Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0000174

Physical Location & Seq

Genomic Coordinates Forward (+)

2583580 .. 2586579

Gene Structure 3000 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G001430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3000 bp

ATGCCTGAAACGACCGTTACCACTGTGTCCTCAGATTTGGGGTGTCTTAATGTTCCTCTAACCATACACAAAAAGAGATGGCGTTCGGCGTTTGTCACCATTTACTGCTCTAGAGCTTTCCAGTCATTCTTCCCGTCAGTATCAGACAACAACGGTTTCAATCTAAACCAAAAAACCCTCACTCAGCTTGTGAAGGATAAAAGTCTTGATCAGCTCGAGGAGTTCGGAGGGGTTGAAGGAGTAGCATCAGCTCTCAAAACTGATGCAGCGCTTGGAGTTTGCGGTGATGCTGAAGATGTTGCACACCGACTCGAAGCATTTGGTTCGAATACATACAAGACAGAGACAACCAAAAGGTTCTTCCATTTTGTGTGGGAAGCATGCCAAGACCTCACAATTTTCATTCTTATAGGCTGTGCTGTACATTCTCTTGCTTTTGGCATCGTGGAGCATGGATTAAGAGAAGGTTGGAGTGATGGTGGAAGCATATTTCTCGCAGTTATTCTGGTGATTTCAGTGTCTGCCACAAGCAATTACAGGCAGCACAGAGAGTTTGACAAATTGTCAAAAGTCGGTAGCAATCTCCAAATTGAAGCTGTGAGAAATGGCGAGAGACAACAGATTTCAATATTCAAAATTGTGGTTGGAGATGTCATTTGCTTAAAGAATGGAGATCAAGTTCCAGCTGATGGGTTGCTCTTGGAGGGATATTCATTGGAAGTAGACGAATCAAGCATGACAGGGGAGAGTGACCATGTCGAAATCAACCAAAGCCAGAACCCCTTCTTGTTTTCCGGCACCAAAGTGGTTGAGGGGTATGCACAGATGCTTGTCACTTCCGTCGGCATGAACACAACATGGGGCGAAATGATGAGCCATATCAGCAGTGATGGAAGTGAACAGACACCTTTACAAGCTCGCATCCATGGGCTAGCCTCATCAATAGGTATAGTTGGTTTGCTAGTAGCTTTGTCAAATCTCATAGTCTCAAAGATATACTACTTCACCGGAAATACCAAGGACAAACATGGCAAGAAGGAGTTCAATGGGAGCAGAACCAAAGTTAATCGCATAATAATGGCCGTGGTTGGGATGGTAGGAACTGCAGTTACAATTGTTGTGGCTGCAATTCCAGAAGGTTTACCAGTCGCCATGACGATAACTTTTTGTTACGCTATGAAGAGAATGATGGCTGAAAAAGCAATGGTTAGGAAACTCTCTGCTTGTGAGATTATGGGCTCTGCTACCACCATTTGCACTGACAAAACAGGAACTCTCACGATGAACCAGATGAAGGTGGCCAAGTTCTGGATAGGTGAAAAGCCCGTGGAAGAAGCCTACTCATCAATTTCATCCCGTCTTCTTAGCTTGATTCAAGAAGGGGTTGCTATGAACACAACCGGCTGTGCTTCTAGGCACATTTCAGGATCTGGATTTGAATTTTCAGGCAGTCCTACTGAAAAAGCCATTCTTTCATGGGCATCTCTGGAGCTGCATATGGACATGGAGAGATTGAAAAACAATTCCGTCATTCAAGATGTTGAAGCCTTCAATTCACACAGGAAACGAAGTGGTATTTTGATCAAGAGGAAGATAGACAACACAATGCAAGTACATTGGAAAGGAGCTGCAGAGGTGATACTAGCAATGTGCACCAGTTACCACAATGCCTCTGGAGATATAAAAGATATGGATGATGATGCAAAGAAAATACTCGAGCATATTATTCAAGGTATGGCAGCTAGTAGGCTCCGATGCATTGCACTTGCACACAAAGAAGTATATGCAGAGGAGCAAGTGGATCCAGAACACAAGACTTTGCTAAAAGACAATGGCTTGACCCTATTAGGACTTGTGGGTCTTAAAGATCCATGTCGGCCAGGAGTGAAGAAAGCTGTTGAGGACTGTCAACATGCAGGGGTCAACATCAAAATGATCACAGGGGACAACATTTTTACTGCAAAATCAATAGCCACAGAATGTGGGATACTCAAGCCTGAGGAGGACAAGAACAGTGATGCTGTGATAGAGGGTGTGCAATTTCGGAGCTACACACCAGAAGAGAGAATGCAGAAAGTAGACAATATCCGTGTCATGGCAAGGTCATCCCCTTCTGATAAGCTTCTTATGGTGCAATGCTTGAAGCAGAAAGGTCATGTAGTTGCAGTGACTGGTGATGGCACAAATGATGCTCCTGCATTGAAAGAAGCTGACGTAGGTCTCTCTATGGGGATGCAAGGCACTGAAGTTGCGAAAGATAGCTCAGACATTGTGATCATGGATGACAATTTTGCTTCAGTGGCCACAGTTTTGATGTGGGGAAGATGTGTGTACAATAACATCCAAAAGTTCATTCAATTCCAACTCACTGTCAATGTTGCAGCTCTTGTGATCAACTTTGTGGCAGCAGTTTCAGCAAGTAAGGTGCCCTTAACAGCAGTTCAATTATTGTGGGTGAACTTGATTATGGACACACTCGGTGCTCTGGCCCTTGCGACAGACAAACCCACAAAAGAACTCATGGAGAATCCACCTGTGAGAAGAACGGAGCCTCTCATCACCAACATCATGTGGAGGAACCTTTTACCTCAAGCTATGTACCAGATAGCAGTAGTATTGACCTTACGATTCAGGGGCAACACAATCTTTGGTGTAGACGATCAAGTACAAGATACCTTGATCTTTAACACGTTTGTGCTCTGCCAGGTCTTCAATGAATTCAACGCAAGGAAGCTTGAGAAGAAGAATGTTTTCAAGGGACTGCTCACCAACAAAATCTTTTTGGGGATCATTGCACTAATAATCGTTCTGCAGCTGGTGATGGTGGAACTTTTGAACAAATATGCAGATACGGAGAGGTTGAATTGGGGGCAATGGGGTGTATGTCTTGGAATTGCGGCCATCTCTTGGCCACTCGGTTGGGTTGTCAAGTGTCTACCTGTTCCAAAGAAACCTATCGTCAGCTATCTGGAGGTGAAGAAATATAAGAACGCCAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

999

Amino Acids

109.81

Weight (kDa)

6.86

Isoelectric Point (pI)

31.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	76 - 141	3e-10	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	199 - 294	4.1e-23	P-type ATPase actuator domain
Hydrolase	PF00702	417 - 738	7.4e-14	haloacid dehalogenase-like hydrolase
Cation_ATPase	PF13246	456 - 627	2.1e-26	P-type ATPase, cytoplasmic domain N
Cation_ATPase_C	PF00689	809 - 978	6.7e-48	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0000174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22910
fragaria_vesca	FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica	MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica	Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis	pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis	RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata	RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora	Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa	Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha	Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana	Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1857
AccB1I	GGYRCC	2 cut(s)	797, 2425
AccB7I	CCANNNNNTGG	3 cut(s)	689, 1308, 2907
AccI	GTMKAC	4 cut(s)	723, 2079, 2655, 2935
AciI	CCGC	2 cut(s)	282, 2897
AclWI	GGATC	5 cut(s)	1435, 1796, 1809, 1862, 2795
AcoI	YGGCCR	6 cut(s)	1080, 1299, 1877, 2301, 2898, 2909
AcsI	RAATTY	2 cut(s)	1439, 2717
AcuI	CTGAAG	3 cut(s)	312, 2265, 2280
AdeI	CACNNNGTG	1 cut(s)	2480
AfaI	GTAC	5 cut(s)	423, 1614, 2333, 2600, 2667
AfeI	AGCGCT	1 cut(s)	270
AfiI	CCNNNNNNNGG	6 cut(s)	689, 1089, 1294, 1308, 2095, 2907
AflIII	ACRYGT	1 cut(s)	2688
AhdI	GACNNNNNGTC	1 cut(s)	562
AjnI	CCWGG	2 cut(s)	1879, 2703
AjuI	GAANNNNNNNTTGG	4 cut(s)	344, 376, 2337, 2369
AleI	CACNNNNGTG	2 cut(s)	803, 2693
AloI	GAACNNNNNNTCC	2 cut(s)	663, 695
Alw21I	GWGCWC	3 cut(s)	1655, 2485, 2700
Alw26I	GTCTC	4 cut(s)	338, 607, 991, 2225
Alw44I	GTGCAC	1 cut(s)	1651
AlwI	GGATC	5 cut(s)	1435, 1796, 1809, 1862, 2795
AlwNI	CAGNNNCTG	3 cut(s)	521, 1430, 2171
Ama87I	CYCGRG	2 cut(s)	215, 1715
Aor51HI	AGCGCT	1 cut(s)	270
AoxI	GGCC	7 cut(s)	1080, 1299, 1877, 2301, 2487, 2898, 2909
ApaLI	GTGCAC	1 cut(s)	1651
ApeKI	GCWGC	9 cut(s)	266, 541, 1124, 1492, 1628, 1739, 2381, 2405, 2812
ApoI	RAATTY	2 cut(s)	1439, 2717
Asp700I	GAANNNNTTC	3 cut(s)	782, 1040, 2750
AspLEI	GCGC	1 cut(s)	271
AspS9I	GGNCC	1 cut(s)	2488
AsuII	TTCGAA	1 cut(s)	326
AsuNHI	GCTAGC	1 cut(s)	931
AvaI	CYCGRG	2 cut(s)	215, 1715
AxyI	CCTNAGG	1 cut(s)	1998
BaeGI	GKGCMC	2 cut(s)	1655, 2430
BalI	TGGCCA	3 cut(s)	1301, 2303, 2911
BamHI	GGATCC	1 cut(s)	1801
BanI	GGYRCC	2 cut(s)	797, 2425
BanII	GRGCYC	1 cut(s)	1241
BbsI	GAAGAC	2 cut(s)	1352, 2701
Bbv12I	GWGCWC	3 cut(s)	1655, 2485, 2700
BbvI	GCAGC	9 cut(s)	278, 553, 1111, 1479, 1615, 1751, 2393, 2417, 2824
BccI	CCATC	9 cut(s)	72, 470, 683, 884, 1087, 1183, 2171, 2815, 2909
BceAI	ACGGC	1 cut(s)	1067
BcgI	CGANNNNNNTGC	4 cut(s)	306, 340, 475, 509
BciT130I	CCWGG	2 cut(s)	1881, 2705
BciVI	GTATCC	1 cut(s)	1980
BclI	TGATCA	5 cut(s)	208, 1581, 1935, 2274, 2391
BcoDI	GTCTC	4 cut(s)	338, 607, 991, 2225
BfaI	CTAG	6 cut(s)	111, 932, 962, 1413, 1643, 1743
BfmI	CTRYAG	3 cut(s)	1104, 1629, 2810
BfoI	RGCGCY	1 cut(s)	272
BfuI	GTATCC	1 cut(s)	1980
Bme1390I	CCNGG	2 cut(s)	1881, 2705
BmeRI	GACNNNNNGTC	1 cut(s)	562
BmeT110I	CYCGRG	2 cut(s)	215, 1715
BmgT120I	GGNCC	1 cut(s)	2488
BmiI	GGNNCC	6 cut(s)	799, 1751, 1803, 2427, 2550, 2579
BmrFI	CCNGG	2 cut(s)	1881, 2705
BmtI	GCTAGC	1 cut(s)	935
BoxI	GACNNNNGTC	1 cut(s)	2217
BpiI	GAAGAC	2 cut(s)	1352, 2701
BpmI	CTGGAG	3 cut(s)	1508, 1695, 2990
Bpu14I	TTCGAA	1 cut(s)	326
BpuEI	CTTGAG	3 cut(s)	1976, 2574, 2756
BsaI	GGTCTC	1 cut(s)	2225
BsaJI	CCNNGG	4 cut(s)	925, 1017, 1083, 1326
BsaWI	WCCGGW	1 cut(s)	1007
BsaXI	ACNNNNNCTCC	4 cut(s)	463, 493, 663, 693
Bsc4I	CCNNNNNNNGG	6 cut(s)	689, 1089, 1294, 1308, 2095, 2907
Bse118I	RCCGGY	1 cut(s)	1400
Bse1I	ACTGG	5 cut(s)	121, 1145, 1656, 2176, 2994
Bse21I	CCTNAGG	1 cut(s)	1998
Bse3DI	GCAATG	6 cut(s)	1209, 1653, 1758, 2141, 2790, 2879
BseBI	CCWGG	2 cut(s)	1881, 2705
BseDI	CCNNGG	4 cut(s)	925, 1017, 1083, 1326
BseGI	GGATG	8 cut(s)	921, 1098, 1352, 1699, 2105, 2238, 2287, 2340
BseLI	CCNNNNNNNGG	6 cut(s)	689, 1089, 1294, 1308, 2095, 2907
BseMI	GCAATG	6 cut(s)	1209, 1653, 1758, 2141, 2790, 2879
BseMII	CTCAG	4 cut(s)	45, 197, 1989, 2277
BseNI	ACTGG	5 cut(s)	121, 1145, 1656, 2176, 2994
BseRI	GAGGAG	3 cut(s)	233, 1805, 2015
BseSI	GKGCMC	2 cut(s)	1655, 2430
BseXI	GCAGC	9 cut(s)	278, 553, 1111, 1479, 1615, 1751, 2393, 2417, 2824
Bsh1285I	CGRYCG	1 cut(s)	15
BshFI	GGCC	7 cut(s)	1082, 1301, 1879, 2303, 2489, 2900, 2911
BshNI	GGYRCC	2 cut(s)	797, 2425
BsiEI	CGRYCG	1 cut(s)	15
BsiHKAI	GWGCWC	3 cut(s)	1655, 2485, 2700
BsiHKCI	CYCGRG	2 cut(s)	215, 1715
BsiSI	CCGG	3 cut(s)	795, 1008, 1401
BslFI	GGGAC	2 cut(s)	1958, 2772
BslI	CCNNNNNNNGG	6 cut(s)	689, 1089, 1294, 1308, 2095, 2907
BsmAI	GTCTC	4 cut(s)	338, 607, 991, 2225
BsmFI	GGGAC	2 cut(s)	1958, 2772
BsmI	GAATGC	1 cut(s)	2073
BsnI	GGCC	7 cut(s)	1082, 1301, 1879, 2303, 2489, 2900, 2911
Bso31I	GGTCTC	1 cut(s)	2225
BsoBI	CYCGRG	2 cut(s)	215, 1715
Bsp119I	TTCGAA	1 cut(s)	326
Bsp1286I	GDGCHC	5 cut(s)	1241, 1655, 2430, 2485, 2700
Bsp1407I	TGTACA	2 cut(s)	421, 2331
Bsp19I	CCATGG	1 cut(s)	925
BspACI	CCGC	2 cut(s)	282, 2897
BspANI	GGCC	7 cut(s)	1082, 1301, 1879, 2303, 2489, 2900, 2911
BspCNI	CTCAG	4 cut(s)	44, 196, 1990, 2276
BspLI	GGNNCC	6 cut(s)	799, 1751, 1803, 2427, 2550, 2579
BspMAI	CTGCAG	3 cut(s)	1108, 1633, 2814
BspOI	GCTAGC	1 cut(s)	935
BspPI	GGATC	5 cut(s)	1435, 1796, 1809, 1862, 2795
BspT104I	TTCGAA	1 cut(s)	326
BspT107I	GGYRCC	2 cut(s)	797, 2425
BspTNI	GGTCTC	1 cut(s)	2225
BsrDI	GCAATG	6 cut(s)	1209, 1653, 1758, 2141, 2790, 2879
BsrFI	RCCGGY	1 cut(s)	1400
BsrGI	TGTACA	2 cut(s)	421, 2331
BsrI	ACTGG	5 cut(s)	121, 1145, 1656, 2176, 2994
BssAI	RCCGGY	1 cut(s)	1400
BssECI	CCNNGG	4 cut(s)	925, 1017, 1083, 1326
BssT1I	CCWWGG	2 cut(s)	925, 1017
Bst2UI	CCWGG	2 cut(s)	1881, 2705
Bst4CI	ACNGT	7 cut(s)	16, 25, 155, 1907, 2015, 2308, 2371
Bst6I	CTCTTC	2 cut(s)	1175, 2055
BstAUI	TGTACA	2 cut(s)	421, 2331
BstBI	TTCGAA	1 cut(s)	326
BstC8I	GCNNGC	3 cut(s)	382, 919, 933
BstDEI	CTNAG	5 cut(s)	31, 183, 1364, 1998, 2263
BstDSI	CCRYGG	3 cut(s)	925, 1083, 1326
BstF5I	GGATG	8 cut(s)	921, 1098, 1352, 1699, 2105, 2238, 2287, 2340
BstH2I	RGCGCY	1 cut(s)	272
BstHHI	GCGC	1 cut(s)	271
BstMAI	GTCTC	4 cut(s)	338, 607, 991, 2225
BstMCI	CGRYCG	1 cut(s)	15
BstMWI	GCNNNNNNNGC	4 cut(s)	882, 1199, 2300, 2414
BstNI	CCWGG	2 cut(s)	1881, 2705
BstNSI	RCATGY	2 cut(s)	384, 1916
BstPAI	GACNNNNGTC	1 cut(s)	2217
BstSCI	CCNGG	2 cut(s)	1879, 2703
BstSFI	CTRYAG	3 cut(s)	1104, 1629, 2810
BstSLI	GKGCMC	2 cut(s)	1655, 2430
BstV1I	GCAGC	9 cut(s)	278, 553, 1111, 1479, 1615, 1751, 2393, 2417, 2824
BstV2I	GAAGAC	2 cut(s)	1352, 2701
BstX2I	RGATCY	3 cut(s)	1427, 1801, 1867
BstXI	CCANNNNNNTGG	1 cut(s)	2919
BstYI	RGATCY	3 cut(s)	1427, 1801, 1867
Bsu36I	CCTNAGG	1 cut(s)	1998
BsuI	GTATCC	1 cut(s)	1980
BsuRI	GGCC	7 cut(s)	1082, 1301, 1879, 2303, 2489, 2900, 2911
BtgI	CCRYGG	3 cut(s)	925, 1083, 1326
BtsCI	GGATG	8 cut(s)	921, 1098, 1352, 1699, 2105, 2238, 2287, 2340
BtsI	GCAGTG	2 cut(s)	892, 2172
BtsIMutI	CAGTG	9 cut(s)	21, 522, 892, 1257, 2020, 2172, 2241, 2304, 2367
Cac8I	GCNNGC	3 cut(s)	382, 919, 933
CaiI	CAGNNNCTG	3 cut(s)	521, 1430, 2171
CfoI	GCGC	1 cut(s)	271
Cfr10I	RCCGGY	1 cut(s)	1400
Cfr13I	GGNCC	1 cut(s)	2488
Csp6I	GTAC	5 cut(s)	422, 1613, 2332, 2599, 2666
CspCI	CAANNNNNGTGG	4 cut(s)	1101, 1136, 2432, 2467
CviQI	GTAC	5 cut(s)	422, 1613, 2332, 2599, 2666
DdeI	CTNAG	5 cut(s)	31, 183, 1364, 1998, 2263
DraIII	CACNNNGTG	1 cut(s)	2480
DrdI	GACNNNNNNGTC	1 cut(s)	1857
DriI	GACNNNNNGTC	1 cut(s)	562
DseDI	GACNNNNNNGTC	1 cut(s)	1857
EaeI	YGGCCR	6 cut(s)	1080, 1299, 1877, 2301, 2898, 2909
Eam1104I	CTCTTC	2 cut(s)	1175, 2055
Eam1105I	GACNNNNNGTC	1 cut(s)	562
EarI	CTCTTC	2 cut(s)	1175, 2055
Eco130I	CCWWGG	2 cut(s)	925, 1017
Eco24I	GRGCYC	1 cut(s)	1241
Eco31I	GGTCTC	1 cut(s)	2225
Eco47III	AGCGCT	1 cut(s)	270
Eco57I	CTGAAG	3 cut(s)	312, 2265, 2280
Eco81I	CCTNAGG	1 cut(s)	1998
Eco88I	CYCGRG	2 cut(s)	215, 1715
EcoRI	GAATTC	1 cut(s)	2717
EcoRII	CCWGG	2 cut(s)	1879, 2703
EcoT14I	CCWWGG	2 cut(s)	925, 1017
EcoT22I	ATGCAT	1 cut(s)	1760
EcoT38I	GRGCYC	1 cut(s)	1241
ErhI	CCWWGG	2 cut(s)	925, 1017
FalI	AAGNNNNNCTT	4 cut(s)	1455, 1487, 2414, 2446
FaqI	GGGAC	2 cut(s)	1958, 2772
FauNDI	CATATG	1 cut(s)	1497
FbaI	TGATCA	5 cut(s)	208, 1581, 1935, 2274, 2391
FblI	GTMKAC	4 cut(s)	723, 2079, 2655, 2935
FokI	GGATG	8 cut(s)	908, 1105, 1339, 1706, 2092, 2245, 2294, 2327
FriOI	GRGCYC	1 cut(s)	1241
FspBI	CTAG	6 cut(s)	111, 932, 962, 1413, 1643, 1743
GlaI	GCGC	1 cut(s)	270
GsuI	CTGGAG	3 cut(s)	1508, 1695, 2990
HaeII	RGCGCY	1 cut(s)	272
HaeIII	GGCC	7 cut(s)	1082, 1301, 1879, 2303, 2489, 2900, 2911
HapII	CCGG	3 cut(s)	795, 1008, 1401
HhaI	GCGC	1 cut(s)	271
Hin6I	GCGC	1 cut(s)	269
HinP1I	GCGC	1 cut(s)	269
HincII	GTYRAC	2 cut(s)	1910, 1924
HindII	GTYRAC	2 cut(s)	1910, 1924
HindIII	AAGCTT	2 cut(s)	2120, 2732
HinfI	GANTC	5 cut(s)	309, 728, 1372, 2527, 2628
HpaII	CCGG	3 cut(s)	795, 1008, 1401
Hpy188I	TCNGA	7 cut(s)	34, 145, 227, 1754, 2046, 2116, 2266
Hpy99I	CGWCG	1 cut(s)	845
HpyCH4III	ACNGT	7 cut(s)	16, 25, 155, 1907, 2015, 2308, 2371
HpyCH4IV	ACGT	2 cut(s)	2214, 2690
HpyF10VI	GCNNNNNNNGC	4 cut(s)	882, 1199, 2300, 2414
HpyF3I	CTNAG	5 cut(s)	31, 183, 1364, 1998, 2263
HpySE526I	ACGT	2 cut(s)	2214, 2690
HspAI	GCGC	1 cut(s)	269
Ksp22I	TGATCA	5 cut(s)	208, 1581, 1935, 2274, 2391
LmnI	GCTCC	9 cut(s)	448, 1050, 1489, 1625, 1755, 1792, 2046, 2197, 2548
Lsp1109I	GCAGC	9 cut(s)	278, 553, 1111, 1479, 1615, 1751, 2393, 2417, 2824
MaeI	CTAG	6 cut(s)	111, 932, 962, 1413, 1643, 1743
MaeII	ACGT	2 cut(s)	2214, 2690
MaeIII	GTNAC	8 cut(s)	16, 94, 749, 832, 1108, 1169, 1658, 2167
MfeI	CAATTG	1 cut(s)	1113
MflI	RGATCY	3 cut(s)	1427, 1801, 1867
MhlI	GDGCHC	5 cut(s)	1241, 1655, 2430, 2485, 2700
MlsI	TGGCCA	3 cut(s)	1301, 2303, 2911
MluNI	TGGCCA	3 cut(s)	1301, 2303, 2911
MlyI	GAGTC	1 cut(s)	303
MmeI	TCCRAC	3 cut(s)	449, 625, 2386
Mox20I	TGGCCA	3 cut(s)	1301, 2303, 2911
Mph1103I	ATGCAT	1 cut(s)	1760
MroXI	GAANNNNTTC	3 cut(s)	782, 1040, 2750
MscI	TGGCCA	3 cut(s)	1301, 2303, 2911
MseI	TTAA	8 cut(s)	48, 458, 662, 1065, 1863, 2432, 2685, 2998
MslI	CAYNNNNRTG	4 cut(s)	803, 1076, 1931, 2693
Msp20I	TGGCCA	3 cut(s)	1301, 2303, 2911
MspA1I	CMGCKG	2 cut(s)	686, 2815
MspI	CCGG	3 cut(s)	795, 1008, 1401
MspR9I	CCNGG	2 cut(s)	1881, 2705
MunI	CAATTG	1 cut(s)	1113
Mva1269I	GAATGC	1 cut(s)	2073
MvaI	CCWGG	2 cut(s)	1881, 2705
MwoI	GCNNNNNNNGC	4 cut(s)	882, 1199, 2300, 2414
NcoI	CCATGG	1 cut(s)	925
NdeI	CATATG	1 cut(s)	1497
NheI	GCTAGC	1 cut(s)	931
NlaIV	GGNNCC	6 cut(s)	799, 1751, 1803, 2427, 2550, 2579
NmuCI	GTSAC	4 cut(s)	94, 749, 832, 2167
NsiI	ATGCAT	1 cut(s)	1760
NspI	RCATGY	2 cut(s)	384, 1916
NspV	TTCGAA	1 cut(s)	326
OliI	CACNNNNGTG	2 cut(s)	803, 2693
PaeI	GCATGC	1 cut(s)	384
PaeR7I	CTCGAG	2 cut(s)	215, 1715
PctI	GAATGC	1 cut(s)	2073
PdmI	GAANNNNTTC	3 cut(s)	782, 1040, 2750
PfeI	GAWTC	4 cut(s)	728, 1372, 2527, 2628
PflFI	GACNNNGTC	1 cut(s)	755
PflMI	CCANNNNNTGG	3 cut(s)	689, 1308, 2907
PleI	GAGTC	1 cut(s)	303
PpsI	GAGTC	1 cut(s)	303
PshAI	GACNNNNGTC	1 cut(s)	2217
Psp6I	CCWGG	2 cut(s)	1879, 2703
PspGI	CCWGG	2 cut(s)	1879, 2703
PspN4I	GGNNCC	6 cut(s)	799, 1751, 1803, 2427, 2550, 2579
PspPI	GGNCC	1 cut(s)	2488
PspXI	VCTCGAGB	2 cut(s)	215, 1715
PsrI	GAACNNNNNNTAC	2 cut(s)	1093, 1125
PstI	CTGCAG	3 cut(s)	1108, 1633, 2814
PstNI	CAGNNNCTG	3 cut(s)	521, 1430, 2171
PsuI	RGATCY	3 cut(s)	1427, 1801, 1867
PsyI	GACNNNGTC	1 cut(s)	755
PvuII	CAGCTG	2 cut(s)	686, 2815
RsaI	GTAC	5 cut(s)	423, 1614, 2333, 2600, 2667
RsaNI	GTAC	5 cut(s)	422, 1613, 2332, 2599, 2666
RseI	CAYNNNNRTG	4 cut(s)	803, 1076, 1931, 2693
SaqAI	TTAA	8 cut(s)	48, 458, 662, 1065, 1863, 2432, 2685, 2998
Sau96I	GGNCC	1 cut(s)	2488
SchI	GAGTC	1 cut(s)	303
ScrFI	CCNGG	2 cut(s)	1881, 2705
SduI	GDGCHC	5 cut(s)	1241, 1655, 2430, 2485, 2700
SfcI	CTRYAG	3 cut(s)	1104, 1629, 2810
Sfr274I	CTCGAG	2 cut(s)	215, 1715
SfuI	TTCGAA	1 cut(s)	326
SlaI	CTCGAG	2 cut(s)	215, 1715
SmiMI	CAYNNNNRTG	4 cut(s)	803, 1076, 1931, 2693
SmlI	CTYRAG	5 cut(s)	215, 1715, 1991, 2589, 2735
SmoI	CTYRAG	5 cut(s)	215, 1715, 1991, 2589, 2735
SphI	GCATGC	1 cut(s)	384
SsiI	CCGC	2 cut(s)	282, 2897
SspI	AATATT	1 cut(s)	630
SspMI	CTAG	6 cut(s)	111, 932, 962, 1413, 1643, 1743
StyD4I	CCNGG	2 cut(s)	1879, 2703
StyI	CCWWGG	2 cut(s)	925, 1017
TaaI	ACNGT	7 cut(s)	16, 25, 155, 1907, 2015, 2308, 2371
TaiI	ACGT	2 cut(s)	2217, 2693
TaqI	TCGA	5 cut(s)	216, 312, 326, 759, 1716
TatI	WGTACW	4 cut(s)	421, 1612, 2331, 2665
TauI	GCSGC	1 cut(s)	2900
TfiI	GAWTC	4 cut(s)	728, 1372, 2527, 2628
Tru1I	TTAA	8 cut(s)	48, 458, 662, 1065, 1863, 2432, 2685, 2998
Tru9I	TTAA	8 cut(s)	48, 458, 662, 1065, 1863, 2432, 2685, 2998
TscAI	CASTG	9 cut(s)	28, 522, 892, 1264, 2020, 2172, 2248, 2304, 2374
TseFI	GTSAC	4 cut(s)	94, 749, 832, 2167
TseI	GCWGC	9 cut(s)	266, 541, 1124, 1492, 1628, 1739, 2381, 2405, 2812
Tsp45I	GTSAC	4 cut(s)	94, 749, 832, 2167
TspGWI	ACGGA	5 cut(s)	829, 1516, 2078, 2561, 2867
TspRI	CASTG	9 cut(s)	28, 522, 892, 1264, 2020, 2172, 2248, 2304, 2374
Tth111I	GACNNNGTC	1 cut(s)	755
Van91I	CCANNNNNTGG	3 cut(s)	689, 1308, 2907
VneI	GTGCAC	1 cut(s)	1651
XapI	RAATTY	2 cut(s)	1439, 2717
XbaI	TCTAGA	1 cut(s)	110
XceI	RCATGY	2 cut(s)	384, 1916
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1670
XhoI	CTCGAG	2 cut(s)	215, 1715
XmiI	GTMKAC	4 cut(s)	723, 2079, 2655, 2935
XmnI	GAANNNNTTC	3 cut(s)	782, 1040, 2750
XspI	CTAG	6 cut(s)	111, 932, 962, 1413, 1643, 1743
Zsp2I	ATGCAT	1 cut(s)	1760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.