RchiOBHm_Chr4g0388291

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
3451706 .. 3453827
2122 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36152

Sequence Viewer

Length: 1665 bp
ATGAGTAGCAGCACTGTAAGTGCAAATTTGAATCTCGTTGAGCTCAACAAGGGGTTCAAAATCGATAACAAATGCCTCACTCAACTCATGAAGGAGAAGAATCTAAACCTGCTTCAAGAGCTCGGAGGCACTAATGGTATTGCGTCAGCTCTTGAAGCCGACAGTGAGCGTGGAGTCCATGATGAAAAGGACAACATTGCTCTCCACCGTGAAGCATTTGGCTCAAACACGTATAGCAAACCACCTTCGAAAAGCCTTTTCCATTTTATGTGGCAAGCCTCTAAGGACCTCACCATTGTCATTCTCCTAGGCTGCGCTGCGCTTTCGCTTGGCTTTGGCATCAAGCAAGATGGACTCAAAGAAGGTTGGTATGATGGTGGAAGCATCTTCATTGCTGTTGTTCTCATCGTTGCTATATCTGCCATTAGTGACTACAGACAGAACAAGCAGTTCGAAAAGCTGTCCAAAGCGAGTGATGATATCCCAATAGATGTTGTAAGAGGTGGAAGAAGACAGAAGGTTTCCATCTTTGAAATTGTAGTTGGAGATGTTGTGTTTCTGAAGATTGGAGACCAAGTTCCTGCTGATGGATTGTTCTTATATGGACATTCGTTGCGAGTAGACGAATCAAGCATGACAGGGGAAAGTGACCATGTGGAGGTTGATTGCAGCAACAATCCATTCTTGTATTCTGGAACCAAAGTGGTTGATGGATACGGCCGAATGCTTGTGACTTCAGTAGGGATGAACTCAAGTTGGGGCCAAATGATGAGCTTGATCAGCCACGAAAACAATGAGCAGACACCTTTACAAGAAAAGCTTAGTAAGTTCACTCCATTACTTGCTAAGATTGGCTTGGCAGTTGCATTCATGGTCTTTGTGGTGCTGTTAGTTCGTTACTTCACAGGAAACACAAAGAGTGAGAATGGAAGTTTTGGTAAGTTCAAGGGAGGCAAGACGAGGATTGATGATGTGGCCAATGCCTTGTTGGATATGGTAGCAGTTGCTGTCATTATTGTTGTGATTGCAATTCCAGAAGGGTTTCCACTGGCTGTGACTCTAACTCTTGCTTACTCGATGAAGAAAATGATGGCGGATCATGCATTGGTTCGGAGGCTCTCAGCTTGCGAGACTATGGGATGTGCCACCATAATCTGTACAGACAAAACAGGTACTCTCACACTCAACGAGATGAAGGTTGTGAAGTTTTGGATTGGAAAGGAAAGTGTGGAAGATGATGCTGCCCATTCATCAATTCCTGTTAGAGTTCTTGATTTGATCCGAGAAGGGGTAGCGTTCAATACAACAGGAAGTGTTTACAGGCCTAACTCAGGATCAGGGTTTGAGTTTTCCGGCAGTCCTACTGAAAAGGCTATTCTTTCATGGGCTGCACTTGAGCTGAACATGGACATCGATGAGTTGAAACAGAACTGTACCATTCAACATGTAGAGGCCTTCAATTCACAGAAGAAGCGAAGCGGGGTTTTGGTGAGAAGGAAGAAAGACAATACAATCCATGTGCATTGGAAAGGAGCTGCAGAGATGATAGTAGACATGTGCTCAAGTTCCTACGATGCCTCTGGTGTTACCAATGATCTTGGTGAAGATGAAAGGAAGCAGTTCAAGAAAATTGTTCAAGCAAGATGCTGGAAGAGCACAACTTGA

Protein Analysis

554

Amino Acids

60.69

Weight (kDa)

6.44

Isoelectric Point (pI)

25.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 41 - 109 6.4e-11 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 164 - 260 6.1e-22 P-type ATPase actuator domain
Cation_ATPase PF13246 425 - 545 1.6e-15 P-type ATPase, cytoplasmic domain N
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 117
AccI GTMKAC 2 cut(s) 621, 1551
AciI CCGC 2 cut(s) 1094, 1479
AclWI GGATC 3 cut(s) 1104, 1273, 1342
AcoI YGGCCR 2 cut(s) 718, 975
AcsI RAATTY 1 cut(s) 25
AcuI CTGAAG 2 cut(s) 581, 720
AfaI GTAC 3 cut(s) 1159, 1174, 1435
AfiI CCNNNNNNNGG 4 cut(s) 587, 658, 1288, 1331
AflIII ACRYGT 3 cut(s) 228, 1444, 1554
AjuI GAANNNNNNNTTGG 2 cut(s) 525, 557
AloI GAACNNNNNNTCC 2 cut(s) 561, 593
AluBI AGCT 9 cut(s) 43, 121, 149, 460, 774, 820, 1124, 1399, 1535
AluI AGCT 9 cut(s) 43, 121, 149, 460, 774, 820, 1124, 1399, 1535
Alw21I GWGCWC 4 cut(s) 45, 123, 1562, 1658
Alw26I GTCTC 2 cut(s) 564, 1124
AlwI GGATC 3 cut(s) 1104, 1273, 1342
AlwNI CAGNNNCTG 1 cut(s) 1007
AoxI GGCC 5 cut(s) 718, 760, 975, 1322, 1452
ApeKI GCWGC 7 cut(s) 9, 312, 317, 669, 1241, 1388, 1535
ApoI RAATTY 1 cut(s) 25
Asp700I GAANNNNTTC 2 cut(s) 1041, 1619
AspA2I CCTAGG 1 cut(s) 307
AspLEI GCGC 2 cut(s) 317, 322
AspS9I GGNCC 2 cut(s) 286, 760
AsuHPI GGTGA 3 cut(s) 283, 1501, 1613
AsuII TTCGAA 2 cut(s) 248, 453
AvaII GGWCC 1 cut(s) 286
AvrII CCTAGG 1 cut(s) 307
BalI TGGCCA 1 cut(s) 977
BanII GRGCYC 2 cut(s) 45, 123
BbsI GAAGAC 1 cut(s) 517
Bbv12I GWGCWC 4 cut(s) 45, 123, 1562, 1658
BbvI GCAGC 7 cut(s) 21, 299, 304, 681, 1228, 1375, 1522
BccI CCATC 6 cut(s) 344, 368, 533, 581, 704, 1084
BceAI ACGGC 1 cut(s) 733
BciVI GTATCC 1 cut(s) 707
BclI TGATCA 1 cut(s) 777
BcoDI GTCTC 2 cut(s) 564, 1124
BfaI CTAG 1 cut(s) 308
BfmI CTRYAG 2 cut(s) 433, 1536
BfuAI ACCTGC 1 cut(s) 117
BfuI GTATCC 1 cut(s) 707
BisI GCNGC 7 cut(s) 10, 313, 318, 670, 1242, 1389, 1536
BlnI CCTAGG 1 cut(s) 307
BlsI GCNGC 7 cut(s) 11, 314, 319, 671, 1243, 1390, 1537
Bme18I GGWCC 1 cut(s) 286
BmgT120I GGNCC 2 cut(s) 286, 760
BmiI GGNNCC 2 cut(s) 697, 761
BmsI GCATC 5 cut(s) 348, 393, 1228, 1564, 1634
BpiI GAAGAC 1 cut(s) 517
Bpu14I TTCGAA 2 cut(s) 248, 453
BpuEI CTTGAG 3 cut(s) 736, 1415, 1546
Bsa29I ATCGAT 2 cut(s) 63, 1413
BsaAI YACGTR 1 cut(s) 231
BsaI GGTCTC 1 cut(s) 564
BsaJI CCNNGG 1 cut(s) 307
BsaXI ACNNNNNCTCC 4 cut(s) 537, 561, 567, 591
Bsc4I CCNNNNNNNGG 4 cut(s) 587, 658, 1288, 1331
Bse1I ACTGG 1 cut(s) 1053
Bse3DI GCAATG 2 cut(s) 195, 390
BseCI ATCGAT 2 cut(s) 63, 1413
BseDI CCNNGG 1 cut(s) 307
BseGI GGATG 2 cut(s) 750, 1145
BseLI CCNNNNNNNGG 4 cut(s) 587, 658, 1288, 1331
BseMI GCAATG 2 cut(s) 195, 390
BseMII CTCAG 2 cut(s) 1134, 1344
BseNI ACTGG 1 cut(s) 1053
BseX3I CGGCCG 1 cut(s) 718
BseXI GCAGC 7 cut(s) 21, 299, 304, 681, 1228, 1375, 1522
BsgI GTGCAG 1 cut(s) 1374
Bsh1285I CGRYCG 1 cut(s) 721
BshFI GGCC 5 cut(s) 720, 762, 977, 1324, 1454
BshVI ATCGAT 2 cut(s) 63, 1413
BsiEI CGRYCG 1 cut(s) 721
BsiHKAI GWGCWC 4 cut(s) 45, 123, 1562, 1658
BsiSI CCGG 1 cut(s) 1353
BslI CCNNNNNNNGG 4 cut(s) 587, 658, 1288, 1331
BsmAI GTCTC 2 cut(s) 564, 1124
BsmI GAATGC 2 cut(s) 729, 866
BsnI GGCC 5 cut(s) 720, 762, 977, 1324, 1454
Bso31I GGTCTC 1 cut(s) 564
Bsp119I TTCGAA 2 cut(s) 248, 453
Bsp1286I GDGCHC 4 cut(s) 45, 123, 1562, 1658
Bsp1407I TGTACA 1 cut(s) 1157
Bsp143I GATC 5 cut(s) 777, 1096, 1278, 1334, 1594
BspACI CCGC 2 cut(s) 1094, 1479
BspANI GGCC 5 cut(s) 720, 762, 977, 1324, 1454
BspCNI CTCAG 2 cut(s) 1133, 1343
BspDI ATCGAT 2 cut(s) 63, 1413
BspHI TCATGA 1 cut(s) 87
BspLI GGNNCC 2 cut(s) 697, 761
BspMAI CTGCAG 1 cut(s) 1540
BspMI ACCTGC 1 cut(s) 117
BspPI GGATC 3 cut(s) 1104, 1273, 1342
BspQI GCTCTTC 1 cut(s) 1646
BspT104I TTCGAA 2 cut(s) 248, 453
BspTNI GGTCTC 1 cut(s) 564
BsrDI GCAATG 2 cut(s) 195, 390
BsrGI TGTACA 1 cut(s) 1157
BsrI ACTGG 1 cut(s) 1053
BssECI CCNNGG 1 cut(s) 307
BssMI GATC 5 cut(s) 777, 1096, 1278, 1334, 1594
BssT1I CCWWGG 1 cut(s) 307
Bst4CI ACNGT 4 cut(s) 16, 164, 209, 1433
Bst6I CTCTTC 1 cut(s) 1646
BstAUI TGTACA 1 cut(s) 1157
BstBAI YACGTR 1 cut(s) 231
BstBI TTCGAA 2 cut(s) 248, 453
BstC8I GCNNGC 2 cut(s) 276, 1126
BstDEI CTNAG 5 cut(s) 282, 821, 846, 1120, 1330
BstENI CCTNNNNNAGG 1 cut(s) 1329
BstF5I GGATG 2 cut(s) 750, 1145
BstHHI GCGC 2 cut(s) 317, 322
BstKTI GATC 5 cut(s) 780, 1099, 1281, 1337, 1597
BstMAI GTCTC 2 cut(s) 564, 1124
BstMBI GATC 5 cut(s) 777, 1096, 1278, 1334, 1594
BstMCI CGRYCG 1 cut(s) 721
BstMWI GCNNNNNNNGC 6 cut(s) 118, 155, 419, 780, 1100, 1653
BstNSI RCATGY 2 cut(s) 1448, 1558
BstSFI CTRYAG 2 cut(s) 433, 1536
BstV1I GCAGC 7 cut(s) 21, 299, 304, 681, 1228, 1375, 1522
BstV2I GAAGAC 1 cut(s) 517
BstZI CGGCCG 1 cut(s) 718
Bsu15I ATCGAT 2 cut(s) 63, 1413
BsuI GTATCC 1 cut(s) 707
BsuRI GGCC 5 cut(s) 720, 762, 977, 1324, 1454
BsuTUI ATCGAT 2 cut(s) 63, 1413
BtsCI GGATG 2 cut(s) 750, 1145
BtsIMutI CAGTG 3 cut(s) 12, 169, 1046
BveI ACCTGC 1 cut(s) 117
Cac8I GCNNGC 2 cut(s) 276, 1126
CaiI CAGNNNCTG 1 cut(s) 1007
CciI TCATGA 1 cut(s) 87
CfoI GCGC 2 cut(s) 317, 322
Cfr13I GGNCC 2 cut(s) 286, 760
ClaI ATCGAT 2 cut(s) 63, 1413
CseI GACGC 1 cut(s) 132
Csp6I GTAC 3 cut(s) 1158, 1173, 1434
CviQI GTAC 3 cut(s) 1158, 1173, 1434
DdeI CTNAG 5 cut(s) 282, 821, 846, 1120, 1330
DpnI GATC 5 cut(s) 779, 1098, 1280, 1336, 1596
DpnII GATC 5 cut(s) 777, 1096, 1278, 1334, 1594
EaeI YGGCCR 2 cut(s) 718, 975
EagI CGGCCG 1 cut(s) 718
Eam1104I CTCTTC 1 cut(s) 1646
EarI CTCTTC 1 cut(s) 1646
EciI GGCGGA 1 cut(s) 1109
Ecl136II GAGCTC 2 cut(s) 43, 121
EclXI CGGCCG 1 cut(s) 718
Eco130I CCWWGG 1 cut(s) 307
Eco147I AGGCCT 2 cut(s) 1324, 1454
Eco24I GRGCYC 2 cut(s) 45, 123
Eco31I GGTCTC 1 cut(s) 564
Eco32I GATATC 1 cut(s) 481
Eco47I GGWCC 1 cut(s) 286
Eco52I CGGCCG 1 cut(s) 718
Eco53kI GAGCTC 2 cut(s) 43, 121
Eco57I CTGAAG 2 cut(s) 581, 720
EcoICRI GAGCTC 2 cut(s) 43, 121
EcoNI CCTNNNNNAGG 1 cut(s) 1329
EcoO109I RGGNCCY 1 cut(s) 286
EcoRV GATATC 1 cut(s) 481
EcoT14I CCWWGG 1 cut(s) 307
EcoT22I ATGCAT 1 cut(s) 1105
EcoT38I GRGCYC 2 cut(s) 45, 123
ErhI CCWWGG 1 cut(s) 307
FalI AAGNNNNNCTT 4 cut(s) 804, 836, 839, 871
FauI CCCGC 1 cut(s) 1472
FbaI TGATCA 1 cut(s) 777
FblI GTMKAC 2 cut(s) 621, 1551
Fnu4HI GCNGC 7 cut(s) 10, 313, 318, 670, 1242, 1389, 1536
FokI GGATG 2 cut(s) 757, 1152
FriOI GRGCYC 2 cut(s) 45, 123
Fsp4HI GCNGC 7 cut(s) 10, 313, 318, 670, 1242, 1389, 1536
FspBI CTAG 1 cut(s) 308
GlaI GCGC 2 cut(s) 316, 321
GluI GCNGC 7 cut(s) 10, 313, 318, 670, 1242, 1389, 1536
HaeIII GGCC 5 cut(s) 720, 762, 977, 1324, 1454
HapII CCGG 1 cut(s) 1353
HgaI GACGC 1 cut(s) 132
HhaI GCGC 2 cut(s) 317, 322
Hin6I GCGC 2 cut(s) 315, 320
HinP1I GCGC 2 cut(s) 315, 320
HindIII AAGCTT 1 cut(s) 818
HinfI GANTC 6 cut(s) 31, 100, 174, 354, 626, 1057
HpaII CCGG 1 cut(s) 1353
HphI GGTGA 3 cut(s) 283, 1501, 1613
Hpy166II GTNNAC 4 cut(s) 622, 831, 1318, 1552
Hpy188I TCNGA 4 cut(s) 125, 561, 1113, 1283
Hpy188III TCNNGA 8 cut(s) 88, 116, 152, 693, 1034, 1271, 1332, 1624
Hpy8I GTNNAC 4 cut(s) 622, 831, 1318, 1552
HpyAV CCTTC 9 cut(s) 85, 255, 356, 511, 1031, 1189, 1280, 1465, 1488
HpyCH4III ACNGT 4 cut(s) 16, 164, 209, 1433
HpyCH4IV ACGT 1 cut(s) 230
HpyCH4V TGCA 8 cut(s) 23, 669, 866, 1028, 1103, 1391, 1522, 1538
HpyF10VI GCNNNNNNNGC 6 cut(s) 118, 155, 419, 780, 1100, 1653
HpyF3I CTNAG 5 cut(s) 282, 821, 846, 1120, 1330
HpySE526I ACGT 1 cut(s) 230
HspAI GCGC 2 cut(s) 315, 320
Ksp22I TGATCA 1 cut(s) 777
Kzo9I GATC 5 cut(s) 777, 1096, 1278, 1334, 1594
LguI GCTCTTC 1 cut(s) 1646
LmnI GCTCC 1 cut(s) 1532
Lsp1109I GCAGC 7 cut(s) 21, 299, 304, 681, 1228, 1375, 1522
LweI GCATC 5 cut(s) 348, 393, 1228, 1564, 1634
MaeI CTAG 1 cut(s) 308
MaeII ACGT 1 cut(s) 230
MaeIII GTNAC 6 cut(s) 428, 647, 730, 896, 1054, 1585
MalI GATC 5 cut(s) 779, 1098, 1280, 1336, 1596
MboI GATC 5 cut(s) 777, 1096, 1278, 1334, 1594
MhlI GDGCHC 4 cut(s) 45, 123, 1562, 1658
MlsI TGGCCA 1 cut(s) 977
MluCI AATT 6 cut(s) 25, 534, 1029, 1254, 1459, 1629
MluNI TGGCCA 1 cut(s) 977
MlyI GAGTC 3 cut(s) 183, 348, 1051
MmeI TCCRAC 2 cut(s) 523, 969
Mox20I TGGCCA 1 cut(s) 977
Mph1103I ATGCAT 1 cut(s) 1105
MroXI GAANNNNTTC 2 cut(s) 1041, 1619
MscI TGGCCA 1 cut(s) 977
Msp20I TGGCCA 1 cut(s) 977
MspI CCGG 1 cut(s) 1353
MteI GCGCNGCGC 1 cut(s) 318
Mva1269I GAATGC 2 cut(s) 729, 866
MwoI GCNNNNNNNGC 6 cut(s) 118, 155, 419, 780, 1100, 1653
NdeII GATC 5 cut(s) 777, 1096, 1278, 1334, 1594
NlaIV GGNNCC 2 cut(s) 697, 761
NmuCI GTSAC 4 cut(s) 428, 647, 730, 1054
NsiI ATGCAT 1 cut(s) 1105
NspI RCATGY 2 cut(s) 1448, 1558
NspV TTCGAA 2 cut(s) 248, 453
PagI TCATGA 1 cut(s) 87
PceI AGGCCT 2 cut(s) 1324, 1454
PciI ACATGT 2 cut(s) 1444, 1554
PciSI GCTCTTC 1 cut(s) 1646
PctI GAATGC 2 cut(s) 729, 866
PdmI GAANNNNTTC 2 cut(s) 1041, 1619
PfeI GAWTC 3 cut(s) 31, 100, 626
PkrI GCNGC 7 cut(s) 11, 314, 319, 671, 1243, 1390, 1537
PleI GAGTC 3 cut(s) 182, 348, 1051
PpsI GAGTC 3 cut(s) 182, 348, 1051
Ppu21I YACGTR 1 cut(s) 231
PpuMI RGGWCCY 1 cut(s) 286
PscI ACATGT 2 cut(s) 1444, 1554
Psp124BI GAGCTC 2 cut(s) 45, 123
Psp5II RGGWCCY 1 cut(s) 286
PspN4I GGNNCC 2 cut(s) 697, 761
PspPI GGNCC 2 cut(s) 286, 760
PspPPI RGGWCCY 1 cut(s) 286
PstI CTGCAG 1 cut(s) 1540
PstNI CAGNNNCTG 1 cut(s) 1007
RsaI GTAC 3 cut(s) 1159, 1174, 1435
RsaNI GTAC 3 cut(s) 1158, 1173, 1434
SacI GAGCTC 2 cut(s) 45, 123
SapI GCTCTTC 1 cut(s) 1646
SatI GCNGC 7 cut(s) 10, 313, 318, 670, 1242, 1389, 1536
Sau3AI GATC 5 cut(s) 777, 1096, 1278, 1334, 1594
Sau96I GGNCC 2 cut(s) 286, 760
SchI GAGTC 3 cut(s) 183, 348, 1051
SduI GDGCHC 4 cut(s) 45, 123, 1562, 1658
SfaNI GCATC 5 cut(s) 348, 393, 1228, 1564, 1634
SfcI CTRYAG 2 cut(s) 433, 1536
SfuI TTCGAA 2 cut(s) 248, 453
SinI GGWCC 1 cut(s) 286
SmlI CTYRAG 3 cut(s) 751, 1394, 1561
SmoI CTYRAG 3 cut(s) 751, 1394, 1561
Sse9I AATT 6 cut(s) 25, 534, 1029, 1254, 1459, 1629
SseBI AGGCCT 2 cut(s) 1324, 1454
SsiI CCGC 2 cut(s) 1094, 1479
SspMI CTAG 1 cut(s) 308
SstI GAGCTC 2 cut(s) 45, 123
StuI AGGCCT 2 cut(s) 1324, 1454
StyI CCWWGG 1 cut(s) 307
TaaI ACNGT 4 cut(s) 16, 164, 209, 1433
TaiI ACGT 1 cut(s) 233
TaqI TCGA 5 cut(s) 63, 248, 453, 1076, 1413
TasI AATT 6 cut(s) 25, 534, 1029, 1254, 1459, 1629
TatI WGTACW 1 cut(s) 1157
TfiI GAWTC 3 cut(s) 31, 100, 626
TscAI CASTG 3 cut(s) 19, 169, 1053
TseFI GTSAC 4 cut(s) 428, 647, 730, 1054
TseI GCWGC 7 cut(s) 9, 312, 317, 669, 1241, 1388, 1535
Tsp45I GTSAC 4 cut(s) 428, 647, 730, 1054
TspRI CASTG 3 cut(s) 19, 169, 1053
VpaK11BI GGWCC 1 cut(s) 286
XagI CCTNNNNNAGG 1 cut(s) 1329
XapI RAATTY 1 cut(s) 25
XceI RCATGY 2 cut(s) 1448, 1558
XcmI CCANNNNNNNNNTGG 1 cut(s) 985
XmaJI CCTAGG 1 cut(s) 307
XmiI GTMKAC 2 cut(s) 621, 1551
XmnI GAANNNNTTC 2 cut(s) 1041, 1619
XspI CTAG 1 cut(s) 308
Zsp2I ATGCAT 1 cut(s) 1105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.