Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000250

Physical Location & Seq

Genomic Coordinates Reverse (-)

12193178 .. 12194311

Gene Structure 1134 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g18432.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1134 bp

ATGAAAGTTGTGGGAGAGTCTTCTGAGCTCACGCCTATGAAGATTGTGGGAGAGTCCTCTGAGCCCGCTCCCATAAAAGTTGTGGGAGTATCCTCTGAGATCGGCCGGGAGGAAAGCGGCCCCAGAGCGGATAAGGGGATGCACAATGAAGAACCGCCGGCTCAACTCTGGAGGCTTTTTGTTGACGGCTCGATGACGAGAAATAAAAGCAGGGCGGGAATAATATTAGAGACTCCTGTTGGATTCAAACATGAGTACGCATTGGAATTCCAGTTTAAGGCATCAAACAATGGGGTTGAGTATGAAGCTTTAATAGGGGGATTGCAACTTGCCCGAGACATCGGCGTGGAGAGAGTGGAAGTGTTCAGTGATTCGCAATTGGTTGTAAATCAAGTCAACGGGAGTTTCGAAGCTAAGGAGCCTCAGTTGCACTCTTACCAAGCGTTATCAAACGCCTTTATGCAACGTTTCAAGTCGGCATCTCTCTCTCACATCCCCCAGAAGGAAAACACTAATACAGATGCCCTCGCCCGGCTAGCCACCGGAGGGCCTGGGAAAGGCAGAAAGAAGGCAAGAATTGAGGTGCTAGGAAAACTGAGTATCAGTAAAACAATCTCGGAGATATTCATGGTCGAAGCGGGACCTAGAGAGCCTACGTGGATGGACCCCATAATCAAGTTTATGAAGGAGGGGGTGTGCCCGGAGGCCAGGCGGCATGCACGAAAGTTACAATCGAGATGTTCTAGGTACACCCTCATGAACGGGAAGCTATACCGCAGAGGTTACAATTTTCTAAACCTCAAGTGCGTGACAGAGGAAGAAGGAAAAGTGATCACAAGAGAAATTCATGAAGGGGTGTGCGGGAATCACTCTGGATCCCGGTCGTTAGCACACAAGGCACTACGCATAGGGTTTTTCTGGCCCAACATGGGCGCCATGGCAGATAACATGTCGGCGAGATGCCGTAAATGCCATTTGCACGCTAACGGGATACATTCCACTTCTATTGCTCTGTCAATCTTATTATCGCCCTGGCCTTTTGCACAGTGGGGCTTTGACCTCATCGAGATACTGCCAACGGCACCTGGGCAGTTAAAGTATGTGGCAGTTAAAGTACATGATAGTGGCTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000943 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0003887 GO:0003964 GO:0004518 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006278 GO:0006508 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009058 GO:0009059 GO:0009987 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0016787 GO:0016788 GO:0018130 GO:0019438 GO:0019538 GO:0032196 GO:0032197 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071897 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0140096 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RVT_1 RVT_3 rve

Protein Analysis

378

Amino Acids

41.75

Weight (kDa)

9.14

Isoelectric Point (pI)

40.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_H	PF00075	59 - 139	6.3e-07	RNase H
RVT_3	PF13456	61 - 179	1.7e-20	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000250)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g22373 FvH4_1g22374 FvH4_1g25831 FvH4_1g28031 FvH4_2g11354 FvH4_3g11301 FvH4_3g11302 FvH4_3g14364 FvH4_3g20862 FvH4_4g15482 FvH4_4g15483 FvH4_4g15484 FvH4_5g25502 FvH4_5g37242 FvH4_6g18432 FvH4_6g18433 FvH4_6g20952 FvH4_7g02201 FvH4_7g10991
prunus_persica	Prupe.6G166700_v2.0.a1
pyrus_communis	pycom01g03860 pycom02g16130 pycom05g08340 pycom07g08280 pycom16g20980 pycom16g25810
rosa_chinensis	RchiOBHm_Chr5g0018261
rosa_laevigata	RLG00000022447
rosa_multiflora	Rmu_co7963284.1_g000001 Rmu_co7968088.1_g000001 Rmu_co8036800.1_g000001 Rmu_co8110294.1_g000001 Rmu_co8291955.1_g000001 Rmu_co8396209.1_g000002 Rmu_co8413879.1_g000001 Rmu_co8464165.1_g000001 Rmu_co8469565.1_g000001 Rmu_co8485695.1_g000003 Rmu_co8486821.1_g000003 Rmu_co8515379.1_g000001 Rmu_sc0000239.1_g000074 Rmu_sc0000327.1_g000028 Rmu_sc0000509.1_g000002 Rmu_sc0000677.1_g000042 Rmu_sc0000756.1_g000032 Rmu_sc0000782.1_g000013 Rmu_sc0001144.1_g000044 Rmu_sc0001861.1_g000003 Rmu_sc0002371.1_g000016 Rmu_sc0002451.1_g000061 Rmu_sc0002764.1_g000053 Rmu_sc0002868.1_g000041 Rmu_sc0003735.1_g000026 Rmu_sc0004654.1_g000006 Rmu_sc0005038.1_g000020 Rmu_sc0005236.1_g000001 Rmu_sc0006725.1_g000004 Rmu_sc0010685.1_g000001 Rmu_sc0011973.1_g000010 Rmu_sc0012722.1_g000001 Rmu_sc0015925.1_g000002 Rmu_sc0017188.1_g000001 Rmu_sc0021806.1_g000001 Rmu_sc0033125.1_g000001 Rmu_sc0038204.1_g000001 Rmu_ssc0000215.1_g000038
rosa_roxburghii	Rroxscaffold_1G00001020 Rroxscaffold_1G00027520 Rroxscaffold_3G00228140 Rroxscaffold_4G00320850 Rroxscaffold_4G00321830 Rroxscaffold_4G00321840 Rroxscaffold_4G00332450 Rroxscaffold_5G00344360 Rroxscaffold_5G00365190 Rroxscaffold_5G00377320 Rroxscaffold_5G00377330 Rroxscaffold_7G00183080 Rroxscaffold_7G00184560 Rroxscaffold_7G00216010
rosa_rugosa	Rorug02G0381000
rosa_samantha	Rh1AG155000 Rh1AG167000 Rh2AG095000 Rh3BG335500 Rh4AG082900 Rh4CG090200 Rh5CG445500 Rh7DG403200
rosa_wichuraiana	Rw0G001000 Rw0G014090 Rw0G019800 Rw0G020130 Rw0G020350 Rw1G002560 Rw1G013310 Rw1G014300 Rw1G014670 Rw1G016610 Rw1G021110 Rw1G024950 Rw1G028180 Rw2G020910 Rw2G024170 Rw2G024770 Rw2G029990 Rw2G031960 Rw2G034100 Rw3G013950 Rw3G028980 Rw3G029200 Rw4G004150 Rw4G008130 Rw4G012200 Rw4G018750 Rw4G019330 Rw4G021010 Rw4G022120 Rw4G030810 Rw5G015840 Rw5G015850 Rw5G022430 Rw5G022480 Rw5G026870 Rw5G033550 Rw6G009170 Rw6G010190 Rw6G011570 Rw6G018280 Rw6G023730 Rw7G025660 Rw7G029890 Rw7G031130 Rw7G042550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	932, 1081
AccBSI	CCGCTC	2 cut(s)	68, 128
AciI	CCGC	9 cut(s)	66, 117, 128, 155, 215, 638, 712, 775, 861
AclI	AACGTT	1 cut(s)	466
AclWI	GGATC	2 cut(s)	870, 883
AcoI	YGGCCR	1 cut(s)	103
AcsI	RAATTY	2 cut(s)	266, 843
AcyI	GRCGYC	1 cut(s)	933
AfaI	GTAC	3 cut(s)	257, 749, 1116
AfiI	CCNNNNNNNGG	7 cut(s)	127, 277, 502, 531, 546, 557, 929
AflIII	ACRYGT	1 cut(s)	948
AgsI	TTSAA	2 cut(s)	247, 472
AjnI	CCWGG	4 cut(s)	550, 707, 1031, 1084
AluBI	AGCT	4 cut(s)	28, 308, 413, 769
AluI	AGCT	4 cut(s)	28, 308, 413, 769
Alw21I	GWGCWC	1 cut(s)	30
Alw26I	GTCTC	2 cut(s)	224, 330
AlwI	GGATC	2 cut(s)	870, 883
Ama87I	CYCGRG	1 cut(s)	333
AoxI	GGCC	6 cut(s)	103, 118, 548, 705, 920, 1034
ApoI	RAATTY	2 cut(s)	266, 843
AspLEI	GCGC	1 cut(s)	935
AspS9I	GGNCC	5 cut(s)	119, 548, 641, 664, 921
AsuC2I	CCSGG	4 cut(s)	107, 532, 701, 880
AsuII	TTCGAA	1 cut(s)	408
AsuNHI	GCTAGC	1 cut(s)	535
AvaI	CYCGRG	1 cut(s)	333
AvaII	GGWCC	2 cut(s)	641, 664
BaeGI	GKGCMC	1 cut(s)	701
BamHI	GGATCC	1 cut(s)	875
BanI	GGYRCC	2 cut(s)	932, 1081
BanII	GRGCYC	2 cut(s)	30, 66
BbsI	GAAGAC	1 cut(s)	12
Bbv12I	GWGCWC	1 cut(s)	30
BccI	CCATC	1 cut(s)	655
BceAI	ACGGC	3 cut(s)	202, 948, 1095
BciT130I	CCWGG	4 cut(s)	552, 709, 1033, 1086
BciVI	GTATCC	2 cut(s)	100, 984
BclI	TGATCA	1 cut(s)	831
BcnI	CCSGG	4 cut(s)	107, 532, 701, 880
BcoDI	GTCTC	2 cut(s)	224, 330
BfaI	CTAG	4 cut(s)	536, 587, 645, 744
BfoI	RGCGCY	1 cut(s)	936
BfuI	GTATCC	2 cut(s)	100, 984
BisI	GCNGC	2 cut(s)	118, 713
BlsI	GCNGC	2 cut(s)	119, 714
Bme1390I	CCNGG	8 cut(s)	107, 532, 552, 701, 709, 880, 1033, 1086
Bme18I	GGWCC	2 cut(s)	641, 664
BmeT110I	CYCGRG	1 cut(s)	333
BmgT120I	GGNCC	5 cut(s)	119, 548, 641, 664, 921
BmiI	GGNNCC	7 cut(s)	121, 420, 642, 666, 877, 934, 1083
BmrFI	CCNGG	8 cut(s)	107, 532, 552, 701, 709, 880, 1033, 1086
BmsI	GCATC	5 cut(s)	129, 290, 488, 511, 950
BmtI	GCTAGC	1 cut(s)	539
BpiI	GAAGAC	1 cut(s)	12
BpmI	CTGGAG	1 cut(s)	190
Bpu10I	CCTNAGC	1 cut(s)	414
Bpu14I	TTCGAA	1 cut(s)	408
BpuEI	CTTGAG	1 cut(s)	785
BpuMI	CCSGG	4 cut(s)	107, 532, 701, 880
BsaAI	YACGTR	1 cut(s)	657
BsaHI	GRCGYC	1 cut(s)	933
BsaJI	CCNNGG	4 cut(s)	551, 936, 1031, 1085
BsaWI	WCCGGW	1 cut(s)	542
BsaXI	ACNNNNNCTCC	4 cut(s)	410, 440, 680, 710
Bsc4I	CCNNNNNNNGG	7 cut(s)	127, 277, 502, 531, 546, 557, 929
Bse118I	RCCGGY	1 cut(s)	157
Bse1I	ACTGG	1 cut(s)	271
BseBI	CCWGG	4 cut(s)	552, 709, 1033, 1086
BseDI	CCNNGG	4 cut(s)	551, 936, 1031, 1085
BseGI	GGATG	3 cut(s)	144, 492, 666
BseLI	CCNNNNNNNGG	7 cut(s)	127, 277, 502, 531, 546, 557, 929
BseMII	CTCAG	5 cut(s)	15, 51, 87, 437, 587
BseNI	ACTGG	1 cut(s)	271
BseSI	GKGCMC	1 cut(s)	701
BseX3I	CGGCCG	1 cut(s)	103
Bsh1285I	CGRYCG	2 cut(s)	106, 884
BshFI	GGCC	6 cut(s)	105, 120, 550, 707, 922, 1036
BshNI	GGYRCC	2 cut(s)	932, 1081
BsiEI	CGRYCG	2 cut(s)	106, 884
BsiHKAI	GWGCWC	1 cut(s)	30
BsiHKCI	CYCGRG	1 cut(s)	333
BsiSI	CCGG	6 cut(s)	106, 158, 532, 543, 701, 880
BslFI	GGGAC	1 cut(s)	654
BslI	CCNNNNNNNGG	7 cut(s)	127, 277, 502, 531, 546, 557, 929
BsmAI	GTCTC	2 cut(s)	224, 330
BsmFI	GGGAC	1 cut(s)	654
BsnI	GGCC	6 cut(s)	105, 120, 550, 707, 922, 1036
BsoBI	CYCGRG	1 cut(s)	333
Bsp119I	TTCGAA	1 cut(s)	408
Bsp1286I	GDGCHC	3 cut(s)	30, 66, 701
Bsp143I	GATC	3 cut(s)	99, 831, 875
Bsp19I	CCATGG	1 cut(s)	936
BspACI	CCGC	9 cut(s)	66, 117, 128, 155, 215, 638, 712, 775, 861
BspANI	GGCC	6 cut(s)	105, 120, 550, 707, 922, 1036
BspCNI	CTCAG	5 cut(s)	16, 52, 88, 436, 588
BspHI	TCATGA	2 cut(s)	756, 847
BspLI	GGNNCC	7 cut(s)	121, 420, 642, 666, 877, 934, 1083
BspOI	GCTAGC	1 cut(s)	539
BspPI	GGATC	2 cut(s)	870, 883
BspT104I	TTCGAA	1 cut(s)	408
BspT107I	GGYRCC	2 cut(s)	932, 1081
BsrBI	CCGCTC	2 cut(s)	68, 128
BsrFI	RCCGGY	1 cut(s)	157
BsrI	ACTGG	1 cut(s)	271
BssAI	RCCGGY	1 cut(s)	157
BssECI	CCNNGG	4 cut(s)	551, 936, 1031, 1085
BssMI	GATC	3 cut(s)	99, 831, 875
BssNI	GRCGYC	1 cut(s)	933
BssT1I	CCWWGG	1 cut(s)	936
Bst2UI	CCWGG	4 cut(s)	552, 709, 1033, 1086
Bst4CI	ACNGT	1 cut(s)	1047
BstACI	GRCGYC	1 cut(s)	933
BstBAI	YACGTR	1 cut(s)	657
BstBI	TTCGAA	1 cut(s)	408
BstC8I	GCNNGC	5 cut(s)	66, 159, 537, 717, 981
BstDEI	CTNAG	6 cut(s)	24, 60, 96, 414, 423, 596
BstDSI	CCRYGG	1 cut(s)	936
BstENI	CCTNNNNNAGG	1 cut(s)	555
BstF5I	GGATG	3 cut(s)	144, 492, 666
BstH2I	RGCGCY	1 cut(s)	936
BstHHI	GCGC	1 cut(s)	935
BstKTI	GATC	3 cut(s)	102, 834, 878
BstMAI	GTCTC	2 cut(s)	224, 330
BstMBI	GATC	3 cut(s)	99, 831, 875
BstMCI	CGRYCG	2 cut(s)	106, 884
BstMWI	GCNNNNNNNGC	4 cut(s)	427, 536, 896, 969
BstNI	CCWGG	4 cut(s)	552, 709, 1033, 1086
BstNSI	RCATGY	2 cut(s)	719, 952
BstSCI	CCNGG	8 cut(s)	105, 530, 550, 699, 707, 878, 1031, 1084
BstSLI	GKGCMC	1 cut(s)	701
BstV2I	GAAGAC	1 cut(s)	12
BstX2I	RGATCY	1 cut(s)	875
BstYI	RGATCY	1 cut(s)	875
BstZI	CGGCCG	1 cut(s)	103
BsuI	GTATCC	2 cut(s)	100, 984
BsuRI	GGCC	6 cut(s)	105, 120, 550, 707, 922, 1036
BtgI	CCRYGG	1 cut(s)	936
BtsCI	GGATG	3 cut(s)	144, 492, 666
BtsIMutI	CAGTG	2 cut(s)	373, 1052
Cac8I	GCNNGC	5 cut(s)	66, 159, 537, 717, 981
CciI	TCATGA	2 cut(s)	756, 847
CfoI	GCGC	1 cut(s)	935
Cfr10I	RCCGGY	1 cut(s)	157
Cfr13I	GGNCC	5 cut(s)	119, 548, 641, 664, 921
Csp6I	GTAC	3 cut(s)	256, 748, 1115
CspCI	CAANNNNNGTGG	2 cut(s)	988, 1023
CviAII	CATG	9 cut(s)	251, 628, 716, 757, 848, 928, 937, 949, 1118
CviQI	GTAC	3 cut(s)	256, 748, 1115
DdeI	CTNAG	6 cut(s)	24, 60, 96, 414, 423, 596
DinI	GGCGCC	1 cut(s)	934
DpnI	GATC	3 cut(s)	101, 833, 877
DpnII	GATC	3 cut(s)	99, 831, 875
EaeI	YGGCCR	1 cut(s)	103
EagI	CGGCCG	1 cut(s)	103
Ecl136II	GAGCTC	1 cut(s)	28
EclXI	CGGCCG	1 cut(s)	103
Eco130I	CCWWGG	1 cut(s)	936
Eco24I	GRGCYC	2 cut(s)	30, 66
Eco47I	GGWCC	2 cut(s)	641, 664
Eco52I	CGGCCG	1 cut(s)	103
Eco53kI	GAGCTC	1 cut(s)	28
Eco88I	CYCGRG	1 cut(s)	333
EcoICRI	GAGCTC	1 cut(s)	28
EcoNI	CCTNNNNNAGG	1 cut(s)	555
EcoO109I	RGGNCCY	2 cut(s)	548, 641
EcoRI	GAATTC	1 cut(s)	266
EcoRII	CCWGG	4 cut(s)	550, 707, 1031, 1084
EcoT14I	CCWWGG	1 cut(s)	936
EcoT38I	GRGCYC	2 cut(s)	30, 66
EgeI	GGCGCC	1 cut(s)	934
EheI	GGCGCC	1 cut(s)	934
ErhI	CCWWGG	1 cut(s)	936
FaeI	CATG	9 cut(s)	254, 631, 719, 760, 851, 931, 940, 952, 1121
FaqI	GGGAC	1 cut(s)	654
FatI	CATG	9 cut(s)	250, 627, 715, 756, 847, 927, 936, 948, 1117
FauI	CCCGC	4 cut(s)	73, 208, 631, 854
FbaI	TGATCA	1 cut(s)	831
Fnu4HI	GCNGC	2 cut(s)	118, 713
FokI	GGATG	3 cut(s)	151, 479, 673
FriOI	GRGCYC	2 cut(s)	30, 66
Fsp4HI	GCNGC	2 cut(s)	118, 713
FspBI	CTAG	4 cut(s)	536, 587, 645, 744
GlaI	GCGC	1 cut(s)	934
GluI	GCNGC	2 cut(s)	118, 713
GsuI	CTGGAG	1 cut(s)	190
HaeII	RGCGCY	1 cut(s)	936
HaeIII	GGCC	6 cut(s)	105, 120, 550, 707, 922, 1036
HapII	CCGG	6 cut(s)	106, 158, 532, 543, 701, 880
HhaI	GCGC	1 cut(s)	935
Hin1I	GRCGYC	1 cut(s)	933
Hin1II	CATG	9 cut(s)	254, 631, 719, 760, 851, 931, 940, 952, 1121
Hin6I	GCGC	1 cut(s)	933
HinP1I	GCGC	1 cut(s)	933
HincII	GTYRAC	2 cut(s)	184, 397
HindII	GTYRAC	2 cut(s)	184, 397
HindIII	AAGCTT	1 cut(s)	306
HinfI	GANTC	6 cut(s)	17, 53, 232, 243, 371, 865
HpaII	CCGG	6 cut(s)	106, 158, 532, 543, 701, 880
Hpy166II	GTNNAC	3 cut(s)	184, 397, 750
Hpy188I	TCNGA	4 cut(s)	25, 61, 97, 619
Hpy188III	TCNNGA	6 cut(s)	169, 735, 757, 848, 873, 1066
Hpy8I	GTNNAC	3 cut(s)	184, 397, 750
HpyAV	CCTTC	5 cut(s)	496, 562, 679, 815, 845
HpyCH4III	ACNGT	1 cut(s)	1047
HpyCH4IV	ACGT	2 cut(s)	466, 656
HpyCH4V	TGCA	7 cut(s)	142, 325, 430, 463, 719, 979, 1043
HpyF10VI	GCNNNNNNNGC	4 cut(s)	427, 536, 896, 969
HpyF3I	CTNAG	6 cut(s)	24, 60, 96, 414, 423, 596
HpySE526I	ACGT	2 cut(s)	466, 656
Hsp92I	GRCGYC	1 cut(s)	933
Hsp92II	CATG	9 cut(s)	254, 631, 719, 760, 851, 931, 940, 952, 1121
HspAI	GCGC	1 cut(s)	933
KasI	GGCGCC	1 cut(s)	932
KroI	GCCGGC	1 cut(s)	157
KroNI	GCCGGC	1 cut(s)	159
Ksp22I	TGATCA	1 cut(s)	831
Kzo9I	GATC	3 cut(s)	99, 831, 875
LmnI	GCTCC	2 cut(s)	73, 418
LweI	GCATC	5 cut(s)	129, 290, 488, 511, 950
MaeI	CTAG	4 cut(s)	536, 587, 645, 744
MaeII	ACGT	2 cut(s)	466, 656
MaeIII	GTNAC	3 cut(s)	726, 782, 808
MalI	GATC	3 cut(s)	101, 833, 877
MbiI	CCGCTC	2 cut(s)	68, 128
MboI	GATC	3 cut(s)	99, 831, 875
MboII	GAAGA	4 cut(s)	12, 52, 161, 830
MfeI	CAATTG	1 cut(s)	377
MflI	RGATCY	1 cut(s)	875
MhlI	GDGCHC	3 cut(s)	30, 66, 701
MluCI	AATT	5 cut(s)	266, 377, 576, 787, 843
Mly113I	GGCGCC	1 cut(s)	933
MlyI	GAGTC	3 cut(s)	26, 62, 226
MmeI	TCCRAC	1 cut(s)	220
MroNI	GCCGGC	1 cut(s)	157
MseI	TTAA	4 cut(s)	276, 311, 1094, 1110
MslI	CAYNNNNRTG	4 cut(s)	35, 344, 755, 1122
MspI	CCGG	6 cut(s)	106, 158, 532, 543, 701, 880
MspR9I	CCNGG	8 cut(s)	107, 532, 552, 701, 709, 880, 1033, 1086
MunI	CAATTG	1 cut(s)	377
MvaI	CCWGG	4 cut(s)	552, 709, 1033, 1086
MwoI	GCNNNNNNNGC	4 cut(s)	427, 536, 896, 969
NaeI	GCCGGC	1 cut(s)	159
NarI	GGCGCC	1 cut(s)	933
NciI	CCSGG	4 cut(s)	107, 532, 701, 880
NcoI	CCATGG	1 cut(s)	936
NdeII	GATC	3 cut(s)	99, 831, 875
NgoMIV	GCCGGC	1 cut(s)	157
NheI	GCTAGC	1 cut(s)	535
NlaIII	CATG	9 cut(s)	254, 631, 719, 760, 851, 931, 940, 952, 1121
NlaIV	GGNNCC	7 cut(s)	121, 420, 642, 666, 877, 934, 1083
NmuCI	GTSAC	1 cut(s)	808
NspI	RCATGY	2 cut(s)	719, 952
NspV	TTCGAA	1 cut(s)	408
PaeI	GCATGC	1 cut(s)	719
PagI	TCATGA	2 cut(s)	756, 847
PciI	ACATGT	1 cut(s)	948
PcsI	WCGNNNNNNNCGW	1 cut(s)	405
PdiI	GCCGGC	1 cut(s)	159
PfeI	GAWTC	3 cut(s)	243, 371, 865
PkrI	GCNGC	2 cut(s)	119, 714
PleI	GAGTC	3 cut(s)	25, 61, 226
PluTI	GGCGCC	1 cut(s)	936
PpsI	GAGTC	3 cut(s)	25, 61, 226
Ppu21I	YACGTR	1 cut(s)	657
PpuMI	RGGWCCY	1 cut(s)	641
PscI	ACATGT	1 cut(s)	948
Psp124BI	GAGCTC	1 cut(s)	30
Psp1406I	AACGTT	1 cut(s)	466
Psp5II	RGGWCCY	1 cut(s)	641
Psp6I	CCWGG	4 cut(s)	550, 707, 1031, 1084
PspGI	CCWGG	4 cut(s)	550, 707, 1031, 1084
PspN4I	GGNNCC	7 cut(s)	121, 420, 642, 666, 877, 934, 1083
PspPI	GGNCC	5 cut(s)	119, 548, 641, 664, 921
PspPPI	RGGWCCY	1 cut(s)	641
PsuI	RGATCY	1 cut(s)	875
RsaI	GTAC	3 cut(s)	257, 749, 1116
RsaNI	GTAC	3 cut(s)	256, 748, 1115
RseI	CAYNNNNRTG	4 cut(s)	35, 344, 755, 1122
SacI	GAGCTC	1 cut(s)	30
SaqAI	TTAA	4 cut(s)	276, 311, 1094, 1110
SatI	GCNGC	2 cut(s)	118, 713
Sau3AI	GATC	3 cut(s)	99, 831, 875
Sau96I	GGNCC	5 cut(s)	119, 548, 641, 664, 921
SchI	GAGTC	3 cut(s)	26, 62, 226
ScrFI	CCNGG	8 cut(s)	107, 532, 552, 701, 709, 880, 1033, 1086
SduI	GDGCHC	3 cut(s)	30, 66, 701
SfaNI	GCATC	5 cut(s)	129, 290, 488, 511, 950
SfoI	GGCGCC	1 cut(s)	934
SfuI	TTCGAA	1 cut(s)	408
SinI	GGWCC	2 cut(s)	641, 664
SmiMI	CAYNNNNRTG	4 cut(s)	35, 344, 755, 1122
SmlI	CTYRAG	1 cut(s)	800
SmoI	CTYRAG	1 cut(s)	800
SphI	GCATGC	1 cut(s)	719
Sse9I	AATT	5 cut(s)	266, 377, 576, 787, 843
SsiI	CCGC	9 cut(s)	66, 117, 128, 155, 215, 638, 712, 775, 861
SspDI	GGCGCC	1 cut(s)	932
SspI	AATATT	1 cut(s)	225
SspMI	CTAG	4 cut(s)	536, 587, 645, 744
SstI	GAGCTC	1 cut(s)	30
StyD4I	CCNGG	8 cut(s)	105, 530, 550, 699, 707, 878, 1031, 1084
StyI	CCWWGG	1 cut(s)	936
TaaI	ACNGT	1 cut(s)	1047
TaiI	ACGT	2 cut(s)	469, 659
TaqI	TCGA	5 cut(s)	191, 408, 633, 734, 1065
TasI	AATT	5 cut(s)	266, 377, 576, 787, 843
TatI	WGTACW	1 cut(s)	1114
TauI	GCSGC	2 cut(s)	120, 715
TfiI	GAWTC	3 cut(s)	243, 371, 865
Tru1I	TTAA	4 cut(s)	276, 311, 1094, 1110
Tru9I	TTAA	4 cut(s)	276, 311, 1094, 1110
TscAI	CASTG	2 cut(s)	373, 1052
TseFI	GTSAC	1 cut(s)	808
Tsp45I	GTSAC	1 cut(s)	808
TspDTI	ATGAA	9 cut(s)	17, 53, 162, 318, 616, 698, 773, 836, 864
TspRI	CASTG	2 cut(s)	373, 1052
VpaK11BI	GGWCC	2 cut(s)	641, 664
XagI	CCTNNNNNAGG	1 cut(s)	555
XapI	RAATTY	2 cut(s)	266, 843
XceI	RCATGY	2 cut(s)	719, 952
XcmI	CCANNNNNNNNNTGG	1 cut(s)	79
XspI	CTAG	4 cut(s)	536, 587, 645, 744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.