FvH4_1g25831

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
17745686 .. 17746129
444 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g25831.t1

Sequence Viewer

Length: 330 bp
ATGAAGGCTTTCATTGTCGAGCGTATGCTCATTATGAAGATCACATCACCTGTCGAGATCATTACCGTCAGAGGGGACCAAGGAACCAGTACGAGTTGTTATTCCTTGGTAGTAGACCACGAGAGGGAACGATCAAGAGTGCTCACAACCAATCAGTCGGGGGCAAACAATGGAGTGTATGCTTGGTCGTATGAAGATATACTAGGGATAACAACAAATGTAGTGATGAACAAGTTGAGTATTGAGAAAGGCAACATACCGGTGAGGCAAAAACGAAGATCGTTTGACCCAAAGAAGTACGAAGTGATCAGGGGGAAGTGCACAAGTTAA

Protein Analysis

110

Amino Acids

12.36

Weight (kDa)

9.59

Isoelectric Point (pI)

49.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000250)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22373 FvH4_1g22374 FvH4_1g25831 FvH4_1g28031 FvH4_2g11354 FvH4_3g11301 FvH4_3g11302 FvH4_3g14364 FvH4_3g20862 FvH4_4g15482 FvH4_4g15483 FvH4_4g15484 FvH4_5g25502 FvH4_5g37242 FvH4_6g18432 FvH4_6g18433 FvH4_6g20952 FvH4_7g02201 FvH4_7g10991
prunus_persica Prupe.6G166700_v2.0.a1
pyrus_communis pycom01g03860 pycom02g16130 pycom05g08340 pycom07g08280 pycom16g20980 pycom16g25810
rosa_chinensis RchiOBHm_Chr5g0018261
rosa_laevigata RLG00000022447
rosa_multiflora Rmu_co7963284.1_g000001 Rmu_co7968088.1_g000001 Rmu_co8036800.1_g000001 Rmu_co8110294.1_g000001 Rmu_co8291955.1_g000001 Rmu_co8396209.1_g000002 Rmu_co8413879.1_g000001 Rmu_co8464165.1_g000001 Rmu_co8469565.1_g000001 Rmu_co8485695.1_g000003 Rmu_co8486821.1_g000003 Rmu_co8515379.1_g000001 Rmu_sc0000239.1_g000074 Rmu_sc0000327.1_g000028 Rmu_sc0000509.1_g000002 Rmu_sc0000677.1_g000042 Rmu_sc0000756.1_g000032 Rmu_sc0000782.1_g000013 Rmu_sc0001144.1_g000044 Rmu_sc0001861.1_g000003 Rmu_sc0002371.1_g000016 Rmu_sc0002451.1_g000061 Rmu_sc0002764.1_g000053 Rmu_sc0002868.1_g000041 Rmu_sc0003735.1_g000026 Rmu_sc0004654.1_g000006 Rmu_sc0005038.1_g000020 Rmu_sc0005236.1_g000001 Rmu_sc0006725.1_g000004 Rmu_sc0010685.1_g000001 Rmu_sc0011973.1_g000010 Rmu_sc0012722.1_g000001 Rmu_sc0015925.1_g000002 Rmu_sc0017188.1_g000001 Rmu_sc0021806.1_g000001 Rmu_sc0033125.1_g000001 Rmu_sc0038204.1_g000001 Rmu_ssc0000215.1_g000038
rosa_roxburghii Rroxscaffold_1G00001020 Rroxscaffold_1G00027520 Rroxscaffold_3G00228140 Rroxscaffold_4G00320850 Rroxscaffold_4G00321830 Rroxscaffold_4G00321840 Rroxscaffold_4G00332450 Rroxscaffold_5G00344360 Rroxscaffold_5G00365190 Rroxscaffold_5G00377320 Rroxscaffold_5G00377330 Rroxscaffold_7G00183080 Rroxscaffold_7G00184560 Rroxscaffold_7G00216010
rosa_rugosa Rorug02G0381000
rosa_samantha Rh1AG155000 Rh1AG167000 Rh2AG095000 Rh3BG335500 Rh4AG082900 Rh4CG090200 Rh5CG445500 Rh7DG403200
rosa_wichuraiana Rw0G001000 Rw0G014090 Rw0G019800 Rw0G020130 Rw0G020350 Rw1G002560 Rw1G013310 Rw1G014300 Rw1G014670 Rw1G016610 Rw1G021110 Rw1G024950 Rw1G028180 Rw2G020910 Rw2G024170 Rw2G024770 Rw2G029990 Rw2G031960 Rw2G034100 Rw3G013950 Rw3G028980 Rw3G029200 Rw4G004150 Rw4G008130 Rw4G012200 Rw4G018750 Rw4G019330 Rw4G021010 Rw4G022120 Rw4G030810 Rw5G015840 Rw5G015850 Rw5G022430 Rw5G022480 Rw5G026870 Rw5G033550 Rw6G009170 Rw6G010190 Rw6G011570 Rw6G018280 Rw6G023730 Rw7G025660 Rw7G029890 Rw7G031130 Rw7G042550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 114
AfaI GTAC 2 cut(s) 91, 299
AfiI CCNNNNNNNGG 2 cut(s) 72, 124
AgeI ACCGGT 1 cut(s) 259
Alw21I GWGCWC 2 cut(s) 144, 323
Alw44I GTGCAC 1 cut(s) 319
ApaLI GTGCAC 1 cut(s) 319
AsiGI ACCGGT 1 cut(s) 259
Asp700I GAANNNNTTC 1 cut(s) 8
AspS9I GGNCC 1 cut(s) 76
AsuHPI GGTGA 2 cut(s) 39, 274
AvaII GGWCC 1 cut(s) 76
BaeGI GKGCMC 1 cut(s) 323
BauI CACGAG 1 cut(s) 119
Bbv12I GWGCWC 2 cut(s) 144, 323
BclI TGATCA 1 cut(s) 306
BfaI CTAG 1 cut(s) 203
Bme18I GGWCC 1 cut(s) 76
BmgT120I GGNCC 1 cut(s) 76
BmiI GGNNCC 2 cut(s) 77, 85
BsaJI CCNNGG 2 cut(s) 79, 105
BsaWI WCCGGW 1 cut(s) 259
Bsc4I CCNNNNNNNGG 2 cut(s) 72, 124
Bse118I RCCGGY 1 cut(s) 259
Bse1I ACTGG 1 cut(s) 87
BseDI CCNNGG 2 cut(s) 79, 105
BseLI CCNNNNNNNGG 2 cut(s) 72, 124
BseNI ACTGG 1 cut(s) 87
BseSI GKGCMC 1 cut(s) 323
BshTI ACCGGT 1 cut(s) 259
BsiHKAI GWGCWC 2 cut(s) 144, 323
BsiSI CCGG 1 cut(s) 260
BslFI GGGAC 1 cut(s) 89
BslI CCNNNNNNNGG 2 cut(s) 72, 124
BsmFI GGGAC 1 cut(s) 89
Bsp1286I GDGCHC 2 cut(s) 144, 323
Bsp143I GATC 5 cut(s) 39, 57, 131, 278, 306
BspLI GGNNCC 2 cut(s) 77, 85
BsrFI RCCGGY 1 cut(s) 259
BsrI ACTGG 1 cut(s) 87
BssAI RCCGGY 1 cut(s) 259
BssECI CCNNGG 2 cut(s) 79, 105
BssMI GATC 5 cut(s) 39, 57, 131, 278, 306
BssSI CACGAG 1 cut(s) 119
BssT1I CCWWGG 2 cut(s) 79, 105
Bst2BI CACGAG 1 cut(s) 119
Bst4CI ACNGT 1 cut(s) 67
BstKTI GATC 5 cut(s) 42, 60, 134, 281, 309
BstMBI GATC 5 cut(s) 39, 57, 131, 278, 306
BstSLI GKGCMC 1 cut(s) 323
Cfr10I RCCGGY 1 cut(s) 259
Cfr13I GGNCC 1 cut(s) 76
Csp6I GTAC 2 cut(s) 90, 298
CspAI ACCGGT 1 cut(s) 259
CviJI RGCY 1 cut(s) 8
CviKI_1 RGCY 1 cut(s) 8
CviQI GTAC 2 cut(s) 90, 298
DpnI GATC 5 cut(s) 41, 59, 133, 280, 308
DpnII GATC 5 cut(s) 39, 57, 131, 278, 306
Eco130I CCWWGG 2 cut(s) 79, 105
Eco47I GGWCC 1 cut(s) 76
EcoT14I CCWWGG 2 cut(s) 79, 105
ErhI CCWWGG 2 cut(s) 79, 105
FaiI YATR 6 cut(s) 26, 35, 180, 192, 200, 257
FaqI GGGAC 1 cut(s) 89
FbaI TGATCA 1 cut(s) 306
FblI GTMKAC 1 cut(s) 114
FspBI CTAG 1 cut(s) 203
HapII CCGG 1 cut(s) 260
HpaII CCGG 1 cut(s) 260
HphI GGTGA 2 cut(s) 39, 274
Hpy166II GTNNAC 2 cut(s) 115, 321
Hpy188I TCNGA 1 cut(s) 71
Hpy188III TCNNGA 2 cut(s) 55, 135
Hpy8I GTNNAC 2 cut(s) 115, 321
HpyCH4III ACNGT 1 cut(s) 67
HpyCH4V TGCA 1 cut(s) 321
Ksp22I TGATCA 1 cut(s) 306
Kzo9I GATC 5 cut(s) 39, 57, 131, 278, 306
LpnPI CCDG 4 cut(s) 63, 100, 273, 295
MaeI CTAG 1 cut(s) 203
MalI GATC 5 cut(s) 41, 59, 133, 280, 308
MboI GATC 5 cut(s) 39, 57, 131, 278, 306
MboII GAAGA 3 cut(s) 49, 206, 288
MhlI GDGCHC 2 cut(s) 144, 323
MnlI CCTC 3 cut(s) 65, 117, 258
MroXI GAANNNNTTC 1 cut(s) 8
MseI TTAA 1 cut(s) 328
MslI CAYNNNNRTG 1 cut(s) 260
MspI CCGG 1 cut(s) 260
NdeII GATC 5 cut(s) 39, 57, 131, 278, 306
NlaIV GGNNCC 2 cut(s) 77, 85
PdmI GAANNNNTTC 1 cut(s) 8
PinAI ACCGGT 1 cut(s) 259
PspN4I GGNNCC 2 cut(s) 77, 85
PspPI GGNCC 1 cut(s) 76
RsaI GTAC 2 cut(s) 91, 299
RsaNI GTAC 2 cut(s) 90, 298
RseI CAYNNNNRTG 1 cut(s) 260
SaqAI TTAA 1 cut(s) 328
Sau3AI GATC 5 cut(s) 39, 57, 131, 278, 306
Sau96I GGNCC 1 cut(s) 76
SduI GDGCHC 2 cut(s) 144, 323
SetI ASST 1 cut(s) 52
SinI GGWCC 1 cut(s) 76
SmiMI CAYNNNNRTG 1 cut(s) 260
SspMI CTAG 1 cut(s) 203
StyI CCWWGG 2 cut(s) 79, 105
TaaI ACNGT 1 cut(s) 67
TaqI TCGA 2 cut(s) 18, 54
Tru1I TTAA 1 cut(s) 328
Tru9I TTAA 1 cut(s) 328
TspDTI ATGAA 4 cut(s) 17, 50, 207, 242
VneI GTGCAC 1 cut(s) 319
VpaK11BI GGWCC 1 cut(s) 76
XmiI GTMKAC 1 cut(s) 114
XmnI GAANNNNTTC 1 cut(s) 8
XspI CTAG 1 cut(s) 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.