Rmu_sc0002357.1_g000035

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002357.1
Physical Location & Seq
Reverse (-)
120336 .. 123449
3114 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002357.1_g000035.1.cds

Sequence Viewer

Length: 2928 bp
atgagtaggtcatccttcagtaccctgcatggaaaattgggaagcacagttgaacataccaactccacattcatatctcgcacactctcttactccattgttagcgtcgagccagtctcggtcccagccgttaatggattccaagcagaccaagaaagcctcactgagcttgtgaagaagaaaaatctcaaggagctcttggagcttggaggggttgaaaaagtagcatcagctctcaaaactgatgcagagcatggaatcaatggtgatgatgctaaagatattgcacgaagacacgaagcatttggttccaatacatacaagaaaccgccaacgcaaggattcctccattttgtgtgggaagccttcaaagacctcacaagcctaatcctcttgggatgtgccgcgctttctcttggtgtcggcatcaaagaacatggattcaaagatggctggattgacggtggaagcagttgtctcgctgtcattctggtaatttctgtttctgctattagcaattacagtcagagcagacggtttgaggctgacaagctgtcgaaagtcagcaacaatctccaaattgaggctgtgagaaatggaaggcgcatgcagatttccataattaaaattgtggtaggtgatgtcatttgtttgaagaatggagaccaagttccagctgatggattgcttttagatggtcattctttatcagtagatgaatcaagcatgacaggggagagtgaccatgctgaggtaagtgtcactgagaatcctttcttgttctctgggactaaaatcgcttatggtcatggtcgcatgctcgtcacgtcagtcgggatgaacacgaactggggtgatatgatgagccaaaccagccaagagaccagtgaaaagacacctttgcaagcacgtctagacaagctaacatcgtcaatgcataaagttcgtttggcatttgctttttttgtccttgtacacatgttggtccgatacttcactgggaatacagaggatgagaatggaaacaaggagtacaatggaaggaaaacgaagtctgatgacataataaaagctatcattggaattgtaccagctgcacttacaattgttgaggtggcaattccagaaggtctaccattagctgtgactctcactcttgcttattccgtgaagagaatgatggccgataatgcaatggtgcggaagctctctgattgtgagaccatgggatcagctacaacaatttgtactgacaaaacaggcactctgaccatgaaccagatgaaggtgacgaagttttggttagggaaagaatgtgtggaagaagaagcttattcatctatttctccgtatgttctcaactttatccaagaaggggtttctctcaacacaactggcagtgtgtacaggcctagcttggattccgaaattgagatctctggcagtcccactgaaaaggctattctttcatgggtagtacaagggttgaagataaatatggaggaagtggtgaagagctgtagcattctccacgtcgaagcctttaattcgaagaagaaacaaagtggagttctggtgaagagaaaggcagacaactcaatccatgtacacaggaaaggagcagcagaaatgatactagcaatgtgtacaagttactatgatgcctctggaactgttaaggatatggattacaatgaaaaaatgaacttcgagcagattatgcaaggtatgggagccgacagcctcagatgcatcgcattcgcacataaagaagttccagctgaggagcaagttgaaggagaccagaaagttgtgctaaaggaagatggattgaccctattgggacttgtgggccttaaagatccatgtcgtccaggtgtgagaaaagcagttgaagattgccaatatgcaggggtgaacgtcaaaatgattaccggagacaatgttttcaccgcaaaagccatagccactgagtgtgggatactcaggcctggtcaggacatgctcggagcagtgatagaaggtgtcgaatttcgcaactacacggcagaagagagaatggagaaagttgagaaaattgctgtgatggcaaggtcttctccgtttgataagcttctaatggtgcaatgcttgaaacagaaaggtcatgtagttgcagtgaccggtgatggtaccaatgatgcaccggcactgaaagaagctgatataggactttctatggggattcaaggaacagaagtggctaaagggagctcagatattgtgatcatggatgataactttgcttcagttgcgacaattttgatgtggggaagatgtgtgtacaataatatccagaagttcatccaattccaactcacagtcaatgttgcagctcttgtgatcaactttgttgcggcagtttcagcaggtcaagtcccattaacagcagttcagttattgtgggtcaacttgatcatggacatacttgtagctcttgctcttgccacagaaaaaccgacaagagaacttatggagaagccaccagtgggaaggacggcacctctcatcacaaacatcatgggcaaagcaatctttggtgtcagtgataaggtgaaggacacattgatcttcaacacttttgtgctttgccaggtgttcaatgagttcaatgcgaggaagctagaaaagaagaatgtggtcaagggaatacataccgataagttgttcatggggatcattgcagtgacaattgttcttcaggtcgtgatggtggaggttctcaagaaatttgcagatacagagaggttgaattggggacaatggggtgtatgcatagggattgcagttatctcttggccaattggttggctagtcaagtctatacctgttccacagaaacccattttcagctatctgaagatgaagaaaaataagcaccccagatga

Protein Analysis

975

Amino Acids

106.63

Weight (kDa)

7.01

Isoelectric Point (pI)

29.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2399
Acc65I GGTACC 1 cut(s) 2171
AccB1I GGYRCC 2 cut(s) 2171, 2539
AccB7I CCANNNNNTGG 1 cut(s) 680
AccI GTMKAC 1 cut(s) 1132
AccII CGCG 1 cut(s) 407
AciI CCGC 5 cut(s) 329, 405, 1201, 1953, 2396
AclWI GGATC 3 cut(s) 1237, 1856, 2723
AcoI YGGCCR 2 cut(s) 1182, 2837
AcsI RAATTY 2 cut(s) 2030, 2768
AcuI CTGAAG 3 cut(s) 2271, 2723, 2918
AdeI CACNNNGTG 1 cut(s) 1974
AfiI CCNNNNNNNGG 7 cut(s) 338, 583, 680, 751, 1285, 1375, 2528
AflIII ACRYGT 1 cut(s) 978
AgeI ACCGGT 1 cut(s) 2162
AhdI GACNNNNNGTC 1 cut(s) 553
AjiI CACGTC 3 cut(s) 828, 911, 1534
AjnI CCWGG 3 cut(s) 1873, 1990, 2631
AjuI GAANNNNNNNTTGG 2 cut(s) 53, 85
AleI CACNNNNGTG 1 cut(s) 2621
AloI GAACNNNNNNTCC 2 cut(s) 654, 686
Alw21I GWGCWC 2 cut(s) 198, 2255
Alw26I GTCTC 7 cut(s) 121, 482, 657, 875, 1214, 1794, 1932
AlwI GGATC 3 cut(s) 1237, 1856, 2723
AoxI GGCC 5 cut(s) 1182, 1409, 1852, 1988, 2837
ApeKI GCWGC 3 cut(s) 1094, 1622, 2372
ApoI RAATTY 2 cut(s) 2030, 2768
AsiGI ACCGGT 1 cut(s) 2162
Asp700I GAANNNNTTC 1 cut(s) 773
Asp718I GGTACC 1 cut(s) 2171
AspLEI GCGC 2 cut(s) 409, 606
AspS9I GGNCC 3 cut(s) 121, 985, 1852
AsuII TTCGAA 1 cut(s) 1550
AvaII GGWCC 2 cut(s) 121, 985
BalI TGGCCA 1 cut(s) 2839
BanI GGYRCC 2 cut(s) 2171, 2539
BanII GRGCYC 2 cut(s) 198, 2255
BbsI GAAGAC 2 cut(s) 298, 2088
Bbv12I GWGCWC 2 cut(s) 198, 2255
BbvCI CCTCAGC 2 cut(s) 750, 1782
BbvI GCAGC 3 cut(s) 1081, 1634, 2384
BccI CCATC 8 cut(s) 443, 674, 689, 1174, 1820, 2080, 2162, 2743
BceAI ACGGC 3 cut(s) 113, 2061, 2553
BcgI CGANNNNNNTGC 6 cut(s) 460, 494, 926, 960, 1741, 1775
BciT130I CCWGG 3 cut(s) 1875, 1992, 2633
BciVI GTATCC 1 cut(s) 1974
BclI TGATCA 3 cut(s) 2265, 2382, 2454
BcoDI GTCTC 7 cut(s) 121, 482, 657, 875, 1214, 1794, 1932
BfaI CTAG 5 cut(s) 914, 1413, 1637, 2663, 2852
BfmI CTRYAG 1 cut(s) 1519
BfuAI ACCTGC 1 cut(s) 2399
BfuI GTATCC 1 cut(s) 1974
BglII AGATCT 1 cut(s) 1434
BisI GCNGC 5 cut(s) 405, 1095, 1623, 2373, 2397
BlsI GCNGC 5 cut(s) 406, 1096, 1624, 2374, 2398
Bme1390I CCNGG 3 cut(s) 1875, 1992, 2633
Bme18I GGWCC 2 cut(s) 121, 985
BmeRI GACNNNNNGTC 1 cut(s) 553
BmgBI CACGTC 3 cut(s) 828, 911, 1534
BmgT120I GGNCC 3 cut(s) 121, 985, 1852
BmiI GGNNCC 5 cut(s) 123, 310, 1735, 2173, 2541
BmrFI CCNGG 3 cut(s) 1875, 1992, 2633
BmrI ACTGGG 2 cut(s) 859, 1008
BmsI GCATC 8 cut(s) 235, 236, 262, 435, 1651, 1739, 1761, 2170
BmuI ACTGGG 2 cut(s) 859, 1008
BpiI GAAGAC 2 cut(s) 298, 2088
BplI GAGNNNNNCTC 2 cut(s) 101, 133
Bpu10I CCTNAGC 2 cut(s) 750, 1782
Bpu14I TTCGAA 1 cut(s) 1550
BpuEI CTTGAG 2 cut(s) 173, 2747
BsaI GGTCTC 4 cut(s) 657, 875, 1214, 1794
BsaJI CCNNGG 1 cut(s) 1224
BsaWI WCCGGW 2 cut(s) 1934, 2162
BsaXI ACNNNNNCTCC 6 cut(s) 654, 684, 1560, 1590, 1929, 1959
Bsc4I CCNNNNNNNGG 7 cut(s) 338, 583, 680, 751, 1285, 1375, 2528
Bse118I RCCGGY 2 cut(s) 2162, 2185
Bse1I ACTGG 6 cut(s) 113, 854, 885, 1003, 1399, 2525
Bse3DI GCAATG 4 cut(s) 1200, 1647, 2132, 2718
BseBI CCWGG 3 cut(s) 1875, 1992, 2633
BseDI CCNNGG 1 cut(s) 1224
BseGI GGATG 6 cut(s) 11, 404, 843, 1018, 2278, 2343
BseLI CCNNNNNNNGG 7 cut(s) 338, 583, 680, 751, 1285, 1375, 2528
BseMI GCAATG 4 cut(s) 1200, 1647, 2132, 2718
BseMII CTCAG 8 cut(s) 156, 741, 756, 1759, 1773, 1962, 1999, 2268
BseNI ACTGG 6 cut(s) 113, 854, 885, 1003, 1399, 2525
BseRI GAGGAG 1 cut(s) 1799
BseXI GCAGC 3 cut(s) 1081, 1634, 2384
BseYI CCCAGC 1 cut(s) 124
BsgI GTGCAG 1 cut(s) 1080
Bsh1236I CGCG 1 cut(s) 407
BshFI GGCC 5 cut(s) 1184, 1411, 1854, 1990, 2839
BshNI GGYRCC 2 cut(s) 2171, 2539
BshTI ACCGGT 1 cut(s) 2162
BsiHKAI GWGCWC 2 cut(s) 198, 2255
BsiSI CCGG 3 cut(s) 1935, 2163, 2186
BslFI GGGAC 6 cut(s) 107, 802, 1431, 1857, 2402, 2811
BslI CCNNNNNNNGG 7 cut(s) 338, 583, 680, 751, 1285, 1375, 2528
BsmAI GTCTC 7 cut(s) 121, 482, 657, 875, 1214, 1794, 1932
BsmFI GGGAC 6 cut(s) 107, 802, 1431, 1857, 2402, 2811
BsmI GAATGC 2 cut(s) 1524, 1757
BsnI GGCC 5 cut(s) 1184, 1411, 1854, 1990, 2839
Bso31I GGTCTC 4 cut(s) 657, 875, 1214, 1794
Bsp119I TTCGAA 1 cut(s) 1550
Bsp1286I GDGCHC 2 cut(s) 198, 2255
Bsp1407I TGTACA 5 cut(s) 973, 1404, 1606, 1646, 2322
Bsp143I GATC 8 cut(s) 1229, 1434, 1861, 2265, 2382, 2454, 2607, 2715
Bsp19I CCATGG 1 cut(s) 1224
BspACI CCGC 5 cut(s) 329, 405, 1201, 1953, 2396
BspANI GGCC 5 cut(s) 1184, 1411, 1854, 1990, 2839
BspCNI CTCAG 8 cut(s) 157, 742, 757, 1758, 1774, 1963, 1998, 2267
BspFNI CGCG 1 cut(s) 407
BspLI GGNNCC 5 cut(s) 123, 310, 1735, 2173, 2541
BspMI ACCTGC 1 cut(s) 2399
BspPI GGATC 3 cut(s) 1237, 1856, 2723
BspQI GCTCTTC 1 cut(s) 1508
BspT104I TTCGAA 1 cut(s) 1550
BspT107I GGYRCC 2 cut(s) 2171, 2539
BspTNI GGTCTC 4 cut(s) 657, 875, 1214, 1794
BsrDI GCAATG 4 cut(s) 1200, 1647, 2132, 2718
BsrFI RCCGGY 2 cut(s) 2162, 2185
BsrGI TGTACA 5 cut(s) 973, 1404, 1606, 1646, 2322
BsrI ACTGG 6 cut(s) 113, 854, 885, 1003, 1399, 2525
BssAI RCCGGY 2 cut(s) 2162, 2185
BssECI CCNNGG 1 cut(s) 1224
BssMI GATC 8 cut(s) 1229, 1434, 1861, 2265, 2382, 2454, 2607, 2715
BssT1I CCWWGG 1 cut(s) 1224
Bst2UI CCWGG 3 cut(s) 1875, 1992, 2633
Bst4CI ACNGT 6 cut(s) 49, 464, 524, 537, 1675, 2362
Bst6I CTCTTC 4 cut(s) 1166, 1508, 1574, 2046
BstAPI GCANNNNNTGC 1 cut(s) 1720
BstAUI TGTACA 5 cut(s) 973, 1404, 1606, 1646, 2322
BstBI TTCGAA 1 cut(s) 1550
BstC8I GCNNGC 3 cut(s) 608, 818, 906
BstDEI CTNAG 8 cut(s) 165, 750, 765, 1745, 1782, 1971, 1985, 2254
BstDSI CCRYGG 1 cut(s) 1224
BstF5I GGATG 6 cut(s) 11, 404, 843, 1018, 2278, 2343
BstFNI CGCG 1 cut(s) 407
BstHHI GCGC 2 cut(s) 409, 606
BstKTI GATC 8 cut(s) 1232, 1437, 1864, 2268, 2385, 2457, 2610, 2718
BstMAI GTCTC 7 cut(s) 121, 482, 657, 875, 1214, 1794, 1932
BstMBI GATC 8 cut(s) 1229, 1434, 1861, 2265, 2382, 2454, 2607, 2715
BstMWI GCNNNNNNNGC 8 cut(s) 202, 873, 1190, 1720, 1749, 2087, 2291, 2405
BstNI CCWGG 3 cut(s) 1875, 1992, 2633
BstNSI RCATGY 4 cut(s) 610, 820, 982, 2005
BstSCI CCNGG 3 cut(s) 1873, 1990, 2631
BstSFI CTRYAG 1 cut(s) 1519
BstUI CGCG 1 cut(s) 407
BstV1I GCAGC 3 cut(s) 1081, 1634, 2384
BstV2I GAAGAC 2 cut(s) 298, 2088
BstX2I RGATCY 2 cut(s) 1434, 1861
BstXI CCANNNNNNTGG 1 cut(s) 2847
BstYI RGATCY 2 cut(s) 1434, 1861
BsuI GTATCC 1 cut(s) 1974
BsuRI GGCC 5 cut(s) 1184, 1411, 1854, 1990, 2839
BtgI CCRYGG 1 cut(s) 1224
BtgZI GCGATG 1 cut(s) 1738
BtrI CACGTC 3 cut(s) 828, 911, 1534
BtsCI GGATG 6 cut(s) 11, 404, 843, 1018, 2278, 2343
BtsI GCAGTG 4 cut(s) 1405, 2019, 2163, 2730
BveI ACCTGC 1 cut(s) 2399
Cac8I GCNNGC 3 cut(s) 608, 818, 906
CfoI GCGC 2 cut(s) 409, 606
Cfr10I RCCGGY 2 cut(s) 2162, 2185
Cfr13I GGNCC 3 cut(s) 121, 985, 1852
CseI GACGC 1 cut(s) 94
CspAI ACCGGT 1 cut(s) 2162
DdeI CTNAG 8 cut(s) 165, 750, 765, 1745, 1782, 1971, 1985, 2254
DpnI GATC 8 cut(s) 1231, 1436, 1863, 2267, 2384, 2456, 2609, 2717
DpnII GATC 8 cut(s) 1229, 1434, 1861, 2265, 2382, 2454, 2607, 2715
DraIII CACNNNGTG 1 cut(s) 1974
DriI GACNNNNNGTC 1 cut(s) 553
EaeI YGGCCR 2 cut(s) 1182, 2837
Eam1104I CTCTTC 4 cut(s) 1166, 1508, 1574, 2046
Eam1105I GACNNNNNGTC 1 cut(s) 553
EarI CTCTTC 4 cut(s) 1166, 1508, 1574, 2046
Ecl136II GAGCTC 2 cut(s) 196, 2253
Eco130I CCWWGG 1 cut(s) 1224
Eco147I AGGCCT 2 cut(s) 1411, 1990
Eco24I GRGCYC 2 cut(s) 198, 2255
Eco31I GGTCTC 4 cut(s) 657, 875, 1214, 1794
Eco47I GGWCC 2 cut(s) 121, 985
Eco53kI GAGCTC 2 cut(s) 196, 2253
Eco57I CTGAAG 3 cut(s) 2271, 2723, 2918
EcoICRI GAGCTC 2 cut(s) 196, 2253
EcoRII CCWGG 3 cut(s) 1873, 1990, 2631
EcoT14I CCWWGG 1 cut(s) 1224
EcoT22I ATGCAT 3 cut(s) 939, 1754, 2816
EcoT38I GRGCYC 2 cut(s) 198, 2255
ErhI CCWWGG 1 cut(s) 1224
FalI AAGNNNNNCTT 2 cut(s) 182, 214
FaqI GGGAC 6 cut(s) 107, 802, 1431, 1857, 2402, 2811
FbaI TGATCA 3 cut(s) 2265, 2382, 2454
FblI GTMKAC 1 cut(s) 1132
Fnu4HI GCNGC 5 cut(s) 405, 1095, 1623, 2373, 2397
FokI GGATG 5 cut(s) 411, 850, 1025, 2285, 2330
FriOI GRGCYC 2 cut(s) 198, 2255
Fsp4HI GCNGC 5 cut(s) 405, 1095, 1623, 2373, 2397
FspBI CTAG 5 cut(s) 914, 1413, 1637, 2663, 2852
GlaI GCGC 2 cut(s) 408, 605
GluI GCNGC 5 cut(s) 405, 1095, 1623, 2373, 2397
GsaI CCCAGC 1 cut(s) 128
HaeIII GGCC 5 cut(s) 1184, 1411, 1854, 1990, 2839
HapII CCGG 3 cut(s) 1935, 2163, 2186
HgaI GACGC 1 cut(s) 94
HhaI GCGC 2 cut(s) 409, 606
Hin6I GCGC 2 cut(s) 407, 604
HinP1I GCGC 2 cut(s) 407, 604
HincII GTYRAC 1 cut(s) 2449
HindII GTYRAC 1 cut(s) 2449
HindIII AAGCTT 2 cut(s) 1329, 2111
HinfI GANTC 9 cut(s) 138, 258, 342, 441, 719, 769, 1147, 1421, 2224
HpaII CCGG 3 cut(s) 1935, 2163, 2186
Hpy166II GTNNAC 8 cut(s) 976, 1133, 1405, 1609, 1647, 1918, 2323, 2449
Hpy188III TCNNGA 8 cut(s) 835, 914, 1124, 1668, 1997, 2335, 2746, 2764
Hpy8I GTNNAC 8 cut(s) 976, 1133, 1405, 1609, 1647, 1918, 2323, 2449
Hpy99I CGWCG 2 cut(s) 110, 1538
HpyCH4III ACNGT 6 cut(s) 49, 464, 524, 537, 1675, 2362
HpyCH4IV ACGT 4 cut(s) 827, 910, 1533, 1920
HpyF10VI GCNNNNNNNGC 8 cut(s) 202, 873, 1190, 1720, 1749, 2087, 2291, 2405
HpyF3I CTNAG 8 cut(s) 165, 750, 765, 1745, 1782, 1971, 1985, 2254
HpySE526I ACGT 4 cut(s) 827, 910, 1533, 1920
HspAI GCGC 2 cut(s) 407, 604
KpnI GGTACC 1 cut(s) 2175
Ksp22I TGATCA 3 cut(s) 2265, 2382, 2454
Kzo9I GATC 8 cut(s) 1229, 1434, 1861, 2265, 2382, 2454, 2607, 2715
LguI GCTCTTC 1 cut(s) 1508
LmnI GCTCC 7 cut(s) 193, 202, 1619, 1733, 1786, 2009, 2250
Lsp1109I GCAGC 3 cut(s) 1081, 1634, 2384
LweI GCATC 8 cut(s) 235, 236, 262, 435, 1651, 1739, 1761, 2170
MaeI CTAG 5 cut(s) 914, 1413, 1637, 2663, 2852
MaeII ACGT 4 cut(s) 827, 910, 1533, 1920
MaeIII GTNAC 8 cut(s) 740, 760, 823, 1144, 1288, 1652, 2158, 2725
MalI GATC 8 cut(s) 1231, 1436, 1863, 2267, 2384, 2456, 2609, 2717
MboI GATC 8 cut(s) 1229, 1434, 1861, 2265, 2382, 2454, 2607, 2715
MfeI CAATTG 3 cut(s) 1104, 2730, 2841
MflI RGATCY 2 cut(s) 1434, 1861
MhlI GDGCHC 2 cut(s) 198, 2255
MlsI TGGCCA 1 cut(s) 2839
MluNI TGGCCA 1 cut(s) 2839
MlyI GAGTC 1 cut(s) 1141
MmeI TCCRAC 1 cut(s) 2377
Mox20I TGGCCA 1 cut(s) 2839
Mph1103I ATGCAT 3 cut(s) 939, 1754, 2816
MroXI GAANNNNTTC 1 cut(s) 773
MscI TGGCCA 1 cut(s) 2839
MseI TTAA 6 cut(s) 132, 624, 1545, 1677, 1857, 2423
MslI CAYNNNNRTG 2 cut(s) 2621, 2723
Msp20I TGGCCA 1 cut(s) 2839
MspA1I CMGCKG 3 cut(s) 677, 1094, 1781
MspI CCGG 3 cut(s) 1935, 2163, 2186
MspR9I CCNGG 3 cut(s) 1875, 1992, 2633
MunI CAATTG 3 cut(s) 1104, 2730, 2841
Mva1269I GAATGC 2 cut(s) 1524, 1757
MvaI CCWGG 3 cut(s) 1875, 1992, 2633
MvnI CGCG 1 cut(s) 407
MwoI GCNNNNNNNGC 8 cut(s) 202, 873, 1190, 1720, 1749, 2087, 2291, 2405
NcoI CCATGG 1 cut(s) 1224
NdeII GATC 8 cut(s) 1229, 1434, 1861, 2265, 2382, 2454, 2607, 2715
NlaIV GGNNCC 5 cut(s) 123, 310, 1735, 2173, 2541
NmuCI GTSAC 7 cut(s) 740, 760, 823, 1144, 1288, 2158, 2725
NsiI ATGCAT 3 cut(s) 939, 1754, 2816
NspI RCATGY 4 cut(s) 610, 820, 982, 2005
NspV TTCGAA 1 cut(s) 1550
OliI CACNNNNGTG 1 cut(s) 2621
PaeI GCATGC 2 cut(s) 610, 820
PceI AGGCCT 2 cut(s) 1411, 1990
PciI ACATGT 1 cut(s) 978
PciSI GCTCTTC 1 cut(s) 1508
PctI GAATGC 2 cut(s) 1524, 1757
PdmI GAANNNNTTC 1 cut(s) 773
PfeI GAWTC 8 cut(s) 138, 258, 342, 441, 719, 769, 1421, 2224
PflMI CCANNNNNTGG 1 cut(s) 680
PinAI ACCGGT 1 cut(s) 2162
PkrI GCNGC 5 cut(s) 406, 1096, 1624, 2374, 2398
PleI GAGTC 1 cut(s) 1141
PpsI GAGTC 1 cut(s) 1141
PscI ACATGT 1 cut(s) 978
Psp124BI GAGCTC 2 cut(s) 198, 2255
Psp6I CCWGG 3 cut(s) 1873, 1990, 2631
PspFI CCCAGC 1 cut(s) 124
PspGI CCWGG 3 cut(s) 1873, 1990, 2631
PspN4I GGNNCC 5 cut(s) 123, 310, 1735, 2173, 2541
PspPI GGNCC 3 cut(s) 121, 985, 1852
PsuI RGATCY 2 cut(s) 1434, 1861
PvuII CAGCTG 3 cut(s) 677, 1094, 1781
RseI CAYNNNNRTG 2 cut(s) 2621, 2723
SacI GAGCTC 2 cut(s) 198, 2255
SapI GCTCTTC 1 cut(s) 1508
SaqAI TTAA 6 cut(s) 132, 624, 1545, 1677, 1857, 2423
SatI GCNGC 5 cut(s) 405, 1095, 1623, 2373, 2397
Sau3AI GATC 8 cut(s) 1229, 1434, 1861, 2265, 2382, 2454, 2607, 2715
Sau96I GGNCC 3 cut(s) 121, 985, 1852
SchI GAGTC 1 cut(s) 1141
ScrFI CCNGG 3 cut(s) 1875, 1992, 2633
SduI GDGCHC 2 cut(s) 198, 2255
SfaNI GCATC 8 cut(s) 235, 236, 262, 435, 1651, 1739, 1761, 2170
SfcI CTRYAG 1 cut(s) 1519
SfuI TTCGAA 1 cut(s) 1550
SinI GGWCC 2 cut(s) 121, 985
SmiMI CAYNNNNRTG 2 cut(s) 2621, 2723
SmlI CTYRAG 2 cut(s) 188, 2762
SmoI CTYRAG 2 cut(s) 188, 2762
SphI GCATGC 2 cut(s) 610, 820
SseBI AGGCCT 2 cut(s) 1411, 1990
SsiI CCGC 5 cut(s) 329, 405, 1201, 1953, 2396
SspMI CTAG 5 cut(s) 914, 1413, 1637, 2663, 2852
SstI GAGCTC 2 cut(s) 198, 2255
StuI AGGCCT 2 cut(s) 1411, 1990
StyD4I CCNGG 3 cut(s) 1873, 1990, 2631
StyI CCWWGG 1 cut(s) 1224
TaaI ACNGT 6 cut(s) 49, 464, 524, 537, 1675, 2362
TaiI ACGT 4 cut(s) 830, 913, 1536, 1923
TaqI TCGA 6 cut(s) 108, 557, 1536, 1550, 1710, 2028
TaqII GACCGA 1 cut(s) 109
TatI WGTACW 8 cut(s) 973, 1032, 1247, 1404, 1477, 1606, 1646, 2322
TauI GCSGC 2 cut(s) 407, 2399
TfiI GAWTC 8 cut(s) 138, 258, 342, 441, 719, 769, 1421, 2224
Tru1I TTAA 6 cut(s) 132, 624, 1545, 1677, 1857, 2423
Tru9I TTAA 6 cut(s) 132, 624, 1545, 1677, 1857, 2423
TseFI GTSAC 7 cut(s) 740, 760, 823, 1144, 1288, 2158, 2725
TseI GCWGC 3 cut(s) 1094, 1622, 2372
Tsp45I GTSAC 7 cut(s) 740, 760, 823, 1144, 1288, 2158, 2725
TspGWI ACGGA 3 cut(s) 1156, 1338, 2091
Van91I CCANNNNNTGG 1 cut(s) 680
VpaK11BI GGWCC 2 cut(s) 121, 985
XapI RAATTY 2 cut(s) 2030, 2768
XbaI TCTAGA 1 cut(s) 913
XceI RCATGY 4 cut(s) 610, 820, 982, 2005
XmiI GTMKAC 1 cut(s) 1132
XmnI GAANNNNTTC 1 cut(s) 773
XspI CTAG 5 cut(s) 914, 1413, 1637, 2663, 2852
Zsp2I ATGCAT 3 cut(s) 939, 1754, 2816
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.