Rw4G012200

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
28713451 .. 28716547
3097 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G012200.1

Sequence Viewer

Length: 2304 bp
ATGTTGCACGTAGATACTAACCCTCTGTTGGACAGATACGAGGATCCCAGGGCCGATACCGACCCGGACGAAGAACGGCCCGGTGCCGTAGAAGACATTGAAGAGGTAGTGCTGTCAGAGCAGTTCCCGGACAGAACTGTTAGGATTGGTACAAGACTGTCTCCGGTTGTCAGGGAAGGATTAATCTCGTTTCTCGGCGCGAACACATCCGCGTTCGCTTGGTCCTATGAGGACATGCCCGGAATACCGCCAGAAGTAGCCACGCACAACCTTAGTATCGTTCCTTACTCAACACCGGTAAGACAAAAGCGAAGGGCCTTCACACACGATAAGTACCGGGCTATCCAGGTTGAGATAAAGAAGTTGATCTCCATCAACTTTGTCAGGGAGGTAACATACCCCCGGTGGTTAGCCAACGTGGTAATGGTACCAAAGAAATCCCCGGGAACATGGCGCATGTGTGTCGACTACACAAACCTCAATCGGGCATGCCCTAAAGATAGCTTCCCGCTCCCGAGAATTGATCAATTGATCGATTCCACCGCTGGGTACCGGTTACTCAGCTTCATGGATGCATTTAGCGGGTACAACCAGATTCGAATGAACCCGGCAGACGAGGAGCATACTACCTTCACTACAGACAAAGGTCTCTATTGCTACCAGGTCATGCCTTTCGGGTTAAAGAATGCAGGTGCCACCTATAAACGACTCGTCAACTCGATGTTTGAGGAAGTTATCGGTACTATCATGGAGTTCCTCGGGTACATCATCAGCCACAGGGGAATTGAAGCCAATCCAGAGAAAGTGCAGGTAATTGACATGGTATCCCCAACCTACCGGAACGAGGTCCAGTCTCTTGTAGGCAAGGTGGCCGCCCTGTCAAGATTCATCTCCAGGCTGACGGACAAGTGTACCCCTTTCTTTAAATTGCTAAAAACCCAACACGTCGAGGTGATAGCCTGGACAGCGGAACACGAGGCTGCTTTCCTTGGCTTGAAGTCGTACCTGTCACAGGTACCTCTACTCTACAAACCTGTTCCCGGAGAAATGCTCTACGTATATCTGGCAGCATCGGCAACTGCTGTGAGCTCAGTCCTGATTAGGAAAGACTCCGATTGTGAGTACCCGGTGTATTACGCTGGGAAGGTTACACTGGTGCAGAGTCCAGGTACCCGGACATTGAAAGACGATTCCCAGTTGTTCGTAAACCAGGTCAGCGGTAACTTCGAGGCAAAGGAACCCCACATGTCCTCCTACCAGGCCTTGGCCCGGGCTTTAGTCCAGAGGTTCACCTCCTACATTTTTACCCAAATACCGAGGGCAGAAAACGACAAGGCAGACGCTCTTGCTAAGCTCGCATCAACTTCTCCAAACCCTACCTATGGGACCACTAAAGTCGAAATACTCGAGGGACCTAGCACTTCCAAAACGGTGTCAGAAATATTTTCGGTGGATCACAAAGCTTCATGGATGGATCCAATTTTGAAATACATGGTTGATGGCCTAGCACCGGATGATAAGGTCGAGGCTAGAAGACTGCAGCTAAGGTCAGCTCGGTACACGATCATGAATGGCAAACTCTACAGGAGAGGACATTGCTTTCCCAACCTGAAGTGTGTGACACCGGAGGAAGGTCACAAAGTAATGACGGACATTCACGCTGGTGTATGTGGTAACCATGCCGGAGCCCGATCTCTTGCACACAAGATCCTAAGGGCAGGATATTTCTGGCCAACCATGTCGGCCCTGGCTCAAACTATATCCAACTACCAAACAAAGTGGGTAGAGGCAGAACCTCTCGTCGCCATCACCACGGAAAAAGTCAAGAACTTCCTCTGGAAGAACATATACTGCAGGTTCGGAGTCCTGGATACCATAGTCACGGACAATGGTACACAGTTTGACAATGATGAGTTGAGGGCTTACACACAGAACCTCGGCACTAAGATCCTCTATGCTTCCCCGGCTCACCCCCAGACAAACGGTCAGGTCGAAGCTATCAACAATATAATCAAGAAGATACTGAAAAAGAAGCTTGACGAAGCCAAGGGTCTTTGGGCCGCTAAACTCCCGGAAGTGCTATGGGCTATCAGGACAACGGCAACAGAGGCCACGGGCGAGACCCCTTTCTGCATGGCTTTTGGATCAGAAGCAGTACTCCCTATTGAAACACAAGTCCAGAGCCCCGGATCGAATACTTCGATGCAGGTACCAACTCAGATGGCCTACACCTCGATGCTGATTTACTTGAGGAGCGAAGAGAAGTCGCACATATGCATAACTTGGCAAACAAGCGGAGGATAG

Protein Analysis

767

Amino Acids

86.1

Weight (kDa)

7.87

Isoelectric Point (pI)

34.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 143 - 248 7.8e-19 Reverse transcriptase (RNA-dependent DNA polymerase)
RT_RNaseH_2 PF17919 321 - 382 1.1e-08 RNase H-like domain found in reverse transcriptase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000250)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22373 FvH4_1g22374 FvH4_1g25831 FvH4_1g28031 FvH4_2g11354 FvH4_3g11301 FvH4_3g11302 FvH4_3g14364 FvH4_3g20862 FvH4_4g15482 FvH4_4g15483 FvH4_4g15484 FvH4_5g25502 FvH4_5g37242 FvH4_6g18432 FvH4_6g18433 FvH4_6g20952 FvH4_7g02201 FvH4_7g10991
prunus_persica Prupe.6G166700_v2.0.a1
pyrus_communis pycom01g03860 pycom02g16130 pycom05g08340 pycom07g08280 pycom16g20980 pycom16g25810
rosa_chinensis RchiOBHm_Chr5g0018261
rosa_laevigata RLG00000022447
rosa_multiflora Rmu_co7963284.1_g000001 Rmu_co7968088.1_g000001 Rmu_co8036800.1_g000001 Rmu_co8110294.1_g000001 Rmu_co8291955.1_g000001 Rmu_co8396209.1_g000002 Rmu_co8413879.1_g000001 Rmu_co8464165.1_g000001 Rmu_co8469565.1_g000001 Rmu_co8485695.1_g000003 Rmu_co8486821.1_g000003 Rmu_co8515379.1_g000001 Rmu_sc0000239.1_g000074 Rmu_sc0000327.1_g000028 Rmu_sc0000509.1_g000002 Rmu_sc0000677.1_g000042 Rmu_sc0000756.1_g000032 Rmu_sc0000782.1_g000013 Rmu_sc0001144.1_g000044 Rmu_sc0001861.1_g000003 Rmu_sc0002371.1_g000016 Rmu_sc0002451.1_g000061 Rmu_sc0002764.1_g000053 Rmu_sc0002868.1_g000041 Rmu_sc0003735.1_g000026 Rmu_sc0004654.1_g000006 Rmu_sc0005038.1_g000020 Rmu_sc0005236.1_g000001 Rmu_sc0006725.1_g000004 Rmu_sc0010685.1_g000001 Rmu_sc0011973.1_g000010 Rmu_sc0012722.1_g000001 Rmu_sc0015925.1_g000002 Rmu_sc0017188.1_g000001 Rmu_sc0021806.1_g000001 Rmu_sc0033125.1_g000001 Rmu_sc0038204.1_g000001 Rmu_ssc0000215.1_g000038
rosa_roxburghii Rroxscaffold_1G00001020 Rroxscaffold_1G00027520 Rroxscaffold_3G00228140 Rroxscaffold_4G00320850 Rroxscaffold_4G00321830 Rroxscaffold_4G00321840 Rroxscaffold_4G00332450 Rroxscaffold_5G00344360 Rroxscaffold_5G00365190 Rroxscaffold_5G00377320 Rroxscaffold_5G00377330 Rroxscaffold_7G00183080 Rroxscaffold_7G00184560 Rroxscaffold_7G00216010
rosa_rugosa Rorug02G0381000
rosa_samantha Rh1AG155000 Rh1AG167000 Rh2AG095000 Rh3BG335500 Rh4AG082900 Rh4CG090200 Rh5CG445500 Rh7DG403200
rosa_wichuraiana Rw0G001000 Rw0G014090 Rw0G019800 Rw0G020130 Rw0G020350 Rw1G002560 Rw1G013310 Rw1G014300 Rw1G014670 Rw1G016610 Rw1G021110 Rw1G024950 Rw1G028180 Rw2G020910 Rw2G024170 Rw2G024770 Rw2G029990 Rw2G031960 Rw2G034100 Rw3G013950 Rw3G028980 Rw3G029200 Rw4G004150 Rw4G008130 Rw4G012200 Rw4G018750 Rw4G019330 Rw4G021010 Rw4G022120 Rw4G030810 Rw5G015840 Rw5G015850 Rw5G022430 Rw5G022480 Rw5G026870 Rw5G033550 Rw6G009170 Rw6G010190 Rw6G011570 Rw6G018280 Rw6G023730 Rw7G025660 Rw7G029890 Rw7G031130 Rw7G042550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 680
Acc36I ACCTGC 4 cut(s) 680, 799, 1845, 2197
Acc65I GGTACC 5 cut(s) 427, 549, 1015, 1169, 2209
AccB1I GGYRCC 7 cut(s) 83, 427, 549, 692, 1015, 1169, 2209
AccB7I CCANNNNNTGG 1 cut(s) 1264
AccBSI CCGCTC 1 cut(s) 511
AccI GTMKAC 1 cut(s) 465
AccII CGCG 2 cut(s) 200, 212
AclWI GGATC 9 cut(s) 38, 51, 1461, 1469, 1482, 1702, 1942, 2152, 2197
AcoI YGGCCR 2 cut(s) 870, 1730
AcuI CTGAAG 1 cut(s) 1631
AflIII ACRYGT 2 cut(s) 943, 1245
AgeI ACCGGT 2 cut(s) 295, 552
AgsI TTSAA 6 cut(s) 101, 788, 997, 1183, 1486, 2168
AhdI GACNNNNNGTC 1 cut(s) 1983
AjiI CACGTC 1 cut(s) 946
AleI CACNNNNGTG 1 cut(s) 1662
AluBI AGCT 9 cut(s) 504, 564, 1089, 1354, 1463, 1543, 1553, 1997, 2035
AluI AGCT 9 cut(s) 504, 564, 1089, 1354, 1463, 1543, 1553, 1997, 2035
Alw21I GWGCWC 1 cut(s) 1091
Alw26I GTCTC 4 cut(s) 165, 653, 858, 2114
AlwI GGATC 9 cut(s) 38, 51, 1461, 1469, 1482, 1702, 1942, 2152, 2197
Ama87I CYCGRG 5 cut(s) 442, 514, 758, 1269, 1406
ApeKI GCWGC 3 cut(s) 980, 1067, 1540
AseI ATTAAT 1 cut(s) 182
AsiGI ACCGGT 2 cut(s) 295, 552
Asp718I GGTACC 5 cut(s) 427, 549, 1015, 1169, 2209
AspLEI GCGC 2 cut(s) 200, 456
AsuHPI GGTGA 4 cut(s) 964, 1282, 1801, 1961
AsuII TTCGAA 1 cut(s) 598
AvaI CYCGRG 5 cut(s) 442, 514, 758, 1269, 1406
AvaII GGWCC 4 cut(s) 222, 847, 1386, 1412
AxyI CCTNAGG 1 cut(s) 1712
BaeI ACNNNNGTAYC 6 cut(s) 259, 292, 895, 928, 1863, 1896
BalI TGGCCA 1 cut(s) 1732
BamHI GGATCC 2 cut(s) 43, 1474
BanI GGYRCC 7 cut(s) 83, 427, 549, 692, 1015, 1169, 2209
BanII GRGCYC 3 cut(s) 1091, 1690, 2186
BarI GAAGNNNNNNTAC 2 cut(s) 1832, 1864
BauI CACGAG 1 cut(s) 974
BbsI GAAGAC 2 cut(s) 99, 1540
Bbv12I GWGCWC 1 cut(s) 1091
BbvI GCAGC 3 cut(s) 967, 1079, 1552
BccI CCATC 5 cut(s) 380, 1465, 1493, 1814, 2215
BceAI ACGGC 3 cut(s) 71, 92, 2115
BcgI CGANNNNNNTGC 2 cut(s) 445, 479
BciVI GTATCC 2 cut(s) 835, 1864
BclI TGATCA 1 cut(s) 523
BcoDI GTCTC 4 cut(s) 165, 653, 858, 2114
BfaI CTAG 3 cut(s) 1416, 1505, 1530
BfmI CTRYAG 4 cut(s) 636, 1538, 1582, 1852
BfuAI ACCTGC 4 cut(s) 680, 799, 1845, 2197
BfuI GTATCC 2 cut(s) 835, 1864
BisI GCNGC 5 cut(s) 873, 981, 1068, 1541, 2061
BlpI GCTNAGC 1 cut(s) 1350
BlsI GCNGC 5 cut(s) 874, 982, 1069, 1542, 2062
BmcAI AGTACT 1 cut(s) 2157
Bme18I GGWCC 4 cut(s) 222, 847, 1386, 1412
BmeRI GACNNNNNGTC 1 cut(s) 1983
BmeT110I CYCGRG 5 cut(s) 442, 514, 758, 1269, 1406
BmgBI CACGTC 1 cut(s) 946
BmrI ACTGGG 1 cut(s) 1189
BmsI GCATC 5 cut(s) 562, 1079, 1367, 2193, 2226
BmuI ACTGGG 1 cut(s) 1189
BoxI GACNNNNGTC 1 cut(s) 645
BpiI GAAGAC 2 cut(s) 99, 1540
BplI GAGNNNNNCTC 2 cut(s) 1035, 1067
BpmI CTGGAG 1 cut(s) 877
Bpu10I CCTNAGC 1 cut(s) 1544
Bpu1102I GCTNAGC 1 cut(s) 1350
Bpu14I TTCGAA 1 cut(s) 598
BpuEI CTTGAG 1 cut(s) 2269
Bsa29I ATCGAT 1 cut(s) 534
BsaAI YACGTR 2 cut(s) 10, 1057
BsaBI GATNNNNATC 1 cut(s) 371
BsaI GGTCTC 2 cut(s) 653, 2114
BsaWI WCCGGW 6 cut(s) 163, 295, 552, 837, 1510, 1624
BsaXI ACNNNNNCTCC 2 cut(s) 1235, 1265
Bse118I RCCGGY 2 cut(s) 295, 552
Bse1I ACTGG 3 cut(s) 850, 1158, 1195
Bse21I CCTNAGG 1 cut(s) 1712
Bse3DI GCAATG 1 cut(s) 1594
Bse8I GATNNNNATC 1 cut(s) 371
BseCI ATCGAT 1 cut(s) 534
BseGI GGATG 4 cut(s) 206, 577, 1476, 1519
BseJI GATNNNNATC 1 cut(s) 371
BseMI GCAATG 1 cut(s) 1594
BseMII CTCAG 3 cut(s) 574, 1104, 2231
BseNI ACTGG 3 cut(s) 850, 1158, 1195
BseRI GAGGAG 2 cut(s) 632, 2266
BseXI GCAGC 3 cut(s) 967, 1079, 1552
BseYI CCCAGC 2 cut(s) 545, 1139
BsgI GTGCAG 2 cut(s) 827, 1178
Bsh1236I CGCG 2 cut(s) 200, 212
BshNI GGYRCC 7 cut(s) 83, 427, 549, 692, 1015, 1169, 2209
BshTI ACCGGT 2 cut(s) 295, 552
BshVI ATCGAT 1 cut(s) 534
BsiHKAI GWGCWC 1 cut(s) 1091
BsiHKCI CYCGRG 5 cut(s) 442, 514, 758, 1269, 1406
BslFI GGGAC 2 cut(s) 1399, 1425
BsmAI GTCTC 4 cut(s) 165, 653, 858, 2114
BsmFI GGGAC 2 cut(s) 1399, 1425
BsmI GAATGC 1 cut(s) 691
Bso31I GGTCTC 2 cut(s) 653, 2114
BsoBI CYCGRG 5 cut(s) 442, 514, 758, 1269, 1406
Bsp119I TTCGAA 1 cut(s) 598
Bsp1286I GDGCHC 3 cut(s) 1091, 1690, 2186
Bsp1720I GCTNAGC 1 cut(s) 1350
BspCNI CTCAG 3 cut(s) 573, 1103, 2230
BspDI ATCGAT 1 cut(s) 534
BspFNI CGCG 2 cut(s) 200, 212
BspHI TCATGA 1 cut(s) 1566
BspMAI CTGCAG 2 cut(s) 1542, 1856
BspMI ACCTGC 4 cut(s) 680, 799, 1845, 2197
BspPI GGATC 9 cut(s) 38, 51, 1461, 1469, 1482, 1702, 1942, 2152, 2197
BspT104I TTCGAA 1 cut(s) 598
BspT107I GGYRCC 7 cut(s) 83, 427, 549, 692, 1015, 1169, 2209
BspTNI GGTCTC 2 cut(s) 653, 2114
BsrBI CCGCTC 1 cut(s) 511
BsrDI GCAATG 1 cut(s) 1594
BsrFI RCCGGY 2 cut(s) 295, 552
BsrI ACTGG 3 cut(s) 850, 1158, 1195
BssAI RCCGGY 2 cut(s) 295, 552
BssSI CACGAG 1 cut(s) 974
BssT1I CCWWGG 3 cut(s) 988, 1263, 2046
Bst2BI CACGAG 1 cut(s) 974
Bst4CI ACNGT 5 cut(s) 139, 159, 1432, 1899, 1985
Bst6I CTCTTC 2 cut(s) 96, 2253
BstBAI YACGTR 2 cut(s) 10, 1057
BstBI TTCGAA 1 cut(s) 598
BstC8I GCNNGC 2 cut(s) 490, 1356
BstDEI CTNAG 8 cut(s) 272, 560, 1090, 1350, 1544, 1712, 1944, 2217
BstDSI CCRYGG 2 cut(s) 1812, 2112
BstEII GGTNACC 1 cut(s) 1673
BstENI CCTNNNNNAGG 1 cut(s) 1010
BstF5I GGATG 4 cut(s) 206, 577, 1476, 1519
BstFNI CGCG 2 cut(s) 200, 212
BstHHI GCGC 2 cut(s) 200, 456
BstMAI GTCTC 4 cut(s) 165, 653, 858, 2114
BstMWI GCNNNNNNNGC 6 cut(s) 118, 965, 1073, 1355, 1964, 2108
BstNSI RCATGY 4 cut(s) 238, 460, 492, 1249
BstPAI GACNNNNGTC 1 cut(s) 645
BstPI GGTNACC 1 cut(s) 1673
BstSFI CTRYAG 4 cut(s) 636, 1538, 1582, 1852
BstSNI TACGTA 1 cut(s) 1057
BstUI CGCG 2 cut(s) 200, 212
BstV1I GCAGC 3 cut(s) 967, 1079, 1552
BstV2I GAAGAC 2 cut(s) 99, 1540
BstX2I RGATCY 4 cut(s) 43, 1474, 1707, 1947
BstYI RGATCY 4 cut(s) 43, 1474, 1707, 1947
Bsu15I ATCGAT 1 cut(s) 534
Bsu36I CCTNAGG 1 cut(s) 1712
BsuI GTATCC 2 cut(s) 835, 1864
BsuTUI ATCGAT 1 cut(s) 534
BtgI CCRYGG 2 cut(s) 1812, 2112
BtrI CACGTC 1 cut(s) 946
BtsCI GGATG 4 cut(s) 206, 577, 1476, 1519
BtsIMutI CAGTG 1 cut(s) 1151
BveI ACCTGC 4 cut(s) 680, 799, 1845, 2197
Cac8I GCNNGC 2 cut(s) 490, 1356
CciI TCATGA 1 cut(s) 1566
CfoI GCGC 2 cut(s) 200, 456
Cfr10I RCCGGY 2 cut(s) 295, 552
Cfr9I CCCGGG 2 cut(s) 442, 1269
ClaI ATCGAT 1 cut(s) 534
CseI GACGC 1 cut(s) 1349
CsiI ACCWGGT 2 cut(s) 660, 1209
CspAI ACCGGT 2 cut(s) 295, 552
CspCI CAANNNNNGTGG 2 cut(s) 1760, 1795
DdeI CTNAG 8 cut(s) 272, 560, 1090, 1350, 1544, 1712, 1944, 2217
DraI TTTAAA 1 cut(s) 925
DriI GACNNNNNGTC 1 cut(s) 1983
EaeI YGGCCR 2 cut(s) 870, 1730
Eam1104I CTCTTC 2 cut(s) 96, 2253
Eam1105I GACNNNNNGTC 1 cut(s) 1983
EarI CTCTTC 2 cut(s) 96, 2253
Ecl136II GAGCTC 1 cut(s) 1089
Eco105I TACGTA 1 cut(s) 1057
Eco130I CCWWGG 3 cut(s) 988, 1263, 2046
Eco147I AGGCCT 1 cut(s) 1262
Eco24I GRGCYC 3 cut(s) 1091, 1690, 2186
Eco31I GGTCTC 2 cut(s) 653, 2114
Eco47I GGWCC 4 cut(s) 222, 847, 1386, 1412
Eco53kI GAGCTC 1 cut(s) 1089
Eco57I CTGAAG 1 cut(s) 1631
Eco81I CCTNAGG 1 cut(s) 1712
Eco88I CYCGRG 5 cut(s) 442, 514, 758, 1269, 1406
Eco91I GGTNACC 1 cut(s) 1673
EcoICRI GAGCTC 1 cut(s) 1089
EcoNI CCTNNNNNAGG 1 cut(s) 1010
EcoO109I RGGNCCY 2 cut(s) 315, 1412
EcoO65I GGTNACC 1 cut(s) 1673
EcoT14I CCWWGG 3 cut(s) 988, 1263, 2046
EcoT22I ATGCAT 2 cut(s) 577, 2279
EcoT38I GRGCYC 3 cut(s) 1091, 1690, 2186
ErhI CCWWGG 3 cut(s) 988, 1263, 2046
FaqI GGGAC 2 cut(s) 1399, 1425
FauI CCCGC 2 cut(s) 516, 575
FauNDI CATATG 1 cut(s) 2273
FbaI TGATCA 1 cut(s) 523
FblI GTMKAC 1 cut(s) 465
Fnu4HI GCNGC 5 cut(s) 873, 981, 1068, 1541, 2061
FokI GGATG 4 cut(s) 193, 584, 1483, 1526
FriOI GRGCYC 3 cut(s) 1091, 1690, 2186
Fsp4HI GCNGC 5 cut(s) 873, 981, 1068, 1541, 2061
FspBI CTAG 3 cut(s) 1416, 1505, 1530
GlaI GCGC 2 cut(s) 199, 455
GluI GCNGC 5 cut(s) 873, 981, 1068, 1541, 2061
GsaI CCCAGC 2 cut(s) 549, 1143
GsuI CTGGAG 1 cut(s) 877
HgaI GACGC 1 cut(s) 1349
HhaI GCGC 2 cut(s) 200, 456
Hin6I GCGC 2 cut(s) 198, 454
HinP1I GCGC 2 cut(s) 198, 454
HincII GTYRAC 2 cut(s) 466, 715
HindII GTYRAC 2 cut(s) 466, 715
HindIII AAGCTT 2 cut(s) 1461, 2033
HinfI GANTC 8 cut(s) 536, 595, 708, 885, 1109, 1162, 1190, 1863
HphI GGTGA 4 cut(s) 964, 1282, 1801, 1961
Hpy166II GTNNAC 7 cut(s) 466, 715, 912, 1207, 1290, 1560, 1895
Hpy188I TCNGA 6 cut(s) 118, 1114, 1438, 1862, 2149, 2220
Hpy8I GTNNAC 7 cut(s) 466, 715, 912, 1207, 1290, 1560, 1895
Hpy99I CGWCG 2 cut(s) 950, 1805
HpyAV CCTTC 6 cut(s) 170, 306, 328, 640, 1138, 1625
HpyCH4III ACNGT 5 cut(s) 139, 159, 1432, 1899, 1985
HpyCH4IV ACGT 4 cut(s) 9, 417, 945, 1056
HpyF10VI GCNNNNNNNGC 6 cut(s) 118, 965, 1073, 1355, 1964, 2108
HpyF3I CTNAG 8 cut(s) 272, 560, 1090, 1350, 1544, 1712, 1944, 2217
HpySE526I ACGT 4 cut(s) 9, 417, 945, 1056
HspAI GCGC 2 cut(s) 198, 454
KpnI GGTACC 5 cut(s) 431, 553, 1019, 1173, 2213
Ksp22I TGATCA 1 cut(s) 523
LmnI GCTCC 4 cut(s) 516, 619, 1685, 2253
Lsp1109I GCAGC 3 cut(s) 967, 1079, 1552
LweI GCATC 5 cut(s) 562, 1079, 1367, 2193, 2226
MabI ACCWGGT 2 cut(s) 660, 1209
MaeI CTAG 3 cut(s) 1416, 1505, 1530
MaeII ACGT 4 cut(s) 9, 417, 945, 1056
MaeIII GTNAC 9 cut(s) 391, 555, 1008, 1147, 1220, 1618, 1634, 1673, 1879
MbiI CCGCTC 1 cut(s) 511
MboII GAAGA 7 cut(s) 83, 104, 113, 1545, 1852, 2029, 2270
MfeI CAATTG 1 cut(s) 527
MflI RGATCY 4 cut(s) 43, 1474, 1707, 1947
MhlI GDGCHC 3 cut(s) 1091, 1690, 2186
MlsI TGGCCA 1 cut(s) 1732
MluCI AATT 6 cut(s) 519, 527, 783, 813, 926, 1479
MluNI TGGCCA 1 cut(s) 1732
MlyI GAGTC 4 cut(s) 702, 1103, 1171, 1872
MmeI TCCRAC 2 cut(s) 9, 1788
Mox20I TGGCCA 1 cut(s) 1732
Mph1103I ATGCAT 2 cut(s) 577, 2279
MscI TGGCCA 1 cut(s) 1732
MseI TTAA 3 cut(s) 182, 680, 924
MslI CAYNNNNRTG 3 cut(s) 1565, 1662, 2234
Msp20I TGGCCA 1 cut(s) 1732
MspA1I CMGCKG 3 cut(s) 545, 968, 1218
MunI CAATTG 1 cut(s) 527
Mva1269I GAATGC 1 cut(s) 691
MvnI CGCG 2 cut(s) 200, 212
MwoI GCNNNNNNNGC 6 cut(s) 118, 965, 1073, 1355, 1964, 2108
NdeI CATATG 1 cut(s) 2273
NmeAIII GCCGAG 2 cut(s) 174, 1917
NmuCI GTSAC 4 cut(s) 1008, 1618, 1634, 1879
NsiI ATGCAT 2 cut(s) 577, 2279
NspI RCATGY 4 cut(s) 238, 460, 492, 1249
NspV TTCGAA 1 cut(s) 598
OliI CACNNNNGTG 1 cut(s) 1662
PaeI GCATGC 1 cut(s) 492
PaeR7I CTCGAG 1 cut(s) 1406
PagI TCATGA 1 cut(s) 1566
PaqCI CACCTGC 1 cut(s) 680
PasI CCCWGGG 1 cut(s) 48
PceI AGGCCT 1 cut(s) 1262
PciI ACATGT 1 cut(s) 1245
PcsI WCGNNNNNNNCGW 3 cut(s) 1404, 1989, 2198
PctI GAATGC 1 cut(s) 691
PfeI GAWTC 4 cut(s) 536, 595, 885, 1190
PflMI CCANNNNNTGG 1 cut(s) 1264
PfoI TCCNGGA 4 cut(s) 126, 1039, 1866, 2070
PinAI ACCGGT 2 cut(s) 295, 552
PkrI GCNGC 5 cut(s) 874, 982, 1069, 1542, 2062
PleI GAGTC 4 cut(s) 702, 1103, 1170, 1871
PpsI GAGTC 4 cut(s) 702, 1103, 1170, 1871
Ppu21I YACGTR 2 cut(s) 10, 1057
PpuMI RGGWCCY 1 cut(s) 1412
PscI ACATGT 1 cut(s) 1245
PshAI GACNNNNGTC 1 cut(s) 645
PshBI ATTAAT 1 cut(s) 182
Psp124BI GAGCTC 1 cut(s) 1091
Psp5II RGGWCCY 1 cut(s) 1412
PspEI GGTNACC 1 cut(s) 1673
PspFI CCCAGC 2 cut(s) 545, 1139
PspPPI RGGWCCY 1 cut(s) 1412
PspXI VCTCGAGB 1 cut(s) 1406
PstI CTGCAG 2 cut(s) 1542, 1856
PsuI RGATCY 4 cut(s) 43, 1474, 1707, 1947
RseI CAYNNNNRTG 3 cut(s) 1565, 1662, 2234
SacI GAGCTC 1 cut(s) 1091
SalI GTCGAC 1 cut(s) 464
SaqAI TTAA 3 cut(s) 182, 680, 924
SatI GCNGC 5 cut(s) 873, 981, 1068, 1541, 2061
ScaI AGTACT 1 cut(s) 2157
SchI GAGTC 4 cut(s) 702, 1103, 1171, 1872
SduI GDGCHC 3 cut(s) 1091, 1690, 2186
SexAI ACCWGGT 2 cut(s) 660, 1209
SfaNI GCATC 5 cut(s) 562, 1079, 1367, 2193, 2226
SfcI CTRYAG 4 cut(s) 636, 1538, 1582, 1852
Sfr274I CTCGAG 1 cut(s) 1406
SfuI TTCGAA 1 cut(s) 598
SinI GGWCC 4 cut(s) 222, 847, 1386, 1412
SlaI CTCGAG 1 cut(s) 1406
SmaI CCCGGG 2 cut(s) 444, 1271
SmiMI CAYNNNNRTG 3 cut(s) 1565, 1662, 2234
SmlI CTYRAG 2 cut(s) 1406, 2248
SmoI CTYRAG 2 cut(s) 1406, 2248
SnaBI TACGTA 1 cut(s) 1057
SphI GCATGC 1 cut(s) 492
SrfI GCCCGGGC 1 cut(s) 1271
Sse9I AATT 6 cut(s) 519, 527, 783, 813, 926, 1479
SseBI AGGCCT 1 cut(s) 1262
SspI AATATT 1 cut(s) 1443
SspMI CTAG 3 cut(s) 1416, 1505, 1530
SstI GAGCTC 1 cut(s) 1091
StuI AGGCCT 1 cut(s) 1262
StyI CCWWGG 3 cut(s) 988, 1263, 2046
TaaI ACNGT 5 cut(s) 139, 159, 1432, 1899, 1985
TaiI ACGT 4 cut(s) 12, 420, 948, 1059
TasI AATT 6 cut(s) 519, 527, 783, 813, 926, 1479
TatI WGTACW 1 cut(s) 2155
TauI GCSGC 2 cut(s) 875, 2063
TfiI GAWTC 4 cut(s) 536, 595, 885, 1190
Tru1I TTAA 3 cut(s) 182, 680, 924
Tru9I TTAA 3 cut(s) 182, 680, 924
TscAI CASTG 1 cut(s) 1158
TseFI GTSAC 4 cut(s) 1008, 1618, 1634, 1879
TseI GCWGC 3 cut(s) 980, 1067, 1540
Tsp45I GTSAC 4 cut(s) 1008, 1618, 1634, 1879
TspDTI ATGAA 5 cut(s) 556, 617, 877, 1455, 1583
TspGWI ACGGA 4 cut(s) 917, 1664, 1829, 1898
TspMI CCCGGG 2 cut(s) 442, 1269
TspRI CASTG 1 cut(s) 1158
Van91I CCANNNNNTGG 1 cut(s) 1264
VpaK11BI GGWCC 4 cut(s) 222, 847, 1386, 1412
VspI ATTAAT 1 cut(s) 182
XagI CCTNNNNNAGG 1 cut(s) 1010
XceI RCATGY 4 cut(s) 238, 460, 492, 1249
XcmI CCANNNNNNNNNTGG 2 cut(s) 421, 1744
XhoI CTCGAG 1 cut(s) 1406
XmaI CCCGGG 2 cut(s) 442, 1269
XmiI GTMKAC 1 cut(s) 465
XspI CTAG 3 cut(s) 1416, 1505, 1530
ZrmI AGTACT 1 cut(s) 2157
Zsp2I ATGCAT 2 cut(s) 577, 2279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.