Rh4CG023900

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
4592173 .. 4595280
3108 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG023900.1

Sequence Viewer

Length: 3108 bp
ATGTCCAAGTCTACCACCATGCATGCAAAGTTGGGGAGCATTGAGTTGCTGCTTGATGTTCCGAGCACGGGTCCTGGCATCAGCAAAAGAAAATGGCATTCTGTTTTCATTACCATCTACAGCTCTAGAGCCTTCCTCTCTTTACGACCTTCTACTCTTCCCAAACATACCAACTCCACATTCATATCTCGCACACTCTCTTACTCCATTGTTAGGGTCGAGCCAGTCCCGGTGCCAGCCATTAATGGATTCAAAGCAGACCAAAAAAGCCTCACTGAGCTTGTGAAGGAGAAAAAATTCAAGGAGCTCTTGGAGCTTGGAGGGGTTGAAGAAGTAGCATCAGCTCTCAAAACTGATGCAGAGCATGGAATCAATGGTGATGATGCTGAAGACATTGCGTGCAGACACGAAGCATTTGGTTCCAACACATACAAGAAACCGCCAACGCAAGGATTCCTCCATTTTGTGTGGGAAGCCTTCAAAGACCTCACAATTCTCATTCTTTTAGGCTGTGCTGCGCTCTCTCTTGGTTTTGGTATAAAAGAGCATGGACTAAAAGAAGGTTGGATTGATGGTGGAAGCATTTGTCTCGCGGTCATTCTGGTCATTTCTGTTTCCGCAATAAGCAACTACAGACAGAGCAGACAGTTTGACAAGCTGTCGAAAGTCAGCAACAATCTCCAGATTGAAGCTGTGAGAAATGGAAGGCGCCAACTGATTTCAATATTCGAAATTGTAGTGGGCGATGTCATCTGCTTGAAAATTGGAGATCAAGTTCCAGCTGATGGATTACTTCTAGAAGGCCACTCTTTATCAGTTGACGAATCAAGCATGACCGGGGAGAGCGACCATGTTGAGATTAGGGTCACTGAGAATCCTTTCTTGTTCTCTGGGACTAAAATAGCAGATGGTTATGGTCGCATGCTTGTCACATCAGTAGGGATGAACACGAATTGGGGTGAAATGATGAGCCAAATTAGCCAAGAAACCAGTGAAAAGACACCCCTTCAAGCACGTCTAGACAAGCTAACTTCTTCGATAGGTAAAGTTGGTTTGGCAGTTGCTTTCTTTGTTCTTGTAGTCATGTTGGTCAGATACTTCACAGGGAACACCGAGGATGAGAACGGAAATAAAGAGTACAATGGCAGCAAAACCAAATCTGATGACATAATAAACGCTGTCATTGGGATTGTAGCAGCAGCAGTTACAATTGTTGTGGTAGCAATTCCAGAAGGTCTACCATTAGCTGTGACTCTCACTCTTGCATATTCCATGAAGAGAATGATGGTTGATAATGCAATGGTCCGGAAGCTCTCTGCTTGTGAGACCATGGGATCTGCTACAACAATTTGTACCGACAAAACAGGCACTCTGACCATGAACCAGATGAAGGTAACTAAGTTTTGGTTGGGGAAAGAATCTGTGGAAGAAGAAGCTTATTCATCTATTTCTCCTTATGTTCTCAACTTGATCCAAGAAGGGGTTTCTCTCAACACAACTGGTAGTGTGTACAGGCCTAGCTTGGATTCCGAAATTGAGATCTCTGGCAGTCCCACTGAAAAGGCCATTCTTTCATGGGTAGTACATGGGTCGAAGATAAATATGGAGAAAGTGGTGAAGAGCTGTAGCATTCTCCATGTCGAAGCCTTTAATTCGAAGAAGAAACAAAGTGGAGTTCTGGTGAAGAGAAAGGCAGACTATTCAATCCATGTACACAGGAAAGGAGCAGCAGAAATGATATTAACAATGTGTACAAGTTACTATGATGCCTCTGGAATTGTTAAGGATATGGATTACAATGAAAAAAAGAACTTTGAGCAGATTATTCAAGGTATGGCAGCCAGCAGCCTCAGATGCATCGCATTCGCACATAAAGAAGTTCCAGCAGAGGAGCAAGTTGAAGGAGACCAGCAAGTTGTGCTAAAGGAAGATGGATTGACCCTATTGGGACTTGTGGGCCTTAAAGATCCATGTCGTCCAGGTGTGAGAAAAGCAGTTGAAGATTGCCAATATGCAGGGGTGAACGTCAAAATGATTACCGGAGACAATGTTTTCACTGCAAAAGCCATAGCCACTGAGTGTGGGATACTCAGGCCTGGTCAGGACATGCTCGGAGCAGTCATAGAAGGTGTTGAATTTCGCAACTACACACCAGAAGAGAGAATGGAGAAAGTTGAGAAAATTTCCGTGATGGCAAGGTCTTCTCCGTTTGATAAGCTTCTAATGGTGCAATGCTTGAAACAGAAAGGTCATGTAGTTGCAGTGACGGGTGATGGCACCAATGATGCACCAGCATTAAAAGAAGCTGATATAGGACTTTCCATGGGGATTCAAGGAACAGAAGTGGCTAAAGAGAGCTCAGATATTGTGATCATGGATGATAACTTTGCTTCAGTTGCGACAGTTTTGATGTGGGGAAGATGTGTGTACAATAATATCCAGAAGTTCATACAATTCCAACTCACTGTCAATGTTGCAGCTCTTGTGATCAACTTTGTTGCAGCAGTTTCAGCAGGTCAAGTCCCATTAACAGCAGTTCAGTTATTGTGGGTCAACTTGATCATGGACACACTTGGAGCTCTTGCTCTTGCCACAGAAAAACCCACAAGAGAACTGATGGAGAAGCCACCAGTGGGAAGGACAGCGCCTCTCATCACAAACATCATGTGGAGGAACCTCTTGCCTCAAGCACTGTACCAGATAACTGTCCTCTTGATGTTACAATTCAGGGGGAAAGCAATCTTTGGTGTCACTGATAAGGTAAAGGACACATTGATCTTCAACACTTTTGTGCTTTGCCAGGTGTTCAATGAGTTCAATGCGAGGAAGCTAGAGAAGAAGAATGTGTTCAAGGGAATACATACCAATAAGTTGTTCATGGGGATCATTGCAGTTACAATTGTTCTTCAGGTCGTGATGGTGGAGGTTCTTAAGAAATTTGCAGATACAGAGAGGTTGAATTGGGGACAATGGGGTGTATGCATAGGGATTGCAGTCATCTCTTGGCCAATTGGTTGGCTAGTCAAGTCTATACCTGTTCCAAAGAAACCCATTTTCAGCTATCTGAAGATGAAGAAAAATAAGCACCCCAGAAGAACTTCAACATGA

Protein Analysis

1035

Amino Acids

113.64

Weight (kDa)

8.44

Isoelectric Point (pI)

30.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 106 - 175 4.4e-14 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 231 - 326 1.3e-20 P-type ATPase actuator domain
Hydrolase PF00702 449 - 770 1.5e-13 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 489 - 660 3e-27 P-type ATPase, cytoplasmic domain N
Cation_ATPase_C PF00689 841 - 1010 4.2e-48 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2504
AccB1I GGYRCC 3 cut(s) 232, 708, 2276
AccB7I CCANNNNNTGG 1 cut(s) 785
AccI GTMKAC 2 cut(s) 11, 1237
AccII CGCG 1 cut(s) 593
AccIII TCCGGA 1 cut(s) 1305
AciI CCGC 3 cut(s) 440, 593, 618
AclWI GGATC 4 cut(s) 1342, 1465, 1961, 2891
AcoI YGGCCR 1 cut(s) 3005
AcsI RAATTY 4 cut(s) 296, 2135, 2181, 2936
AcuI CTGAAG 4 cut(s) 408, 2376, 2891, 3086
AcyI GRCGYC 1 cut(s) 709
AdeI CACNNNGTG 1 cut(s) 2079
AfaI GTAC 8 cut(s) 1139, 1354, 1511, 1584, 1713, 1753, 2429, 2696
AfiI CCNNNNNNNGG 7 cut(s) 68, 213, 449, 785, 1390, 1480, 2633
AflII CTTAAG 1 cut(s) 2930
AhdI GACNNNNNGTC 1 cut(s) 658
AjiI CACGTC 1 cut(s) 1016
AjnI CCWGG 4 cut(s) 73, 1978, 2095, 2799
AjuI GAANNNNNNNTTGG 4 cut(s) 164, 196, 2858, 2890
AleI CACNNNNGTG 1 cut(s) 2789
AloI GAACNNNNNNTCC 2 cut(s) 759, 791
Alw21I GWGCWC 4 cut(s) 68, 309, 2360, 2581
Alw26I GTCTC 4 cut(s) 593, 1319, 1899, 2037
AlwI GGATC 4 cut(s) 1342, 1465, 1961, 2891
Aor13HI TCCGGA 1 cut(s) 1305
AoxI GGCC 6 cut(s) 802, 1514, 1563, 1957, 2093, 3005
ApoI RAATTY 4 cut(s) 296, 2135, 2181, 2936
AseI ATTAAT 1 cut(s) 243
Asp700I GAANNNNTTC 4 cut(s) 296, 878, 2846, 3097
AspLEI GCGC 3 cut(s) 520, 711, 2647
AspS9I GGNCC 3 cut(s) 71, 1303, 1957
AsuC2I CCSGG 2 cut(s) 230, 838
AsuHPI GGTGA 6 cut(s) 389, 971, 1627, 1693, 2032, 2282
AsuII TTCGAA 2 cut(s) 729, 1655
AvaII GGWCC 2 cut(s) 71, 1303
BalI TGGCCA 1 cut(s) 3007
BanI GGYRCC 3 cut(s) 232, 708, 2276
BanII GRGCYC 3 cut(s) 309, 2360, 2581
BbsI GAAGAC 2 cut(s) 396, 2193
Bbv12I GWGCWC 4 cut(s) 68, 309, 2360, 2581
BcgI CGANNNNNNTGC 4 cut(s) 571, 605, 1846, 1880
BciT130I CCWGG 4 cut(s) 75, 1980, 2097, 2801
BciVI GTATCC 1 cut(s) 2079
BclI TGATCA 3 cut(s) 2370, 2487, 2559
BcnI CCSGG 2 cut(s) 230, 838
BcoDI GTCTC 4 cut(s) 593, 1319, 1899, 2037
BfaI CTAG 6 cut(s) 126, 797, 1019, 1518, 2831, 3020
BfmI CTRYAG 3 cut(s) 118, 631, 1624
BfoI RGCGCY 2 cut(s) 712, 2648
BfrI CTTAAG 1 cut(s) 2930
BfuAI ACCTGC 1 cut(s) 2504
BfuI GTATCC 1 cut(s) 2079
BglII AGATCT 1 cut(s) 1539
Bme1390I CCNGG 6 cut(s) 75, 230, 838, 1980, 2097, 2801
Bme18I GGWCC 2 cut(s) 71, 1303
BmeRI GACNNNNNGTC 1 cut(s) 658
BmgBI CACGTC 1 cut(s) 1016
BmgT120I GGNCC 3 cut(s) 71, 1303, 1957
BmiI GGNNCC 6 cut(s) 72, 234, 421, 710, 2278, 2675
BmrFI CCNGG 6 cut(s) 75, 230, 838, 1980, 2097, 2801
BmsI GCATC 8 cut(s) 87, 346, 347, 373, 1756, 1844, 1866, 2275
BpiI GAAGAC 2 cut(s) 396, 2193
BplI GAGNNNNNCTC 2 cut(s) 120, 152
BpmI CTGGAG 1 cut(s) 665
Bpu14I TTCGAA 2 cut(s) 729, 1655
BpuEI CTTGAG 1 cut(s) 2670
BpuMI CCSGG 2 cut(s) 230, 838
BsaHI GRCGYC 1 cut(s) 709
BsaI GGTCTC 2 cut(s) 1319, 1899
BsaJI CCNNGG 4 cut(s) 837, 1113, 1329, 2322
BsaWI WCCGGW 2 cut(s) 1305, 2039
BsaXI ACNNNNNCTCC 6 cut(s) 759, 789, 1665, 1695, 2034, 2064
Bsc4I CCNNNNNNNGG 7 cut(s) 68, 213, 449, 785, 1390, 1480, 2633
Bse1I ACTGG 4 cut(s) 224, 990, 1504, 2630
Bse3DI GCAATG 4 cut(s) 393, 1305, 2237, 2886
BseAI TCCGGA 1 cut(s) 1305
BseBI CCWGG 4 cut(s) 75, 1980, 2097, 2801
BseDI CCNNGG 4 cut(s) 837, 1113, 1329, 2322
BseGI GGATG 3 cut(s) 948, 1123, 2383
BseLI CCNNNNNNNGG 7 cut(s) 68, 213, 449, 785, 1390, 1480, 2633
BseMI GCAATG 4 cut(s) 393, 1305, 2237, 2886
BseMII CTCAG 6 cut(s) 267, 861, 1864, 2067, 2104, 2373
BseNI ACTGG 4 cut(s) 224, 990, 1504, 2630
BseRI GAGGAG 1 cut(s) 1904
BsgI GTGCAG 1 cut(s) 421
Bsh1236I CGCG 1 cut(s) 593
BshFI GGCC 6 cut(s) 804, 1516, 1565, 1959, 2095, 3007
BshNI GGYRCC 3 cut(s) 232, 708, 2276
BsiHKAI GWGCWC 4 cut(s) 68, 309, 2360, 2581
BsiSI CCGG 4 cut(s) 230, 837, 1306, 2040
BslFI GGGAC 6 cut(s) 212, 907, 1536, 1962, 2507, 2979
BslI CCNNNNNNNGG 7 cut(s) 68, 213, 449, 785, 1390, 1480, 2633
BsmAI GTCTC 4 cut(s) 593, 1319, 1899, 2037
BsmFI GGGAC 6 cut(s) 212, 907, 1536, 1962, 2507, 2979
BsmI GAATGC 3 cut(s) 97, 1629, 1862
BsnI GGCC 6 cut(s) 804, 1516, 1565, 1959, 2095, 3007
Bso31I GGTCTC 2 cut(s) 1319, 1899
Bsp119I TTCGAA 2 cut(s) 729, 1655
Bsp1286I GDGCHC 4 cut(s) 68, 309, 2360, 2581
Bsp13I TCCGGA 1 cut(s) 1305
Bsp1407I TGTACA 4 cut(s) 1509, 1711, 1751, 2427
Bsp19I CCATGG 2 cut(s) 1329, 2322
BspACI CCGC 3 cut(s) 440, 593, 618
BspANI GGCC 6 cut(s) 804, 1516, 1565, 1959, 2095, 3007
BspCNI CTCAG 6 cut(s) 268, 862, 1863, 2068, 2103, 2372
BspEI TCCGGA 1 cut(s) 1305
BspFNI CGCG 1 cut(s) 593
BspLI GGNNCC 6 cut(s) 72, 234, 421, 710, 2278, 2675
BspMI ACCTGC 1 cut(s) 2504
BspPI GGATC 4 cut(s) 1342, 1465, 1961, 2891
BspQI GCTCTTC 1 cut(s) 1613
BspT104I TTCGAA 2 cut(s) 729, 1655
BspT107I GGYRCC 3 cut(s) 232, 708, 2276
BspTI CTTAAG 1 cut(s) 2930
BspTNI GGTCTC 2 cut(s) 1319, 1899
BsrDI GCAATG 4 cut(s) 393, 1305, 2237, 2886
BsrGI TGTACA 4 cut(s) 1509, 1711, 1751, 2427
BsrI ACTGG 4 cut(s) 224, 990, 1504, 2630
BssECI CCNNGG 4 cut(s) 837, 1113, 1329, 2322
BssNI GRCGYC 1 cut(s) 709
BssT1I CCWWGG 2 cut(s) 1329, 2322
Bst2UI CCWGG 4 cut(s) 75, 1980, 2097, 2801
Bst4CI ACNGT 5 cut(s) 648, 2404, 2467, 2694, 2707
Bst6I CTCTTC 5 cut(s) 162, 1271, 1613, 1679, 2151
BstACI GRCGYC 1 cut(s) 709
BstAFI CTTAAG 1 cut(s) 2930
BstAPI GCANNNNNTGC 1 cut(s) 1918
BstAUI TGTACA 4 cut(s) 1509, 1711, 1751, 2427
BstBI TTCGAA 2 cut(s) 729, 1655
BstC8I GCNNGC 5 cut(s) 24, 237, 400, 923, 1843
BstDEI CTNAG 7 cut(s) 276, 870, 1398, 1850, 2076, 2090, 2359
BstDSI CCRYGG 2 cut(s) 1329, 2322
BstF5I GGATG 3 cut(s) 948, 1123, 2383
BstFNI CGCG 1 cut(s) 593
BstH2I RGCGCY 2 cut(s) 712, 2648
BstHHI GCGC 3 cut(s) 520, 711, 2647
BstMAI GTCTC 4 cut(s) 593, 1319, 1899, 2037
BstMWI GCNNNNNNNGC 6 cut(s) 313, 978, 1854, 1918, 2396, 2510
BstNI CCWGG 4 cut(s) 75, 1980, 2097, 2801
BstNSI RCATGY 3 cut(s) 26, 925, 2110
BstSCI CCNGG 6 cut(s) 73, 228, 836, 1978, 2095, 2799
BstSFI CTRYAG 3 cut(s) 118, 631, 1624
BstUI CGCG 1 cut(s) 593
BstV2I GAAGAC 2 cut(s) 396, 2193
BstX2I RGATCY 3 cut(s) 1334, 1539, 1966
BstXI CCANNNNNNTGG 1 cut(s) 3015
BstYI RGATCY 3 cut(s) 1334, 1539, 1966
BsuI GTATCC 1 cut(s) 2079
BsuRI GGCC 6 cut(s) 804, 1516, 1565, 1959, 2095, 3007
BtgI CCRYGG 2 cut(s) 1329, 2322
BtgZI GCGATG 2 cut(s) 759, 1843
BtrI CACGTC 1 cut(s) 1016
BtsCI GGATG 3 cut(s) 948, 1123, 2383
BtsI GCAGTG 2 cut(s) 2055, 2268
BveI ACCTGC 1 cut(s) 2504
Cac8I GCNNGC 5 cut(s) 24, 237, 400, 923, 1843
CfoI GCGC 3 cut(s) 520, 711, 2647
Cfr13I GGNCC 3 cut(s) 71, 1303, 1957
Csp6I GTAC 8 cut(s) 1138, 1353, 1510, 1583, 1712, 1752, 2428, 2695
CspCI CAANNNNNGTGG 2 cut(s) 1197, 1232
CviQI GTAC 8 cut(s) 1138, 1353, 1510, 1583, 1712, 1752, 2428, 2695
DdeI CTNAG 7 cut(s) 276, 870, 1398, 1850, 2076, 2090, 2359
DinI GGCGCC 1 cut(s) 710
DraIII CACNNNGTG 1 cut(s) 2079
DriI GACNNNNNGTC 1 cut(s) 658
EaeI YGGCCR 1 cut(s) 3005
Eam1104I CTCTTC 5 cut(s) 162, 1271, 1613, 1679, 2151
Eam1105I GACNNNNNGTC 1 cut(s) 658
EarI CTCTTC 5 cut(s) 162, 1271, 1613, 1679, 2151
Ecl136II GAGCTC 3 cut(s) 307, 2358, 2579
Eco130I CCWWGG 2 cut(s) 1329, 2322
Eco147I AGGCCT 2 cut(s) 1516, 2095
Eco24I GRGCYC 3 cut(s) 309, 2360, 2581
Eco31I GGTCTC 2 cut(s) 1319, 1899
Eco47I GGWCC 2 cut(s) 71, 1303
Eco53kI GAGCTC 3 cut(s) 307, 2358, 2579
Eco57I CTGAAG 4 cut(s) 408, 2376, 2891, 3086
EcoICRI GAGCTC 3 cut(s) 307, 2358, 2579
EcoO109I RGGNCCY 1 cut(s) 71
EcoRII CCWGG 4 cut(s) 73, 1978, 2095, 2799
EcoT14I CCWWGG 2 cut(s) 1329, 2322
EcoT22I ATGCAT 3 cut(s) 24, 1859, 2984
EcoT38I GRGCYC 3 cut(s) 309, 2360, 2581
EgeI GGCGCC 1 cut(s) 710
EheI GGCGCC 1 cut(s) 710
ErhI CCWWGG 2 cut(s) 1329, 2322
FalI AAGNNNNNCTT 2 cut(s) 293, 325
FaqI GGGAC 6 cut(s) 212, 907, 1536, 1962, 2507, 2979
FbaI TGATCA 3 cut(s) 2370, 2487, 2559
FblI GTMKAC 2 cut(s) 11, 1237
FokI GGATG 3 cut(s) 955, 1130, 2390
FriOI GRGCYC 3 cut(s) 309, 2360, 2581
FspBI CTAG 6 cut(s) 126, 797, 1019, 1518, 2831, 3020
GlaI GCGC 3 cut(s) 519, 710, 2646
GsuI CTGGAG 1 cut(s) 665
HaeII RGCGCY 2 cut(s) 712, 2648
HaeIII GGCC 6 cut(s) 804, 1516, 1565, 1959, 2095, 3007
HapII CCGG 4 cut(s) 230, 837, 1306, 2040
HhaI GCGC 3 cut(s) 520, 711, 2647
Hin1I GRCGYC 1 cut(s) 709
Hin6I GCGC 3 cut(s) 518, 709, 2645
HinP1I GCGC 3 cut(s) 518, 709, 2645
HincII GTYRAC 2 cut(s) 820, 2554
HindII GTYRAC 2 cut(s) 820, 2554
HindIII AAGCTT 2 cut(s) 1434, 2216
HinfI GANTC 9 cut(s) 249, 369, 453, 824, 874, 1252, 1418, 1526, 2329
HpaII CCGG 4 cut(s) 230, 837, 1306, 2040
HphI GGTGA 6 cut(s) 389, 971, 1627, 1693, 2032, 2282
Hpy166II GTNNAC 9 cut(s) 12, 820, 1238, 1510, 1714, 1752, 2023, 2428, 2554
Hpy188I TCNGA 9 cut(s) 63, 1094, 1162, 1374, 1531, 1853, 2114, 2362, 3066
Hpy8I GTNNAC 9 cut(s) 12, 820, 1238, 1510, 1714, 1752, 2023, 2428, 2554
HpyCH4III ACNGT 5 cut(s) 648, 2404, 2467, 2694, 2707
HpyCH4IV ACGT 2 cut(s) 1015, 2025
HpyF10VI GCNNNNNNNGC 6 cut(s) 313, 978, 1854, 1918, 2396, 2510
HpyF3I CTNAG 7 cut(s) 276, 870, 1398, 1850, 2076, 2090, 2359
HpySE526I ACGT 2 cut(s) 1015, 2025
Hsp92I GRCGYC 1 cut(s) 709
HspAI GCGC 3 cut(s) 518, 709, 2645
KasI GGCGCC 1 cut(s) 708
Kpn2I TCCGGA 1 cut(s) 1305
Ksp22I TGATCA 3 cut(s) 2370, 2487, 2559
LguI GCTCTTC 1 cut(s) 1613
LmnI GCTCC 7 cut(s) 36, 304, 313, 1724, 1891, 2114, 2576
LweI GCATC 8 cut(s) 87, 346, 347, 373, 1756, 1844, 1866, 2275
MaeI CTAG 6 cut(s) 126, 797, 1019, 1518, 2831, 3020
MaeII ACGT 2 cut(s) 1015, 2025
MfeI CAATTG 3 cut(s) 1209, 2898, 3009
MflI RGATCY 3 cut(s) 1334, 1539, 1966
MhlI GDGCHC 4 cut(s) 68, 309, 2360, 2581
MlsI TGGCCA 1 cut(s) 3007
MluNI TGGCCA 1 cut(s) 3007
Mly113I GGCGCC 1 cut(s) 709
MlyI GAGTC 1 cut(s) 1246
MmeI TCCRAC 3 cut(s) 447, 545, 2482
Mox20I TGGCCA 1 cut(s) 3007
Mph1103I ATGCAT 3 cut(s) 24, 1859, 2984
MroI TCCGGA 1 cut(s) 1305
MroXI GAANNNNTTC 4 cut(s) 296, 878, 2846, 3097
MscI TGGCCA 1 cut(s) 3007
MseI TTAA 8 cut(s) 243, 1650, 1742, 1782, 1962, 2297, 2528, 2931
MslI CAYNNNNRTG 1 cut(s) 2789
Msp20I TGGCCA 1 cut(s) 3007
MspA1I CMGCKG 1 cut(s) 782
MspCI CTTAAG 1 cut(s) 2930
MspI CCGG 4 cut(s) 230, 837, 1306, 2040
MspR9I CCNGG 6 cut(s) 75, 230, 838, 1980, 2097, 2801
MunI CAATTG 3 cut(s) 1209, 2898, 3009
Mva1269I GAATGC 3 cut(s) 97, 1629, 1862
MvaI CCWGG 4 cut(s) 75, 1980, 2097, 2801
MvnI CGCG 1 cut(s) 593
MwoI GCNNNNNNNGC 6 cut(s) 313, 978, 1854, 1918, 2396, 2510
NarI GGCGCC 1 cut(s) 709
NciI CCSGG 2 cut(s) 230, 838
NcoI CCATGG 2 cut(s) 1329, 2322
NlaIV GGNNCC 6 cut(s) 72, 234, 421, 710, 2278, 2675
NmuCI GTSAC 5 cut(s) 865, 928, 1249, 2263, 2749
NsiI ATGCAT 3 cut(s) 24, 1859, 2984
NspI RCATGY 3 cut(s) 26, 925, 2110
NspV TTCGAA 2 cut(s) 729, 1655
OliI CACNNNNGTG 1 cut(s) 2789
PaeI GCATGC 2 cut(s) 26, 925
PceI AGGCCT 2 cut(s) 1516, 2095
PciSI GCTCTTC 1 cut(s) 1613
PctI GAATGC 3 cut(s) 97, 1629, 1862
PdmI GAANNNNTTC 4 cut(s) 296, 878, 2846, 3097
PfeI GAWTC 8 cut(s) 249, 369, 453, 824, 874, 1418, 1526, 2329
PflMI CCANNNNNTGG 1 cut(s) 785
PleI GAGTC 1 cut(s) 1246
PluTI GGCGCC 1 cut(s) 712
PpsI GAGTC 1 cut(s) 1246
PpuMI RGGWCCY 1 cut(s) 71
PshBI ATTAAT 1 cut(s) 243
Psp124BI GAGCTC 3 cut(s) 309, 2360, 2581
Psp5II RGGWCCY 1 cut(s) 71
Psp6I CCWGG 4 cut(s) 73, 1978, 2095, 2799
PspGI CCWGG 4 cut(s) 73, 1978, 2095, 2799
PspN4I GGNNCC 6 cut(s) 72, 234, 421, 710, 2278, 2675
PspPI GGNCC 3 cut(s) 71, 1303, 1957
PspPPI RGGWCCY 1 cut(s) 71
PsuI RGATCY 3 cut(s) 1334, 1539, 1966
PvuII CAGCTG 1 cut(s) 782
RsaI GTAC 8 cut(s) 1139, 1354, 1511, 1584, 1713, 1753, 2429, 2696
RsaNI GTAC 8 cut(s) 1138, 1353, 1510, 1583, 1712, 1752, 2428, 2695
RseI CAYNNNNRTG 1 cut(s) 2789
SacI GAGCTC 3 cut(s) 309, 2360, 2581
SapI GCTCTTC 1 cut(s) 1613
SaqAI TTAA 8 cut(s) 243, 1650, 1742, 1782, 1962, 2297, 2528, 2931
Sau96I GGNCC 3 cut(s) 71, 1303, 1957
SchI GAGTC 1 cut(s) 1246
ScrFI CCNGG 6 cut(s) 75, 230, 838, 1980, 2097, 2801
SduI GDGCHC 4 cut(s) 68, 309, 2360, 2581
SfaNI GCATC 8 cut(s) 87, 346, 347, 373, 1756, 1844, 1866, 2275
SfcI CTRYAG 3 cut(s) 118, 631, 1624
SfoI GGCGCC 1 cut(s) 710
SfuI TTCGAA 2 cut(s) 729, 1655
SinI GGWCC 2 cut(s) 71, 1303
SmiMI CAYNNNNRTG 1 cut(s) 2789
SmlI CTYRAG 2 cut(s) 2685, 2930
SmoI CTYRAG 2 cut(s) 2685, 2930
SphI GCATGC 2 cut(s) 26, 925
SseBI AGGCCT 2 cut(s) 1516, 2095
SsiI CCGC 3 cut(s) 440, 593, 618
SspDI GGCGCC 1 cut(s) 708
SspI AATATT 1 cut(s) 726
SspMI CTAG 6 cut(s) 126, 797, 1019, 1518, 2831, 3020
SstI GAGCTC 3 cut(s) 309, 2360, 2581
StuI AGGCCT 2 cut(s) 1516, 2095
StyD4I CCNGG 6 cut(s) 73, 228, 836, 1978, 2095, 2799
StyI CCWWGG 2 cut(s) 1329, 2322
TaaI ACNGT 5 cut(s) 648, 2404, 2467, 2694, 2707
TaiI ACGT 2 cut(s) 1018, 2028
TaqI TCGA 7 cut(s) 219, 662, 729, 1037, 1592, 1641, 1655
TatI WGTACW 6 cut(s) 1137, 1509, 1582, 1711, 1751, 2427
TfiI GAWTC 8 cut(s) 249, 369, 453, 824, 874, 1418, 1526, 2329
Tru1I TTAA 8 cut(s) 243, 1650, 1742, 1782, 1962, 2297, 2528, 2931
Tru9I TTAA 8 cut(s) 243, 1650, 1742, 1782, 1962, 2297, 2528, 2931
TseFI GTSAC 5 cut(s) 865, 928, 1249, 2263, 2749
Tsp45I GTSAC 5 cut(s) 865, 928, 1249, 2263, 2749
TspGWI ACGGA 3 cut(s) 1140, 2176, 2196
Van91I CCANNNNNTGG 1 cut(s) 785
Vha464I CTTAAG 1 cut(s) 2930
VpaK11BI GGWCC 2 cut(s) 71, 1303
VspI ATTAAT 1 cut(s) 243
XapI RAATTY 4 cut(s) 296, 2135, 2181, 2936
XbaI TCTAGA 3 cut(s) 125, 796, 1018
XceI RCATGY 3 cut(s) 26, 925, 2110
XmiI GTMKAC 2 cut(s) 11, 1237
XmnI GAANNNNTTC 4 cut(s) 296, 878, 2846, 3097
XspI CTAG 6 cut(s) 126, 797, 1019, 1518, 2831, 3020
Zsp2I ATGCAT 3 cut(s) 24, 1859, 2984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.