Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000174

Physical Location & Seq

Genomic Coordinates Forward (+)

1459118 .. 1462466

Gene Structure 3349 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g01640.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3009 bp

ATGACTGAAATGGCCAGTACCATTGTGCCCGCAGAGTTGGGGTGCCTTGATGTCCCTCTTAGCATACACAAAAGGAGATGGCGTTCGGCGTTTGTCACCATTTACTGCTCTAGAGCCTTCCAGTCATTCTTCCAGTCAGTGTCCGACAACAACGGTTTCAAACTAGACCAAAGAACCCTCACTCAGCTTGTCAAGGAGAAAAGTCTTGGTAAGCTCCAAGAGTTGGGAGGGGCTGAAGGAGTAACATCAGCTCTCAAAACTAATGCAAAGCTTGGAGTTTGCGGTAATGCTCAAGATGTTGCGCACCGGATTGAAGCGTTTGGTTCGAATACATACAAGACAGCAGCAGCCAAGAAGTTCTTCCATTTTGTGTGGGAAGCATGCCAAGACCTCACAATTTTCATTCTTATAGGCTGTGCTGTACTTTCTCTTGCTTTTGGCATTATAGAGCACGGACTAAGAGAAGGTTGGAGTGATGGTGGAAGCATATTTCTCGCAGTCATTCTGGTGATTTCAGTGTCTGCCATAAGCAATTACAGGCAGCACATAGAGTTTGACAAATTGTCAAAAGTCGGTAGCAATCTCCAAATTGAAGCTGTCAGAAATGGCATCAGACTACAGATTTCAATATTTGAAATTGTGGTTGGAGATATCATTTGCTTAAAGATCGGAGATCAAGTTCCAGCCGATGGGTTGCTCTTGGAGGGATATTCATTGGAAGTAGATGAGTCGAGCATGACAGGGGAGAGTGACCATGTGGAAATCAGCCAAAGCCATAACCCCTTCTTGTTTTCTGGCACCAAAGTGGTTGATGGGTACGCTCAGATGCTTGTCACTTCCGTCGGCATGAACACAACTTGGGGCGAAATGATGAGCCAAATCAGCAGCGATACAAGTGAACAGACACCTTTACAATCTCGCATCCACAGGCTAGCCTCATCAATAGGTATAGTTGGTCTGCTAGTAGCTTTGTTAAATCTCATAGTCTCGAAGATATACTACTTCACTGGAAAAACCAAGGACAAACATGGGAAGAAGGAGTTCAATGGGAGCAGAACCAAAGTGCATCACGTAATAATTGCCGTGGTTGGGATGGTAGGAACTGCAGTTACAATTGTTGTGGCTGCAATTCCAGAAGGTTTACCAGTTGCCATGACAATTACTTTTTGTTATGCTATGAGGAGAATGATGGCTGATAATGCAATGGTTAGGAAACTCTCTGCTTGTGAGATTATGGGCTCTGCTACCACCATTTGCACTGACAAAACAGGAACTCTTACCATGAATCATATGAAGGTGACCAAGTTCTGGATAGGTGAAAATCCCGTGGAAGAAGCCTACTCATCAATCTCATCAGGTCTTCTTAGCTTGATTCGAGAAGGGGTTGCTATGAACACAACCGGTTCTGCTTCTAGGCATATCTCAGGAACTGGATTTGAATTTTCAGGCAGTCCTACTGAACAAGCCATTCTTTCTTGGGCATCTCTGGAGCTGGATATGGACATGGATACATTGAAAAATAATTGTGTCATTCAAGGTGTTGAAGCCTTCAATTCACACAAGAAAAGGAGTGGGATTGTGATCAAGAGGAAGGTAGACAACACAATGCACGTACATTGGAAAGGGGCTGCAGAGGTGATACTAGCAATGTGCACAAGTTACCACAACGCCTCAGGGGATATATTTGATATGGATGATGTTGCAAAGCAAGAACTTGAATGTATTATTCAAGGTATGGCAGCTAGTAGCCTGCGATGCATTGCAATTGCTCACAGAGAAGTATCCGCAGAGGAGCAAGTGGTTCCAGAACAGAAGACTTTGCTAAAAGACAATGGCTTGACCCTAATAGGGCTTGTGGGTCTTAAAGATCCATGTCGGCCAGGAGTGAAGAAAGCTGTTGAGAACTGTCACTATGCAGGGGTAAACATCAAAATGATCACAGGTGACAACATTTTTACTGCACAATCAATAGCCACAGAATGTGGGATACTCAAGCCTGGGCAGGACACAATCAGTGAAGCTGTGATCGAGGGTGTGCAATTTCGGAACTACACACCAGAAGAGAGAATGGAGAAAGTAGACAACATCCGTGTCATGGCAAGGTCATCCCCTTTAGATAAGCTTCTTATGGTGCAATGCTTGAAGCAGAAAGGTCACGTAGTTGCAGTGACTGGTGACGGCACAAATGATGCTCCTGCATTGAAAGAAGCTGATGTAGGTCTCTCTATGGGGCTGCAAGGCACCGAAGTTGCGAAAGAGAGCTCGGACATTGTGATCATGGATGACAATTTTGCTTCAGTGGCCACAGTTTTGATGTGGGGAAGATGTGTTCACAATAACATCCAAAAGTTCATTCAATTCCAACTCACCGTCAATGTTGCAGCTCTTGTAATCAACTTTGTAGCAGCAGTTTCAGCAGGTGAGGTTCCCTTAACAGCAGTCCAGTTATTGTGGGTGAACTTGATCATGGACACACTCGGTGCTCTTGCCCTTGCTACAGACAAACCCACAAAAGAACTCATGGAGAATCCACCTGTGAGCAGAACGGAGCCTCTCATCACAAACATCATGTGGAGGAACCTCTTACCTCAAGCATTGTACCAGATAGCAGTGGTATTGACCTTACGATTCAGGGGAAGCACAATCTTTGGTGTAGATGATAAGGTACAAGATACCTTGATCTTTAACACATTTGTGCTCTGCCAAGTCTTCAATGAATTCAATGCAAGGAAGCTTGAGAAGAAGAACGTTTTCAAGGGACTGCTCACCAACAAAATCTTTCTAGGGATCATTGCATTAATAATCGTTCTGCAGCTGGTGATGGTGGAACTTCTGAACAAATATGCAGATACGGAGAGGTTGAATTGGGGGCAATGGGGTGTATGTCTTGGAATCGCGGCCATGTCTTGGCCACTTGGTTGTGTTGTTAAGTGTCTACCTGTTCCCCAGAAACCTATCTTCAGCTATTGGGAGGTGAAGAAATATATAAGAACTCCGGTTAAACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

1003

Amino Acids

109.72

Weight (kDa)

6.62

Isoelectric Point (pI)

35.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	75 - 143	4.9e-10	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	200 - 294	1.8e-21	P-type ATPase actuator domain
Hydrolase	PF00702	417 - 738	2.4e-13	haloacid dehalogenase-like hydrolase
Cation_ATPase	PF13246	456 - 627	2.4e-27	P-type ATPase, cytoplasmic domain N
Cation_ATPase_C	PF00689	809 - 977	1.3e-47	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22910
fragaria_vesca	FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica	MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica	Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis	pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis	RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata	RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora	Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa	Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha	Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana	Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2408
Acc16I	TGCGCA	1 cut(s)	303
Acc36I	ACCTGC	1 cut(s)	2408
AccB1I	GGYRCC	3 cut(s)	42, 797, 2240
AccB7I	CCANNNNNTGG	4 cut(s)	223, 689, 1308, 2907
AccI	GTMKAC	3 cut(s)	1596, 2079, 2935
AccII	CGCG	1 cut(s)	2897
AciI	CCGC	4 cut(s)	30, 282, 1785, 2897
AclI	AACGTT	1 cut(s)	2748
AclWI	GGATC	2 cut(s)	1862, 2795
AcoI	YGGCCR	5 cut(s)	12, 1877, 2301, 2898, 2909
AcsI	RAATTY	2 cut(s)	1439, 2717
AcuI	CTGAAG	3 cut(s)	255, 2280, 2944
AdeI	CACNNNGTG	1 cut(s)	2480
AfaI	GTAC	6 cut(s)	19, 423, 818, 1614, 2600, 2667
AfiI	CCNNNNNNNGG	7 cut(s)	223, 689, 1089, 1308, 1848, 2095, 2907
AgeI	ACCGGT	1 cut(s)	1400
AhdI	GACNNNNNGTC	1 cut(s)	562
AjnI	CCWGG	2 cut(s)	1879, 1996
AjuI	GAANNNNNNNTTGG	6 cut(s)	344, 376, 627, 659, 2337, 2369
AleI	CACNNNNGTG	2 cut(s)	803, 2693
AloI	GAACNNNNNNTCC	6 cut(s)	67, 99, 663, 695, 2313, 2345
Alw21I	GWGCWC	5 cut(s)	453, 1655, 2264, 2485, 2700
Alw26I	GTCTC	2 cut(s)	991, 2225
Alw44I	GTGCAC	1 cut(s)	1651
AlwI	GGATC	2 cut(s)	1862, 2795
AlwNI	CAGNNNCTG	3 cut(s)	521, 1430, 2171
AoxI	GGCC	5 cut(s)	12, 1877, 2301, 2898, 2909
ApaLI	GTGCAC	1 cut(s)	1651
ApoI	RAATTY	2 cut(s)	1439, 2717
AseI	ATTAAT	1 cut(s)	2798
AsiGI	ACCGGT	1 cut(s)	1400
Asp700I	GAANNNNTTC	3 cut(s)	359, 1040, 2750
AspLEI	GCGC	1 cut(s)	304
AsuII	TTCGAA	1 cut(s)	326
AsuNHI	GCTAGC	1 cut(s)	931
AxyI	CCTNAGG	1 cut(s)	1672
BaeGI	GKGCMC	2 cut(s)	30, 1655
BalI	TGGCCA	3 cut(s)	14, 2303, 2911
BanI	GGYRCC	3 cut(s)	42, 797, 2240
BanII	GRGCYC	2 cut(s)	1241, 2264
BarI	GAAGNNNNNNTAC	2 cut(s)	983, 1015
BbsI	GAAGAC	3 cut(s)	1352, 1820, 2701
Bbv12I	GWGCWC	5 cut(s)	453, 1655, 2264, 2485, 2700
BccI	CCATC	7 cut(s)	72, 470, 683, 806, 1087, 1183, 2815
BceAI	ACGGC	2 cut(s)	1067, 2194
BcgI	CGANNNNNNTGC	2 cut(s)	475, 509
BciT130I	CCWGG	2 cut(s)	1881, 1998
BciVI	GTATCC	3 cut(s)	1501, 1792, 1980
BclI	TGATCA	4 cut(s)	1581, 1935, 2274, 2463
BcoDI	GTCTC	2 cut(s)	991, 2225
BfaI	CTAG	8 cut(s)	111, 164, 932, 962, 1413, 1643, 1743, 2783
BfmI	CTRYAG	5 cut(s)	617, 1104, 1629, 2496, 2810
BfuAI	ACCTGC	1 cut(s)	2408
BfuI	GTATCC	3 cut(s)	1501, 1792, 1980
Bme1390I	CCNGG	2 cut(s)	1881, 1998
BmeRI	GACNNNNNGTC	1 cut(s)	562
BmiI	GGNNCC	7 cut(s)	44, 799, 1803, 2242, 2427, 2550, 2579
BmrFI	CCNGG	2 cut(s)	1881, 1998
BmsI	GCATC	7 cut(s)	618, 816, 930, 1075, 1490, 1745, 2179
BmtI	GCTAGC	1 cut(s)	935
BpiI	GAAGAC	3 cut(s)	1352, 1820, 2701
BpmI	CTGGAG	1 cut(s)	1508
Bpu14I	TTCGAA	1 cut(s)	326
BpuEI	CTTGAG	4 cut(s)	276, 1976, 2574, 2756
BsaAI	YACGTR	3 cut(s)	1072, 1612, 2158
BsaBI	GATNNNNATC	1 cut(s)	1580
BsaI	GGTCTC	1 cut(s)	2225
BsaJI	CCNNGG	4 cut(s)	1017, 1083, 1326, 1997
BsaWI	WCCGGW	3 cut(s)	306, 1400, 2995
BsaXI	ACNNNNNCTCC	6 cut(s)	67, 97, 463, 493, 663, 693
Bsc4I	CCNNNNNNNGG	7 cut(s)	223, 689, 1089, 1308, 1848, 2095, 2907
Bse118I	RCCGGY	1 cut(s)	1400
Bse1I	ACTGG	8 cut(s)	15, 121, 133, 1012, 1145, 1435, 2176, 2443
Bse21I	CCTNAGG	1 cut(s)	1672
Bse3DI	GCAATG	6 cut(s)	1209, 1653, 1758, 2141, 2790, 2879
Bse8I	GATNNNNATC	1 cut(s)	1580
BseBI	CCWGG	2 cut(s)	1881, 1998
BseDI	CCNNGG	4 cut(s)	1017, 1083, 1326, 1997
BseGI	GGATG	7 cut(s)	921, 1098, 1699, 2085, 2105, 2287, 2340
BseJI	GATNNNNATC	1 cut(s)	1580
BseLI	CCNNNNNNNGG	7 cut(s)	223, 689, 1089, 1308, 1848, 2095, 2907
BseMI	GCAATG	6 cut(s)	1209, 1653, 1758, 2141, 2790, 2879
BseMII	CTCAG	4 cut(s)	197, 836, 1437, 1686
BseNI	ACTGG	8 cut(s)	15, 121, 133, 1012, 1145, 1435, 2176, 2443
BseRI	GAGGAG	2 cut(s)	1195, 1805
BseSI	GKGCMC	2 cut(s)	30, 1655
BsgI	GTGCAG	1 cut(s)	1944
Bsh1236I	CGCG	1 cut(s)	2897
BshFI	GGCC	5 cut(s)	14, 1879, 2303, 2900, 2911
BshNI	GGYRCC	3 cut(s)	42, 797, 2240
BshTI	ACCGGT	1 cut(s)	1400
BsiHKAI	GWGCWC	5 cut(s)	453, 1655, 2264, 2485, 2700
BsiSI	CCGG	3 cut(s)	307, 1401, 2996
BslFI	GGGAC	2 cut(s)	38, 2772
BslI	CCNNNNNNNGG	7 cut(s)	223, 689, 1089, 1308, 1848, 2095, 2907
BsmAI	GTCTC	2 cut(s)	991, 2225
BsmFI	GGGAC	2 cut(s)	38, 2772
BsnI	GGCC	5 cut(s)	14, 1879, 2303, 2900, 2911
Bso31I	GGTCTC	1 cut(s)	2225
Bsp119I	TTCGAA	1 cut(s)	326
Bsp1286I	GDGCHC	7 cut(s)	30, 453, 1241, 1655, 2264, 2485, 2700
BspACI	CCGC	4 cut(s)	30, 282, 1785, 2897
BspANI	GGCC	5 cut(s)	14, 1879, 2303, 2900, 2911
BspCNI	CTCAG	4 cut(s)	196, 835, 1436, 1685
BspFNI	CGCG	1 cut(s)	2897
BspLI	GGNNCC	7 cut(s)	44, 799, 1803, 2242, 2427, 2550, 2579
BspMAI	CTGCAG	3 cut(s)	1108, 1633, 2814
BspMI	ACCTGC	1 cut(s)	2408
BspOI	GCTAGC	1 cut(s)	935
BspPI	GGATC	2 cut(s)	1862, 2795
BspT104I	TTCGAA	1 cut(s)	326
BspT107I	GGYRCC	3 cut(s)	42, 797, 2240
BspTNI	GGTCTC	1 cut(s)	2225
BsrDI	GCAATG	6 cut(s)	1209, 1653, 1758, 2141, 2790, 2879
BsrFI	RCCGGY	1 cut(s)	1400
BsrI	ACTGG	8 cut(s)	15, 121, 133, 1012, 1145, 1435, 2176, 2443
BssAI	RCCGGY	1 cut(s)	1400
BssECI	CCNNGG	4 cut(s)	1017, 1083, 1326, 1997
BssT1I	CCWWGG	1 cut(s)	1017
Bst2UI	CCWGG	2 cut(s)	1881, 1998
Bst4CI	ACNGT	4 cut(s)	155, 1907, 2308, 2371
Bst6I	CTCTTC	1 cut(s)	2055
BstBAI	YACGTR	3 cut(s)	1072, 1612, 2158
BstBI	TTCGAA	1 cut(s)	326
BstC8I	GCNNGC	4 cut(s)	30, 382, 933, 1751
BstDEI	CTNAG	7 cut(s)	59, 183, 458, 822, 1364, 1423, 1672
BstDSI	CCRYGG	2 cut(s)	1083, 1326
BstEII	GGTNACC	1 cut(s)	1297
BstF5I	GGATG	7 cut(s)	921, 1098, 1699, 2085, 2105, 2287, 2340
BstFNI	CGCG	1 cut(s)	2897
BstHHI	GCGC	1 cut(s)	304
BstMAI	GTCTC	2 cut(s)	991, 2225
BstMWI	GCNNNNNNNGC	5 cut(s)	882, 1199, 1755, 2300, 2414
BstNI	CCWGG	2 cut(s)	1881, 1998
BstNSI	RCATGY	1 cut(s)	384
BstPI	GGTNACC	1 cut(s)	1297
BstSCI	CCNGG	2 cut(s)	1879, 1996
BstSFI	CTRYAG	5 cut(s)	617, 1104, 1629, 2496, 2810
BstSLI	GKGCMC	2 cut(s)	30, 1655
BstUI	CGCG	1 cut(s)	2897
BstV2I	GAAGAC	3 cut(s)	1352, 1820, 2701
BstX2I	RGATCY	1 cut(s)	1867
BstYI	RGATCY	1 cut(s)	1867
Bsu36I	CCTNAGG	1 cut(s)	1672
BsuI	GTATCC	3 cut(s)	1501, 1792, 1980
BsuRI	GGCC	5 cut(s)	14, 1879, 2303, 2900, 2911
BtgI	CCRYGG	2 cut(s)	1083, 1326
BtgZI	GCGATG	1 cut(s)	1768
BtsCI	GGATG	7 cut(s)	921, 1098, 1699, 2085, 2105, 2287, 2340
BtsI	GCAGTG	2 cut(s)	2172, 2616
BtsIMutI	CAGTG	8 cut(s)	144, 522, 1005, 1257, 2020, 2172, 2304, 2616
BveI	ACCTGC	1 cut(s)	2408
Cac8I	GCNNGC	4 cut(s)	30, 382, 933, 1751
CaiI	CAGNNNCTG	3 cut(s)	521, 1430, 2171
CfoI	GCGC	1 cut(s)	304
Cfr10I	RCCGGY	1 cut(s)	1400
Csp6I	GTAC	6 cut(s)	18, 422, 817, 1613, 2599, 2666
CspAI	ACCGGT	1 cut(s)	1400
CspCI	CAANNNNNGTGG	2 cut(s)	1101, 1136
CviQI	GTAC	6 cut(s)	18, 422, 817, 1613, 2599, 2666
DdeI	CTNAG	7 cut(s)	59, 183, 458, 822, 1364, 1423, 1672
DraIII	CACNNNGTG	1 cut(s)	2480
DriI	GACNNNNNGTC	1 cut(s)	562
EaeI	YGGCCR	5 cut(s)	12, 1877, 2301, 2898, 2909
Eam1104I	CTCTTC	1 cut(s)	2055
Eam1105I	GACNNNNNGTC	1 cut(s)	562
EarI	CTCTTC	1 cut(s)	2055
Ecl136II	GAGCTC	1 cut(s)	2262
Eco130I	CCWWGG	1 cut(s)	1017
Eco24I	GRGCYC	2 cut(s)	1241, 2264
Eco31I	GGTCTC	1 cut(s)	2225
Eco32I	GATATC	1 cut(s)	652
Eco53kI	GAGCTC	1 cut(s)	2262
Eco57I	CTGAAG	3 cut(s)	255, 2280, 2944
Eco81I	CCTNAGG	1 cut(s)	1672
Eco91I	GGTNACC	1 cut(s)	1297
EcoICRI	GAGCTC	1 cut(s)	2262
EcoO65I	GGTNACC	1 cut(s)	1297
EcoRI	GAATTC	1 cut(s)	2717
EcoRII	CCWGG	2 cut(s)	1879, 1996
EcoRV	GATATC	1 cut(s)	652
EcoT14I	CCWWGG	1 cut(s)	1017
EcoT22I	ATGCAT	1 cut(s)	1760
EcoT38I	GRGCYC	2 cut(s)	1241, 2264
ErhI	CCWWGG	1 cut(s)	1017
FalI	AAGNNNNNCTT	4 cut(s)	344, 376, 1455, 1487
FaqI	GGGAC	2 cut(s)	38, 2772
FauI	CCCGC	1 cut(s)	37
FauNDI	CATATG	1 cut(s)	1290
FbaI	TGATCA	4 cut(s)	1581, 1935, 2274, 2463
FblI	GTMKAC	3 cut(s)	1596, 2079, 2935
FokI	GGATG	7 cut(s)	908, 1105, 1706, 2072, 2092, 2294, 2327
FriOI	GRGCYC	2 cut(s)	1241, 2264
FspBI	CTAG	8 cut(s)	111, 164, 932, 962, 1413, 1643, 1743, 2783
FspI	TGCGCA	1 cut(s)	303
GlaI	GCGC	1 cut(s)	303
GsuI	CTGGAG	1 cut(s)	1508
HaeIII	GGCC	5 cut(s)	14, 1879, 2303, 2900, 2911
HapII	CCGG	3 cut(s)	307, 1401, 2996
HhaI	GCGC	1 cut(s)	304
Hin6I	GCGC	1 cut(s)	302
HinP1I	GCGC	1 cut(s)	302
HindIII	AAGCTT	3 cut(s)	269, 2120, 2732
HinfI	GANTC	6 cut(s)	728, 1285, 1372, 2527, 2628, 2892
HpaII	CCGG	3 cut(s)	307, 1401, 2996
Hpy166II	GTNNAC	9 cut(s)	899, 1142, 1597, 1653, 1924, 2080, 2332, 2458, 2936
Hpy188I	TCNGA	8 cut(s)	145, 602, 614, 671, 825, 2046, 2266, 2835
Hpy8I	GTNNAC	9 cut(s)	899, 1142, 1597, 1653, 1924, 2080, 2332, 2458, 2936
Hpy99I	CGWCG	1 cut(s)	845
HpyCH4III	ACNGT	4 cut(s)	155, 1907, 2308, 2371
HpyCH4IV	ACGT	4 cut(s)	1071, 1611, 2157, 2748
HpyF10VI	GCNNNNNNNGC	5 cut(s)	882, 1199, 1755, 2300, 2414
HpyF3I	CTNAG	7 cut(s)	59, 183, 458, 822, 1364, 1423, 1672
HpySE526I	ACGT	4 cut(s)	1071, 1611, 2157, 2748
HspAI	GCGC	1 cut(s)	302
Ksp22I	TGATCA	4 cut(s)	1581, 1935, 2274, 2463
LmnI	GCTCC	6 cut(s)	219, 1050, 1489, 1792, 2197, 2548
LweI	GCATC	7 cut(s)	618, 816, 930, 1075, 1490, 1745, 2179
MaeI	CTAG	8 cut(s)	111, 164, 932, 962, 1413, 1643, 1743, 2783
MaeII	ACGT	4 cut(s)	1071, 1611, 2157, 2748
MfeI	CAATTG	2 cut(s)	1113, 1764
MflI	RGATCY	1 cut(s)	1867
MhlI	GDGCHC	7 cut(s)	30, 453, 1241, 1655, 2264, 2485, 2700
MlsI	TGGCCA	3 cut(s)	14, 2303, 2911
MluNI	TGGCCA	3 cut(s)	14, 2303, 2911
MlyI	GAGTC	1 cut(s)	737
MmeI	TCCRAC	4 cut(s)	168, 449, 625, 2386
Mox20I	TGGCCA	3 cut(s)	14, 2303, 2911
Mph1103I	ATGCAT	1 cut(s)	1760
MroXI	GAANNNNTTC	3 cut(s)	359, 1040, 2750
MscI	TGGCCA	3 cut(s)	14, 2303, 2911
MseI	TTAA	8 cut(s)	662, 974, 1863, 2432, 2685, 2798, 2928, 3000
MslI	CAYNNNNRTG	4 cut(s)	506, 803, 1931, 2693
Msp20I	TGGCCA	3 cut(s)	14, 2303, 2911
MspA1I	CMGCKG	1 cut(s)	2815
MspI	CCGG	3 cut(s)	307, 1401, 2996
MspR9I	CCNGG	2 cut(s)	1881, 1998
MunI	CAATTG	2 cut(s)	1113, 1764
MvaI	CCWGG	2 cut(s)	1881, 1998
MvnI	CGCG	1 cut(s)	2897
MwoI	GCNNNNNNNGC	5 cut(s)	882, 1199, 1755, 2300, 2414
NdeI	CATATG	1 cut(s)	1290
NheI	GCTAGC	1 cut(s)	931
NlaIV	GGNNCC	7 cut(s)	44, 799, 1803, 2242, 2427, 2550, 2579
NmuCI	GTSAC	9 cut(s)	94, 749, 832, 1297, 1907, 1943, 2153, 2167, 2174
NsbI	TGCGCA	1 cut(s)	303
NsiI	ATGCAT	1 cut(s)	1760
NspI	RCATGY	1 cut(s)	384
NspV	TTCGAA	1 cut(s)	326
OliI	CACNNNNGTG	2 cut(s)	803, 2693
PaeI	GCATGC	1 cut(s)	384
PaqCI	CACCTGC	1 cut(s)	2408
PdmI	GAANNNNTTC	3 cut(s)	359, 1040, 2750
PfeI	GAWTC	5 cut(s)	1285, 1372, 2527, 2628, 2892
PflMI	CCANNNNNTGG	4 cut(s)	223, 689, 1308, 2907
PinAI	ACCGGT	1 cut(s)	1400
PleI	GAGTC	1 cut(s)	736
PpsI	GAGTC	1 cut(s)	736
Ppu21I	YACGTR	3 cut(s)	1072, 1612, 2158
PshBI	ATTAAT	1 cut(s)	2798
Psp124BI	GAGCTC	1 cut(s)	2264
Psp1406I	AACGTT	1 cut(s)	2748
Psp6I	CCWGG	2 cut(s)	1879, 1996
PspEI	GGTNACC	1 cut(s)	1297
PspGI	CCWGG	2 cut(s)	1879, 1996
PspN4I	GGNNCC	7 cut(s)	44, 799, 1803, 2242, 2427, 2550, 2579
PsrI	GAACNNNNNNTAC	2 cut(s)	1093, 1125
PstI	CTGCAG	3 cut(s)	1108, 1633, 2814
PstNI	CAGNNNCTG	3 cut(s)	521, 1430, 2171
PsuI	RGATCY	1 cut(s)	1867
PvuII	CAGCTG	1 cut(s)	2815
RsaI	GTAC	6 cut(s)	19, 423, 818, 1614, 2600, 2667
RsaNI	GTAC	6 cut(s)	18, 422, 817, 1613, 2599, 2666
RseI	CAYNNNNRTG	4 cut(s)	506, 803, 1931, 2693
SacI	GAGCTC	1 cut(s)	2264
SaqAI	TTAA	8 cut(s)	662, 974, 1863, 2432, 2685, 2798, 2928, 3000
SchI	GAGTC	1 cut(s)	737
ScrFI	CCNGG	2 cut(s)	1881, 1998
SduI	GDGCHC	7 cut(s)	30, 453, 1241, 1655, 2264, 2485, 2700
SfaNI	GCATC	7 cut(s)	618, 816, 930, 1075, 1490, 1745, 2179
SfcI	CTRYAG	5 cut(s)	617, 1104, 1629, 2496, 2810
SfuI	TTCGAA	1 cut(s)	326
SmiMI	CAYNNNNRTG	4 cut(s)	506, 803, 1931, 2693
SmlI	CTYRAG	4 cut(s)	291, 1991, 2589, 2735
SmoI	CTYRAG	4 cut(s)	291, 1991, 2589, 2735
SphI	GCATGC	1 cut(s)	384
SsiI	CCGC	4 cut(s)	30, 282, 1785, 2897
SspI	AATATT	1 cut(s)	630
SspMI	CTAG	8 cut(s)	111, 164, 932, 962, 1413, 1643, 1743, 2783
SstI	GAGCTC	1 cut(s)	2264
StyD4I	CCNGG	2 cut(s)	1879, 1996
StyI	CCWWGG	1 cut(s)	1017
TaaI	ACNGT	4 cut(s)	155, 1907, 2308, 2371
TaiI	ACGT	4 cut(s)	1074, 1614, 2160, 2751
TaqI	TCGA	5 cut(s)	326, 731, 989, 1375, 2028
TatI	WGTACW	1 cut(s)	421
TauI	GCSGC	1 cut(s)	2900
TfiI	GAWTC	5 cut(s)	1285, 1372, 2527, 2628, 2892
Tru1I	TTAA	8 cut(s)	662, 974, 1863, 2432, 2685, 2798, 2928, 3000
Tru9I	TTAA	8 cut(s)	662, 974, 1863, 2432, 2685, 2798, 2928, 3000
TscAI	CASTG	8 cut(s)	144, 522, 1012, 1264, 2020, 2172, 2304, 2616
TseFI	GTSAC	9 cut(s)	94, 749, 832, 1297, 1907, 1943, 2153, 2167, 2174
Tsp45I	GTSAC	9 cut(s)	94, 749, 832, 1297, 1907, 1943, 2153, 2167, 2174
TspDTI	ATGAA	8 cut(s)	391, 702, 863, 1298, 1307, 1406, 2341, 2730
TspGWI	ACGGA	5 cut(s)	468, 829, 2078, 2561, 2867
TspRI	CASTG	8 cut(s)	144, 522, 1012, 1264, 2020, 2172, 2304, 2616
Van91I	CCANNNNNTGG	4 cut(s)	223, 689, 1308, 2907
VneI	GTGCAC	1 cut(s)	1651
VspI	ATTAAT	1 cut(s)	2798
XapI	RAATTY	2 cut(s)	1439, 2717
XbaI	TCTAGA	1 cut(s)	110
XceI	RCATGY	1 cut(s)	384
XmiI	GTMKAC	3 cut(s)	1596, 2079, 2935
XmnI	GAANNNNTTC	3 cut(s)	359, 1040, 2750
XspI	CTAG	8 cut(s)	111, 164, 932, 962, 1413, 1643, 1743, 2783
Zsp2I	ATGCAT	1 cut(s)	1760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.