Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000174

Physical Location & Seq

Genomic Coordinates Reverse (-)

1490679 .. 1493570

Gene Structure 2892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g01670.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2892 bp

ATGAGTGGCAGCACTGAAAGTGCAAATTTGAGTCTCGTTGAGCTCAACAAGGGGTTCAAAATTGATAACAAATGCCTCACTCAACTCATGAAGGAGAAGAATCTAAACCTGCTTCAAGACCTTGGAGGGGCTAATGGTGTCGCGTCAGCTCTTGAAGCTGACAATGAGCTTGGAATCCATGATGAAAAGGAAAACATTTCTCGCCGCAAGGAAGCATTTGGCTCAAACACGTATAGCAAACCACCTTCGAAAAGCCTTTTCCATTTCATGTGGCAGGCCTCTAAGGACCTCACCATTGTCATCCTTTTAGGCTGCGCTGCGCTTTCGCTTGGCTTTGGCATCAAGCAAGATGGACTTAAAGAAGGGTGGTATGATGGTGGAAGCATCTTCATTGCTGTTGTTCTCATCGTTGTTATATCTGCCTTTAGTGACTACAGACAGAACAAGCAATTCGAAAAGCTGTCCAAAGCAAGTGATGACATTCCAATCGATGTTTTAAGAGGTGGAAGAAGACAGAAGGTTTCCATCTTTGACATTGTGGTTGGGGATGTTGTGTTTCTGAAGATTGGAGACCAAGTTCCTGCTGATGGATTGTTCTTATATGGACATTCGTTGCGAGTAGACGAATCAAGCATGACTGGAGAGAGTGACCATGTGGAGGTTGATTGCAGCAATAATCCATTCTTGTATTCTGGAACCAAAGTGGCTGATGGATACGGCCGCATGCTTGTGACTTCAGTGGGGATGAACTCAAGTTGGGGCCAAATGATGAGCTTGATCAGCCACGAAAACAACGAGCAAACACCATTGCAAGAAAAGCTCAGTAAGTTCACTCCATTACTTGCTAAGATTGGCTTGGCAGTTGCATTCATGGTCTTCGTGGTGCTGTTAGTTCGTTACTTCACAGGAAACACAAAGAGTGAGAATGGAAGTTTTGGTAAGTTCAAGAGTGGCAAGACGAGGATTGATGATGTGGCCAATGCCTTGTTGGATATGGTAGCAGTTGCTGTCATTATTGTTGTGATTGCAATTCCAGAAGGGTTTCCATTGGCTGTGACTCTAACTCTTGCTTACTCCATGAAGAAAATGATGGCAGATCATGCATTGGTTCGGAGGCTCTCAGCTTGCGAGACTATGGGATGTGCCACTATAATTTGTACAGACAAAACAGGTACTCTCACACTCAACCAGATGAAAGTTGTGAAGTTTTGGATTGGAAAGGAAAGTGTAGGAGATGGTGCTCCTTATTCATCAATTCCTCGTAGTCTACTTGGTTTGATCCGAGAAGGGGTAGCGTTCAACACAACAGGAAGTGTTTACAAGCCTAAATCAGGATCAGGGTTTGAGTTTTCCGGCAGTCCTACTGAAAAAGCCATTCTTTCATGGGCTGCAGTTGAAGTTAACATGGACATCGATGAGTTGAAGAAGAACTGTGCCATTCAACATGTTGAGGCCTTCAATTCACAGAAGAAGCGTAGCGGGGTTTTGGTGAGAAGGAAGGCAGACAATACAATCCATGTGCATTGGAAAGGAGCTGCGGAGATGATAGTAGAAATGTGCTCAAGTTACTATGATGCCTCTGGTGTTACCAATGATCTTGGTGATGATGAAAGGATGCAGTTCAAGAAAATTGTTCAAGGTATGGCAGCAAGCAGTCTTAGATGCATTGCTTTTGCACACAAACAAGTTCAAGACAGCAAGCACAATGATGAAAAAGATAGCATGATGCTGGAAGAGCACAACTTGATCCTAGTAGGCTTGGTGGGTTTAAAAGACCCATGTAGGCCAGGAGTGAGAGAGGCAGTAGAAGCTTGCCAGTTCGCCGGGGTTCAAGTGAAACTGATCACTGGTGATAATGTGTTCACAGCTAAATCCATAGCTACTGAGTGTGGTATACTGAGGCCTAATGACCAAGAAATGATAAGGGAAGCAGTGGTAGAAGGTGAAGAATTTCGAAACTACACACCAGAGGAGAGAATGCAGAGAGTTGATGGAATTCGTGTGATGGCAAGGTCTTCTCCATTTGATAAGCTCCTGATGGTGCAGTGCTTAAAACAGAAAGGGCATGTGGTTGCTGTGACTGGTGATGGCACAAATGATGCGCCAGCGCTGAAGGAGGCCGATATAGGACTCTCGATGGGGATTCAAGGCACCGAAGTGGCAAAGGAAAGTTCAGACATTGTGATCCTAGATGACAACTTTGCTACTGTGGTCACTGTTTTAAGGTGGGGAAGAGGTGTCTATGCCAACATTCAGAAGTTTGTGCAATTCCAGCTCACAATAAATGTTGCCACTCTTGTAGTCAACTTTGTTGCAGCAGCTTCAGCTGGTGAAGTCCCTTTAACAGCAGTCCAGTTGCTGTGGGTGAATCTGATAATGGACACAATGGCTGCTCTGGCTCTTGCCACAGATAAGCCAACCAAAGAGCTCATGGAGAGGCCGCCAGTGCTTCGATCTGAGCCTGTGATCTCATACCTCATGTGGAGGAACGTTTTCGCACAAGCTCTGTTCCAGGTAGCTGTGCTCTTGATCTTGCAATTCAAAGGCGAATCAATCTTTGGTGTTAGTGACAAGGTGAACAACACTATGATCTTCAACGTCTTTGTCTTGTGCCAAGTGTGTAATGAATTCAATGCAAGGAGTGTAGAGAAGAAGAATGTCTTCAAAGGGATTCGAAAGAACAAGTTGTTTTGGGTGATCGTTGGTATAACCATTGTAGTTCAGGTGGTTATGGTGGAGTTTCTGAATAGGTTTGCAGATACAGAGAGGTTAAGTTGGAGTCAATGGGGTGCTTGCTTTGGAATTTCAGTCATATCTTGCCCAATCAGCTGGGTTGTCAAGTTCATACCAGTTCCTGCGAAGCCGATATTCAGTTATCTAAAGAAAGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

964

Amino Acids

105.83

Weight (kDa)

7.16

Isoelectric Point (pI)

28.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	42 - 109	7.4e-11	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	164 - 260	5.6e-21	P-type ATPase actuator domain
Hydrolase	PF00702	384 - 708	1.2e-12	haloacid dehalogenase-like hydrolase
Cation_ATPase	PF13246	426 - 596	6.8e-30	P-type ATPase, cytoplasmic domain N
Cation_ATPase_C	PF00689	779 - 949	1.9e-49	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22910
fragaria_vesca	FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica	MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica	Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis	pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis	RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata	RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora	Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa	Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha	Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana	Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	117
AccB1I	GGYRCC	1 cut(s)	2150
AccI	GTMKAC	3 cut(s)	621, 1267, 1894
AccII	CGCG	1 cut(s)	143
AciI	CCGC	5 cut(s)	205, 721, 1479, 1538, 2441
AclI	AACGTT	1 cut(s)	2490
AclWI	GGATC	4 cut(s)	1273, 1342, 1741, 2179
AcoI	YGGCCR	2 cut(s)	718, 975
AcsI	RAATTY	5 cut(s)	25, 1949, 1995, 2627, 2802
AcuI	CTGAAG	4 cut(s)	581, 720, 2132, 2307
AfaI	GTAC	2 cut(s)	1159, 1174
AfeI	AGCGCT	1 cut(s)	2109
AfiI	CCNNNNNNNGG	5 cut(s)	127, 587, 658, 1288, 1331
AflIII	ACRYGT	2 cut(s)	228, 1444
AjnI	CCWGG	2 cut(s)	1786, 2511
AjuI	GAANNNNNNNTTGG	2 cut(s)	2541, 2573
AleI	CACNNNNGTG	1 cut(s)	2156
AloI	GAACNNNNNNTCC	2 cut(s)	561, 593
Alw21I	GWGCWC	6 cut(s)	45, 1243, 1562, 1740, 2430, 2526
Alw26I	GTCTC	3 cut(s)	38, 564, 1124
AlwI	GGATC	4 cut(s)	1273, 1342, 1741, 2179
AlwNI	CAGNNNCTG	3 cut(s)	1007, 2359, 2855
Aor51HI	AGCGCT	1 cut(s)	2109
AoxI	GGCC	9 cut(s)	276, 718, 760, 975, 1452, 1784, 1901, 2118, 2438
ApoI	RAATTY	5 cut(s)	25, 1949, 1995, 2627, 2802
Asp700I	GAANNNNTTC	4 cut(s)	1041, 1950, 2492, 2660
AspLEI	GCGC	4 cut(s)	317, 322, 2104, 2110
AspS9I	GGNCC	2 cut(s)	286, 760
AsuC2I	CCSGG	1 cut(s)	1825
AsuII	TTCGAA	4 cut(s)	248, 453, 1954, 2674
AvaII	GGWCC	1 cut(s)	286
BalI	TGGCCA	1 cut(s)	977
BanI	GGYRCC	1 cut(s)	2150
BanII	GRGCYC	2 cut(s)	45, 2430
BbsI	GAAGAC	4 cut(s)	517, 868, 2007, 2653
Bbv12I	GWGCWC	6 cut(s)	45, 1243, 1562, 1740, 2430, 2526
BceAI	ACGGC	1 cut(s)	733
BciT130I	CCWGG	2 cut(s)	1788, 2513
BciVI	GTATCC	1 cut(s)	707
BclI	TGATCA	2 cut(s)	777, 1842
BcnI	CCSGG	1 cut(s)	1825
BcoDI	GTCTC	3 cut(s)	38, 564, 1124
BfaI	CTAG	2 cut(s)	1751, 2189
BfmI	CTRYAG	2 cut(s)	433, 1389
BfoI	RGCGCY	1 cut(s)	2111
BfuAI	ACCTGC	1 cut(s)	117
BfuI	GTATCC	1 cut(s)	707
Bme1390I	CCNGG	3 cut(s)	1788, 1825, 2513
Bme18I	GGWCC	1 cut(s)	286
BmgT120I	GGNCC	2 cut(s)	286, 760
BmiI	GGNNCC	3 cut(s)	697, 761, 2152
BmrFI	CCNGG	3 cut(s)	1788, 1825, 2513
BmsI	GCATC	7 cut(s)	348, 393, 1564, 1605, 1652, 1716, 2089
BpiI	GAAGAC	4 cut(s)	517, 868, 2007, 2653
BpmI	CTGGAG	1 cut(s)	660
Bpu14I	TTCGAA	4 cut(s)	248, 453, 1954, 2674
BpuEI	CTTGAG	2 cut(s)	736, 1546
BpuMI	CCSGG	1 cut(s)	1825
Bsa29I	ATCGAT	2 cut(s)	489, 1413
BsaAI	YACGTR	1 cut(s)	231
BsaI	GGTCTC	1 cut(s)	564
BsaJI	CCNNGG	2 cut(s)	121, 1824
BsaXI	ACNNNNNCTCC	2 cut(s)	561, 591
Bsc4I	CCNNNNNNNGG	5 cut(s)	127, 587, 658, 1288, 1331
Bse1I	ACTGG	7 cut(s)	643, 1816, 1852, 2086, 2353, 2444, 2849
Bse3DI	GCAATG	3 cut(s)	390, 806, 1665
BseBI	CCWGG	2 cut(s)	1788, 2513
BseCI	ATCGAT	2 cut(s)	489, 1413
BseDI	CCNNGG	2 cut(s)	121, 1824
BseGI	GGATG	5 cut(s)	300, 553, 750, 1145, 1620
BseLI	CCNNNNNNNGG	5 cut(s)	127, 587, 658, 1288, 1331
BseMI	GCAATG	3 cut(s)	390, 806, 1665
BseMII	CTCAG	5 cut(s)	835, 1134, 1875, 1889, 2448
BseNI	ACTGG	7 cut(s)	643, 1816, 1852, 2086, 2353, 2444, 2849
BseRI	GAGGAG	1 cut(s)	1985
BseX3I	CGGCCG	1 cut(s)	718
BseYI	CCCAGC	1 cut(s)	2829
BsgI	GTGCAG	1 cut(s)	2063
Bsh1236I	CGCG	1 cut(s)	143
Bsh1285I	CGRYCG	1 cut(s)	721
BshFI	GGCC	9 cut(s)	278, 720, 762, 977, 1454, 1786, 1903, 2120, 2440
BshNI	GGYRCC	1 cut(s)	2150
BshVI	ATCGAT	2 cut(s)	489, 1413
BsiEI	CGRYCG	1 cut(s)	721
BsiHKAI	GWGCWC	6 cut(s)	45, 1243, 1562, 1740, 2430, 2526
BsiSI	CCGG	2 cut(s)	1353, 1824
BslFI	GGGAC	1 cut(s)	2321
BslI	CCNNNNNNNGG	5 cut(s)	127, 587, 658, 1288, 1331
BsmAI	GTCTC	3 cut(s)	38, 564, 1124
BsmFI	GGGAC	1 cut(s)	2321
BsmI	GAATGC	2 cut(s)	866, 1983
BsnI	GGCC	9 cut(s)	278, 720, 762, 977, 1454, 1786, 1903, 2120, 2440
Bso31I	GGTCTC	1 cut(s)	564
Bsp119I	TTCGAA	4 cut(s)	248, 453, 1954, 2674
Bsp1286I	GDGCHC	6 cut(s)	45, 1243, 1562, 1740, 2430, 2526
Bsp1407I	TGTACA	1 cut(s)	1157
BspACI	CCGC	5 cut(s)	205, 721, 1479, 1538, 2441
BspANI	GGCC	9 cut(s)	278, 720, 762, 977, 1454, 1786, 1903, 2120, 2440
BspCNI	CTCAG	5 cut(s)	834, 1133, 1876, 1890, 2449
BspDI	ATCGAT	2 cut(s)	489, 1413
BspFNI	CGCG	1 cut(s)	143
BspHI	TCATGA	1 cut(s)	87
BspLI	GGNNCC	3 cut(s)	697, 761, 2152
BspMAI	CTGCAG	1 cut(s)	1393
BspMI	ACCTGC	1 cut(s)	117
BspPI	GGATC	4 cut(s)	1273, 1342, 1741, 2179
BspQI	GCTCTTC	1 cut(s)	1728
BspT104I	TTCGAA	4 cut(s)	248, 453, 1954, 2674
BspT107I	GGYRCC	1 cut(s)	2150
BspTNI	GGTCTC	1 cut(s)	564
BsrDI	GCAATG	3 cut(s)	390, 806, 1665
BsrGI	TGTACA	1 cut(s)	1157
BsrI	ACTGG	7 cut(s)	643, 1816, 1852, 2086, 2353, 2444, 2849
BssECI	CCNNGG	2 cut(s)	121, 1824
BssNAI	GTATAC	1 cut(s)	1895
BssT1I	CCWWGG	1 cut(s)	121
Bst1107I	GTATAC	1 cut(s)	1895
Bst2UI	CCWGG	2 cut(s)	1788, 2513
Bst4CI	ACNGT	3 cut(s)	1433, 2209, 2218
Bst6I	CTCTTC	2 cut(s)	1728, 2227
BstAPI	GCANNNNNTGC	1 cut(s)	1100
BstAUI	TGTACA	1 cut(s)	1157
BstBAI	YACGTR	1 cut(s)	231
BstBI	TTCGAA	4 cut(s)	248, 453, 1954, 2674
BstC8I	GCNNGC	8 cut(s)	276, 725, 1126, 1651, 1700, 1813, 2106, 2794
BstDEI	CTNAG	8 cut(s)	282, 821, 846, 1120, 1658, 1884, 1898, 2457
BstENI	CCTNNNNNAGG	1 cut(s)	1329
BstF5I	GGATG	5 cut(s)	300, 553, 750, 1145, 1620
BstFNI	CGCG	1 cut(s)	143
BstH2I	RGCGCY	1 cut(s)	2111
BstHHI	GCGC	4 cut(s)	317, 322, 2104, 2110
BstMAI	GTCTC	3 cut(s)	38, 564, 1124
BstMCI	CGRYCG	1 cut(s)	721
BstNI	CCWGG	2 cut(s)	1788, 2513
BstNSI	RCATGY	3 cut(s)	727, 1448, 2069
BstSCI	CCNGG	3 cut(s)	1786, 1823, 2511
BstSFI	CTRYAG	2 cut(s)	433, 1389
BstUI	CGCG	1 cut(s)	143
BstV2I	GAAGAC	4 cut(s)	517, 868, 2007, 2653
BstXI	CCANNNNNNTGG	1 cut(s)	2829
BstZ17I	GTATAC	1 cut(s)	1895
BstZI	CGGCCG	1 cut(s)	718
Bsu15I	ATCGAT	2 cut(s)	489, 1413
BsuI	GTATCC	1 cut(s)	707
BsuRI	GGCC	9 cut(s)	278, 720, 762, 977, 1454, 1786, 1903, 2120, 2440
BsuTUI	ATCGAT	2 cut(s)	489, 1413
BtsCI	GGATG	5 cut(s)	300, 553, 750, 1145, 1620
BtsI	GCAGTG	2 cut(s)	1938, 2051
BtsIMutI	CAGTG	7 cut(s)	12, 744, 1845, 1938, 2051, 2214, 2451
BveI	ACCTGC	1 cut(s)	117
Cac8I	GCNNGC	8 cut(s)	276, 725, 1126, 1651, 1700, 1813, 2106, 2794
CaiI	CAGNNNCTG	3 cut(s)	1007, 2359, 2855
CciI	TCATGA	1 cut(s)	87
CfoI	GCGC	4 cut(s)	317, 322, 2104, 2110
Cfr13I	GGNCC	2 cut(s)	286, 760
ClaI	ATCGAT	2 cut(s)	489, 1413
CseI	GACGC	1 cut(s)	132
Csp6I	GTAC	2 cut(s)	1158, 1173
CviQI	GTAC	2 cut(s)	1158, 1173
DdeI	CTNAG	8 cut(s)	282, 821, 846, 1120, 1658, 1884, 1898, 2457
DraI	TTTAAA	1 cut(s)	1770
EaeI	YGGCCR	2 cut(s)	718, 975
EagI	CGGCCG	1 cut(s)	718
Eam1104I	CTCTTC	2 cut(s)	1728, 2227
EarI	CTCTTC	2 cut(s)	1728, 2227
Ecl136II	GAGCTC	2 cut(s)	43, 2428
EclXI	CGGCCG	1 cut(s)	718
Eco130I	CCWWGG	1 cut(s)	121
Eco147I	AGGCCT	3 cut(s)	278, 1454, 1903
Eco24I	GRGCYC	2 cut(s)	45, 2430
Eco31I	GGTCTC	1 cut(s)	564
Eco47I	GGWCC	1 cut(s)	286
Eco47III	AGCGCT	1 cut(s)	2109
Eco52I	CGGCCG	1 cut(s)	718
Eco53kI	GAGCTC	2 cut(s)	43, 2428
Eco57I	CTGAAG	4 cut(s)	581, 720, 2132, 2307
EcoICRI	GAGCTC	2 cut(s)	43, 2428
EcoNI	CCTNNNNNAGG	1 cut(s)	1329
EcoO109I	RGGNCCY	1 cut(s)	286
EcoRI	GAATTC	2 cut(s)	1995, 2627
EcoRII	CCWGG	2 cut(s)	1786, 2511
EcoT14I	CCWWGG	1 cut(s)	121
EcoT22I	ATGCAT	2 cut(s)	1105, 1667
EcoT38I	GRGCYC	2 cut(s)	45, 2430
ErhI	CCWWGG	1 cut(s)	121
FalI	AAGNNNNNCTT	8 cut(s)	339, 371, 839, 871, 1362, 1394, 2645, 2677
FaqI	GGGAC	1 cut(s)	2321
FauI	CCCGC	1 cut(s)	1472
FbaI	TGATCA	2 cut(s)	777, 1842
FblI	GTMKAC	3 cut(s)	621, 1267, 1894
FokI	GGATG	5 cut(s)	287, 560, 757, 1152, 1627
FriOI	GRGCYC	2 cut(s)	45, 2430
FspBI	CTAG	2 cut(s)	1751, 2189
GlaI	GCGC	4 cut(s)	316, 321, 2103, 2109
GsaI	CCCAGC	1 cut(s)	2833
GsuI	CTGGAG	1 cut(s)	660
HaeII	RGCGCY	1 cut(s)	2111
HaeIII	GGCC	9 cut(s)	278, 720, 762, 977, 1454, 1786, 1903, 2120, 2440
HapII	CCGG	2 cut(s)	1353, 1824
HgaI	GACGC	1 cut(s)	132
HhaI	GCGC	4 cut(s)	317, 322, 2104, 2110
Hin6I	GCGC	4 cut(s)	315, 320, 2102, 2108
HinP1I	GCGC	4 cut(s)	315, 320, 2102, 2108
HincII	GTYRAC	2 cut(s)	1402, 2305
HindII	GTYRAC	2 cut(s)	1402, 2305
HindIII	AAGCTT	1 cut(s)	1809
HpaI	GTTAAC	1 cut(s)	1402
HpaII	CCGG	2 cut(s)	1353, 1824
Hpy166II	GTNNAC	9 cut(s)	622, 831, 1268, 1318, 1402, 1863, 1895, 2305, 2578
Hpy188I	TCNGA	8 cut(s)	561, 1113, 1283, 2176, 2256, 2373, 2458, 2745
Hpy8I	GTNNAC	9 cut(s)	622, 831, 1268, 1318, 1402, 1863, 1895, 2305, 2578
HpyCH4III	ACNGT	3 cut(s)	1433, 2209, 2218
HpyCH4IV	ACGT	3 cut(s)	230, 2490, 2598
HpyF3I	CTNAG	8 cut(s)	282, 821, 846, 1120, 1658, 1884, 1898, 2457
HpySE526I	ACGT	3 cut(s)	230, 2490, 2598
HspAI	GCGC	4 cut(s)	315, 320, 2102, 2108
Ksp22I	TGATCA	2 cut(s)	777, 1842
KspAI	GTTAAC	1 cut(s)	1402
LguI	GCTCTTC	1 cut(s)	1728
LmnI	GCTCC	3 cut(s)	1246, 1532, 2037
LweI	GCATC	7 cut(s)	348, 393, 1564, 1605, 1652, 1716, 2089
MaeI	CTAG	2 cut(s)	1751, 2189
MaeII	ACGT	3 cut(s)	230, 2490, 2598
MhlI	GDGCHC	6 cut(s)	45, 1243, 1562, 1740, 2430, 2526
MlsI	TGGCCA	1 cut(s)	977
MluNI	TGGCCA	1 cut(s)	977
MlyI	GAGTC	4 cut(s)	40, 1051, 2124, 2788
MmeI	TCCRAC	2 cut(s)	969, 2756
Mox20I	TGGCCA	1 cut(s)	977
Mph1103I	ATGCAT	2 cut(s)	1105, 1667
MroXI	GAANNNNTTC	4 cut(s)	1041, 1950, 2492, 2660
MscI	TGGCCA	1 cut(s)	977
MseI	TTAA	8 cut(s)	357, 497, 1401, 1769, 2051, 2222, 2342, 2771
MslI	CAYNNNNRTG	3 cut(s)	728, 1707, 2156
Msp20I	TGGCCA	1 cut(s)	977
MspA1I	CMGCKG	2 cut(s)	2327, 2829
MspI	CCGG	2 cut(s)	1353, 1824
MspR9I	CCNGG	3 cut(s)	1788, 1825, 2513
MteI	GCGCNGCGC	1 cut(s)	318
Mva1269I	GAATGC	2 cut(s)	866, 1983
MvaI	CCWGG	2 cut(s)	1788, 2513
MvnI	CGCG	1 cut(s)	143
NciI	CCSGG	1 cut(s)	1825
NlaIV	GGNNCC	3 cut(s)	697, 761, 2152
NmuCI	GTSAC	7 cut(s)	428, 647, 730, 1054, 2077, 2212, 2567
NsiI	ATGCAT	2 cut(s)	1105, 1667
NspI	RCATGY	3 cut(s)	727, 1448, 2069
NspV	TTCGAA	4 cut(s)	248, 453, 1954, 2674
OliI	CACNNNNGTG	1 cut(s)	2156
PaeI	GCATGC	1 cut(s)	727
PagI	TCATGA	1 cut(s)	87
PceI	AGGCCT	3 cut(s)	278, 1454, 1903
PciI	ACATGT	1 cut(s)	1444
PciSI	GCTCTTC	1 cut(s)	1728
PcsI	WCGNNNNNNNCGW	1 cut(s)	792
PctI	GAATGC	2 cut(s)	866, 1983
PdmI	GAANNNNTTC	4 cut(s)	1041, 1950, 2492, 2660
PfeI	GAWTC	7 cut(s)	100, 174, 626, 2143, 2368, 2549, 2671
PleI	GAGTC	4 cut(s)	39, 1051, 2124, 2787
PpsI	GAGTC	4 cut(s)	39, 1051, 2124, 2787
Ppu21I	YACGTR	1 cut(s)	231
PpuMI	RGGWCCY	1 cut(s)	286
PscI	ACATGT	1 cut(s)	1444
Psp124BI	GAGCTC	2 cut(s)	45, 2430
Psp1406I	AACGTT	1 cut(s)	2490
Psp5II	RGGWCCY	1 cut(s)	286
Psp6I	CCWGG	2 cut(s)	1786, 2511
PspFI	CCCAGC	1 cut(s)	2829
PspGI	CCWGG	2 cut(s)	1786, 2511
PspN4I	GGNNCC	3 cut(s)	697, 761, 2152
PspPI	GGNCC	2 cut(s)	286, 760
PspPPI	RGGWCCY	1 cut(s)	286
PstI	CTGCAG	1 cut(s)	1393
PstNI	CAGNNNCTG	3 cut(s)	1007, 2359, 2855
PvuII	CAGCTG	2 cut(s)	2327, 2829
RsaI	GTAC	2 cut(s)	1159, 1174
RsaNI	GTAC	2 cut(s)	1158, 1173
RseI	CAYNNNNRTG	3 cut(s)	728, 1707, 2156
SacI	GAGCTC	2 cut(s)	45, 2430
SapI	GCTCTTC	1 cut(s)	1728
SaqAI	TTAA	8 cut(s)	357, 497, 1401, 1769, 2051, 2222, 2342, 2771
Sau96I	GGNCC	2 cut(s)	286, 760
SchI	GAGTC	4 cut(s)	40, 1051, 2124, 2788
ScrFI	CCNGG	3 cut(s)	1788, 1825, 2513
SduI	GDGCHC	6 cut(s)	45, 1243, 1562, 1740, 2430, 2526
SfaNI	GCATC	7 cut(s)	348, 393, 1564, 1605, 1652, 1716, 2089
SfcI	CTRYAG	2 cut(s)	433, 1389
SfuI	TTCGAA	4 cut(s)	248, 453, 1954, 2674
SinI	GGWCC	1 cut(s)	286
SmiMI	CAYNNNNRTG	3 cut(s)	728, 1707, 2156
SmlI	CTYRAG	2 cut(s)	751, 1561
SmoI	CTYRAG	2 cut(s)	751, 1561
SphI	GCATGC	1 cut(s)	727
SseBI	AGGCCT	3 cut(s)	278, 1454, 1903
SsiI	CCGC	5 cut(s)	205, 721, 1479, 1538, 2441
SspMI	CTAG	2 cut(s)	1751, 2189
SstI	GAGCTC	2 cut(s)	45, 2430
StuI	AGGCCT	3 cut(s)	278, 1454, 1903
StyD4I	CCNGG	3 cut(s)	1786, 1823, 2511
StyI	CCWWGG	1 cut(s)	121
TaaI	ACNGT	3 cut(s)	1433, 2209, 2218
TaiI	ACGT	3 cut(s)	233, 2493, 2601
TaqI	TCGA	8 cut(s)	248, 453, 489, 1413, 1954, 2135, 2452, 2674
TatI	WGTACW	1 cut(s)	1157
TauI	GCSGC	3 cut(s)	207, 723, 2443
TfiI	GAWTC	7 cut(s)	100, 174, 626, 2143, 2368, 2549, 2671
Tru1I	TTAA	8 cut(s)	357, 497, 1401, 1769, 2051, 2222, 2342, 2771
Tru9I	TTAA	8 cut(s)	357, 497, 1401, 1769, 2051, 2222, 2342, 2771
TscAI	CASTG	7 cut(s)	19, 744, 1852, 1938, 2051, 2221, 2451
TseFI	GTSAC	7 cut(s)	428, 647, 730, 1054, 2077, 2212, 2567
Tsp45I	GTSAC	7 cut(s)	428, 647, 730, 1054, 2077, 2212, 2567
TspRI	CASTG	7 cut(s)	19, 744, 1852, 1938, 2051, 2221, 2451
VpaK11BI	GGWCC	1 cut(s)	286
XagI	CCTNNNNNAGG	1 cut(s)	1329
XapI	RAATTY	5 cut(s)	25, 1949, 1995, 2627, 2802
XceI	RCATGY	3 cut(s)	727, 1448, 2069
XcmI	CCANNNNNNNNNTGG	2 cut(s)	985, 2428
XmiI	GTMKAC	3 cut(s)	621, 1267, 1894
XmnI	GAANNNNTTC	4 cut(s)	1041, 1950, 2492, 2660
XspI	CTAG	2 cut(s)	1751, 2189
Zsp2I	ATGCAT	2 cut(s)	1105, 1667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.