RLG00000033880

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
33673870 .. 33676887
3018 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033880

Sequence Viewer

Length: 3018 bp
ATGTCTGATTCTCCAACCATGCATATGCATGCAGAGAGCATGCTTGATGATCCCAGCACTAGGCTCCTTAATGATAAACCCAAAAACAAATGGCGTACTGCTGTTTCCACCATCTTCTGCATTCGAGCCCTCCTCTCTCTACTCAACCAAATCACAAAAACCAACTTCATAACATCTAGTTCTCCGGTCTCTTCCAATAGTACTTTCAATGTGGACCAAATAGCTCTCACTCGGCTTGTGAAGAACAAAGATCTTGCTCAACTGCAAGATTTGGGAGGGGTTGAAGGAGTAGCATTACATCTCAAATCTGATAAAGAGCATGGAATTCCTTGCCATGATTCTGAGGACATTCCCGACAGAATCAAAGAATTCGGTTCAAACGTTTACATAAAAGCCCCCAAAGGAGGTTTTTTCCGTTTTGTGTGGAAAGCCTTCAAAGACCCAACTGTACTCATCCTCTTAGGCTGTGCGGCACTTTCTCTTGGTTTTGACATCAATGAACATGGATTCAAAGAAGGTTGTACTAATGCTGGAACCATATTGCTCGCAGTCATTCAAATCATTTCCGTGTCTGCAGTAAGCGATTACAGGCAGAGCAGACCTTTGGTGCGTAACAATATCCAAATTGAGGTGTGGAGAGGTGGCAGGAGGCAAAAGATTTCTGTTTATGAAACTGTGGTTGGGGATGTAATTCTCTTGAATATTGGAGATCGGGTGCCGGCTGATGGATTACTTGTACAAGGCCATTCCTTGCAAGTAGACGAATCAAGCATGACAGGAACCGATAGCCCTGTTGAAATTAGCCACCATCAGAATCCCTTCCTTTTTTCTGGAACAAAAATCACACATGGATTTGGTCGAATGCTTGTCACATCCGTTGGGATGAACACAACGTGGGGTGAGATGATGAGCCAAATGAGGCAAGACTCCAGTGAAAGGACACCCCTGCAAGAACGTCTGGAGAAGCTAAATTCGTTAATAGGTAAAGTAGCTTTGCTAGTTGCTTTCCTTCTTCTTGTAGTCTTGTTAGTTCGATACTTCACGGGGAATACCAAGGATGAGAATGGAAACAAGGAGTTCAATGGCAGCAACACAGAAGTAGATGACATAATAAGCGCTGTCATTGGGATTGTAGCGGCTGCGGTTTCCATTGTTGTGGTGGCAATTCCAGAAGGTCTCTCATTAGCACTAATTCTTGCTGTTGCCTATTCCAAGAAGATAATGATGGCTGACAAAGCAATGGATCTGAAGCTCTCTGCTTGTGAGACAATGGGATCTGTTACCACAATTTGCACTGACAAAACAGGTACTCTTACTATGAACCAGATGGAGGTGACCCAGTTTTGGTTAGGTAAATATTCTTTGGAAGAAGAAGCTTATTCATCAGAGATTTCTCCTTCTGTTCTTTATTTGATCCAAGAAGGAGTTGCTCTGAATACAACTGGTAGTGTGCACAAGCAAAGTTTGGATTCAAAAGTAGAAATCTCAGGCAGTCCAACTGAAAAGGCTATTATTTCATGGGGGGTATTTAAGTTGCAGATGGATATGGAGAAAGTAATGAAGAGTTGTAGCATTCTCCATGTTGAGGCCTTTGATTCGCAGAATATGCGAAGTGGGGTTTCAATGAAGAGGAACGCAGACAACACAGTTCATGTACATTGGAAAGGAGCTGCAGAGATCATACTGGAAATGTGTTCAAGTTACTACAATCCCTCTGGACTCGTTATAAATATGGGTGACAGTGAAAAAATGAGTTTTGAGGAGATTATTCAAGGTATGGCAGCTAGCGGACTCCGGTGTATTGCGTTTGCACATAAAGAAGTTCCAGCAGATCAAAACCATAGAACTATGCTACAAGAAGATGGATTGACCTTGGTGGGACTTGTAGGTCTTAAAGATCCATGCCGTCCAGAAGCAAAGAAAGCAGTTGAAGATTGTCAATATGCAGGGGTGATGGTCAAAATGATTACAGGCGACAATATTTTCACTGCTAAAGCGATAGCCACAGAATGTGGGATACTCAAGTCCAGTCATGACATCTTCAGTGGAGCAGTGATAAACGGTGTGGAATTTCGAAGCTACACCGACTTGGAGAGAATGTTGAAGCTGGACAATATCTGTGTAATGGCGAGGTCTTCTGCTGCTGATAAGCTTCTAATGGTGCGATGCTTGAAGCAGAAAGGTCATGTAGTTGCAGTGACTGGTCATGGCGCTACTGATGCCCCAGCATTGGAAGAAGCTGACATAGGACTATCTATGGGAATTCAAGGAACAGAAGTTGCCAAAGAAAGCTCAGATATTATAATCACGGATGATAACTTTGCTTCAGTGGTCAGTGTTTTGGCATGCGGAAGATGTGTTTATCACAATACGCAGAAGCTCGTCCAATTCCAGCTCACATCAAATGTTGCTGGTCTTTTGATCAACTTTGCAGTAGCGGCTTCATCAAGGCAAGTGCCATTTACGATAGTTCGTTCAATTTGGTTGAACATGATTATGGACACACTACTAGCTCTGGCTCTTACCAAGGACAAACCCACAAAAGAACTCATGGAAAAGCCACCGGTGGGCAGAACTGAGCCCTTCATCAGCAATGTCATGTGCAGGAACCTCTTGGCTCAAGCTCTGTACCAAACAACTGTCCTCTTGATATTACAGTTCAGGGGAGAAGCAATGTTTGGTGTTAATGATAAGGTAAATGGCACCTTGATCTTTAATACTTTTGTGTTTTGCCAGATGTTCAATGAGTTTAATGCCAGGAAGCTTGTGAAGAAGGATATCTTTAGGAATATCCACACCGACAAATTGTTCATGGGGATAATTGCAGTGGCAGTTATTCTACAGATTGTGACAGTGGAATTTCTAAGCAAATTTGAAGATATAGAGAGGCTGAACTACAGACTATGGGGAGTATGTCTTGGAATTGCAGCCATTTCTTGGCCAATCGGTTGGGTTGTTAAGTGTATACCTGTGCCACAGAAACCCATTTTCCACTACCTGAAGATGAAGATGAACTGA

Protein Analysis

1006

Amino Acids

110.64

Weight (kDa)

6.45

Isoelectric Point (pI)

36.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 91 - 160 5.8e-13 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 210 - 306 3.6e-20 P-type ATPase actuator domain
Cation_ATPase PF13246 471 - 638 2e-27 P-type ATPase, cytoplasmic domain N
Hydrolase PF00702 620 - 748 6.9e-08 haloacid dehalogenase-like hydrolase
Cation_ATPase_C PF00689 819 - 988 2.2e-36 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1727, 2303
AasI GACNNNNNNGTC 1 cut(s) 1887
AccB1I GGYRCC 2 cut(s) 715, 2702
AccB7I CCANNNNNTGG 1 cut(s) 2937
AccI GTMKAC 2 cut(s) 759, 2965
AciI CCGC 6 cut(s) 470, 1136, 1142, 1788, 2349, 2438
AclI AACGTT 1 cut(s) 381
AclWI GGATC 5 cut(s) 44, 1251, 1282, 1408, 1892
AcoI YGGCCR 1 cut(s) 2939
AcsI RAATTY 7 cut(s) 324, 368, 970, 2069, 2262, 2858, 2870
AcuI CTGAAG 3 cut(s) 1268, 2026, 2310
AdeI CACNNNGTG 1 cut(s) 894
AfaI GTAC 8 cut(s) 97, 202, 450, 523, 738, 1309, 1656, 2630
AfeI AGCGCT 1 cut(s) 1117
AgeI ACCGGT 1 cut(s) 2563
AjnI CCWGG 1 cut(s) 2756
AjuI GAANNNNNNNTTGG 6 cut(s) 188, 220, 663, 695, 2661, 2693
Alw21I GWGCWC 1 cut(s) 1455
Alw26I GTCTC 3 cut(s) 193, 1181, 1259
Alw44I GTGCAC 1 cut(s) 1451
AlwI GGATC 5 cut(s) 44, 1251, 1282, 1408, 1892
AlwNI CAGNNNCTG 1 cut(s) 2201
Aor51HI AGCGCT 1 cut(s) 1117
AoxI GGCC 3 cut(s) 742, 1587, 2939
ApaLI GTGCAC 1 cut(s) 1451
ApeKI GCWGC 6 cut(s) 1086, 1139, 1670, 1781, 2141, 2927
ApoI RAATTY 7 cut(s) 324, 368, 970, 2069, 2262, 2858, 2870
AsiGI ACCGGT 1 cut(s) 2563
Asp700I GAANNNNTTC 2 cut(s) 431, 818
AspLEI GCGC 2 cut(s) 1118, 2213
AspS9I GGNCC 1 cut(s) 214
AsuHPI GGTGA 4 cut(s) 911, 1345, 1748, 1963
AsuII TTCGAA 1 cut(s) 2074
AsuNHI GCTAGC 1 cut(s) 1784
AvaII GGWCC 1 cut(s) 214
BaeGI GKGCMC 1 cut(s) 1455
BaeI ACNNNNGTAYC 2 cut(s) 2009, 2042
BalI TGGCCA 1 cut(s) 2941
BanI GGYRCC 2 cut(s) 715, 2702
BanII GRGCYC 2 cut(s) 130, 2583
BbsI GAAGAC 1 cut(s) 2127
Bbv12I GWGCWC 1 cut(s) 1455
BbvI GCAGC 6 cut(s) 1098, 1126, 1657, 1793, 2128, 2939
BccI CCATC 8 cut(s) 119, 719, 816, 1219, 1321, 1534, 1856, 1948
BceAI ACGGC 1 cut(s) 1890
BciT130I CCWGG 1 cut(s) 2758
BciVI GTATCC 1 cut(s) 2010
BclI TGATCA 1 cut(s) 2421
BcoDI GTCTC 3 cut(s) 193, 1181, 1259
BfaI CTAG 5 cut(s) 60, 177, 998, 1785, 2510
BfmI CTRYAG 4 cut(s) 573, 1671, 2840, 2896
BfoI RGCGCY 2 cut(s) 1119, 2214
BfuI GTATCC 1 cut(s) 2010
BglII AGATCT 1 cut(s) 250
BisI GCNGC 9 cut(s) 471, 1087, 1137, 1140, 1671, 1782, 2142, 2439, 2928
BlsI GCNGC 9 cut(s) 472, 1088, 1138, 1141, 1672, 1783, 2143, 2440, 2929
BmcAI AGTACT 1 cut(s) 202
Bme1390I CCNGG 1 cut(s) 2758
Bme18I GGWCC 1 cut(s) 214
BmgT120I GGNCC 1 cut(s) 214
BmiI GGNNCC 6 cut(s) 65, 535, 717, 781, 2609, 2704
BmrFI CCNGG 1 cut(s) 2758
BmrI ACTGGG 1 cut(s) 1333
BmsI GCATC 2 cut(s) 2156, 2209
BmtI GCTAGC 1 cut(s) 1788
BmuI ACTGGG 1 cut(s) 1333
BpiI GAAGAC 1 cut(s) 2127
BplI GAGNNNNNCTC 2 cut(s) 117, 149
BpmI CTGGAG 2 cut(s) 913, 980
Bpu14I TTCGAA 1 cut(s) 2074
BpuEI CTTGAG 2 cut(s) 2006, 2604
BsaI GGTCTC 2 cut(s) 193, 1181
BsaJI CCNNGG 3 cut(s) 1053, 1872, 2526
BsaWI WCCGGW 3 cut(s) 184, 1794, 2563
BsaXI ACNNNNNCTCC 4 cut(s) 699, 729, 2084, 2114
Bse118I RCCGGY 2 cut(s) 718, 2563
Bse1I ACTGG 6 cut(s) 930, 1339, 1447, 1689, 2028, 2206
Bse3DI GCAATG 3 cut(s) 1245, 2599, 2679
BseBI CCWGG 1 cut(s) 2758
BseDI CCNNGG 3 cut(s) 1053, 1872, 2526
BseGI GGATG 6 cut(s) 453, 691, 872, 888, 1063, 2317
BseMI GCAATG 3 cut(s) 1245, 2599, 2679
BseMII CTCAG 4 cut(s) 333, 1500, 2307, 2568
BseNI ACTGG 6 cut(s) 930, 1339, 1447, 1689, 2028, 2206
BseRI GAGGAG 2 cut(s) 122, 1775
BseSI GKGCMC 1 cut(s) 1455
BseXI GCAGC 6 cut(s) 1098, 1126, 1657, 1793, 2128, 2939
BseYI CCCAGC 2 cut(s) 53, 2224
BsgI GTGCAG 1 cut(s) 2623
BshFI GGCC 3 cut(s) 744, 1589, 2941
BshNI GGYRCC 2 cut(s) 715, 2702
BshTI ACCGGT 1 cut(s) 2563
BsiHKAI GWGCWC 1 cut(s) 1455
BsiSI CCGG 4 cut(s) 185, 719, 1795, 2564
BslFI GGGAC 1 cut(s) 1893
BsmAI GTCTC 3 cut(s) 193, 1181, 1259
BsmFI GGGAC 1 cut(s) 1893
BsmI GAATGC 3 cut(s) 120, 867, 1572
BsnI GGCC 3 cut(s) 744, 1589, 2941
Bso31I GGTCTC 2 cut(s) 193, 1181
Bsp119I TTCGAA 1 cut(s) 2074
Bsp1286I GDGCHC 3 cut(s) 130, 1455, 2583
Bsp1407I TGTACA 2 cut(s) 736, 1654
BspACI CCGC 6 cut(s) 470, 1136, 1142, 1788, 2349, 2438
BspANI GGCC 3 cut(s) 744, 1589, 2941
BspCNI CTCAG 4 cut(s) 334, 1499, 2306, 2569
BspHI TCATGA 1 cut(s) 2032
BspLI GGNNCC 6 cut(s) 65, 535, 717, 781, 2609, 2704
BspMAI CTGCAG 2 cut(s) 577, 1675
BspOI GCTAGC 1 cut(s) 1788
BspPI GGATC 5 cut(s) 44, 1251, 1282, 1408, 1892
BspT104I TTCGAA 1 cut(s) 2074
BspT107I GGYRCC 2 cut(s) 715, 2702
BspTNI GGTCTC 2 cut(s) 193, 1181
BsrDI GCAATG 3 cut(s) 1245, 2599, 2679
BsrFI RCCGGY 2 cut(s) 718, 2563
BsrGI TGTACA 2 cut(s) 736, 1654
BsrI ACTGG 6 cut(s) 930, 1339, 1447, 1689, 2028, 2206
BssAI RCCGGY 2 cut(s) 718, 2563
BssECI CCNNGG 3 cut(s) 1053, 1872, 2526
BssNAI GTATAC 1 cut(s) 2966
BssT1I CCWWGG 3 cut(s) 1053, 1872, 2526
Bst1107I GTATAC 1 cut(s) 2966
Bst2UI CCWGG 1 cut(s) 2758
Bst4CI ACNGT 8 cut(s) 448, 676, 1648, 1742, 2063, 2641, 2658, 2854
Bst6I CTCTTC 3 cut(s) 196, 1556, 1622
BstAPI GCANNNNNTGC 1 cut(s) 1606
BstAUI TGTACA 2 cut(s) 736, 1654
BstBI TTCGAA 1 cut(s) 2074
BstC8I GCNNGC 6 cut(s) 30, 41, 546, 720, 1786, 2347
BstDEI CTNAG 6 cut(s) 342, 460, 1486, 2293, 2577, 2864
BstEII GGTNACC 1 cut(s) 1333
BstF5I GGATG 6 cut(s) 453, 691, 872, 888, 1063, 2317
BstH2I RGCGCY 2 cut(s) 1119, 2214
BstHHI GCGC 2 cut(s) 1118, 2213
BstMAI GTCTC 3 cut(s) 193, 1181, 1259
BstMWI GCNNNNNNNGC 5 cut(s) 1235, 1606, 1922, 2219, 2438
BstNI CCWGG 1 cut(s) 2758
BstNSI RCATGY 3 cut(s) 32, 43, 2349
BstPI GGTNACC 1 cut(s) 1333
BstSCI CCNGG 1 cut(s) 2756
BstSFI CTRYAG 4 cut(s) 573, 1671, 2840, 2896
BstSLI GKGCMC 1 cut(s) 1455
BstV1I GCAGC 6 cut(s) 1098, 1126, 1657, 1793, 2128, 2939
BstV2I GAAGAC 1 cut(s) 2127
BstX2I RGATCY 4 cut(s) 250, 1243, 1274, 1897
BstXI CCANNNNNNTGG 2 cut(s) 1156, 2949
BstYI RGATCY 4 cut(s) 250, 1243, 1274, 1897
BstZ17I GTATAC 1 cut(s) 2966
BsuI GTATCC 1 cut(s) 2010
BsuRI GGCC 3 cut(s) 744, 1589, 2941
BtgZI GCGATG 1 cut(s) 2179
BtsCI GGATG 6 cut(s) 453, 691, 872, 888, 1063, 2317
BtsI GCAGTG 4 cut(s) 1986, 2058, 2202, 2832
Cac8I GCNNGC 6 cut(s) 30, 41, 546, 720, 1786, 2347
CaiI CAGNNNCTG 1 cut(s) 2201
CciI TCATGA 1 cut(s) 2032
CfoI GCGC 2 cut(s) 1118, 2213
Cfr10I RCCGGY 2 cut(s) 718, 2563
Cfr13I GGNCC 1 cut(s) 214
Csp6I GTAC 8 cut(s) 96, 201, 449, 522, 737, 1308, 1655, 2629
CspAI ACCGGT 1 cut(s) 2563
CviQI GTAC 8 cut(s) 96, 201, 449, 522, 737, 1308, 1655, 2629
DdeI CTNAG 6 cut(s) 342, 460, 1486, 2293, 2577, 2864
DraIII CACNNNGTG 1 cut(s) 894
DrdI GACNNNNNNGTC 1 cut(s) 1887
DseDI GACNNNNNNGTC 1 cut(s) 1887
EaeI YGGCCR 1 cut(s) 2939
Eam1104I CTCTTC 3 cut(s) 196, 1556, 1622
EarI CTCTTC 3 cut(s) 196, 1556, 1622
Eco130I CCWWGG 3 cut(s) 1053, 1872, 2526
Eco147I AGGCCT 1 cut(s) 1589
Eco24I GRGCYC 2 cut(s) 130, 2583
Eco31I GGTCTC 2 cut(s) 193, 1181
Eco32I GATATC 1 cut(s) 2779
Eco47I GGWCC 1 cut(s) 214
Eco47III AGCGCT 1 cut(s) 1117
Eco57I CTGAAG 3 cut(s) 1268, 2026, 2310
Eco91I GGTNACC 1 cut(s) 1333
EcoO65I GGTNACC 1 cut(s) 1333
EcoRI GAATTC 3 cut(s) 324, 368, 2262
EcoRII CCWGG 1 cut(s) 2756
EcoRV GATATC 1 cut(s) 2779
EcoT14I CCWWGG 3 cut(s) 1053, 1872, 2526
EcoT22I ATGCAT 2 cut(s) 24, 30
EcoT38I GRGCYC 2 cut(s) 130, 2583
ErhI CCWWGG 3 cut(s) 1053, 1872, 2526
FalI AAGNNNNNCTT 2 cut(s) 2765, 2797
FaqI GGGAC 1 cut(s) 1893
FauNDI CATATG 1 cut(s) 24
FbaI TGATCA 1 cut(s) 2421
FblI GTMKAC 2 cut(s) 759, 2965
Fnu4HI GCNGC 9 cut(s) 471, 1087, 1137, 1140, 1671, 1782, 2142, 2439, 2928
FokI GGATG 6 cut(s) 440, 698, 859, 895, 1070, 2324
FriOI GRGCYC 2 cut(s) 130, 2583
Fsp4HI GCNGC 9 cut(s) 471, 1087, 1137, 1140, 1671, 1782, 2142, 2439, 2928
FspBI CTAG 5 cut(s) 60, 177, 998, 1785, 2510
GlaI GCGC 2 cut(s) 1117, 2212
GluI GCNGC 9 cut(s) 471, 1087, 1137, 1140, 1671, 1782, 2142, 2439, 2928
GsaI CCCAGC 2 cut(s) 57, 2228
GsuI CTGGAG 2 cut(s) 913, 980
HaeII RGCGCY 2 cut(s) 1119, 2214
HaeIII GGCC 3 cut(s) 744, 1589, 2941
HapII CCGG 4 cut(s) 185, 719, 1795, 2564
HhaI GCGC 2 cut(s) 1118, 2213
Hin6I GCGC 2 cut(s) 1116, 2211
HinP1I GCGC 2 cut(s) 1116, 2211
HindIII AAGCTT 3 cut(s) 1374, 2150, 2762
HpaII CCGG 4 cut(s) 185, 719, 1795, 2564
HphI GGTGA 4 cut(s) 911, 1345, 1748, 1963
Hpy166II GTNNAC 5 cut(s) 214, 385, 760, 1453, 2966
Hpy188I TCNGA 8 cut(s) 7, 310, 343, 813, 1248, 1387, 1434, 2296
Hpy188III TCNNGA 9 cut(s) 353, 697, 831, 959, 1169, 1716, 1910, 2033, 2647
Hpy8I GTNNAC 5 cut(s) 214, 385, 760, 1453, 2966
HpyCH4III ACNGT 8 cut(s) 448, 676, 1648, 1742, 2063, 2641, 2658, 2854
HpyCH4IV ACGT 3 cut(s) 381, 893, 955
HpyF10VI GCNNNNNNNGC 5 cut(s) 1235, 1606, 1922, 2219, 2438
HpyF3I CTNAG 6 cut(s) 342, 460, 1486, 2293, 2577, 2864
HpySE526I ACGT 3 cut(s) 381, 893, 955
HspAI GCGC 2 cut(s) 1116, 2211
KroI GCCGGC 1 cut(s) 718
KroNI GCCGGC 1 cut(s) 720
Ksp22I TGATCA 1 cut(s) 2421
LmnI GCTCC 3 cut(s) 69, 1667, 2048
Lsp1109I GCAGC 6 cut(s) 1098, 1126, 1657, 1793, 2128, 2939
LweI GCATC 2 cut(s) 2156, 2209
MaeI CTAG 5 cut(s) 60, 177, 998, 1785, 2510
MaeII ACGT 3 cut(s) 381, 893, 955
MaeIII GTNAC 8 cut(s) 611, 868, 1279, 1333, 1700, 1736, 2197, 2848
MflI RGATCY 4 cut(s) 250, 1243, 1274, 1897
MhlI GDGCHC 3 cut(s) 130, 1455, 2583
MlsI TGGCCA 1 cut(s) 2941
MluNI TGGCCA 1 cut(s) 2941
MlyI GAGTC 3 cut(s) 920, 1713, 1785
MmeI TCCRAC 2 cut(s) 38, 1520
Mox20I TGGCCA 1 cut(s) 2941
Mph1103I ATGCAT 2 cut(s) 24, 30
MroNI GCCGGC 1 cut(s) 718
MroXI GAANNNNTTC 2 cut(s) 431, 818
MscI TGGCCA 1 cut(s) 2941
MseI TTAA 8 cut(s) 69, 977, 1530, 1893, 2685, 2715, 2751, 2958
MslI CAYNNNNRTG 5 cut(s) 23, 27, 566, 1154, 2495
Msp20I TGGCCA 1 cut(s) 2941
MspI CCGG 4 cut(s) 185, 719, 1795, 2564
MspR9I CCNGG 1 cut(s) 2758
Mva1269I GAATGC 3 cut(s) 120, 867, 1572
MvaI CCWGG 1 cut(s) 2758
MwoI GCNNNNNNNGC 5 cut(s) 1235, 1606, 1922, 2219, 2438
NaeI GCCGGC 1 cut(s) 720
NdeI CATATG 1 cut(s) 24
NgoMIV GCCGGC 1 cut(s) 718
NheI GCTAGC 1 cut(s) 1784
NlaIV GGNNCC 6 cut(s) 65, 535, 717, 781, 2609, 2704
NmeAIII GCCGAG 1 cut(s) 211
NmuCI GTSAC 5 cut(s) 868, 1333, 1736, 2197, 2848
NsiI ATGCAT 2 cut(s) 24, 30
NspI RCATGY 3 cut(s) 32, 43, 2349
NspV TTCGAA 1 cut(s) 2074
PaeI GCATGC 3 cut(s) 32, 43, 2349
PagI TCATGA 1 cut(s) 2032
PceI AGGCCT 1 cut(s) 1589
PcsI WCGNNNNNNNCGW 1 cut(s) 378
PctI GAATGC 3 cut(s) 120, 867, 1572
PdiI GCCGGC 1 cut(s) 720
PdmI GAANNNNTTC 2 cut(s) 431, 818
PfeI GAWTC 8 cut(s) 8, 338, 360, 507, 764, 814, 1469, 1595
PflMI CCANNNNNTGG 1 cut(s) 2937
PinAI ACCGGT 1 cut(s) 2563
PkrI GCNGC 9 cut(s) 472, 1088, 1138, 1141, 1672, 1783, 2143, 2440, 2929
PleI GAGTC 3 cut(s) 920, 1713, 1785
PpsI GAGTC 3 cut(s) 920, 1713, 1785
PsiI TTATAA 2 cut(s) 1727, 2303
Psp1406I AACGTT 1 cut(s) 381
Psp6I CCWGG 1 cut(s) 2756
PspEI GGTNACC 1 cut(s) 1333
PspFI CCCAGC 2 cut(s) 53, 2224
PspGI CCWGG 1 cut(s) 2756
PspN4I GGNNCC 6 cut(s) 65, 535, 717, 781, 2609, 2704
PspPI GGNCC 1 cut(s) 214
PstI CTGCAG 2 cut(s) 577, 1675
PstNI CAGNNNCTG 1 cut(s) 2201
PsuI RGATCY 4 cut(s) 250, 1243, 1274, 1897
RsaI GTAC 8 cut(s) 97, 202, 450, 523, 738, 1309, 1656, 2630
RsaNI GTAC 8 cut(s) 96, 201, 449, 522, 737, 1308, 1655, 2629
RseI CAYNNNNRTG 5 cut(s) 23, 27, 566, 1154, 2495
SaqAI TTAA 8 cut(s) 69, 977, 1530, 1893, 2685, 2715, 2751, 2958
SatI GCNGC 9 cut(s) 471, 1087, 1137, 1140, 1671, 1782, 2142, 2439, 2928
Sau96I GGNCC 1 cut(s) 214
ScaI AGTACT 1 cut(s) 202
SchI GAGTC 3 cut(s) 920, 1713, 1785
ScrFI CCNGG 1 cut(s) 2758
SduI GDGCHC 3 cut(s) 130, 1455, 2583
SfaNI GCATC 2 cut(s) 2156, 2209
SfcI CTRYAG 4 cut(s) 573, 1671, 2840, 2896
SfuI TTCGAA 1 cut(s) 2074
SgrAI CRCCGGYG 1 cut(s) 2563
SinI GGWCC 1 cut(s) 214
SmiMI CAYNNNNRTG 5 cut(s) 23, 27, 566, 1154, 2495
SmlI CTYRAG 2 cut(s) 2021, 2619
SmoI CTYRAG 2 cut(s) 2021, 2619
SphI GCATGC 3 cut(s) 32, 43, 2349
SseBI AGGCCT 1 cut(s) 1589
SsiI CCGC 6 cut(s) 470, 1136, 1142, 1788, 2349, 2438
SspI AATATT 3 cut(s) 703, 1358, 1981
SspMI CTAG 5 cut(s) 60, 177, 998, 1785, 2510
StuI AGGCCT 1 cut(s) 1589
StyD4I CCNGG 1 cut(s) 2756
StyI CCWWGG 3 cut(s) 1053, 1872, 2526
TaaI ACNGT 8 cut(s) 448, 676, 1648, 1742, 2063, 2641, 2658, 2854
TaiI ACGT 3 cut(s) 384, 896, 958
TaqI TCGA 4 cut(s) 124, 859, 1033, 2074
TatI WGTACW 5 cut(s) 200, 448, 521, 736, 1654
TauI GCSGC 3 cut(s) 473, 1139, 2441
TfiI GAWTC 8 cut(s) 8, 338, 360, 507, 764, 814, 1469, 1595
Tru1I TTAA 8 cut(s) 69, 977, 1530, 1893, 2685, 2715, 2751, 2958
Tru9I TTAA 8 cut(s) 69, 977, 1530, 1893, 2685, 2715, 2751, 2958
TseFI GTSAC 5 cut(s) 868, 1333, 1736, 2197, 2848
TseI GCWGC 6 cut(s) 1086, 1139, 1670, 1781, 2141, 2927
Tsp45I GTSAC 5 cut(s) 868, 1333, 1736, 2197, 2848
TspGWI ACGGA 4 cut(s) 404, 556, 865, 2324
Van91I CCANNNNNTGG 1 cut(s) 2937
VneI GTGCAC 1 cut(s) 1451
VpaK11BI GGWCC 1 cut(s) 214
XapI RAATTY 7 cut(s) 324, 368, 970, 2069, 2262, 2858, 2870
XceI RCATGY 3 cut(s) 32, 43, 2349
XcmI CCANNNNNNNNNTGG 1 cut(s) 1156
XmiI GTMKAC 2 cut(s) 759, 2965
XmnI GAANNNNTTC 2 cut(s) 431, 818
XspI CTAG 5 cut(s) 60, 177, 998, 1785, 2510
ZrmI AGTACT 1 cut(s) 202
Zsp2I ATGCAT 2 cut(s) 24, 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.