pycom13g17500

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
13310319 .. 13314795
4477 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g17500.4

Sequence Viewer

Length: 4005 bp
ATGGAACTTTGTCACCTCGACAATGGCTTCAAAATTGATAACAAATGCCTGACTCAACTCATGAAGGAGAAAAACCTACACCTTCTTCAAGAGCTCGAAGGCATTGATGGCGTTGTATCGGCTCTCCAAACCAACATTGAGCGTGGCATCGACGATGATGGTGACAATGTTGCTCGCCGGCTTGAAGCATTCGGTTCAAACACGTACAAGAAGCCGCCTTCAAAAAGCCTCTTCCATTTTATGTGGCAAGCTTCTAAGGATCTTACCATTGTCATCCTCTTAGGCTGCGCTGCGCTCTCACTCGGATTCGGCATAAAGCAACATGGACTAAAAGAAGGATGGTATGACGGAGGAAGCATCTTTGTCGCGGTTTTTCTTATCGTGGTTGTATCCGCCTTTAGTGACTACAGGCAGAGCAAGCAGTTTCAGAAGTTGTCCAAAGCAAGTGAGGACATTCCAATTGATGTTGTGAGAGGCGGTAGGCGGCGACAGATTTCGAACCTTGATATTGTTGTTGGAGATGTTGTGTTCTTGAAGATTGGAGATCAAGTTCCTGCTGATGGATTGTTCTTGCGTGGACATTCGTTGCGCGTGGACGAATCAAGCATGACGGGGGAGAGTGAGCATGTGGAAGTTAATGGCAGCCTGAATCCGTTCTTGTTTTCAGGAACCAAGGTGGTCGATGGATATGGTGAATTGCTTGTTGCTTCAGTTGGCATGAACTCGACGTGGGGCGAAATGATGAGCTTGATCAGCCGTGACACTAGTGATCAGCAGACACCATTACAAGCGCGACTAAGTAAACTAACCCCTCTGATGGCGAAGATTGGCTTGGGTGTTGCATTCCTAGTTTTCGTGGTCTTGGTAGCGCGCTACTTCACAGGCAACACGAAGAACAAAAGTGAATTTGGTAAGTTTGAGGGCAACAAGACAAAGATTGATGATGTGGTGAATGCTGCGGTGGACATGGTAGCAGTTGCAGTTATTATTGTTGTGATTGCAATTCCTGAAGGCTTCCCGTTGGCTGTCACTCTGACTCTCGCTTATTCGATGAAGAAGATGATGGCGGACCAAGCATTGGTAAGGAGGCTCTCTGCTTGCGAAACTATGGGATGTGCCACAGTAATTTGTACAGACAAGACGGGCACACTGACGCTCAACGAGATGAAGGTTACAAAGTTTTGGCTTGGACAGGAATCTGTGGAAGATGATGCTGGTTATTCATCAATTTCTGATTGCCTTCTTGATTTAATTCGAGAAGGAGTAGCGTTTAACACAACTGGTAGTGTTTATAGGCCTAGTTCAGGATCGGGATTTGAGTTTTCAGGCAGTCCTACTGAAAAAGCCATTCTTTCATGGGCTACTCTAAAGCTGCACATGGACATGGAGAAATTGAAGAAGCAATGTGTCATTCAACATGTTGAAGTCTTCAATTCGCACAAGAAACGAAGTGGGGTTTTGATGAGAAGGAAGGACGACAATACTACCCATGTACATTGGAAAGGAGCTGCAGAAATGATACTAGAAATATGCTCGAGTTACTACGATGCGTCTGGTGTCACAAAAGATCTGAATGATGATGAAAGGTCGAAGTTTGAGGAAATTATTCAAGGCATGGCAGCAAGCAGTCTTCGATGCATTGCTTTTGCACACAAACAAGTTCAGAATAAGCACATTAATGACGAAAAGTATGAAAAGCTCGAAGAAAGCAGCTTGATCCTCTTAGGATTGGTGAAAATGATCACCGGTGACAATGTTTTCACCGCTAAAGCAATAGCTAGCGAGTGTGGGATACTCCGGCCTTGCCAGGAAGCCAAGGAAGCAGTGGTAGAAGGTATAGAATTTCGCAACTTCACGCCAGAGCAAAGAATGCAGAAAGTTGATGGAATTCACGTGATGGCGAGGTCTTCGCCATTTGATAAGCTTCTTATGGTGCAGTGCTTGAAACAGAAAGGCAATGTAGTAGCTGTGACAGGTGATGGCACGAATGATGCGCCCGCACTCAAAGAAGCGGACATAGGACTCTCGATGGGGATTCAGGGAACGGAAGTGGCCAAGGAGAGCTCAGACATTGTCATTTTAGATGACAATTTTGCAACTTTGGTGACTGTTTTAAGATGGGGAAGAGGAGTTTATGCCAACATCCAAAAGTTTGTTCAATTCCAGCTCACAATAAATGTTGCAACTCTTGTGGTCAACTTTGTGGCAGCTGCCTCGGCTGGCGAAGTACCTTTAACAGCGGTCCAACTACTGTGGGTGAATCTGATTATGGACACAATGGCGGCTCTGGCTCTCGCCACCGATAAGCCCACCAAAGAGCTCATGGAAAAGCCACCCGTGGGTCAGACAGATCCCGTGATCACCAACATCATGTGGAGGAACCTTCTACCCCAAGCTTTGTTCCAGATAGTTGTGCTCTTGGTCTTGCAGTTCAAAGGCAGATCAATATTTGGTGTTAGTGACAAGGTAAACAACACATTGATCTTCAATGTATTTGTGTTTTGCCAAGTGTTTAATGAGCTTAATTCAAGGGATATGGAAAGGATTAATATCTTCAAAGGGAGTCAGGGGAACAGGCTGTTTTGGGGCATCCTCGTTGTAACAATTGCAGTTCAGGTGGTTATGGTGGAACTTCTGAACAAGTTTGCAGACACAGAGAGGTTAAGTTGGGGACAATGGGGTGCATGCATTGGGATTGCAGCCATATCTTGGCCAATTAGTTGGGTTTTCAAGTTCATACCAGTACCTGCTAAGCCAATATTCAGCTATCTAAAGAGGGATAGCAAACGTGAGTTAGAGCAGTTGGCCGAGGCAAAGTCCCCATATTGGGAATGGAAATCAACAGGGAAACAGTTTGGAAAAATGCAATACCGAGCTGCATTTGGTCCATTTTTGAATGTTTTTAATGTTTTGAAATTGAAAATTCAGGAAGAACATCGAGACATTATAAAAGGAACACCATTTTGGGGTCTTTTCAAAGCTTATGATGGAGGGTTGGTTAGCGATGATATGTGTAGGAAGACTTATGTAGATATAATTAGAATAATTAATTGTTTCATTGCCGAGACATCTGAATTCAAATTTGGTGATTGGTGTGAAATGTTAACAGGGTTTGAAGTTGAGGAGTTGCTTGGATTACCAAACTTTGGTCAGGATATAAATCTTAATGAACGTTGTTTAAAGTCTGACGAAGGTTTCATTAAAAGAAATTTTAAAACAGTTGACAGAGTTACTAGGCAAAATATTGGATCTGCTATGATTACAATAGTAACGGGGAAAACACAACAGAATCGTGAGGATTTTGTATGCCTAATGTGTATTACATTATTATTTTGTAATAGTGGTAGTACCATCTCTTGGAACATAACTTCCCGTTGTCAAGATGTTCGAACAATGGCGGGCTACAATTGGGCAAAAGCAACATCGGATTGTTTGCAAAAACAACTGGTCCTCTTGTTGCAGATGCATACAATCAGTATGATGATCTGTCGTCGGACCTTACATCGCTACATGGATTGTAAGGTTGAAAGGGAAACAAAGGAAACCGAAACGCTTGACTGGAGGGAACCCAAAAAGGCGAAGCTTAATGAGATGGTACCTAGTGTTGTGAATCCCGCCGAAAATGATGAGATTGTAGACACTACTAAAGGGAAGGCTCAGATAGGATCAGAAGCTATTGGTCGTCACACAGTCAAAGGGAAACAAAGAATTGGTATAACACTCGACCCTTCATGCATGTCAGTGTGGATGTACTTGTCAAATGAAGAACAAGATAGGATGCATCAATATTTTCTTTGCGCTGATTCTGGGGTTCCCTTCTGGAAAGGATCATACTCGGCTGTATATAAGGATGATTTGAGGGACCTGTTAACGGGGTCTGCTGTAACGTGTAATGTCATTGATACTTTCGGGGAAATTTTGCTAGCTGAGTTGGGAAAGGAAGGAAGAATGAAAACCATTTCGCACATTATGACAGCTTATAGCTGGAAGAAAACCACAGTATGA

Protein Analysis

1335

Amino Acids

148.96

Weight (kDa)

6.52

Isoelectric Point (pI)

32.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2948
Acc36I ACCTGC 1 cut(s) 2755
Acc65I GGTACC 1 cut(s) 3595
AccB1I GGYRCC 1 cut(s) 3595
AccB7I CCANNNNNTGG 4 cut(s) 1078, 2709, 3146, 3357
AccI GTMKAC 1 cut(s) 3636
AccII CGCG 4 cut(s) 368, 591, 793, 871
AclI AACGTT 1 cut(s) 3172
AclWI GGATC 7 cut(s) 267, 1315, 1711, 2345, 3256, 3673, 3835
AcoI YGGCCR 3 cut(s) 2052, 2711, 2805
AcsI RAATTY 8 cut(s) 905, 1841, 1887, 2922, 3074, 3080, 3208, 3915
AcuI CTGAAG 2 cut(s) 693, 1029
AcvI CACGTG 1 cut(s) 1894
AfaI GTAC 8 cut(s) 206, 1132, 1494, 2229, 2745, 3349, 3597, 3752
AflIII ACRYGT 3 cut(s) 201, 1417, 3887
AgeI ACCGGT 1 cut(s) 1745
AhlI ACTAGT 1 cut(s) 764
AjiI CACGTC 1 cut(s) 729
AjnI CCWGG 1 cut(s) 1806
AjuI GAANNNNNNNTTGG 8 cut(s) 815, 847, 2139, 2171, 2947, 2979, 3066, 3098
AloI GAACNNNNNNTCC 4 cut(s) 534, 566, 3353, 3385
Alw21I GWGCWC 4 cut(s) 96, 2066, 2322, 2418
Alw26I GTCTC 2 cut(s) 2934, 3059
AlwI GGATC 7 cut(s) 267, 1315, 1711, 2345, 3256, 3673, 3835
AlwNI CAGNNNCTG 1 cut(s) 2747
Ama87I CYCGRG 1 cut(s) 1534
AoxI GGCC 5 cut(s) 1295, 1799, 2052, 2711, 2805
ApoI RAATTY 8 cut(s) 905, 1841, 1887, 2922, 3074, 3080, 3208, 3915
AseI ATTAAT 3 cut(s) 1677, 2547, 3048
AsiGI ACCGGT 1 cut(s) 1745
Asp700I GAANNNNTTC 2 cut(s) 653, 1605
Asp718I GGTACC 1 cut(s) 3595
AspLEI GCGC 8 cut(s) 290, 295, 591, 793, 871, 873, 1996, 3800
AspS9I GGNCC 6 cut(s) 1069, 2242, 2885, 3448, 3495, 3862
AsuII TTCGAA 2 cut(s) 497, 3388
AsuNHI GCTAGC 2 cut(s) 1778, 3922
AvaI CYCGRG 1 cut(s) 1534
AvaII GGWCC 6 cut(s) 1069, 2242, 2885, 3448, 3495, 3862
BaeGI GKGCMC 1 cut(s) 1148
BalI TGGCCA 2 cut(s) 2054, 2713
BanI GGYRCC 1 cut(s) 3595
BanII GRGCYC 3 cut(s) 96, 2066, 2322
BbrPI CACGTG 1 cut(s) 1894
BbsI GAAGAC 4 cut(s) 1420, 1622, 1899, 3026
Bbv12I GWGCWC 4 cut(s) 96, 2066, 2322, 2418
BceAI ACGGC 1 cut(s) 741
BcgI CGANNNNNNTGC 4 cut(s) 346, 380, 2196, 2230
BciT130I CCWGG 1 cut(s) 1808
BciVI GTATCC 2 cut(s) 400, 1785
BclI TGATCA 4 cut(s) 750, 769, 1740, 2358
BcoDI GTCTC 2 cut(s) 2934, 3059
BcuI ACTAGT 1 cut(s) 764
BfaI CTAG 8 cut(s) 765, 848, 1299, 1523, 1779, 3234, 3600, 3923
BfmI CTRYAG 2 cut(s) 406, 1509
BfuAI ACCTGC 1 cut(s) 2755
BfuI GTATCC 2 cut(s) 400, 1785
BglII AGATCT 1 cut(s) 1567
BlpI GCTNAGC 1 cut(s) 2751
Bme1390I CCNGG 1 cut(s) 1808
Bme18I GGWCC 6 cut(s) 1069, 2242, 2885, 3448, 3495, 3862
BmeT110I CYCGRG 1 cut(s) 1534
BmgBI CACGTC 1 cut(s) 729
BmgT120I GGNCC 6 cut(s) 1069, 2242, 2885, 3448, 3495, 3862
BmiI GGNNCC 6 cut(s) 670, 2381, 3567, 3597, 3813, 3863
BmrFI CCNGG 1 cut(s) 1808
BmtI GCTAGC 2 cut(s) 1782, 3926
BpiI GAAGAC 4 cut(s) 1420, 1622, 1899, 3026
BpmI CTGGAG 1 cut(s) 3580
Bpu1102I GCTNAGC 1 cut(s) 2751
Bpu14I TTCGAA 2 cut(s) 497, 3388
BsaAI YACGTR 2 cut(s) 204, 1894
BsaBI GATNNNNATC 2 cut(s) 2549, 3159
BsaJI CCNNGG 6 cut(s) 672, 1815, 2055, 2214, 2337, 2808
BsaWI WCCGGW 1 cut(s) 1745
BsaXI ACNNNNNCTCC 6 cut(s) 510, 534, 540, 564, 2982, 3012
Bse118I RCCGGY 2 cut(s) 177, 1745
Bse1I ACTGG 4 cut(s) 1285, 2741, 3450, 3563
Bse3DI GCAATG 4 cut(s) 1409, 1638, 1963, 3057
Bse8I GATNNNNATC 2 cut(s) 2549, 3159
BseBI CCWGG 1 cut(s) 1808
BseDI CCNNGG 6 cut(s) 672, 1815, 2055, 2214, 2337, 2808
BseGI GGATG 8 cut(s) 273, 344, 1118, 2142, 2589, 3753, 3783, 3856
BseJI GATNNNNATC 2 cut(s) 2549, 3159
BseMI GCAATG 4 cut(s) 1409, 1638, 1963, 3057
BseMII CTCAG 3 cut(s) 2079, 3671, 3918
BseNI ACTGG 4 cut(s) 1285, 2741, 3450, 3563
BsePI GCGCGC 1 cut(s) 869
BseRI GAGGAG 2 cut(s) 2142, 3137
BseSI GKGCMC 1 cut(s) 1148
BsgI GTGCAG 2 cut(s) 1358, 1955
Bsh1236I CGCG 4 cut(s) 368, 591, 793, 871
BshFI GGCC 5 cut(s) 1297, 1801, 2054, 2713, 2807
BshNI GGYRCC 1 cut(s) 3595
BshTI ACCGGT 1 cut(s) 1745
BsiHKAI GWGCWC 4 cut(s) 96, 2066, 2322, 2418
BsiHKCI CYCGRG 1 cut(s) 1534
BsiSI CCGG 3 cut(s) 178, 1746, 1798
BslFI GGGAC 3 cut(s) 2685, 2803, 3875
BsmAI GTCTC 2 cut(s) 2934, 3059
BsmFI GGGAC 3 cut(s) 2685, 2803, 3875
BsmI GAATGC 4 cut(s) 188, 842, 958, 1875
BsnI GGCC 5 cut(s) 1297, 1801, 2054, 2713, 2807
BsoBI CYCGRG 1 cut(s) 1534
Bsp119I TTCGAA 2 cut(s) 497, 3388
Bsp1286I GDGCHC 5 cut(s) 96, 1148, 2066, 2322, 2418
Bsp1407I TGTACA 2 cut(s) 1130, 1492
Bsp1720I GCTNAGC 1 cut(s) 2751
BspANI GGCC 5 cut(s) 1297, 1801, 2054, 2713, 2807
BspCNI CTCAG 3 cut(s) 2078, 3670, 3919
BspFNI CGCG 4 cut(s) 368, 591, 793, 871
BspHI TCATGA 1 cut(s) 60
BspLI GGNNCC 6 cut(s) 670, 2381, 3567, 3597, 3813, 3863
BspMAI CTGCAG 1 cut(s) 1513
BspMI ACCTGC 1 cut(s) 2755
BspOI GCTAGC 2 cut(s) 1782, 3926
BspPI GGATC 7 cut(s) 267, 1315, 1711, 2345, 3256, 3673, 3835
BspT104I TTCGAA 2 cut(s) 497, 3388
BspT107I GGYRCC 1 cut(s) 3595
BsrDI GCAATG 4 cut(s) 1409, 1638, 1963, 3057
BsrFI RCCGGY 2 cut(s) 177, 1745
BsrGI TGTACA 2 cut(s) 1130, 1492
BsrI ACTGG 4 cut(s) 1285, 2741, 3450, 3563
BssAI RCCGGY 2 cut(s) 177, 1745
BssECI CCNNGG 6 cut(s) 672, 1815, 2055, 2214, 2337, 2808
BssHII GCGCGC 1 cut(s) 869
BssT1I CCWWGG 3 cut(s) 672, 1815, 2055
Bst2UI CCWGG 1 cut(s) 1808
Bst4CI ACNGT 7 cut(s) 1123, 2110, 2253, 2853, 3220, 3691, 4000
Bst6I CTCTTC 2 cut(s) 236, 2119
BstAPI GCANNNNNTGC 1 cut(s) 1870
BstAUI TGTACA 2 cut(s) 1130, 1492
BstBAI YACGTR 2 cut(s) 204, 1894
BstBI TTCGAA 2 cut(s) 497, 3388
BstDEI CTNAG 8 cut(s) 255, 280, 797, 1723, 2065, 2751, 3657, 3927
BstDSI CCRYGG 1 cut(s) 2337
BstENI CCTNNNNNAGG 1 cut(s) 1302
BstF5I GGATG 8 cut(s) 273, 344, 1118, 2142, 2589, 3753, 3783, 3856
BstFNI CGCG 4 cut(s) 368, 591, 793, 871
BstHHI GCGC 8 cut(s) 290, 295, 591, 793, 871, 873, 1996, 3800
BstMAI GTCTC 2 cut(s) 2934, 3059
BstMWI GCNNNNNNNGC 8 cut(s) 108, 418, 753, 1073, 1820, 1870, 2216, 2288
BstNI CCWGG 1 cut(s) 1808
BstNSI RCATGY 4 cut(s) 629, 1421, 2688, 3739
BstSCI CCNGG 1 cut(s) 1806
BstSFI CTRYAG 2 cut(s) 406, 1509
BstSLI GKGCMC 1 cut(s) 1148
BstUI CGCG 4 cut(s) 368, 591, 793, 871
BstV2I GAAGAC 4 cut(s) 1420, 1622, 1899, 3026
BstX2I RGATCY 4 cut(s) 259, 1567, 2350, 3248
BstXI CCANNNNNNTGG 1 cut(s) 2721
BstYI RGATCY 4 cut(s) 259, 1567, 2350, 3248
BsuI GTATCC 2 cut(s) 400, 1785
BsuRI GGCC 5 cut(s) 1297, 1801, 2054, 2713, 2807
BtgI CCRYGG 1 cut(s) 2337
BtgZI GCGATG 2 cut(s) 3018, 3488
BtrI CACGTC 1 cut(s) 729
BtsCI GGATG 8 cut(s) 273, 344, 1118, 2142, 2589, 3753, 3783, 3856
BtsI GCAGTG 2 cut(s) 1830, 1943
BtsIMutI CAGTG 4 cut(s) 1148, 1830, 1943, 3747
BveI ACCTGC 1 cut(s) 2755
CaiI CAGNNNCTG 1 cut(s) 2747
CciI TCATGA 1 cut(s) 60
CfoI GCGC 8 cut(s) 290, 295, 591, 793, 871, 873, 1996, 3800
Cfr10I RCCGGY 2 cut(s) 177, 1745
Cfr13I GGNCC 6 cut(s) 1069, 2242, 2885, 3448, 3495, 3862
CseI GACGC 2 cut(s) 1162, 1539
Csp6I GTAC 8 cut(s) 205, 1131, 1493, 2228, 2744, 3348, 3596, 3751
CspAI ACCGGT 1 cut(s) 1745
CspCI CAANNNNNGTGG 4 cut(s) 2172, 2207, 2234, 2269
CviQI GTAC 8 cut(s) 205, 1131, 1493, 2228, 2744, 3348, 3596, 3751
DdeI CTNAG 8 cut(s) 255, 280, 797, 1723, 2065, 2751, 3657, 3927
DraI TTTAAA 2 cut(s) 3180, 3214
EaeI YGGCCR 3 cut(s) 2052, 2711, 2805
Eam1104I CTCTTC 2 cut(s) 236, 2119
EarI CTCTTC 2 cut(s) 236, 2119
EciI GGCGGA 2 cut(s) 382, 1082
Ecl136II GAGCTC 3 cut(s) 94, 2064, 2320
Eco130I CCWWGG 3 cut(s) 672, 1815, 2055
Eco147I AGGCCT 1 cut(s) 1297
Eco24I GRGCYC 3 cut(s) 96, 2066, 2322
Eco47I GGWCC 6 cut(s) 1069, 2242, 2885, 3448, 3495, 3862
Eco53kI GAGCTC 3 cut(s) 94, 2064, 2320
Eco57I CTGAAG 2 cut(s) 693, 1029
Eco72I CACGTG 1 cut(s) 1894
Eco88I CYCGRG 1 cut(s) 1534
EcoICRI GAGCTC 3 cut(s) 94, 2064, 2320
EcoNI CCTNNNNNAGG 1 cut(s) 1302
EcoO109I RGGNCCY 1 cut(s) 3862
EcoRI GAATTC 2 cut(s) 1887, 3074
EcoRII CCWGG 1 cut(s) 1806
EcoT14I CCWWGG 3 cut(s) 672, 1815, 2055
EcoT22I ATGCAT 5 cut(s) 1640, 2690, 3468, 3737, 3783
EcoT38I GRGCYC 3 cut(s) 96, 2066, 2322
ErhI CCWWGG 3 cut(s) 672, 1815, 2055
FalI AAGNNNNNCTT 4 cut(s) 815, 847, 1335, 1367
FaqI GGGAC 3 cut(s) 2685, 2803, 3875
FauI CCCGC 3 cut(s) 2005, 3391, 3622
FbaI TGATCA 4 cut(s) 750, 769, 1740, 2358
FblI GTMKAC 1 cut(s) 3636
FokI GGATG 8 cut(s) 260, 351, 1125, 2129, 2576, 3760, 3790, 3863
FriOI GRGCYC 3 cut(s) 96, 2066, 2322
FspBI CTAG 8 cut(s) 765, 848, 1299, 1523, 1779, 3234, 3600, 3923
GlaI GCGC 8 cut(s) 289, 294, 590, 792, 870, 872, 1995, 3799
GsuI CTGGAG 1 cut(s) 3580
HaeIII GGCC 5 cut(s) 1297, 1801, 2054, 2713, 2807
HapII CCGG 3 cut(s) 178, 1746, 1798
HgaI GACGC 2 cut(s) 1162, 1539
HhaI GCGC 8 cut(s) 290, 295, 591, 793, 871, 873, 1996, 3800
Hin6I GCGC 8 cut(s) 288, 293, 589, 791, 869, 871, 1994, 3798
HinP1I GCGC 8 cut(s) 288, 293, 589, 791, 869, 871, 1994, 3798
HincII GTYRAC 4 cut(s) 2197, 3105, 3223, 3870
HindII GTYRAC 4 cut(s) 2197, 3105, 3223, 3870
HindIII AAGCTT 5 cut(s) 249, 1922, 2394, 2979, 3581
HpaI GTTAAC 2 cut(s) 3105, 3870
HpaII CCGG 3 cut(s) 178, 1746, 1798
Hpy99I CGWCG 3 cut(s) 155, 730, 3495
HpyCH4III ACNGT 7 cut(s) 1123, 2110, 2253, 2853, 3220, 3691, 4000
HpyCH4IV ACGT 6 cut(s) 203, 728, 1893, 2788, 3172, 3887
HpyF10VI GCNNNNNNNGC 8 cut(s) 108, 418, 753, 1073, 1820, 1870, 2216, 2288
HpyF3I CTNAG 8 cut(s) 255, 280, 797, 1723, 2065, 2751, 3657, 3927
HpySE526I ACGT 6 cut(s) 203, 728, 1893, 2788, 3172, 3887
HspAI GCGC 8 cut(s) 288, 293, 589, 791, 869, 871, 1994, 3798
KpnI GGTACC 1 cut(s) 3599
KroI GCCGGC 1 cut(s) 177
KroNI GCCGGC 1 cut(s) 179
Ksp22I TGATCA 4 cut(s) 750, 769, 1740, 2358
KspAI GTTAAC 2 cut(s) 3105, 3870
LmnI GCTCC 1 cut(s) 1505
MaeI CTAG 8 cut(s) 765, 848, 1299, 1523, 1779, 3234, 3600, 3923
MaeII ACGT 6 cut(s) 203, 728, 1893, 2788, 3172, 3887
MfeI CAATTG 3 cut(s) 459, 2604, 3406
MflI RGATCY 4 cut(s) 259, 1567, 2350, 3248
MhlI GDGCHC 5 cut(s) 96, 1148, 2066, 2322, 2418
MlsI TGGCCA 2 cut(s) 2054, 2713
MluNI TGGCCA 2 cut(s) 2054, 2713
MlyI GAGTC 4 cut(s) 46, 1030, 2016, 2572
MmeI TCCRAC 3 cut(s) 496, 2269, 3473
Mox20I TGGCCA 2 cut(s) 2054, 2713
Mph1103I ATGCAT 5 cut(s) 1640, 2690, 3468, 3737, 3783
MroNI GCCGGC 1 cut(s) 177
MroXI GAANNNNTTC 2 cut(s) 653, 1605
MscI TGGCCA 2 cut(s) 2054, 2713
MslI CAYNNNNRTG 3 cut(s) 1382, 1677, 3740
Msp20I TGGCCA 2 cut(s) 2054, 2713
MspA1I CMGCKG 2 cut(s) 2210, 2240
MspI CCGG 3 cut(s) 178, 1746, 1798
MspR9I CCNGG 1 cut(s) 1808
MteI GCGCNGCGC 1 cut(s) 291
MunI CAATTG 3 cut(s) 459, 2604, 3406
Mva1269I GAATGC 4 cut(s) 188, 842, 958, 1875
MvaI CCWGG 1 cut(s) 1808
MvnI CGCG 4 cut(s) 368, 591, 793, 871
MwoI GCNNNNNNNGC 8 cut(s) 108, 418, 753, 1073, 1820, 1870, 2216, 2288
NaeI GCCGGC 1 cut(s) 179
NgoMIV GCCGGC 1 cut(s) 177
NheI GCTAGC 2 cut(s) 1778, 3922
NlaIV GGNNCC 6 cut(s) 670, 2381, 3567, 3597, 3813, 3863
NmeAIII GCCGAG 4 cut(s) 2195, 2833, 3088, 3815
NsiI ATGCAT 5 cut(s) 1640, 2690, 3468, 3737, 3783
NspI RCATGY 4 cut(s) 629, 1421, 2688, 3739
NspV TTCGAA 2 cut(s) 497, 3388
PaeI GCATGC 1 cut(s) 2688
PaeR7I CTCGAG 1 cut(s) 1534
PagI TCATGA 1 cut(s) 60
PauI GCGCGC 1 cut(s) 869
PceI AGGCCT 1 cut(s) 1297
PciI ACATGT 1 cut(s) 1417
PctI GAATGC 4 cut(s) 188, 842, 958, 1875
PdiI GCCGGC 1 cut(s) 179
PdmI GAANNNNTTC 2 cut(s) 653, 1605
PfeI GAWTC 9 cut(s) 306, 599, 649, 1196, 2035, 2260, 3289, 3610, 3803
PflFI GACNNNGTC 1 cut(s) 2072
PflMI CCANNNNNTGG 4 cut(s) 1078, 2709, 3146, 3357
PinAI ACCGGT 1 cut(s) 1745
PleI GAGTC 4 cut(s) 46, 1030, 2016, 2571
PmaCI CACGTG 1 cut(s) 1894
PmlI CACGTG 1 cut(s) 1894
PpsI GAGTC 4 cut(s) 46, 1030, 2016, 2571
Ppu21I YACGTR 2 cut(s) 204, 1894
PpuMI RGGWCCY 1 cut(s) 3862
PscI ACATGT 1 cut(s) 1417
PshBI ATTAAT 3 cut(s) 1677, 2547, 3048
PsiI TTATAA 1 cut(s) 2948
Psp124BI GAGCTC 3 cut(s) 96, 2066, 2322
Psp1406I AACGTT 1 cut(s) 3172
Psp5II RGGWCCY 1 cut(s) 3862
Psp6I CCWGG 1 cut(s) 1806
PspCI CACGTG 1 cut(s) 1894
PspGI CCWGG 1 cut(s) 1806
PspN4I GGNNCC 6 cut(s) 670, 2381, 3567, 3597, 3813, 3863
PspPI GGNCC 6 cut(s) 1069, 2242, 2885, 3448, 3495, 3862
PspPPI RGGWCCY 1 cut(s) 3862
PspXI VCTCGAGB 1 cut(s) 1534
PstI CTGCAG 1 cut(s) 1513
PstNI CAGNNNCTG 1 cut(s) 2747
PsuI RGATCY 4 cut(s) 259, 1567, 2350, 3248
PsyI GACNNNGTC 1 cut(s) 2072
PteI GCGCGC 1 cut(s) 869
PvuII CAGCTG 1 cut(s) 2210
RsaI GTAC 8 cut(s) 206, 1132, 1494, 2229, 2745, 3349, 3597, 3752
RsaNI GTAC 8 cut(s) 205, 1131, 1493, 2228, 2744, 3348, 3596, 3751
RseI CAYNNNNRTG 3 cut(s) 1382, 1677, 3740
SacI GAGCTC 3 cut(s) 96, 2066, 2322
Sau96I GGNCC 6 cut(s) 1069, 2242, 2885, 3448, 3495, 3862
SchI GAGTC 4 cut(s) 46, 1030, 2016, 2572
ScrFI CCNGG 1 cut(s) 1808
SduI GDGCHC 5 cut(s) 96, 1148, 2066, 2322, 2418
SfcI CTRYAG 2 cut(s) 406, 1509
Sfr274I CTCGAG 1 cut(s) 1534
SfuI TTCGAA 2 cut(s) 497, 3388
SgrAI CRCCGGYG 1 cut(s) 1745
SinI GGWCC 6 cut(s) 1069, 2242, 2885, 3448, 3495, 3862
SlaI CTCGAG 1 cut(s) 1534
SmiMI CAYNNNNRTG 3 cut(s) 1382, 1677, 3740
SmlI CTYRAG 1 cut(s) 1534
SmoI CTYRAG 1 cut(s) 1534
SpeI ACTAGT 1 cut(s) 764
SphI GCATGC 1 cut(s) 2688
SseBI AGGCCT 1 cut(s) 1297
SspI AATATT 4 cut(s) 2448, 2760, 3244, 3788
SspMI CTAG 8 cut(s) 765, 848, 1299, 1523, 1779, 3234, 3600, 3923
SstI GAGCTC 3 cut(s) 96, 2066, 2322
StuI AGGCCT 1 cut(s) 1297
StyD4I CCNGG 1 cut(s) 1806
StyI CCWWGG 3 cut(s) 672, 1815, 2055
TaaI ACNGT 7 cut(s) 1123, 2110, 2253, 2853, 3220, 3691, 4000
TaiI ACGT 6 cut(s) 206, 731, 1896, 2791, 3175, 3890
TatI WGTACW 3 cut(s) 1130, 1492, 3750
TauI GCSGC 3 cut(s) 217, 487, 2285
TfiI GAWTC 9 cut(s) 306, 599, 649, 1196, 2035, 2260, 3289, 3610, 3803
TscAI CASTG 4 cut(s) 1155, 1830, 1943, 3747
TspGWI ACGGA 3 cut(s) 363, 642, 2060
TspRI CASTG 4 cut(s) 1155, 1830, 1943, 3747
Tth111I GACNNNGTC 1 cut(s) 2072
Van91I CCANNNNNTGG 4 cut(s) 1078, 2709, 3146, 3357
VpaK11BI GGWCC 6 cut(s) 1069, 2242, 2885, 3448, 3495, 3862
VspI ATTAAT 3 cut(s) 1677, 2547, 3048
XagI CCTNNNNNAGG 1 cut(s) 1302
XapI RAATTY 8 cut(s) 905, 1841, 1887, 2922, 3074, 3080, 3208, 3915
XceI RCATGY 4 cut(s) 629, 1421, 2688, 3739
XcmI CCANNNNNNNNNTGG 3 cut(s) 1822, 2320, 2829
XhoI CTCGAG 1 cut(s) 1534
XmiI GTMKAC 1 cut(s) 3636
XmnI GAANNNNTTC 2 cut(s) 653, 1605
XspI CTAG 8 cut(s) 765, 848, 1299, 1523, 1779, 3234, 3600, 3923
Zsp2I ATGCAT 5 cut(s) 1640, 2690, 3468, 3737, 3783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.