Uncharacterized protein K02A2.6-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 143 - 248 | 1.4e-19 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| RT_RNaseH_2 | PF17919 | 322 - 394 | 1.5e-10 | RNase H-like domain found in reverse transcriptase |
| RVT_3 | PF13456 | 392 - 448 | 2.7e-06 | Reverse transcriptase-like |
| rve | PF00665 | 585 - 664 | 1.3e-09 | Integrase core domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 680 |
| Acc36I | ACCTGC | 2 cut(s) | 680, 1863 |
| Acc65I | GGTACC | 3 cut(s) | 427, 549, 1018 |
| AccB1I | GGYRCC | 6 cut(s) | 83, 427, 549, 692, 1018, 1910 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1249 |
| AccBSI | CCGCTC | 1 cut(s) | 511 |
| AccI | GTMKAC | 1 cut(s) | 465 |
| AccII | CGCG | 3 cut(s) | 212, 517, 1394 |
| AclWI | GGATC | 6 cut(s) | 38, 51, 1446, 1960, 2170, 2216 |
| AcoI | YGGCCR | 2 cut(s) | 873, 1715 |
| AcuI | CTGAAG | 1 cut(s) | 1616 |
| AcyI | GRCGYC | 1 cut(s) | 1326 |
| AflIII | ACRYGT | 2 cut(s) | 946, 1230 |
| AgeI | ACCGGT | 2 cut(s) | 295, 552 |
| AgsI | TTSAA | 6 cut(s) | 101, 928, 1000, 1471, 1762, 2186 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2001 |
| AjiI | CACGTC | 1 cut(s) | 949 |
| AjnI | CCWGG | 9 cut(s) | 47, 63, 345, 660, 896, 962, 1194, 1242, 1731 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2269, 2301 |
| AleI | CACNNNNGTG | 1 cut(s) | 1647 |
| Alw21I | GWGCWC | 4 cut(s) | 624, 978, 1094, 1675 |
| Alw26I | GTCTC | 3 cut(s) | 165, 653, 2132 |
| AlwI | GGATC | 6 cut(s) | 38, 51, 1446, 1960, 2170, 2216 |
| Ama87I | CYCGRG | 4 cut(s) | 239, 758, 1254, 2267 |
| ApeKI | GCWGC | 3 cut(s) | 983, 1070, 1525 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2185, 2217 |
| AseI | ATTAAT | 1 cut(s) | 182 |
| AsiGI | ACCGGT | 2 cut(s) | 295, 552 |
| Asp718I | GGTACC | 3 cut(s) | 427, 549, 1018 |
| AspLEI | GCGC | 1 cut(s) | 456 |
| AsuHPI | GGTGA | 5 cut(s) | 967, 1267, 1819, 1979, 2147 |
| AsuII | TTCGAA | 1 cut(s) | 598 |
| AvaI | CYCGRG | 4 cut(s) | 239, 758, 1254, 2267 |
| AvaII | GGWCC | 5 cut(s) | 222, 850, 1371, 1397, 1459 |
| AxyI | CCTNAGG | 1 cut(s) | 1697 |
| BalI | TGGCCA | 1 cut(s) | 1717 |
| BamHI | GGATCC | 1 cut(s) | 43 |
| BanI | GGYRCC | 6 cut(s) | 83, 427, 549, 692, 1018, 1910 |
| BanII | GRGCYC | 3 cut(s) | 1094, 1227, 1675 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1850, 1882 |
| BauI | CACGAG | 1 cut(s) | 977 |
| BbsI | GAAGAC | 2 cut(s) | 99, 1525 |
| Bbv12I | GWGCWC | 4 cut(s) | 624, 978, 1094, 1675 |
| BbvI | GCAGC | 3 cut(s) | 970, 1082, 1537 |
| BccI | CCATC | 5 cut(s) | 380, 1450, 1478, 1832, 2234 |
| BceAI | ACGGC | 4 cut(s) | 71, 92, 1763, 2133 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 445, 479, 1900, 1934, 2233, 2267 |
| BciT130I | CCWGG | 9 cut(s) | 49, 65, 347, 662, 898, 964, 1196, 1244, 1733 |
| BciVI | GTATCC | 2 cut(s) | 237, 838 |
| BclI | TGATCA | 1 cut(s) | 523 |
| BcoDI | GTCTC | 3 cut(s) | 165, 653, 2132 |
| BfaI | CTAG | 2 cut(s) | 1401, 1490 |
| BfmI | CTRYAG | 4 cut(s) | 636, 1366, 1567, 1870 |
| BfuAI | ACCTGC | 2 cut(s) | 680, 1863 |
| BfuI | GTATCC | 2 cut(s) | 237, 838 |
| BisI | GCNGC | 5 cut(s) | 876, 984, 1071, 1526, 2079 |
| BlpI | GCTNAGC | 1 cut(s) | 1335 |
| BlsI | GCNGC | 5 cut(s) | 877, 985, 1072, 1527, 2080 |
| BmcAI | AGTACT | 1 cut(s) | 2175 |
| Bme18I | GGWCC | 5 cut(s) | 222, 850, 1371, 1397, 1459 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2001 |
| BmeT110I | CYCGRG | 4 cut(s) | 239, 758, 1254, 2267 |
| BmgBI | CACGTC | 1 cut(s) | 949 |
| BmrI | ACTGGG | 3 cut(s) | 1124, 1174, 1909 |
| BmsI | GCATC | 4 cut(s) | 562, 1082, 1352, 2212 |
| BmuI | ACTGGG | 3 cut(s) | 1124, 1174, 1909 |
| BoxI | GACNNNNGTC | 1 cut(s) | 645 |
| BpiI | GAAGAC | 2 cut(s) | 99, 1525 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1038, 1070 |
| BpmI | CTGGAG | 1 cut(s) | 880 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1529 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1335 |
| Bpu14I | TTCGAA | 1 cut(s) | 598 |
| BsaAI | YACGTR | 2 cut(s) | 10, 1060 |
| BsaBI | GATNNNNATC | 1 cut(s) | 371 |
| BsaHI | GRCGYC | 1 cut(s) | 1326 |
| BsaI | GGTCTC | 2 cut(s) | 653, 2132 |
| BsaWI | WCCGGW | 4 cut(s) | 295, 552, 840, 1495 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1220, 1250 |
| Bse118I | RCCGGY | 2 cut(s) | 295, 552 |
| Bse1I | ACTGG | 4 cut(s) | 1130, 1162, 1180, 1915 |
| Bse21I | CCTNAGG | 1 cut(s) | 1697 |
| Bse3DI | GCAATG | 1 cut(s) | 1579 |
| Bse8I | GATNNNNATC | 1 cut(s) | 371 |
| BseBI | CCWGG | 9 cut(s) | 49, 65, 347, 662, 898, 964, 1196, 1244, 1733 |
| BseGI | GGATG | 4 cut(s) | 206, 577, 1461, 1504 |
| BseJI | GATNNNNATC | 1 cut(s) | 371 |
| BseMI | GCAATG | 1 cut(s) | 1579 |
| BseMII | CTCAG | 4 cut(s) | 38, 574, 1107, 2250 |
| BseNI | ACTGG | 4 cut(s) | 1130, 1162, 1180, 1915 |
| BseRI | GAGGAG | 1 cut(s) | 632 |
| BseXI | GCAGC | 3 cut(s) | 970, 1082, 1537 |
| BseYI | CCCAGC | 1 cut(s) | 1142 |
| BsgI | GTGCAG | 2 cut(s) | 827, 1182 |
| Bsh1236I | CGCG | 3 cut(s) | 212, 517, 1394 |
| BshNI | GGYRCC | 6 cut(s) | 83, 427, 549, 692, 1018, 1910 |
| BshTI | ACCGGT | 2 cut(s) | 295, 552 |
| BsiHKAI | GWGCWC | 4 cut(s) | 624, 978, 1094, 1675 |
| BsiHKCI | CYCGRG | 4 cut(s) | 239, 758, 1254, 2267 |
| BslFI | GGGAC | 4 cut(s) | 1410, 1767, 1868, 2187 |
| BsmAI | GTCTC | 3 cut(s) | 165, 653, 2132 |
| BsmFI | GGGAC | 4 cut(s) | 1410, 1767, 1868, 2187 |
| BsmI | GAATGC | 1 cut(s) | 691 |
| Bso31I | GGTCTC | 2 cut(s) | 653, 2132 |
| BsoBI | CYCGRG | 4 cut(s) | 239, 758, 1254, 2267 |
| Bsp119I | TTCGAA | 1 cut(s) | 598 |
| Bsp1286I | GDGCHC | 5 cut(s) | 624, 978, 1094, 1227, 1675 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1335 |
| Bsp19I | CCATGG | 1 cut(s) | 1749 |
| BspCNI | CTCAG | 4 cut(s) | 37, 573, 1106, 2249 |
| BspFNI | CGCG | 3 cut(s) | 212, 517, 1394 |
| BspHI | TCATGA | 1 cut(s) | 1551 |
| BspMAI | CTGCAG | 1 cut(s) | 1874 |
| BspMI | ACCTGC | 2 cut(s) | 680, 1863 |
| BspPI | GGATC | 6 cut(s) | 38, 51, 1446, 1960, 2170, 2216 |
| BspT104I | TTCGAA | 1 cut(s) | 598 |
| BspT107I | GGYRCC | 6 cut(s) | 83, 427, 549, 692, 1018, 1910 |
| BspTNI | GGTCTC | 2 cut(s) | 653, 2132 |
| BsrBI | CCGCTC | 1 cut(s) | 511 |
| BsrDI | GCAATG | 1 cut(s) | 1579 |
| BsrFI | RCCGGY | 2 cut(s) | 295, 552 |
| BsrI | ACTGG | 4 cut(s) | 1130, 1162, 1180, 1915 |
| BssAI | RCCGGY | 2 cut(s) | 295, 552 |
| BssNI | GRCGYC | 1 cut(s) | 1326 |
| BssSI | CACGAG | 1 cut(s) | 977 |
| BssT1I | CCWWGG | 5 cut(s) | 991, 1248, 1301, 1749, 2064 |
| Bst2BI | CACGAG | 1 cut(s) | 977 |
| Bst2UI | CCWGG | 9 cut(s) | 49, 65, 347, 662, 898, 964, 1196, 1244, 1733 |
| Bst4CI | ACNGT | 4 cut(s) | 139, 1417, 1758, 2003 |
| Bst6I | CTCTTC | 3 cut(s) | 96, 1567, 2272 |
| BstACI | GRCGYC | 1 cut(s) | 1326 |
| BstBAI | YACGTR | 2 cut(s) | 10, 1060 |
| BstBI | TTCGAA | 1 cut(s) | 598 |
| BstC8I | GCNNGC | 3 cut(s) | 490, 810, 1341 |
| BstDEI | CTNAG | 9 cut(s) | 24, 272, 560, 1093, 1335, 1529, 1697, 1962, 2236 |
| BstDSI | CCRYGG | 5 cut(s) | 1749, 1779, 1830, 2115, 2130 |
| BstEII | GGTNACC | 1 cut(s) | 1658 |
| BstF5I | GGATG | 4 cut(s) | 206, 577, 1461, 1504 |
| BstFNI | CGCG | 3 cut(s) | 212, 517, 1394 |
| BstHHI | GCGC | 1 cut(s) | 456 |
| BstMAI | GTCTC | 3 cut(s) | 165, 653, 2132 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 118, 968, 1076, 1340, 1775, 1982, 2126 |
| BstNI | CCWGG | 9 cut(s) | 49, 65, 347, 662, 898, 964, 1196, 1244, 1733 |
| BstNSI | RCATGY | 4 cut(s) | 238, 460, 492, 1234 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 645 |
| BstPI | GGTNACC | 1 cut(s) | 1658 |
| BstSFI | CTRYAG | 4 cut(s) | 636, 1366, 1567, 1870 |
| BstSNI | TACGTA | 1 cut(s) | 1060 |
| BstUI | CGCG | 3 cut(s) | 212, 517, 1394 |
| BstV1I | GCAGC | 3 cut(s) | 970, 1082, 1537 |
| BstV2I | GAAGAC | 2 cut(s) | 99, 1525 |
| BstX2I | RGATCY | 2 cut(s) | 43, 1965 |
| BstYI | RGATCY | 2 cut(s) | 43, 1965 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1697 |
| BsuI | GTATCC | 2 cut(s) | 237, 838 |
| BtgI | CCRYGG | 5 cut(s) | 1749, 1779, 1830, 2115, 2130 |
| BtrI | CACGTC | 1 cut(s) | 949 |
| BtsCI | GGATG | 4 cut(s) | 206, 577, 1461, 1504 |
| BtsIMutI | CAGTG | 2 cut(s) | 1137, 1155 |
| BveI | ACCTGC | 2 cut(s) | 680, 1863 |
| Cac8I | GCNNGC | 3 cut(s) | 490, 810, 1341 |
| CciI | TCATGA | 1 cut(s) | 1551 |
| CfoI | GCGC | 1 cut(s) | 456 |
| Cfr10I | RCCGGY | 2 cut(s) | 295, 552 |
| Cfr9I | CCCGGG | 2 cut(s) | 239, 1254 |
| CseI | GACGC | 1 cut(s) | 1334 |
| CsiI | ACCWGGT | 2 cut(s) | 660, 1194 |
| CspAI | ACCGGT | 2 cut(s) | 295, 552 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1778, 1813 |
| DdeI | CTNAG | 9 cut(s) | 24, 272, 560, 1093, 1335, 1529, 1697, 1962, 2236 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2001 |
| EaeI | YGGCCR | 2 cut(s) | 873, 1715 |
| Eam1104I | CTCTTC | 3 cut(s) | 96, 1567, 2272 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2001 |
| EarI | CTCTTC | 3 cut(s) | 96, 1567, 2272 |
| Ecl136II | GAGCTC | 2 cut(s) | 1092, 1673 |
| Eco105I | TACGTA | 1 cut(s) | 1060 |
| Eco130I | CCWWGG | 5 cut(s) | 991, 1248, 1301, 1749, 2064 |
| Eco147I | AGGCCT | 1 cut(s) | 1247 |
| Eco24I | GRGCYC | 3 cut(s) | 1094, 1227, 1675 |
| Eco31I | GGTCTC | 2 cut(s) | 653, 2132 |
| Eco47I | GGWCC | 5 cut(s) | 222, 850, 1371, 1397, 1459 |
| Eco53kI | GAGCTC | 2 cut(s) | 1092, 1673 |
| Eco57I | CTGAAG | 1 cut(s) | 1616 |
| Eco81I | CCTNAGG | 1 cut(s) | 1697 |
| Eco88I | CYCGRG | 4 cut(s) | 239, 758, 1254, 2267 |
| Eco91I | GGTNACC | 1 cut(s) | 1658 |
| EcoICRI | GAGCTC | 2 cut(s) | 1092, 1673 |
| EcoO109I | RGGNCCY | 2 cut(s) | 315, 1397 |
| EcoO65I | GGTNACC | 1 cut(s) | 1658 |
| EcoRII | CCWGG | 9 cut(s) | 47, 63, 345, 660, 896, 962, 1194, 1242, 1731 |
| EcoT14I | CCWWGG | 5 cut(s) | 991, 1248, 1301, 1749, 2064 |
| EcoT22I | ATGCAT | 1 cut(s) | 577 |
| EcoT38I | GRGCYC | 3 cut(s) | 1094, 1227, 1675 |
| ErhI | CCWWGG | 5 cut(s) | 991, 1248, 1301, 1749, 2064 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 992, 1024, 2269, 2301 |
| FaqI | GGGAC | 4 cut(s) | 1410, 1767, 1868, 2187 |
| FauI | CCCGC | 4 cut(s) | 516, 522, 575, 1387 |
| FbaI | TGATCA | 1 cut(s) | 523 |
| FblI | GTMKAC | 1 cut(s) | 465 |
| Fnu4HI | GCNGC | 5 cut(s) | 876, 984, 1071, 1526, 2079 |
| FokI | GGATG | 4 cut(s) | 193, 584, 1468, 1511 |
| FriOI | GRGCYC | 3 cut(s) | 1094, 1227, 1675 |
| Fsp4HI | GCNGC | 5 cut(s) | 876, 984, 1071, 1526, 2079 |
| FspBI | CTAG | 2 cut(s) | 1401, 1490 |
| GlaI | GCGC | 1 cut(s) | 455 |
| GluI | GCNGC | 5 cut(s) | 876, 984, 1071, 1526, 2079 |
| GsaI | CCCAGC | 1 cut(s) | 1146 |
| GsuI | CTGGAG | 1 cut(s) | 880 |
| HgaI | GACGC | 1 cut(s) | 1334 |
| HhaI | GCGC | 1 cut(s) | 456 |
| Hin1I | GRCGYC | 1 cut(s) | 1326 |
| Hin6I | GCGC | 1 cut(s) | 454 |
| HinP1I | GCGC | 1 cut(s) | 454 |
| HincII | GTYRAC | 3 cut(s) | 466, 715, 2020 |
| HindII | GTYRAC | 3 cut(s) | 466, 715, 2020 |
| HindIII | AAGCTT | 3 cut(s) | 1337, 2051, 2283 |
| HinfI | GANTC | 8 cut(s) | 536, 595, 888, 1112, 1166, 1175, 1881, 2200 |
| HphI | GGTGA | 5 cut(s) | 967, 1267, 1819, 1979, 2147 |
| Hpy166II | GTNNAC | 9 cut(s) | 232, 466, 715, 915, 1135, 1192, 1275, 1783, 2020 |
| Hpy188I | TCNGA | 7 cut(s) | 118, 1117, 1269, 1423, 2111, 2167, 2239 |
| Hpy188III | TCNNGA | 8 cut(s) | 797, 885, 1099, 1552, 1843, 1885, 2032, 2197 |
| Hpy8I | GTNNAC | 9 cut(s) | 232, 466, 715, 915, 1135, 1192, 1275, 1783, 2020 |
| Hpy99I | CGWCG | 2 cut(s) | 953, 1823 |
| HpyAV | CCTTC | 7 cut(s) | 170, 306, 328, 640, 1102, 1606, 1610 |
| HpyCH4III | ACNGT | 4 cut(s) | 139, 1417, 1758, 2003 |
| HpyCH4IV | ACGT | 5 cut(s) | 9, 417, 948, 1059, 1284 |
| HpyCH4V | TGCA | 9 cut(s) | 7, 575, 689, 808, 1163, 1343, 1685, 1872, 2151 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 118, 968, 1076, 1340, 1775, 1982, 2126 |
| HpyF3I | CTNAG | 9 cut(s) | 24, 272, 560, 1093, 1335, 1529, 1697, 1962, 2236 |
| HpySE526I | ACGT | 5 cut(s) | 9, 417, 948, 1059, 1284 |
| Hsp92I | GRCGYC | 1 cut(s) | 1326 |
| HspAI | GCGC | 1 cut(s) | 454 |
| KpnI | GGTACC | 3 cut(s) | 431, 553, 1022 |
| Ksp22I | TGATCA | 1 cut(s) | 523 |
| LmnI | GCTCC | 5 cut(s) | 516, 619, 973, 1222, 1670 |
| Lsp1109I | GCAGC | 3 cut(s) | 970, 1082, 1537 |
| LweI | GCATC | 4 cut(s) | 562, 1082, 1352, 2212 |
| MabI | ACCWGGT | 2 cut(s) | 660, 1194 |
| MaeI | CTAG | 2 cut(s) | 1401, 1490 |
| MaeII | ACGT | 5 cut(s) | 9, 417, 948, 1059, 1284 |
| MaeIII | GTNAC | 9 cut(s) | 391, 555, 1011, 1151, 1205, 1603, 1619, 1658, 1897 |
| MbiI | CCGCTC | 1 cut(s) | 511 |
| MboII | GAAGA | 8 cut(s) | 83, 104, 113, 916, 1530, 1584, 1870, 2289 |
| MfeI | CAATTG | 1 cut(s) | 527 |
| MflI | RGATCY | 2 cut(s) | 43, 1965 |
| MhlI | GDGCHC | 5 cut(s) | 624, 978, 1094, 1227, 1675 |
| MlsI | TGGCCA | 1 cut(s) | 1717 |
| MluCI | AATT | 4 cut(s) | 519, 527, 783, 1464 |
| MluNI | TGGCCA | 1 cut(s) | 1717 |
| MlyI | GAGTC | 5 cut(s) | 530, 1106, 1175, 1890, 2209 |
| MmeI | TCCRAC | 1 cut(s) | 9 |
| Mox20I | TGGCCA | 1 cut(s) | 1717 |
| Mph1103I | ATGCAT | 1 cut(s) | 577 |
| MscI | TGGCCA | 1 cut(s) | 1717 |
| MseI | TTAA | 2 cut(s) | 182, 680 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1550, 1647 |
| Msp20I | TGGCCA | 1 cut(s) | 1717 |
| MspA1I | CMGCKG | 2 cut(s) | 971, 1203 |
| MunI | CAATTG | 1 cut(s) | 527 |
| Mva1269I | GAATGC | 1 cut(s) | 691 |
| MvaI | CCWGG | 9 cut(s) | 49, 65, 347, 662, 898, 964, 1196, 1244, 1733 |
| MvnI | CGCG | 3 cut(s) | 212, 517, 1394 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 118, 968, 1076, 1340, 1775, 1982, 2126 |
| NcoI | CCATGG | 1 cut(s) | 1749 |
| NmeAIII | GCCGAG | 1 cut(s) | 1935 |
| NmuCI | GTSAC | 4 cut(s) | 1011, 1603, 1619, 1897 |
| NsiI | ATGCAT | 1 cut(s) | 577 |
| NspI | RCATGY | 4 cut(s) | 238, 460, 492, 1234 |
| NspV | TTCGAA | 1 cut(s) | 598 |
| OliI | CACNNNNGTG | 1 cut(s) | 1647 |
| PaeI | GCATGC | 1 cut(s) | 492 |
| PaeR7I | CTCGAG | 1 cut(s) | 2267 |
| PagI | TCATGA | 1 cut(s) | 1551 |
| PaqCI | CACCTGC | 1 cut(s) | 680 |
| PasI | CCCWGGG | 1 cut(s) | 48 |
| PceI | AGGCCT | 1 cut(s) | 1247 |
| PciI | ACATGT | 1 cut(s) | 1230 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 2007, 2217 |
| PctI | GAATGC | 1 cut(s) | 691 |
| PfeI | GAWTC | 3 cut(s) | 595, 888, 1175 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1249 |
| PfoI | TCCNGGA | 4 cut(s) | 126, 442, 1042, 2088 |
| PinAI | ACCGGT | 2 cut(s) | 295, 552 |
| PkrI | GCNGC | 5 cut(s) | 877, 985, 1072, 1527, 2080 |
| PleI | GAGTC | 5 cut(s) | 530, 1106, 1174, 1889, 2208 |
| PpsI | GAGTC | 5 cut(s) | 530, 1106, 1174, 1889, 2208 |
| Ppu21I | YACGTR | 2 cut(s) | 10, 1060 |
| PpuMI | RGGWCCY | 1 cut(s) | 1397 |
| PscI | ACATGT | 1 cut(s) | 1230 |
| PshAI | GACNNNNGTC | 1 cut(s) | 645 |
| PshBI | ATTAAT | 1 cut(s) | 182 |
| Psp124BI | GAGCTC | 2 cut(s) | 1094, 1675 |
| Psp5II | RGGWCCY | 1 cut(s) | 1397 |
| Psp6I | CCWGG | 9 cut(s) | 47, 63, 345, 660, 896, 962, 1194, 1242, 1731 |
| PspEI | GGTNACC | 1 cut(s) | 1658 |
| PspFI | CCCAGC | 1 cut(s) | 1142 |
| PspGI | CCWGG | 9 cut(s) | 47, 63, 345, 660, 896, 962, 1194, 1242, 1731 |
| PspPPI | RGGWCCY | 1 cut(s) | 1397 |
| PspXI | VCTCGAGB | 1 cut(s) | 2267 |
| PstI | CTGCAG | 1 cut(s) | 1874 |
| PsuI | RGATCY | 2 cut(s) | 43, 1965 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1550, 1647 |
| SacI | GAGCTC | 2 cut(s) | 1094, 1675 |
| SalI | GTCGAC | 1 cut(s) | 464 |
| SaqAI | TTAA | 2 cut(s) | 182, 680 |
| SatI | GCNGC | 5 cut(s) | 876, 984, 1071, 1526, 2079 |
| ScaI | AGTACT | 1 cut(s) | 2175 |
| SchI | GAGTC | 5 cut(s) | 530, 1106, 1175, 1890, 2209 |
| SduI | GDGCHC | 5 cut(s) | 624, 978, 1094, 1227, 1675 |
| SexAI | ACCWGGT | 2 cut(s) | 660, 1194 |
| SfaNI | GCATC | 4 cut(s) | 562, 1082, 1352, 2212 |
| SfcI | CTRYAG | 4 cut(s) | 636, 1366, 1567, 1870 |
| Sfr274I | CTCGAG | 1 cut(s) | 2267 |
| SfuI | TTCGAA | 1 cut(s) | 598 |
| SinI | GGWCC | 5 cut(s) | 222, 850, 1371, 1397, 1459 |
| SlaI | CTCGAG | 1 cut(s) | 2267 |
| SmaI | CCCGGG | 2 cut(s) | 241, 1256 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1550, 1647 |
| SmlI | CTYRAG | 1 cut(s) | 2267 |
| SmoI | CTYRAG | 1 cut(s) | 2267 |
| SnaBI | TACGTA | 1 cut(s) | 1060 |
| SphI | GCATGC | 1 cut(s) | 492 |
| SrfI | GCCCGGGC | 1 cut(s) | 1256 |
| Sse9I | AATT | 4 cut(s) | 519, 527, 783, 1464 |
| SseBI | AGGCCT | 1 cut(s) | 1247 |
| SspI | AATATT | 1 cut(s) | 1428 |
| SspMI | CTAG | 2 cut(s) | 1401, 1490 |
| SstI | GAGCTC | 2 cut(s) | 1094, 1675 |
| StuI | AGGCCT | 1 cut(s) | 1247 |
| StyI | CCWWGG | 5 cut(s) | 991, 1248, 1301, 1749, 2064 |
| TaaI | ACNGT | 4 cut(s) | 139, 1417, 1758, 2003 |
| TaiI | ACGT | 5 cut(s) | 12, 420, 951, 1062, 1287 |
| TasI | AATT | 4 cut(s) | 519, 527, 783, 1464 |
| TatI | WGTACW | 3 cut(s) | 914, 1134, 2173 |
| TauI | GCSGC | 2 cut(s) | 878, 2081 |
| TfiI | GAWTC | 3 cut(s) | 595, 888, 1175 |
| Tru1I | TTAA | 2 cut(s) | 182, 680 |
| Tru9I | TTAA | 2 cut(s) | 182, 680 |
| TscAI | CASTG | 2 cut(s) | 1137, 1162 |
| TseFI | GTSAC | 4 cut(s) | 1011, 1603, 1619, 1897 |
| TseI | GCWGC | 3 cut(s) | 983, 1070, 1525 |
| Tsp45I | GTSAC | 4 cut(s) | 1011, 1603, 1619, 1897 |
| TspDTI | ATGAA | 5 cut(s) | 556, 617, 880, 1440, 1568 |
| TspGWI | ACGGA | 6 cut(s) | 920, 1649, 1847, 1916, 1963, 2138 |
| TspMI | CCCGGG | 2 cut(s) | 239, 1254 |
| TspRI | CASTG | 2 cut(s) | 1137, 1162 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1249 |
| VpaK11BI | GGWCC | 5 cut(s) | 222, 850, 1371, 1397, 1459 |
| VspI | ATTAAT | 1 cut(s) | 182 |
| XceI | RCATGY | 4 cut(s) | 238, 460, 492, 1234 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 421, 1729, 1777 |
| XhoI | CTCGAG | 1 cut(s) | 2267 |
| XmaI | CCCGGG | 2 cut(s) | 239, 1254 |
| XmiI | GTMKAC | 1 cut(s) | 465 |
| XspI | CTAG | 2 cut(s) | 1401, 1490 |
| ZrmI | AGTACT | 1 cut(s) | 2175 |
| Zsp2I | ATGCAT | 1 cut(s) | 577 |