s)	682, 822
EcoRV	GATATC	1 cut(s)	529
EcoT14I	CCWWGG	3 cut(s)	12, 633, 657
EcoT38I	GRGCYC	1 cut(s)	591
ErhI	CCWWGG	3 cut(s)	12, 633, 657
FaeI	CATG	9 cut(s)	308, 469, 601, 637, 1024, 1057, 1192, 1246, 1321
FaqI	GGGAC	1 cut(s)	1215
FatI	CATG	9 cut(s)	304, 465, 597, 633, 1020, 1053, 1188, 1242, 1317
FauI	CCCGC	4 cut(s)	764, 769, 1192, 1316
FblI	GTMKAC	1 cut(s)	573
Fnu4HI	GCNGC	5 cut(s)	249, 567, 855, 1025, 1274
FokI	GGATG	2 cut(s)	178, 1234
FriOI	GRGCYC	1 cut(s)	591
FseI	GGCCGGCC	1 cut(s)	692
Fsp4HI	GCNGC	5 cut(s)	249, 567, 855, 1025, 1274
FspBI	CTAG	4 cut(s)	396, 494, 1097, 1148
GlaI	GCGC	3 cut(s)	198, 1005, 1259
GluI	GCNGC	5 cut(s)	249, 567, 855, 1025, 1274
GsuI	CTGGAG	1 cut(s)	437
HaeII	RGCGCY	1 cut(s)	1007
HaeIII	GGCC	7 cut(s)	41, 506, 541, 561, 688, 692, 1040
HapII	CCGG	8 cut(s)	42, 321, 356, 538, 689, 1093, 1104, 1262
HgaI	GACGC	1 cut(s)	730
HhaI	GCGC	3 cut(s)	199, 1006, 1260
Hin1I	GRCGYC	2 cut(s)	360, 722
Hin1II	CATG	9 cut(s)	308, 469, 601, 637, 1024, 1057, 1192, 1246, 1321
Hin6I	GCGC	3 cut(s)	197, 1004, 1258
HinP1I	GCGC	3 cut(s)	197, 1004, 1258
HincII	GTYRAC	1 cut(s)	574
HindII	GTYRAC	1 cut(s)	574
HindIII	AAGCTT	1 cut(s)	734
HinfI	GANTC	6 cut(s)	66, 290, 330, 650, 932, 1203
HpaII	CCGG	8 cut(s)	42, 321, 356, 538, 689, 1093, 1104, 1262
HphI	GGTGA	2 cut(s)	766, 883
Hpy166II	GTNNAC	3 cut(s)	574, 627, 1311
Hpy188I	TCNGA	4 cut(s)	295, 407, 1180, 1208
Hpy188III	TCNNGA	8 cut(s)	220, 364, 396, 454, 838, 1189, 1243, 1296
Hpy8I	GTNNAC	3 cut(s)	574, 627, 1311
Hpy99I	CGWCG	3 cut(s)	56, 365, 724
HpyAV	CCTTC	5 cut(s)	393, 691, 1027, 1123, 1240
HpyCH4III	ACNGT	2 cut(s)	939, 1073
HpyCH4IV	ACGT	2 cut(s)	360, 1217
HpyCH4V	TGCA	5 cut(s)	308, 469, 886, 1079, 1304
HpyF10VI	GCNNNNNNNGC	4 cut(s)	466, 698, 721, 1097
HpyF3I	CTNAG	3 cut(s)	271, 404, 984
HpySE526I	ACGT	2 cut(s)	360, 1217
Hsp92I	GRCGYC	2 cut(s)	360, 722
Hsp92II	CATG	9 cut(s)	308, 469, 601, 637, 1024, 1057, 1192, 1246, 1321
HspAI	GCGC	3 cut(s)	197, 1004, 1258
KpnI	GGTACC	1 cut(s)	355
KroI	GCCGGC	1 cut(s)	688
KroNI	GCCGGC	1 cut(s)	690
Kzo9I	GATC	6 cut(s)	48, 216, 462, 480, 679, 1191
LmnI	GCTCC	2 cut(s)	712, 963
Lsp1109I	GCAGC	3 cut(s)	578, 1011, 1285
LweI	GCATC	3 cut(s)	219, 260, 1072
MaeI	CTAG	4 cut(s)	396, 494, 1097, 1148
MaeII	ACGT	2 cut(s)	360, 1217
MaeIII	GTNAC	4 cut(s)	72, 388, 754, 987
MalI	GATC	6 cut(s)	50, 218, 464, 482, 681, 1193
MboI	GATC	6 cut(s)	48, 216, 462, 480, 679, 1191
MboII	GAAGA	2 cut(s)	58, 170
MhlI	GDGCHC	3 cut(s)	97, 279, 591
MluCI	AATT	5 cut(s)	368, 521, 827, 873, 1286
MlyI	GAGTC	2 cut(s)	299, 1197
MmeI	TCCRAC	1 cut(s)	318
MroNI	GCCGGC	1 cut(s)	688
MroXI	GAANNNNTTC	1 cut(s)	329
MseI	TTAA	2 cut(s)	807, 872
MslI	CAYNNNNRTG	6 cut(s)	596, 632, 638, 905, 1235, 1316
MspA1I	CMGCKG	1 cut(s)	569
MspI	CCGG	8 cut(s)	42, 321, 356, 538, 689, 1093, 1104, 1262
MspR9I	CCNGG	7 cut(s)	43, 322, 356, 684, 824, 1093, 1262
Mva1269I	GAATGC	1 cut(s)	164
MvaI	CCWGG	2 cut(s)	684, 824
MvnI	CGCG	1 cut(s)	197
MwoI	GCNNNNNNNGC	4 cut(s)	466, 698, 721, 1097
NaeI	GCCGGC	1 cut(s)	690
NciI	CCSGG	5 cut(s)	43, 322, 356, 1093, 1262
NcoI	CCATGG	1 cut(s)	633
NdeII	GATC	6 cut(s)	48, 216, 462, 480, 679, 1191
NgoMIV	GCCGGC	1 cut(s)	688
NheI	GCTAGC	1 cut(s)	1096
NlaIII	CATG	9 cut(s)	308, 469, 601, 637, 1024, 1057, 1192, 1246, 1321
NlaIV	GGNNCC	4 cut(s)	148, 353, 714, 1227
NmeAIII	GCCGAG	1 cut(s)	646
NmuCI	GTSAC	2 cut(s)	72, 754
NspI	RCATGY	2 cut(s)	308, 1057
PaeI	GCATGC	1 cut(s)	308
PagI	TCATGA	2 cut(s)	1188, 1242
PctI	GAATGC	1 cut(s)	164
PdiI	GCCGGC	1 cut(s)	690
PdmI	GAANNNNTTC	1 cut(s)	329
PfeI	GAWTC	4 cut(s)	66, 330, 650, 932
PkrI	GCNGC	5 cut(s)	250, 568, 856, 1026, 1275
PleI	GAGTC	2 cut(s)	298, 1197
PpsI	GAGTC	2 cut(s)	298, 1197
Ppu21I	YACGTR	1 cut(s)	1218
Psp124BI	GAGCTC	1 cut(s)	591
Psp6I	CCWGG	2 cut(s)	682, 822
PspGI	CCWGG	2 cut(s)	682, 822
PspN4I	GGNNCC	4 cut(s)	148, 353, 714, 1227
PspPI	GGNCC	3 cut(s)	504, 686, 1225
RigI	GGCCGGCC	1 cut(s)	692
RsaI	GTAC	4 cut(s)	353, 818, 863, 1310
RsaNI	GTAC	4 cut(s)	352, 817, 862, 1309
RseI	CAYNNNNRTG	6 cut(s)	596, 632, 638, 905, 1235, 1316
SacI	GAGCTC	1 cut(s)	591
SalI	GTCGAC	1 cut(s)	572
SaqAI	TTAA	2 cut(s)	807, 872
SatI	GCNGC	5 cut(s)	249, 567, 855, 1025, 1274
Sau3AI	GATC	6 cut(s)	48, 216, 462, 480, 679, 1191
Sau96I	GGNCC	3 cut(s)	504, 686, 1225
SchI	GAGTC	2 cut(s)	299, 1197
ScrFI	CCNGG	7 cut(s)	43, 322, 356, 684, 824, 1093, 1262
SduI	GDGCHC	3 cut(s)	97, 279, 591
SfaNI	GCATC	3 cut(s)	219, 260, 1072
SinI	GGWCC	1 cut(s)	1225
SmiMI	CAYNNNNRTG	6 cut(s)	596, 632, 638, 905, 1235, 1316
SphI	GCATGC	1 cut(s)	308
Sse9I	AATT	5 cut(s)	368, 521, 827, 873, 1286
SspI	AATATT	1 cut(s)	786
SspMI	CTAG	4 cut(s)	396, 494, 1097, 1148
SstI	GAGCTC	1 cut(s)	591
StyD4I	CCNGG	7 cut(s)	41, 320, 354, 682, 822, 1091, 1260
StyI	CCWWGG	3 cut(s)	12, 633, 657
TaaI	ACNGT	2 cut(s)	939, 1073
TaiI	ACGT	2 cut(s)	363, 1220
TaqI	TCGA	7 cut(s)	300, 363, 428, 573, 585, 1194, 1295
TasI	AATT	5 cut(s)	368, 521, 827, 873, 1286
TauI	GCSGC	2 cut(s)	251, 857
TfiI	GAWTC	4 cut(s)	66, 330, 650, 932
Tru1I	TTAA	2 cut(s)	807, 872
Tru9I	TTAA	2 cut(s)	807, 872
TscAI	CASTG	4 cut(s)	128, 279, 315, 490
TseFI	GTSAC	2 cut(s)	72, 754
TseI	GCWGC	3 cut(s)	566, 1024, 1273
Tsp45I	GTSAC	2 cut(s)	72, 754
TspDTI	ATGAA	8 cut(s)	39, 322, 614, 780, 1009, 1177, 1231, 1259
TspRI	CASTG	4 cut(s)	128, 279, 315, 490
VpaK11BI	GGWCC	1 cut(s)	1225
XagI	CCTNNNNNAGG	1 cut(s)	397
XapI	RAATTY	2 cut(s)	521, 827
XbaI	TCTAGA	1 cut(s)	395
XceI	RCATGY	2 cut(s)	308, 1057
XcmI	CCANNNNNNNNNTGG	2 cut(s)	604, 640
XmiI	GTMKAC	1 cut(s)	573
XmnI	GAANNNNTTC	1 cut(s)	329
XspI	CTAG	4 cut(s)	396, 494, 1097, 1148
ZraI	GACGTC	1 cut(s)	361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.