Prupe.1G023100_v2.0.a1

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
1592241 .. 1595300
3060 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G023100.1

Sequence Viewer

Length: 3060 bp
ATGTCTAGCATTTGCAATGCAAAATTGAATTCCATTGACGTTCTACTTGAAGGGGAAAACACACTTAGCACAGCCAGAAAGAGGTGGCATAAGGCTTTTGCTGCAATCTTTTTTTGCAGGGCCATGCTCTCTCTGGTCAAGAAGTCAGAAGCTGAGAAAAAAAGTACCAAGATTTCATACTCTCCTGTTCACACCACTTCCCATTTTCAGCTGAAAAATGGGTTCAAAATTGATAGCAAATGCCTCACTGAACTCATGAAGGAGAAAAATCTACACCTACTTCGGGAGCTTGAAGGCATCGATGGCATTGCGTCTGCTCTTCAAACCGACATTGAGCGTGGCGTCCACGACGACGGTGACAACATTGCCCTCCGACATAAAGCATTCGGTTCAAACACTTATAAGAAGCCACCTTCGAAAAGCCTTTTCCATTTTATGTGGCAAGCTTCTAAGGATCTTACCATTGTCATCCTTTTAGGCTGCGCTGCACTCTCACTTGGCTTTGGCATTAAGCAGCAAGGACTAAAAGAAGGATGGTATGATGGTGGAAGCATCTTTGTTGCTGTTTTTCTTATTGTTGCTATATCTGCCTTTAGTGACTACAGGCAGAGCAAACAATTCGACAAGCTGTCGAAAGCTAGTGAGGATATCCCGATTGATGTTTTGAGAGGCGGGCGAAGGCAAAAGATTTTGAACTTCGACATAGTAGTTGGAGATGTTGTTTTCTTGAAGATTGGTGATCAAGTTCCTGCTGATGGATTGTTCTTATATGGACATTCGTTGCGCGTAGACGAATCAAGCATGACAGGGGAAAGCGACCATGTGGAAGTCGATTGCAGCCACAATCCATTCTTGTTTTCTGGAACCAAGGTGGTTGATGGCTATGGCCAAATGCTTGTCACTTCAGTTGGCATGAACTCAACATGGGGCCAAATGATGAGCTTGATTAACCATGACACCAGTGATCAACAGACGCCTTTACAAGAACGGCTCAGCAAACTAACCCCATTGATGGCTAAGATTGGTTTGGCAGTTGCATTCATGGTCTTTGTGGTCTTATTAGCTCGTTACTTCACTGGAAACACAAAGAAGGAGAACGAAATTGGTAAGTTCGATGGCAGCAAGACAAAGATTGATGATGTGGTGAATGCTGTGGTGGACATAATTGCAATTGCAGTTATTGTTGTTGTGATTGCAATTCCAGAAGGCTTCCCATTGGCTGTCACTCTAACTCTTGCATATTCGATGAAGAAGATGATGGCAGAGCAGGCGTTGGTGAGGAGGCTCTCTGCTTGTGAGACTATGGGCTGTGCCACCACCATTTGTACAGACAAAACCGGCACGCTGACACTCAACCAGATGAAAGTTACAAAGTTTTGGCTTGGCCAAAAATCTGTGGAAGATGGTGCTGCTTATTCATCAATTCCTGATTGTCTTCTTGATTTAATCCTAGAAGGAGTGGCTTTTAACACCACGGGCAGTGTTTACAGGCCTACTTCAGCATCCGAATTTGAGTTTACAGGCAGTCCTACTGAAAAAGCCATTCTTTCATGGGCTGCTCTGGAGCTGAACATGGACATGGAGGGATTGACAAAGAAATGTATCATTCAACATGTTGAAGCCTTCAATTCACAGAAGAAAAGAAGCGGGGTTTTGATGAAACGGAAGGCAGACAATACCACCCATGTGCATTGGAAAGGAGCTGCAGAGATGATATTAGAAATGTGCTCGAGTTACTACGATGCTTCTGGTATTACACAAGATCTGACTGATGATGAAAGGATGAAGTTTGAGCAAACTATTCAAGGGATGGCAGCAAGCAGTCTCCGATGCATTGCTTTTGCACACGAACAAATTCAAGATTACAAGCACTGTGATGAAAAAATACACGAAAAGCTCGAAGACAGCGGCTTGATCTTATTAGGACTGGTTGGTCTAAAGGACCCATGTAGGCCAGGAGTGAGGGAAGCAGTAGAAGCTTGCCAGTTCGCCGGGGTGCAGGTGAAATTGATCACTGGTGACAATGTTTTCACTGCTAAAGCTATAGCTACTGAGTGTGGGATACTCAGGGCAGACCAGGACATGGTCAGGGAAGCAGTGGTAGAAGGTGTGGAATTTCGGAACTACACACCAGAGCAGAGAATGCAGAAGGTTGATGAGATTTGTGTGATGGCAAGGTCTTCACCATTTGATAAACTTCTGATGGTGCAATGCTTGAAACAGAAAGGCCATGTAGTTGCTGTTACTGGCGATGGCACCAATGATGCCCCAGCACTGAAAGAAGCCGATATAGGACTCTCAATGGGGATTCAGGGCACTGAAGTGGCAAAGGAAAGTTCAGACATTGTCATTCTGGATGACAACTTTGCTACTTTGGTCACTGTTTTGAGGTGGGGAAGGGGTGTTTATGCCAACATCCAGAAATTTGTTCAATTCCAGCTCACAATAAATGTTGCTACTCTTGTGATCAACTTTGTGGCAGCTGCCTCAGCTGGTGAAGTACCTTTGACAGCAGTCCAGTTGCTGTGGGTGAATCTGATCATGGACACAATGGCTGCTCTGGCTCTTGCCACAGATAAGCCCACCAAAGAGCTCATGGAAAGGCCACCTGTTGGGCGGACAGAGCCCGTGATCACCTGCATCATGTGGAGGAACATTTTATCTCAAGCTTTGTTCCAGATAGCTGTCCTCTTGATCTTGCAGTTCAGGGGCAGATCAATCTTTGGTGTTAATGAGAGGGTAAACAACACCTTGATCTTCAATACTTTTGTCTTCTGCCAAGTCTTCAATGAATTCAACTCAAGGAACATTGAGAAGAATAATGTCTTCAAAGGGAGTCAAAGGAACAAGCTGTTTTGGGTCATCATTGCAATAACCATTGCAGTTCAGGTGGTTATGGTGGAACTTCTGGAGAGGTTTGCAGATACAGAGAGGCTAAGTTGGGGCCAATGGGGGGCATGCATTGGAATTGCAGCCATATCTTGGCCAATCAGTTGGGTTTTCAAGTGCATACCAGTTCCTGCTAAGCCAATATTCAGCTATCTAAAGAGGGATAAGTGA

Protein Analysis

1020

Amino Acids

112.83

Weight (kDa)

6.68

Isoelectric Point (pI)

31.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 402
AarI CACCTGC 2 cut(s) 1990, 2645
AasI GACNNNNNNGTC 1 cut(s) 1932
Acc36I ACCTGC 2 cut(s) 1990, 2645
AccB1I GGYRCC 1 cut(s) 2255
AccB7I CCANNNNNTGG 3 cut(s) 2083, 2612, 2982
AccI GTMKAC 1 cut(s) 789
AccII CGCG 1 cut(s) 786
AciI CCGC 4 cut(s) 672, 1647, 1908, 2617
AclWI GGATC 1 cut(s) 462
AcoI YGGCCR 3 cut(s) 886, 1384, 2984
AcsI RAATTY 6 cut(s) 28, 1508, 1854, 2114, 2423, 2792
AcuI CTGAAG 3 cut(s) 888, 1482, 2340
AcyI GRCGYC 2 cut(s) 342, 974
AfaI GTAC 3 cut(s) 166, 1327, 2502
AfiI CCNNNNNNNGG 8 cut(s) 81, 283, 755, 1012, 2083, 2612, 2953, 2982
AflIII ACRYGT 1 cut(s) 1612
AhdI GACNNNNNGTC 1 cut(s) 628
AjnI CCWGG 2 cut(s) 1954, 2076
AleI CACNNNNGTG 2 cut(s) 1685, 2321
Alw21I GWGCWC 2 cut(s) 1730, 2595
Alw26I GTCTC 2 cut(s) 1292, 1829
AlwI GGATC 1 cut(s) 462
AlwNI CAGNNNCTG 3 cut(s) 152, 2524, 3020
Ama87I CYCGRG 1 cut(s) 1729
ApoI RAATTY 6 cut(s) 28, 1508, 1854, 2114, 2423, 2792
Asp700I GAANNNNTTC 1 cut(s) 1854
AspLEI GCGC 2 cut(s) 485, 786
AspS9I GGNCC 4 cut(s) 120, 928, 1942, 2944
AsuC2I CCSGG 1 cut(s) 1993
AsuII TTCGAA 1 cut(s) 416
AvaI CYCGRG 1 cut(s) 1729
AvaII GGWCC 1 cut(s) 1942
BaeGI GKGCMC 1 cut(s) 2318
BalI TGGCCA 3 cut(s) 888, 1386, 2986
BanI GGYRCC 1 cut(s) 2255
BanII GRGCYC 2 cut(s) 2595, 2628
BbsI GAAGAC 6 cut(s) 1427, 1908, 2172, 2764, 2776, 2818
Bbv12I GWGCWC 2 cut(s) 1730, 2595
BbvCI CCTCAGC 1 cut(s) 2488
BceAI ACGGC 1 cut(s) 1004
BcgI CGANNNNNNTGC 4 cut(s) 290, 324, 601, 635
BciT130I CCWGG 2 cut(s) 1956, 2078
BciVI GTATCC 1 cut(s) 2055
BclI TGATCA 6 cut(s) 739, 964, 2010, 2466, 2538, 2631
BcnI CCSGG 1 cut(s) 1993
BcoDI GTCTC 2 cut(s) 1292, 1829
BfaI CTAG 3 cut(s) 6, 639, 1451
BfmI CTRYAG 3 cut(s) 601, 1704, 2043
BfuAI ACCTGC 2 cut(s) 1990, 2645
BfuI GTATCC 1 cut(s) 2055
BglII AGATCT 1 cut(s) 1762
BlpI GCTNAGC 2 cut(s) 992, 3024
Bme1390I CCNGG 3 cut(s) 1956, 1993, 2078
Bme18I GGWCC 1 cut(s) 1942
BmeRI GACNNNNNGTC 1 cut(s) 628
BmeT110I CYCGRG 1 cut(s) 1729
BmgT120I GGNCC 4 cut(s) 120, 928, 1942, 2944
BmiI GGNNCC 5 cut(s) 865, 929, 1944, 2257, 2945
BmrFI CCNGG 3 cut(s) 1956, 1993, 2078
BmsI GCATC 7 cut(s) 306, 561, 1511, 1732, 1820, 2254, 2649
BoxI GACNNNNGTC 1 cut(s) 2513
BpiI GAAGAC 6 cut(s) 1427, 1908, 2172, 2764, 2776, 2818
BpmI CTGGAG 2 cut(s) 1583, 2930
Bpu10I CCTNAGC 1 cut(s) 2488
Bpu1102I GCTNAGC 2 cut(s) 992, 3024
Bpu14I TTCGAA 1 cut(s) 416
BpuEI CTTGAG 2 cut(s) 2649, 2785
BpuMI CCSGG 1 cut(s) 1993
Bsa29I ATCGAT 1 cut(s) 300
BsaHI GRCGYC 2 cut(s) 342, 974
BsaJI CCNNGG 3 cut(s) 867, 1473, 1992
BsaXI ACNNNNNCTCC 2 cut(s) 705, 735
Bsc4I CCNNNNNNNGG 8 cut(s) 81, 283, 755, 1012, 2083, 2612, 2953, 2982
Bse118I RCCGGY 1 cut(s) 1337
Bse1I ACTGG 8 cut(s) 960, 1081, 1932, 1984, 2020, 2251, 2518, 3014
Bse3DI GCAATG 7 cut(s) 22, 306, 363, 1833, 2216, 2865, 2877
BseBI CCWGG 2 cut(s) 1956, 2078
BseCI ATCGAT 1 cut(s) 300
BseDI CCNNGG 3 cut(s) 867, 1473, 1992
BseGI GGATG 7 cut(s) 468, 539, 1502, 1788, 1815, 2362, 2415
BseLI CCNNNNNNNGG 8 cut(s) 81, 283, 755, 1012, 2083, 2612, 2953, 2982
BseMI GCAATG 7 cut(s) 22, 306, 363, 1833, 2216, 2865, 2877
BseMII CTCAG 5 cut(s) 144, 1006, 2043, 2080, 2502
BseNI ACTGG 8 cut(s) 960, 1081, 1932, 1984, 2020, 2251, 2518, 3014
BseRI GAGGAG 1 cut(s) 1294
BseSI GKGCMC 1 cut(s) 2318
BseYI CCCAGC 1 cut(s) 2269
BsgI GTGCAG 2 cut(s) 471, 2018
Bsh1236I CGCG 1 cut(s) 786
BshNI GGYRCC 1 cut(s) 2255
BshVI ATCGAT 1 cut(s) 300
BsiHKAI GWGCWC 2 cut(s) 1730, 2595
BsiHKCI CYCGRG 1 cut(s) 1729
BsiSI CCGG 2 cut(s) 1338, 1992
BslI CCNNNNNNNGG 8 cut(s) 81, 283, 755, 1012, 2083, 2612, 2953, 2982
BsmAI GTCTC 2 cut(s) 1292, 1829
BsmI GAATGC 4 cut(s) 383, 1037, 1153, 2148
BsoBI CYCGRG 1 cut(s) 1729
Bsp119I TTCGAA 1 cut(s) 416
Bsp1286I GDGCHC 4 cut(s) 1730, 2318, 2595, 2628
Bsp1407I TGTACA 1 cut(s) 1325
Bsp1720I GCTNAGC 2 cut(s) 992, 3024
BspACI CCGC 4 cut(s) 672, 1647, 1908, 2617
BspCNI CTCAG 5 cut(s) 145, 1005, 2044, 2079, 2501
BspDI ATCGAT 1 cut(s) 300
BspFNI CGCG 1 cut(s) 786
BspHI TCATGA 1 cut(s) 255
BspLI GGNNCC 5 cut(s) 865, 929, 1944, 2257, 2945
BspMAI CTGCAG 1 cut(s) 1708
BspMI ACCTGC 2 cut(s) 1990, 2645
BspPI GGATC 1 cut(s) 462
BspQI GCTCTTC 1 cut(s) 324
BspT104I TTCGAA 1 cut(s) 416
BspT107I GGYRCC 1 cut(s) 2255
BsrDI GCAATG 7 cut(s) 22, 306, 363, 1833, 2216, 2865, 2877
BsrFI RCCGGY 1 cut(s) 1337
BsrGI TGTACA 1 cut(s) 1325
BsrI ACTGG 8 cut(s) 960, 1081, 1932, 1984, 2020, 2251, 2518, 3014
BssAI RCCGGY 1 cut(s) 1337
BssECI CCNNGG 3 cut(s) 867, 1473, 1992
BssNI GRCGYC 2 cut(s) 342, 974
BssT1I CCWWGG 1 cut(s) 867
Bst2UI CCWGG 2 cut(s) 1956, 2078
Bst4CI ACNGT 3 cut(s) 356, 1874, 2383
Bst6I CTCTTC 1 cut(s) 324
BstACI GRCGYC 2 cut(s) 342, 974
BstAPI GCANNNNNTGC 1 cut(s) 2143
BstAUI TGTACA 1 cut(s) 1325
BstBI TTCGAA 1 cut(s) 416
BstC8I GCNNGC 7 cut(s) 444, 674, 1269, 1343, 1819, 1981, 2959
BstDSI CCRYGG 1 cut(s) 1473
BstF5I GGATG 7 cut(s) 468, 539, 1502, 1788, 1815, 2362, 2415
BstFNI CGCG 1 cut(s) 786
BstHHI GCGC 2 cut(s) 485, 786
BstMAI GTCTC 2 cut(s) 1292, 1829
BstMWI GCNNNNNNNGC 9 cut(s) 101, 303, 587, 1268, 1976, 2143, 2489, 2561, 2623
BstNI CCWGG 2 cut(s) 1956, 2078
BstNSI RCATGY 2 cut(s) 1616, 2961
BstPAI GACNNNNGTC 1 cut(s) 2513
BstSCI CCNGG 3 cut(s) 1954, 1991, 2076
BstSFI CTRYAG 3 cut(s) 601, 1704, 2043
BstSLI GKGCMC 1 cut(s) 2318
BstUI CGCG 1 cut(s) 786
BstV2I GAAGAC 6 cut(s) 1427, 1908, 2172, 2764, 2776, 2818
BstX2I RGATCY 2 cut(s) 454, 1762
BstXI CCANNNNNNTGG 1 cut(s) 2994
BstYI RGATCY 2 cut(s) 454, 1762
Bsu15I ATCGAT 1 cut(s) 300
BsuI GTATCC 1 cut(s) 2055
BsuTUI ATCGAT 1 cut(s) 300
BtgI CCRYGG 1 cut(s) 1473
BtgZI GCGATG 1 cut(s) 2265
BtsCI GGATG 7 cut(s) 468, 539, 1502, 1788, 1815, 2362, 2415
BtsI GCAGTG 3 cut(s) 1486, 2031, 2103
BveI ACCTGC 2 cut(s) 1990, 2645
Cac8I GCNNGC 7 cut(s) 444, 674, 1269, 1343, 1819, 1981, 2959
CaiI CAGNNNCTG 3 cut(s) 152, 2524, 3020
CciI TCATGA 1 cut(s) 255
CfoI GCGC 2 cut(s) 485, 786
Cfr10I RCCGGY 1 cut(s) 1337
Cfr13I GGNCC 4 cut(s) 120, 928, 1942, 2944
ClaI ATCGAT 1 cut(s) 300
CseI GACGC 3 cut(s) 300, 331, 982
Csp6I GTAC 3 cut(s) 165, 1326, 2501
CviQI GTAC 3 cut(s) 165, 1326, 2501
DrdI GACNNNNNNGTC 1 cut(s) 1932
DriI GACNNNNNGTC 1 cut(s) 628
DseDI GACNNNNNNGTC 1 cut(s) 1932
EaeI YGGCCR 3 cut(s) 886, 1384, 2984
Eam1104I CTCTTC 1 cut(s) 324
Eam1105I GACNNNNNGTC 1 cut(s) 628
EarI CTCTTC 1 cut(s) 324
EciI GGCGGA 1 cut(s) 2632
Ecl136II GAGCTC 1 cut(s) 2593
Eco130I CCWWGG 1 cut(s) 867
Eco147I AGGCCT 1 cut(s) 1492
Eco24I GRGCYC 2 cut(s) 2595, 2628
Eco32I GATATC 1 cut(s) 649
Eco47I GGWCC 1 cut(s) 1942
Eco53kI GAGCTC 1 cut(s) 2593
Eco57I CTGAAG 3 cut(s) 888, 1482, 2340
Eco88I CYCGRG 1 cut(s) 1729
EcoICRI GAGCTC 1 cut(s) 2593
EcoO109I RGGNCCY 1 cut(s) 1942
EcoRI GAATTC 2 cut(s) 28, 2792
EcoRII CCWGG 2 cut(s) 1954, 2076
EcoRV GATATC 1 cut(s) 649
EcoT14I CCWWGG 1 cut(s) 867
EcoT22I ATGCAT 2 cut(s) 1835, 2963
EcoT38I GRGCYC 2 cut(s) 2595, 2628
ErhI CCWWGG 1 cut(s) 867
FalI AAGNNNNNCTT 2 cut(s) 1530, 1562
FauI CCCGC 2 cut(s) 665, 1640
FbaI TGATCA 6 cut(s) 739, 964, 2010, 2466, 2538, 2631
FblI GTMKAC 1 cut(s) 789
FokI GGATG 7 cut(s) 455, 546, 1489, 1795, 1822, 2369, 2402
FriOI GRGCYC 2 cut(s) 2595, 2628
FspBI CTAG 3 cut(s) 6, 639, 1451
GlaI GCGC 2 cut(s) 484, 785
GsaI CCCAGC 1 cut(s) 2273
GsuI CTGGAG 2 cut(s) 1583, 2930
HapII CCGG 2 cut(s) 1338, 1992
HgaI GACGC 3 cut(s) 300, 331, 982
HhaI GCGC 2 cut(s) 485, 786
Hin1I GRCGYC 2 cut(s) 342, 974
Hin6I GCGC 2 cut(s) 483, 784
HinP1I GCGC 2 cut(s) 483, 784
HindIII AAGCTT 3 cut(s) 444, 1977, 2667
HinfI GANTC 5 cut(s) 794, 2295, 2308, 2533, 2836
HpaII CCGG 2 cut(s) 1338, 1992
Hpy166II GTNNAC 7 cut(s) 190, 346, 790, 1159, 1486, 1518, 2743
Hpy188I TCNGA 9 cut(s) 148, 374, 1507, 1767, 1829, 2121, 2202, 2341, 2538
Hpy8I GTNNAC 7 cut(s) 190, 346, 790, 1159, 1486, 1518, 2743
Hpy99I CGWCG 2 cut(s) 353, 356
HpyCH4III ACNGT 3 cut(s) 356, 1874, 2383
HpyCH4IV ACGT 1 cut(s) 39
HpyF10VI GCNNNNNNNGC 9 cut(s) 101, 303, 587, 1268, 1976, 2143, 2489, 2561, 2623
HpySE526I ACGT 1 cut(s) 39
Hsp92I GRCGYC 2 cut(s) 342, 974
HspAI GCGC 2 cut(s) 483, 784
Ksp22I TGATCA 6 cut(s) 739, 964, 2010, 2466, 2538, 2631
LguI GCTCTTC 1 cut(s) 324
LmnI GCTCC 3 cut(s) 286, 1564, 1700
LweI GCATC 7 cut(s) 306, 561, 1511, 1732, 1820, 2254, 2649
MaeI CTAG 3 cut(s) 6, 639, 1451
MaeII ACGT 1 cut(s) 39
MfeI CAATTG 1 cut(s) 1170
MflI RGATCY 2 cut(s) 454, 1762
MhlI GDGCHC 4 cut(s) 1730, 2318, 2595, 2628
MlsI TGGCCA 3 cut(s) 888, 1386, 2986
MluNI TGGCCA 3 cut(s) 888, 1386, 2986
MlyI GAGTC 2 cut(s) 2289, 2845
MmeI TCCRAC 2 cut(s) 397, 691
Mox20I TGGCCA 3 cut(s) 888, 1386, 2986
Mph1103I ATGCAT 2 cut(s) 1835, 2963
MroXI GAANNNNTTC 1 cut(s) 1854
MscI TGGCCA 3 cut(s) 888, 1386, 2986
MseI TTAA 5 cut(s) 510, 948, 1445, 1467, 2730
MslI CAYNNNNRTG 4 cut(s) 1577, 1685, 1875, 2321
Msp20I TGGCCA 3 cut(s) 888, 1386, 2986
MspA1I CMGCKG 4 cut(s) 211, 1908, 2483, 2492
MspI CCGG 2 cut(s) 1338, 1992
MspR9I CCNGG 3 cut(s) 1956, 1993, 2078
MunI CAATTG 1 cut(s) 1170
Mva1269I GAATGC 4 cut(s) 383, 1037, 1153, 2148
MvaI CCWGG 2 cut(s) 1956, 2078
MvnI CGCG 1 cut(s) 786
MwoI GCNNNNNNNGC 9 cut(s) 101, 303, 587, 1268, 1976, 2143, 2489, 2561, 2623
NciI CCSGG 1 cut(s) 1993
NlaIV GGNNCC 5 cut(s) 865, 929, 1944, 2257, 2945
NmuCI GTSAC 6 cut(s) 356, 596, 898, 1222, 2018, 2377
NsiI ATGCAT 2 cut(s) 1835, 2963
NspI RCATGY 2 cut(s) 1616, 2961
NspV TTCGAA 1 cut(s) 416
OliI CACNNNNGTG 2 cut(s) 1685, 2321
PaeI GCATGC 1 cut(s) 2961
PaeR7I CTCGAG 1 cut(s) 1729
PagI TCATGA 1 cut(s) 255
PaqCI CACCTGC 2 cut(s) 1990, 2645
PceI AGGCCT 1 cut(s) 1492
PciI ACATGT 1 cut(s) 1612
PciSI GCTCTTC 1 cut(s) 324
PcsI WCGNNNNNNNCGW 1 cut(s) 1896
PctI GAATGC 4 cut(s) 383, 1037, 1153, 2148
PdmI GAANNNNTTC 1 cut(s) 1854
PfeI GAWTC 3 cut(s) 794, 2308, 2533
PflFI GACNNNGTC 2 cut(s) 2084, 2345
PflMI CCANNNNNTGG 3 cut(s) 2083, 2612, 2982
PleI GAGTC 2 cut(s) 2289, 2844
PpsI GAGTC 2 cut(s) 2289, 2844
PpuMI RGGWCCY 1 cut(s) 1942
PscI ACATGT 1 cut(s) 1612
PshAI GACNNNNGTC 1 cut(s) 2513
PsiI TTATAA 1 cut(s) 402
Psp124BI GAGCTC 1 cut(s) 2595
Psp5II RGGWCCY 1 cut(s) 1942
Psp6I CCWGG 2 cut(s) 1954, 2076
PspFI CCCAGC 1 cut(s) 2269
PspGI CCWGG 2 cut(s) 1954, 2076
PspN4I GGNNCC 5 cut(s) 865, 929, 1944, 2257, 2945
PspPI GGNCC 4 cut(s) 120, 928, 1942, 2944
PspPPI RGGWCCY 1 cut(s) 1942
PspXI VCTCGAGB 1 cut(s) 1729
PstI CTGCAG 1 cut(s) 1708
PstNI CAGNNNCTG 3 cut(s) 152, 2524, 3020
PsuI RGATCY 2 cut(s) 454, 1762
PsyI GACNNNGTC 2 cut(s) 2084, 2345
PvuII CAGCTG 3 cut(s) 211, 2483, 2492
RsaI GTAC 3 cut(s) 166, 1327, 2502
RsaNI GTAC 3 cut(s) 165, 1326, 2501
RseI CAYNNNNRTG 4 cut(s) 1577, 1685, 1875, 2321
SacI GAGCTC 1 cut(s) 2595
SapI GCTCTTC 1 cut(s) 324
SaqAI TTAA 5 cut(s) 510, 948, 1445, 1467, 2730
Sau96I GGNCC 4 cut(s) 120, 928, 1942, 2944
SchI GAGTC 2 cut(s) 2289, 2845
ScrFI CCNGG 3 cut(s) 1956, 1993, 2078
SduI GDGCHC 4 cut(s) 1730, 2318, 2595, 2628
SfaNI GCATC 7 cut(s) 306, 561, 1511, 1732, 1820, 2254, 2649
SfcI CTRYAG 3 cut(s) 601, 1704, 2043
Sfr274I CTCGAG 1 cut(s) 1729
SfuI TTCGAA 1 cut(s) 416
SinI GGWCC 1 cut(s) 1942
SlaI CTCGAG 1 cut(s) 1729
SmiMI CAYNNNNRTG 4 cut(s) 1577, 1685, 1875, 2321
SmlI CTYRAG 3 cut(s) 1729, 2664, 2800
SmoI CTYRAG 3 cut(s) 1729, 2664, 2800
SphI GCATGC 1 cut(s) 2961
SseBI AGGCCT 1 cut(s) 1492
SsiI CCGC 4 cut(s) 672, 1647, 1908, 2617
SspI AATATT 1 cut(s) 3033
SspMI CTAG 3 cut(s) 6, 639, 1451
SstI GAGCTC 1 cut(s) 2595
StuI AGGCCT 1 cut(s) 1492
StyD4I CCNGG 3 cut(s) 1954, 1991, 2076
StyI CCWWGG 1 cut(s) 867
TaaI ACNGT 3 cut(s) 356, 1874, 2383
TaiI ACGT 1 cut(s) 42
TatI WGTACW 1 cut(s) 1325
TauI GCSGC 1 cut(s) 1911
TfiI GAWTC 3 cut(s) 794, 2308, 2533
Tru1I TTAA 5 cut(s) 510, 948, 1445, 1467, 2730
Tru9I TTAA 5 cut(s) 510, 948, 1445, 1467, 2730
TseFI GTSAC 6 cut(s) 356, 596, 898, 1222, 2018, 2377
Tsp45I GTSAC 6 cut(s) 356, 596, 898, 1222, 2018, 2377
TspGWI ACGGA 1 cut(s) 1678
Tth111I GACNNNGTC 2 cut(s) 2084, 2345
Van91I CCANNNNNTGG 3 cut(s) 2083, 2612, 2982
VpaK11BI GGWCC 1 cut(s) 1942
XapI RAATTY 6 cut(s) 28, 1508, 1854, 2114, 2423, 2792
XceI RCATGY 2 cut(s) 1616, 2961
XcmI CCANNNNNNNNNTGG 2 cut(s) 130, 2593
XhoI CTCGAG 1 cut(s) 1729
XmiI GTMKAC 1 cut(s) 789
XmnI GAANNNNTTC 1 cut(s) 1854
XspI CTAG 3 cut(s) 6, 639, 1451
Zsp2I ATGCAT 2 cut(s) 1835, 2963
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.