Prupe.1G023300_v2.0.a1

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
1610977 .. 1614066
3090 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G023300.1

Sequence Viewer

Length: 3090 bp
ATGTCGACCACCCTGCATGCGAAACTTGGGTGCATTGAAATTGCGTTGCTTTTTGCTGTTCCAAAAAACACTCTTACCAAACACCAAAGAAAATGGCATTCTGCTTTTGCAACAATCTACTGCTCCAGAGCCTTCAACCTTTCTTCTCCATCCAAACCCAAATTCACAAACACCAAAATACCTCGCTCTCCCTCTTATGCCACTCTTACTGTCGAGCCAGATAATGAGTTTGAAATTGATCAAACCACCCTCACTTACCTTGTCAAGGAGAGAAGCCTCAACCAGCTCCGGGAGCTGGGAGGGGCTGAAGAAATAGCATCAGCTCTCAAAACTGATGCAGAGCATGGAATCCATGGCTATGGTGAGGCTCAAGACATTGCCAAAAGAGTTGAAGCCTTTGGCTCAAACACATACATGAAGCCACCAGCAAAAGGGTTCTTCCATTTTGTTTGGGAAGCTTTTAAAGACCTCACAATTATCATCCTCTTAGGCTGTGCTGCACTCTCTCTTGGTCTCGGGATCAAAGTGCATGGCCTTAAAGAAGGCTGGATCGATGGTGGAAGCATACTTATCGCAATCATTCTGGTGATTTCTGTGTCGGCTGTAAGTAATTACAGGCAGAACAGGCAGTTTGATAAGTTATCAAAAGTCAGCGACAACGTCCAAATTGAAGCTGTGAGAGGTGGCAGGCGCCAACAGATTTCAATATTCGATATTGTTGTTGGCGATGTCATTTGCTTGAAGATTGGAGATCAAGTTCCAGCTGACGGGTTGTTTCTTGATGGCCATTCATTACAAGTAGATGAATCAAGCATGACGGGGGAAAGTGACCATGTGGAAATAAATCAAACCCAAAATCCGTTCTTGTTCTCTGGCACCAAGGTGGCTGATGGCTACGCTCGGATGCTTGTAACTTCTGTGGGCATGAACACAACTTGGGGTGAAATGATGAGCCAAATCAGCCGTGACACAAATGAACAGACGCCTTTACAAGCTCGCCTCAACAAGCTAACTTCATCAATTGGTAAAGTTGGGTTGGTTGTTGCTTTTCTAGTGCTCATTGTCTTGTCAGTTAGATACTTCACAGGAAATACACAGGATGAGAATGGAAATCAGGAGTATAATGGCAGCAAGACCAAAGTTGATGACATATTAAACGCGGTCGTTGAGATTGTAGCAGCTGCAGTTACAATTGTTGTGGTGGCAATTCCAGAAGGCTTGCCTCTAGCTGTGACTCTGACTCTTGCTTATTCCATGAAGAGAATGATGGTTGATAAAGCAATGGTGAGGAAGCTCTCTGCTTGTGAGACCATGGGCTCTGCTACCGTCATTTGTACTGACAAAACAGGCACTCTCACCATGAATGAAATGAAGGTGACTAAGTTTTGGTTGGGTGAAGAACCCGTGGCAGAGGAAGCTTTTTCATCTATATCTCCATATGTTCTTAATTTGATCCAAGAAGGGGTTGCTCTGAATACAACTGGTAGTGTATACAGGCCTAGTTCCGATTCAGAAATTGAAATCTCAGGCAGTCCTACTGAGAAGGCTATTCTTTCATGGGCGGTACATGGATCGAAGATGGATATGCAGAAAGTGGTGAAGAGTTGTAGCATTCTGTACGTTGAGGCCTTCAATTCACAGAAGAAACGAAGTGGGGTTTTGATGAAGAGGAAGGCTGACAACAATACAAGTCAAGCACATTGGAAAGGAGCTGCTGAGATGATACTAGCAATGTGCACAAGTTACTACAATGCCTCTGGACTTGTTATAAATATGGATGACAATGCAAAAATGAGATTTGAGCAGATTATTCAAGGTATGGCAGCTAGCAGCCTCAGATGCATTGCATTTGCGCATAAAGAAATTCCAGCAGAGGAGCAAGTGGATGAACGAGACCACAAAGCTTTGCTAAAAGAAGATGGATTGACTCTATTAGGACTTGTTGGTCTTAAAGATCCATGCCGTCCCGGGGTGAAGAAAGCAGTTGGAGACTGTCAATATGCAGGGGTAAATGTCAAAATGATCACAGGTGACAATGTTTTCACTGCAAAAGCCATAGCCGCAGAATGTGGGATACTCAAGCCTAATCAGGACATGTTCAGTGGAGCAGTGGTAGAAGGTGTGCAATTTCGCAACTACACGCCGGAAGAGAGAATGTTGAAGGTGGACAAAATCTGTGTAATGGCAAGGTCGTCTCCATTTGACAAGCTTCTAATGGTGAAATGCTTGAAACAGAAAGGCCATGTGGTTGCAGTGACAGGTGACGGCACGAATGATGCACCTGCTTTGAAAGAAGCTGATATAGGACTTTCCATGGGAATTCAAGGCACAGAAGTCGCCAAAGAGAGCTCAGATATTGTGATCATGGATGACAACTTTGCATCAGTGGCCACAGTTTTGAAATGGGGAAGAAGTGTTTACAATAACATCCAGAAGTTCATCCAATTCCAGCTCACTGTCAATGTTGCAGCTCTTGTGATCAACTTTGTAGCAGCAGTTTCTGCAGGTGAAGTCCCATTAACAGCAGTTCAATTGTTGTGGGTGAATTTGATCATGGACACACTAGGTGCTCTTGCTCTTGCCACTGAGAAGCCCACAAAAGAACTCATGGAGAAGAAACCAGTGGGAAGGACTGAGCCTCTCATCACCAACATCATGTGGAGGAACCTCTTGCCTCAAGCACTGTACCAGATTGCAATCCTCCTGACCCTGCAATTCAGAGGCAAATCAATCTTTGGCGTGGATGACAAGGTAAAGGACACCTTGATCTTCAACACGTTTGTGCTGTGCCAGGTGTTCAATGAGTTCAATGCAAGGAAGCTTGAGAAGAAGAATGTGTTCAAGGGAATTCACACCAACAAATTGTTTCTGGGGATCATTGCAGTGACAATTCTGCTTCAGGTGGTGATGGTGGAATTTCTCAAGAAGTTTGCAGATACAGAGAGGTTGAATTGGGGGCAATGGGGTGCATGTATTGGAATTGCAGCTGTTTCTTGGCCAATTGGTTGGGTCGTCAAGTCTATACCTGTACCAGAGAAACCCATTTTCAGCTATCTGAAGATGACAAAACATAAGAAGAACTCCATTTGA

Protein Analysis

1030

Amino Acids

112.94

Weight (kDa)

8.35

Isoelectric Point (pI)

29.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1769
AarI CACCTGC 2 cut(s) 2290, 2495
AasI GACNNNNNNGTC 1 cut(s) 1944
Acc16I TGCGCA 1 cut(s) 1854
Acc36I ACCTGC 2 cut(s) 2290, 2495
AccB1I GGYRCC 2 cut(s) 690, 875
AccI GTMKAC 2 cut(s) 5, 1491
AccII CGCG 1 cut(s) 1160
AciI CCGC 3 cut(s) 1160, 1562, 2061
AclWI GGATC 6 cut(s) 527, 557, 1447, 1579, 1949, 2882
AcoI YGGCCR 3 cut(s) 784, 2388, 2996
AcsI RAATTY 6 cut(s) 161, 1863, 2319, 2545, 2847, 2915
AcuI CTGAAG 3 cut(s) 327, 2882, 3077
AcyI GRCGYC 2 cut(s) 691, 983
AdeI CACNNNGTG 1 cut(s) 2567
AfaI GTAC 5 cut(s) 1336, 1566, 1619, 2687, 3030
AfiI CCNNNNNNNGG 7 cut(s) 265, 289, 295, 431, 767, 1462, 1969
AflIII ACRYGT 2 cut(s) 2094, 2775
AjnI CCWGG 1 cut(s) 2790
AjuI GAANNNNNNNTTGG 2 cut(s) 146, 178
AleI CACNNNNGTG 2 cut(s) 881, 2780
AloI GAACNNNNNNTCC 2 cut(s) 741, 773
Alw21I GWGCWC 4 cut(s) 1059, 1739, 2351, 2572
Alw26I GTCTC 5 cut(s) 518, 1301, 1887, 1983, 2199
Alw44I GTGCAC 1 cut(s) 1735
AlwI GGATC 6 cut(s) 527, 557, 1447, 1579, 1949, 2882
AlwNI CAGNNNCTG 1 cut(s) 2501
Ama87I CYCGRG 2 cut(s) 515, 1967
AoxI GGCC 7 cut(s) 532, 784, 1496, 1626, 2239, 2388, 2996
ApaLI GTGCAC 1 cut(s) 1735
ApoI RAATTY 6 cut(s) 161, 1863, 2319, 2545, 2847, 2915
Asp700I GAANNNNTTC 1 cut(s) 2837
AspLEI GCGC 2 cut(s) 693, 1855
AsuC2I CCSGG 3 cut(s) 290, 1968, 1969
AsuNHI GCTAGC 1 cut(s) 1826
AvaI CYCGRG 2 cut(s) 515, 1967
BaeGI GKGCMC 1 cut(s) 1739
BalI TGGCCA 3 cut(s) 786, 2390, 2998
BanI GGYRCC 2 cut(s) 690, 875
BanII GRGCYC 2 cut(s) 1319, 2351
Bbv12I GWGCWC 4 cut(s) 1059, 1739, 2351, 2572
BccI CCATC 8 cut(s) 157, 548, 776, 884, 1261, 1573, 1913, 2902
BceAI ACGGC 3 cut(s) 948, 1947, 2281
BcgI CGANNNNNNTGC 5 cut(s) 29, 553, 587, 2317, 2351
BciT130I CCWGG 1 cut(s) 2792
BciVI GTATCC 1 cut(s) 2067
BclI TGATCA 5 cut(s) 238, 2022, 2361, 2478, 2550
BcnI CCSGG 3 cut(s) 290, 1968, 1969
BcoDI GTCTC 5 cut(s) 518, 1301, 1887, 1983, 2199
BfaI CTAG 6 cut(s) 1052, 1226, 1500, 1727, 1827, 2564
BfmI CTRYAG 2 cut(s) 1182, 2502
BfoI RGCGCY 1 cut(s) 694
BfuAI ACCTGC 2 cut(s) 2290, 2495
BfuI GTATCC 1 cut(s) 2067
Bme1390I CCNGG 4 cut(s) 290, 1968, 1969, 2792
BmeT110I CYCGRG 2 cut(s) 515, 1967
BmiI GGNNCC 3 cut(s) 692, 877, 2666
BmrFI CCNGG 4 cut(s) 290, 1968, 1969, 2792
BmsI GCATC 6 cut(s) 325, 326, 894, 1829, 2266, 2390
BmtI GCTAGC 1 cut(s) 1830
BpmI CTGGAG 1 cut(s) 109
BpuEI CTTGAG 5 cut(s) 354, 2063, 2661, 2843, 2906
BpuMI CCSGG 3 cut(s) 290, 1968, 1969
Bsa29I ATCGAT 1 cut(s) 552
BsaBI GATNNNNATC 1 cut(s) 2696
BsaHI GRCGYC 2 cut(s) 691, 983
BsaI GGTCTC 3 cut(s) 518, 1301, 1887
BsaJI CCNNGG 7 cut(s) 352, 879, 1311, 1404, 1967, 1968, 2313
BsaXI ACNNNNNCTCC 4 cut(s) 741, 771, 2097, 2127
Bsc4I CCNNNNNNNGG 7 cut(s) 265, 289, 295, 431, 767, 1462, 1969
Bse1I ACTGG 2 cut(s) 1486, 2621
Bse3DI GCAATG 6 cut(s) 375, 1287, 1737, 1842, 2877, 2966
Bse8I GATNNNNATC 1 cut(s) 2696
BseBI CCWGG 1 cut(s) 2792
BseCI ATCGAT 1 cut(s) 552
BseDI CCNNGG 7 cut(s) 352, 879, 1311, 1404, 1967, 1968, 2313
BseJI GATNNNNATC 1 cut(s) 2696
BseLI CCNNNNNNNGG 7 cut(s) 265, 289, 295, 431, 767, 1462, 1969
BseMI GCAATG 6 cut(s) 375, 1287, 1737, 1842, 2877, 2966
BseMII CTCAG 7 cut(s) 1530, 1539, 1707, 1849, 2364, 2577, 2625
BseNI ACTGG 2 cut(s) 1486, 2621
BseRI GAGGAG 1 cut(s) 1889
BseSI GKGCMC 1 cut(s) 1739
BseYI CCCAGC 1 cut(s) 295
BsgI GTGCAG 1 cut(s) 483
Bsh1236I CGCG 1 cut(s) 1160
Bsh1285I CGRYCG 1 cut(s) 1164
BshFI GGCC 7 cut(s) 534, 786, 1498, 1628, 2241, 2390, 2998
BshNI GGYRCC 2 cut(s) 690, 875
BshVI ATCGAT 1 cut(s) 552
BsiEI CGRYCG 1 cut(s) 1164
BsiHKAI GWGCWC 4 cut(s) 1059, 1739, 2351, 2572
BsiHKCI CYCGRG 2 cut(s) 515, 1967
BsiSI CCGG 3 cut(s) 289, 1968, 2144
BslFI GGGAC 2 cut(s) 1950, 2498
BslI CCNNNNNNNGG 7 cut(s) 265, 289, 295, 431, 767, 1462, 1969
BsmAI GTCTC 5 cut(s) 518, 1301, 1887, 1983, 2199
BsmBI CGTCTC 1 cut(s) 2199
BsmFI GGGAC 2 cut(s) 1950, 2498
BsmI GAATGC 2 cut(s) 97, 1611
BsnI GGCC 7 cut(s) 534, 786, 1498, 1628, 2241, 2390, 2998
Bso31I GGTCTC 3 cut(s) 518, 1301, 1887
BsoBI CYCGRG 2 cut(s) 515, 1967
Bsp1286I GDGCHC 5 cut(s) 1059, 1319, 1739, 2351, 2572
Bsp19I CCATGG 3 cut(s) 352, 1311, 2313
BspACI CCGC 3 cut(s) 1160, 1562, 2061
BspANI GGCC 7 cut(s) 534, 786, 1498, 1628, 2241, 2390, 2998
BspCNI CTCAG 7 cut(s) 1531, 1538, 1708, 1848, 2363, 2578, 2626
BspDI ATCGAT 1 cut(s) 552
BspFNI CGCG 1 cut(s) 1160
BspLI GGNNCC 3 cut(s) 692, 877, 2666
BspMAI CTGCAG 2 cut(s) 1186, 2506
BspMI ACCTGC 2 cut(s) 2290, 2495
BspOI GCTAGC 1 cut(s) 1830
BspPI GGATC 6 cut(s) 527, 557, 1447, 1579, 1949, 2882
BspT107I GGYRCC 2 cut(s) 690, 875
BspTNI GGTCTC 3 cut(s) 518, 1301, 1887
BsrDI GCAATG 6 cut(s) 375, 1287, 1737, 1842, 2877, 2966
BsrI ACTGG 2 cut(s) 1486, 2621
BssECI CCNNGG 7 cut(s) 352, 879, 1311, 1404, 1967, 1968, 2313
BssNAI GTATAC 1 cut(s) 1492
BssNI GRCGYC 2 cut(s) 691, 983
BssT1I CCWWGG 4 cut(s) 352, 879, 1311, 2313
Bst1107I GTATAC 1 cut(s) 1492
Bst2UI CCWGG 1 cut(s) 2792
Bst4CI ACNGT 6 cut(s) 211, 1327, 1994, 2395, 2458, 2685
Bst6I CTCTTC 4 cut(s) 1253, 1595, 1661, 2142
BstACI GRCGYC 2 cut(s) 691, 983
BstAPI GCANNNNNTGC 1 cut(s) 2501
BstC8I GCNNGC 5 cut(s) 18, 689, 997, 1220, 1828
BstDEI CTNAG 9 cut(s) 487, 1380, 1525, 1539, 1716, 1835, 2350, 2586, 2634
BstDSI CCRYGG 4 cut(s) 352, 1311, 1404, 2313
BstENI CCTNNNNNAGG 1 cut(s) 263
BstFNI CGCG 1 cut(s) 1160
BstH2I RGCGCY 1 cut(s) 694
BstHHI GCGC 2 cut(s) 693, 1855
BstMAI GTCTC 5 cut(s) 518, 1301, 1887, 1983, 2199
BstMCI CGRYCG 1 cut(s) 1164
BstMWI GCNNNNNNNGC 8 cut(s) 292, 625, 960, 1415, 1839, 2060, 2387, 2501
BstNI CCWGG 1 cut(s) 2792
BstNSI RCATGY 3 cut(s) 20, 2098, 2973
BstSCI CCNGG 4 cut(s) 288, 1966, 1967, 2790
BstSFI CTRYAG 2 cut(s) 1182, 2502
BstSLI GKGCMC 1 cut(s) 1739
BstUI CGCG 1 cut(s) 1160
BstX2I RGATCY 1 cut(s) 1954
BstXI CCANNNNNNTGG 2 cut(s) 359, 3006
BstYI RGATCY 1 cut(s) 1954
BstZ17I GTATAC 1 cut(s) 1492
Bsu15I ATCGAT 1 cut(s) 552
BsuI GTATCC 1 cut(s) 2067
BsuRI GGCC 7 cut(s) 534, 786, 1498, 1628, 2241, 2390, 2998
BsuTUI ATCGAT 1 cut(s) 552
BtgI CCRYGG 4 cut(s) 352, 1311, 1404, 2313
BtgZI GCGATG 1 cut(s) 741
BtsI GCAGTG 4 cut(s) 2043, 2115, 2259, 2889
BveI ACCTGC 2 cut(s) 2290, 2495
Cac8I GCNNGC 5 cut(s) 18, 689, 997, 1220, 1828
CaiI CAGNNNCTG 1 cut(s) 2501
CfoI GCGC 2 cut(s) 693, 1855
Cfr9I CCCGGG 1 cut(s) 1967
ClaI ATCGAT 1 cut(s) 552
CseI GACGC 1 cut(s) 991
Csp6I GTAC 5 cut(s) 1335, 1565, 1618, 2686, 3029
CspCI CAANNNNNGTGG 4 cut(s) 1179, 1214, 2519, 2554
CviQI GTAC 5 cut(s) 1335, 1565, 1618, 2686, 3029
DdeI CTNAG 9 cut(s) 487, 1380, 1525, 1539, 1716, 1835, 2350, 2586, 2634
DinI GGCGCC 1 cut(s) 692
DraI TTTAAA 1 cut(s) 463
DraIII CACNNNGTG 1 cut(s) 2567
DrdI GACNNNNNNGTC 1 cut(s) 1944
DseDI GACNNNNNNGTC 1 cut(s) 1944
EaeI YGGCCR 3 cut(s) 784, 2388, 2996
Eam1104I CTCTTC 4 cut(s) 1253, 1595, 1661, 2142
EarI CTCTTC 4 cut(s) 1253, 1595, 1661, 2142
Ecl136II GAGCTC 1 cut(s) 2349
Eco130I CCWWGG 4 cut(s) 352, 879, 1311, 2313
Eco147I AGGCCT 2 cut(s) 1498, 1628
Eco24I GRGCYC 2 cut(s) 1319, 2351
Eco31I GGTCTC 3 cut(s) 518, 1301, 1887
Eco53kI GAGCTC 1 cut(s) 2349
Eco57I CTGAAG 3 cut(s) 327, 2882, 3077
Eco88I CYCGRG 2 cut(s) 515, 1967
EcoICRI GAGCTC 1 cut(s) 2349
EcoNI CCTNNNNNAGG 1 cut(s) 263
EcoRI GAATTC 2 cut(s) 2319, 2847
EcoRII CCWGG 1 cut(s) 2790
EcoT14I CCWWGG 4 cut(s) 352, 879, 1311, 2313
EcoT22I ATGCAT 1 cut(s) 1844
EcoT38I GRGCYC 2 cut(s) 1319, 2351
EgeI GGCGCC 1 cut(s) 692
EheI GGCGCC 1 cut(s) 692
ErhI CCWWGG 4 cut(s) 352, 879, 1311, 2313
Esp3I CGTCTC 1 cut(s) 2199
FalI AAGNNNNNCTT 2 cut(s) 2747, 2779
FaqI GGGAC 2 cut(s) 1950, 2498
FauNDI CATATG 1 cut(s) 1438
FbaI TGATCA 5 cut(s) 238, 2022, 2361, 2478, 2550
FblI GTMKAC 2 cut(s) 5, 1491
FriOI GRGCYC 2 cut(s) 1319, 2351
FspBI CTAG 6 cut(s) 1052, 1226, 1500, 1727, 1827, 2564
FspI TGCGCA 1 cut(s) 1854
GlaI GCGC 2 cut(s) 692, 1854
GsaI CCCAGC 1 cut(s) 299
GsuI CTGGAG 1 cut(s) 109
HaeII RGCGCY 1 cut(s) 694
HaeIII GGCC 7 cut(s) 534, 786, 1498, 1628, 2241, 2390, 2998
HapII CCGG 3 cut(s) 289, 1968, 2144
HgaI GACGC 1 cut(s) 991
HhaI GCGC 2 cut(s) 693, 1855
Hin1I GRCGYC 2 cut(s) 691, 983
Hin6I GCGC 2 cut(s) 691, 1853
HinP1I GCGC 2 cut(s) 691, 1853
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 5 cut(s) 456, 1416, 1902, 2207, 2819
HinfI GANTC 6 cut(s) 348, 806, 1234, 1240, 1508, 1927
HpaII CCGG 3 cut(s) 289, 1968, 2144
Hpy166II GTNNAC 5 cut(s) 6, 1492, 1737, 2167, 2419
Hpy188I TCNGA 9 cut(s) 903, 1239, 1473, 1507, 1513, 1838, 2353, 2720, 3057
Hpy8I GTNNAC 5 cut(s) 6, 1492, 1737, 2167, 2419
HpyCH4III ACNGT 6 cut(s) 211, 1327, 1994, 2395, 2458, 2685
HpyCH4IV ACGT 3 cut(s) 660, 1620, 2777
HpyF10VI GCNNNNNNNGC 8 cut(s) 292, 625, 960, 1415, 1839, 2060, 2387, 2501
HpyF3I CTNAG 9 cut(s) 487, 1380, 1525, 1539, 1716, 1835, 2350, 2586, 2634
HpySE526I ACGT 3 cut(s) 660, 1620, 2777
Hsp92I GRCGYC 2 cut(s) 691, 983
HspAI GCGC 2 cut(s) 691, 1853
KasI GGCGCC 1 cut(s) 690
Ksp22I TGATCA 5 cut(s) 238, 2022, 2361, 2478, 2550
LmnI GCTCC 6 cut(s) 128, 291, 292, 1709, 1876, 2105
LweI GCATC 6 cut(s) 325, 326, 894, 1829, 2266, 2390
MaeI CTAG 6 cut(s) 1052, 1226, 1500, 1727, 1827, 2564
MaeII ACGT 3 cut(s) 660, 1620, 2777
MfeI CAATTG 4 cut(s) 1020, 1191, 2531, 3000
MflI RGATCY 1 cut(s) 1954
MhlI GDGCHC 5 cut(s) 1059, 1319, 1739, 2351, 2572
MlsI TGGCCA 3 cut(s) 786, 2390, 2998
MluNI TGGCCA 3 cut(s) 786, 2390, 2998
Mly113I GGCGCC 1 cut(s) 691
MlyI GAGTC 3 cut(s) 1228, 1234, 1921
MmeI TCCRAC 1 cut(s) 1966
Mox20I TGGCCA 3 cut(s) 786, 2390, 2998
Mph1103I ATGCAT 1 cut(s) 1844
MroXI GAANNNNTTC 1 cut(s) 2837
MscI TGGCCA 3 cut(s) 786, 2390, 2998
MseI TTAA 6 cut(s) 462, 537, 1154, 1446, 1950, 2519
MslI CAYNNNNRTG 6 cut(s) 357, 413, 584, 881, 2780, 2882
Msp20I TGGCCA 3 cut(s) 786, 2390, 2998
MspA1I CMGCKG 3 cut(s) 764, 1181, 2987
MspI CCGG 3 cut(s) 289, 1968, 2144
MspR9I CCNGG 4 cut(s) 290, 1968, 1969, 2792
MunI CAATTG 4 cut(s) 1020, 1191, 2531, 3000
Mva1269I GAATGC 2 cut(s) 97, 1611
MvaI CCWGG 1 cut(s) 2792
MvnI CGCG 1 cut(s) 1160
MwoI GCNNNNNNNGC 8 cut(s) 292, 625, 960, 1415, 1839, 2060, 2387, 2501
NarI GGCGCC 1 cut(s) 691
NciI CCSGG 3 cut(s) 290, 1968, 1969
NcoI CCATGG 3 cut(s) 352, 1311, 2313
NdeI CATATG 1 cut(s) 1438
NheI GCTAGC 1 cut(s) 1826
NlaIV GGNNCC 3 cut(s) 692, 877, 2666
NmuCI GTSAC 8 cut(s) 827, 965, 1231, 1375, 2030, 2254, 2261, 2884
NsbI TGCGCA 1 cut(s) 1854
NsiI ATGCAT 1 cut(s) 1844
NspI RCATGY 3 cut(s) 20, 2098, 2973
OliI CACNNNNGTG 2 cut(s) 881, 2780
PaeI GCATGC 1 cut(s) 20
PaqCI CACCTGC 2 cut(s) 2290, 2495
PceI AGGCCT 2 cut(s) 1498, 1628
PciI ACATGT 1 cut(s) 2094
PctI GAATGC 2 cut(s) 97, 1611
PdmI GAANNNNTTC 1 cut(s) 2837
PfeI GAWTC 3 cut(s) 348, 806, 1508
PflFI GACNNNGTC 1 cut(s) 659
PfoI TCCNGGA 1 cut(s) 288
PleI GAGTC 3 cut(s) 1228, 1234, 1921
PluTI GGCGCC 1 cut(s) 694
PpsI GAGTC 3 cut(s) 1228, 1234, 1921
PscI ACATGT 1 cut(s) 2094
PsiI TTATAA 1 cut(s) 1769
Psp124BI GAGCTC 1 cut(s) 2351
Psp6I CCWGG 1 cut(s) 2790
PspFI CCCAGC 1 cut(s) 295
PspGI CCWGG 1 cut(s) 2790
PspN4I GGNNCC 3 cut(s) 692, 877, 2666
PstI CTGCAG 2 cut(s) 1186, 2506
PstNI CAGNNNCTG 1 cut(s) 2501
PsuI RGATCY 1 cut(s) 1954
PsyI GACNNNGTC 1 cut(s) 659
PvuII CAGCTG 3 cut(s) 764, 1181, 2987
RsaI GTAC 5 cut(s) 1336, 1566, 1619, 2687, 3030
RsaNI GTAC 5 cut(s) 1335, 1565, 1618, 2686, 3029
RseI CAYNNNNRTG 6 cut(s) 357, 413, 584, 881, 2780, 2882
SacI GAGCTC 1 cut(s) 2351
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 6 cut(s) 462, 537, 1154, 1446, 1950, 2519
SchI GAGTC 3 cut(s) 1228, 1234, 1921
ScrFI CCNGG 4 cut(s) 290, 1968, 1969, 2792
SduI GDGCHC 5 cut(s) 1059, 1319, 1739, 2351, 2572
SfaNI GCATC 6 cut(s) 325, 326, 894, 1829, 2266, 2390
SfcI CTRYAG 2 cut(s) 1182, 2502
SfoI GGCGCC 1 cut(s) 692
SmaI CCCGGG 1 cut(s) 1969
SmiMI CAYNNNNRTG 6 cut(s) 357, 413, 584, 881, 2780, 2882
SmlI CTYRAG 5 cut(s) 369, 2078, 2676, 2822, 2921
SmoI CTYRAG 5 cut(s) 369, 2078, 2676, 2822, 2921
SphI GCATGC 1 cut(s) 20
SseBI AGGCCT 2 cut(s) 1498, 1628
SsiI CCGC 3 cut(s) 1160, 1562, 2061
SspDI GGCGCC 1 cut(s) 690
SspI AATATT 1 cut(s) 708
SspMI CTAG 6 cut(s) 1052, 1226, 1500, 1727, 1827, 2564
SstI GAGCTC 1 cut(s) 2351
StuI AGGCCT 2 cut(s) 1498, 1628
StyD4I CCNGG 4 cut(s) 288, 1966, 1967, 2790
StyI CCWWGG 4 cut(s) 352, 879, 1311, 2313
TaaI ACNGT 6 cut(s) 211, 1327, 1994, 2395, 2458, 2685
TaiI ACGT 3 cut(s) 663, 1623, 2780
TaqI TCGA 5 cut(s) 5, 213, 552, 711, 1574
TatI WGTACW 1 cut(s) 1334
TauI GCSGC 1 cut(s) 2063
TfiI GAWTC 3 cut(s) 348, 806, 1508
Tru1I TTAA 6 cut(s) 462, 537, 1154, 1446, 1950, 2519
Tru9I TTAA 6 cut(s) 462, 537, 1154, 1446, 1950, 2519
TseFI GTSAC 8 cut(s) 827, 965, 1231, 1375, 2030, 2254, 2261, 2884
Tsp45I GTSAC 8 cut(s) 827, 965, 1231, 1375, 2030, 2254, 2261, 2884
TspGWI ACGGA 1 cut(s) 849
TspMI CCCGGG 1 cut(s) 1967
Tth111I GACNNNGTC 1 cut(s) 659
VneI GTGCAC 1 cut(s) 1735
XagI CCTNNNNNAGG 1 cut(s) 263
XapI RAATTY 6 cut(s) 161, 1863, 2319, 2545, 2847, 2915
XceI RCATGY 3 cut(s) 20, 2098, 2973
XmaI CCCGGG 1 cut(s) 1967
XmiI GTMKAC 2 cut(s) 5, 1491
XmnI GAANNNNTTC 1 cut(s) 2837
XspI CTAG 6 cut(s) 1052, 1226, 1500, 1727, 1827, 2564
Zsp2I ATGCAT 1 cut(s) 1844
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.