RLG00000010041

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
62033662 .. 62035794
2133 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010041

Sequence Viewer

Length: 2019 bp
ATGATGGGCAAAATCAGCCAGGACACGAGTGAAAAGACGCCTCTACAAGCACGTCTAGACAAGCTAACTTCATCTATAGGTAAAGTTGGTTTGGCAGTTGCCTACTTAGTTCTTTCAGTCATGTTGGTTCGATACTTCACAAGGAATACCGTGGATGAGAATGGAAGCAAAATGTTCAATGGCAGCAAGACAAAAGTAGATGACATAATAAATGCTATCATTGGAATTGTAGCAGCTGCCGTTACAATTGTTGTAGTAGCAATTCCAGAAGGTCTGCCATTGGCTGTGACTCTCACTCTTGCTTATTCCTTGAAGAGAATGATGGCTGATAATGCAATGGTACGGAAGCTCTCTGCTTCTGAGCCCATGGGGTCTGCTACAACAATTTGTACAAACAAAACAGGGGTTGCTCTCAATACAACTGGTAGTGTGTACAGGCCTAGCTTGGATTCAAAAATTGAGACCTCTGGCAGTCCAACTGAAAAGGCTATTCTATCTTGGGCGGTTCATGATACAAAGATGGATATGGAGAAAGTGGTGAAGAGTTGTAGCATTCTCCATGTTGAGGCTTTCAATTCACAGACGAAACGTAGTGGGGTTTTGATTAAGACGAAGGCGGATAATACAGTCCAAGTACATTTTAAAGGAGCTGCAGAGATGATACTAGCAATGTGTACAAGTTACTATGATGCCTCTGGAATTGTTAAGGATATGGATTACAATGAAAAAATGAACTTTGAGCAGATTATTCAAGGTATGGCAGCCAGCAGCCTCAGATGCATCGCATTCCCACATAAAGAAGTTGCAGCAGAGGAGCAAGTTGAAGGACACCAGAAAGTTGCACTAAAGGAAGATGGTTTGACCCTATTGGGACTTGTAGGTCTTAAAGATCCATGTCATCCAGGAGTTAAGAAAGCAGTTAAAGACTGTGAATATGCAGGTGTGAACATCAAAATGAGCACTGGGGATAATGTTTACACTGCAAAAGCCATAGCTACTGAGTGTGGGATACTCAGGCCTGGTCAGGACATGCTCGGAGCAGTCATAGAAGGTGTCAAATTTCGCAACTACACTCCAGAACAGAGAATGGAGAAGGTTGAGGCTATATGTGTAATGGCGAGGTCTTCTCCTTTTGATAAGCTTCTGATGGTACAATGCTTGAAGCAGAAAGGTCATGTAGTTGCAGTGACAGGTGATGGAACCAATGATGCACCAGCATTGAAAGAAGCTGATATAGGACTTTCCATGGGGATTCAAGGCACAGAAGTTGCTAAAGAGAGCTCGGATATTGTGATCATGGATGATAACTTTGCTTCAGTTGCTACAGTTTTGATGTGGGGGAGATGTGTGTACAATAATATCCAGAAGTTCATCCAATTCCAGCTCACTGTCAATGTTGCAGCTCTTGTGATCAACTTTGTAGCCGCAGTTTCAGCAGGTCAAGTCCCATTAACAGCAGTTCAGTTATTGTGGGTGAACTTGATTATGGACACACTTGGAGCTCTTGCTCTTGCCACAGAAAAGCCCACAAAAGAACTCATGGAGAAGCCACCAGTGGGAAGGACAGCGCCTCTCATCACAAACGTCATGTGGAGGAACCTCTTGCCTCAAGCATTGTACCAGATAACAGTCCTCTTGATCTTGCAATTCAGGGGCAAAGCAATCTTTGGTGTCACTGATAAGGTAAAGGACACATTGATCTTCAACACTTTTGTGCTTTGCCAGGTTTTCAATGAGTTCAATGCGAGGAAGCTAGAGAAGAAGAATGTCTTCAAGGGAATACACACCAACAAGTTATTTATGGGAATCATTGCAGCAACAATTATTCTCCAAGTGGTGATGGTGGAGTTTCTTAAGAAATTTGCAGATACAGAGAGATTGAACTGGGGACAATGGGGTATATGCATTGGCATTGCAGTCATCTCTTGGCCAATTGGCCGGGTGTTCAAGTCAATACCTGTTCCAGAGAAATCCTTTCTCAGTTGTCTAAAGATGAAGAATTATAAGAGCAACATTTGA

Protein Analysis

673

Amino Acids

73.39

Weight (kDa)

8.96

Isoelectric Point (pI)

26.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase PF13246 135 - 301 4.8e-26 P-type ATPase, cytoplasmic domain N
Hydrolase PF00702 271 - 411 4.2e-11 haloacid dehalogenase-like hydrolase
Cation_ATPase_C PF00689 482 - 651 3.2e-48 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2004
AarI CACCTGC 1 cut(s) 929
AasI GACNNNNNNGTC 1 cut(s) 879
Acc36I ACCTGC 2 cut(s) 929, 1427
AciI CCGC 3 cut(s) 503, 617, 1425
AclWI GGATC 1 cut(s) 884
AcoI YGGCCR 2 cut(s) 1928, 1936
AcsI RAATTY 2 cut(s) 1058, 1859
AcuI CTGAAG 1 cut(s) 1299
AcyI GRCGYC 1 cut(s) 38
AfaI GTAC 8 cut(s) 342, 391, 434, 636, 676, 1152, 1352, 1619
AfiI CCNNNNNNNGG 2 cut(s) 565, 1556
AflII CTTAAG 1 cut(s) 1853
AjiI CACGTC 1 cut(s) 53
AjnI CCWGG 4 cut(s) 18, 901, 1018, 1722
AleI CACNNNNGTG 1 cut(s) 1712
Alw21I GWGCWC 3 cut(s) 962, 1283, 1504
Alw26I GTCTC 1 cut(s) 455
AlwI GGATC 1 cut(s) 884
AoxI GGCC 4 cut(s) 437, 1016, 1928, 1936
ApeKI GCWGC 9 cut(s) 183, 233, 236, 650, 761, 768, 806, 1400, 1814
ApoI RAATTY 2 cut(s) 1058, 1859
Asp700I GAANNNNTTC 1 cut(s) 1769
AspLEI GCGC 1 cut(s) 1570
AsuC2I CCSGG 1 cut(s) 1940
AsuHPI GGTGA 4 cut(s) 550, 1205, 1486, 1849
BalI TGGCCA 1 cut(s) 1930
BanII GRGCYC 3 cut(s) 366, 1283, 1504
BauI CACGAG 1 cut(s) 25
BbsI GAAGAC 2 cut(s) 1116, 1762
Bbv12I GWGCWC 3 cut(s) 962, 1283, 1504
BbvI GCAGC 9 cut(s) 195, 223, 245, 637, 773, 780, 818, 1412, 1826
BccI CCATC 6 cut(s) 316, 514, 848, 1141, 1190, 1834
BceAI ACGGC 1 cut(s) 224
BciT130I CCWGG 4 cut(s) 20, 903, 1020, 1724
BciVI GTATCC 1 cut(s) 1002
BclI TGATCA 2 cut(s) 1293, 1410
BcnI CCSGG 1 cut(s) 1940
BcoDI GTCTC 1 cut(s) 455
BfaI CTAG 4 cut(s) 56, 441, 665, 1754
BfmI CTRYAG 3 cut(s) 75, 651, 1323
BfoI RGCGCY 1 cut(s) 1571
BfrI CTTAAG 1 cut(s) 1853
BfuAI ACCTGC 2 cut(s) 929, 1427
BfuI GTATCC 1 cut(s) 1002
Bme1390I CCNGG 5 cut(s) 20, 903, 1020, 1724, 1940
BmgBI CACGTC 1 cut(s) 53
BmiI GGNNCC 2 cut(s) 1201, 1598
BmrFI CCNGG 5 cut(s) 20, 903, 1020, 1724, 1940
BmrI ACTGGG 2 cut(s) 972, 1894
BmsI GCATC 4 cut(s) 679, 767, 789, 1198
BmuI ACTGGG 2 cut(s) 972, 1894
BpiI GAAGAC 2 cut(s) 1116, 1762
BplI GAGNNNNNCTC 2 cut(s) 1111, 1143
BpmI CTGGAG 1 cut(s) 1059
BpuEI CTTGAG 1 cut(s) 1593
BpuMI CCSGG 1 cut(s) 1940
BsaHI GRCGYC 1 cut(s) 38
BsaI GGTCTC 1 cut(s) 455
BsaJI CCNNGG 3 cut(s) 150, 366, 1245
Bsc4I CCNNNNNNNGG 2 cut(s) 565, 1556
Bse1I ACTGG 4 cut(s) 427, 967, 1553, 1889
Bse3DI GCAATG 4 cut(s) 342, 675, 1809, 1911
BseBI CCWGG 4 cut(s) 20, 903, 1020, 1724
BseDI CCNNGG 3 cut(s) 150, 366, 1245
BseGI GGATG 4 cut(s) 160, 898, 1306, 1371
BseLI CCNNNNNNNGG 2 cut(s) 565, 1556
BseMI GCAATG 4 cut(s) 342, 675, 1809, 1911
BseMII CTCAG 5 cut(s) 351, 787, 990, 1027, 1993
BseNI ACTGG 4 cut(s) 427, 967, 1553, 1889
BseRI GAGGAG 1 cut(s) 827
BseXI GCAGC 9 cut(s) 195, 223, 245, 637, 773, 780, 818, 1412, 1826
BshFI GGCC 4 cut(s) 439, 1018, 1930, 1938
BsiHKAI GWGCWC 3 cut(s) 962, 1283, 1504
BsiSI CCGG 1 cut(s) 1939
BslFI GGGAC 3 cut(s) 885, 1430, 1902
BslI CCNNNNNNNGG 2 cut(s) 565, 1556
BsmAI GTCTC 1 cut(s) 455
BsmFI GGGAC 3 cut(s) 885, 1430, 1902
BsmI GAATGC 2 cut(s) 552, 785
BsnI GGCC 4 cut(s) 439, 1018, 1930, 1938
Bso31I GGTCTC 1 cut(s) 455
Bsp1286I GDGCHC 4 cut(s) 366, 962, 1283, 1504
Bsp1407I TGTACA 4 cut(s) 389, 432, 674, 1350
Bsp143I GATC 5 cut(s) 889, 1293, 1410, 1638, 1698
Bsp19I CCATGG 2 cut(s) 366, 1245
BspACI CCGC 3 cut(s) 503, 617, 1425
BspANI GGCC 4 cut(s) 439, 1018, 1930, 1938
BspCNI CTCAG 5 cut(s) 352, 786, 991, 1026, 1992
BspHI TCATGA 1 cut(s) 508
BspLI GGNNCC 2 cut(s) 1201, 1598
BspMAI CTGCAG 1 cut(s) 655
BspMI ACCTGC 2 cut(s) 929, 1427
BspPI GGATC 1 cut(s) 884
BspTI CTTAAG 1 cut(s) 1853
BspTNI GGTCTC 1 cut(s) 455
BsrDI GCAATG 4 cut(s) 342, 675, 1809, 1911
BsrGI TGTACA 4 cut(s) 389, 432, 674, 1350
BsrI ACTGG 4 cut(s) 427, 967, 1553, 1889
BssECI CCNNGG 3 cut(s) 150, 366, 1245
BssMI GATC 5 cut(s) 889, 1293, 1410, 1638, 1698
BssNI GRCGYC 1 cut(s) 38
BssSI CACGAG 1 cut(s) 25
BssT1I CCWWGG 2 cut(s) 366, 1245
Bst2BI CACGAG 1 cut(s) 25
Bst2UI CCWGG 4 cut(s) 20, 903, 1020, 1724
Bst4CI ACNGT 6 cut(s) 151, 628, 929, 1327, 1390, 1630
Bst6I CTCTTC 2 cut(s) 308, 536
BstACI GRCGYC 1 cut(s) 38
BstAFI CTTAAG 1 cut(s) 1853
BstAUI TGTACA 4 cut(s) 389, 432, 674, 1350
BstC8I GCNNGC 1 cut(s) 766
BstDEI CTNAG 6 cut(s) 106, 360, 773, 999, 1013, 1979
BstDSI CCRYGG 3 cut(s) 150, 366, 1245
BstF5I GGATG 4 cut(s) 160, 898, 1306, 1371
BstH2I RGCGCY 1 cut(s) 1571
BstHHI GCGC 1 cut(s) 1570
BstKTI GATC 5 cut(s) 892, 1296, 1413, 1641, 1701
BstMAI GTCTC 1 cut(s) 455
BstMBI GATC 5 cut(s) 889, 1293, 1410, 1638, 1698
BstMWI GCNNNNNNNGC 5 cut(s) 15, 332, 777, 1319, 1433
BstNI CCWGG 4 cut(s) 20, 903, 1020, 1724
BstNSI RCATGY 1 cut(s) 1033
BstSCI CCNGG 5 cut(s) 18, 901, 1018, 1722, 1938
BstSFI CTRYAG 3 cut(s) 75, 651, 1323
BstV1I GCAGC 9 cut(s) 195, 223, 245, 637, 773, 780, 818, 1412, 1826
BstV2I GAAGAC 2 cut(s) 1116, 1762
BstX2I RGATCY 1 cut(s) 889
BstYI RGATCY 1 cut(s) 889
BsuI GTATCC 1 cut(s) 1002
BsuRI GGCC 4 cut(s) 439, 1018, 1930, 1938
BtgI CCRYGG 3 cut(s) 150, 366, 1245
BtgZI GCGATG 1 cut(s) 766
BtrI CACGTC 1 cut(s) 53
BtsCI GGATG 4 cut(s) 160, 898, 1306, 1371
BtsI GCAGTG 2 cut(s) 978, 1191
BtsIMutI CAGTG 6 cut(s) 960, 978, 1191, 1386, 1560, 1674
BveI ACCTGC 2 cut(s) 929, 1427
Cac8I GCNNGC 1 cut(s) 766
CciI TCATGA 1 cut(s) 508
CfoI GCGC 1 cut(s) 1570
CseI GACGC 1 cut(s) 46
Csp6I GTAC 8 cut(s) 341, 390, 433, 635, 675, 1151, 1351, 1618
CviQI GTAC 8 cut(s) 341, 390, 433, 635, 675, 1151, 1351, 1618
DdeI CTNAG 6 cut(s) 106, 360, 773, 999, 1013, 1979
DpnI GATC 5 cut(s) 891, 1295, 1412, 1640, 1700
DpnII GATC 5 cut(s) 889, 1293, 1410, 1638, 1698
DraI TTTAAA 1 cut(s) 643
DrdI GACNNNNNNGTC 1 cut(s) 879
DseDI GACNNNNNNGTC 1 cut(s) 879
EaeI YGGCCR 2 cut(s) 1928, 1936
Eam1104I CTCTTC 2 cut(s) 308, 536
EarI CTCTTC 2 cut(s) 308, 536
EciI GGCGGA 1 cut(s) 632
Ecl136II GAGCTC 2 cut(s) 1281, 1502
Eco130I CCWWGG 2 cut(s) 366, 1245
Eco147I AGGCCT 2 cut(s) 439, 1018
Eco24I GRGCYC 3 cut(s) 366, 1283, 1504
Eco31I GGTCTC 1 cut(s) 455
Eco53kI GAGCTC 2 cut(s) 1281, 1502
Eco57I CTGAAG 1 cut(s) 1299
EcoICRI GAGCTC 2 cut(s) 1281, 1502
EcoRII CCWGG 4 cut(s) 18, 901, 1018, 1722
EcoT14I CCWWGG 2 cut(s) 366, 1245
EcoT22I ATGCAT 2 cut(s) 782, 1907
EcoT38I GRGCYC 3 cut(s) 366, 1283, 1504
ErhI CCWWGG 2 cut(s) 366, 1245
FalI AAGNNNNNCTT 2 cut(s) 1754, 1786
FaqI GGGAC 3 cut(s) 885, 1430, 1902
FbaI TGATCA 2 cut(s) 1293, 1410
FokI GGATG 4 cut(s) 167, 885, 1313, 1358
FriOI GRGCYC 3 cut(s) 366, 1283, 1504
FspBI CTAG 4 cut(s) 56, 441, 665, 1754
GlaI GCGC 1 cut(s) 1569
GsuI CTGGAG 1 cut(s) 1059
HaeII RGCGCY 1 cut(s) 1571
HaeIII GGCC 4 cut(s) 439, 1018, 1930, 1938
HapII CCGG 1 cut(s) 1939
HgaI GACGC 1 cut(s) 46
HhaI GCGC 1 cut(s) 1570
Hin1I GRCGYC 1 cut(s) 38
Hin6I GCGC 1 cut(s) 1568
HinP1I GCGC 1 cut(s) 1568
HindIII AAGCTT 1 cut(s) 1139
HinfI GANTC 4 cut(s) 289, 449, 1252, 1806
HpaII CCGG 1 cut(s) 1939
HphI GGTGA 4 cut(s) 550, 1205, 1486, 1849
Hpy166II GTNNAC 6 cut(s) 433, 675, 946, 976, 1351, 1477
Hpy188I TCNGA 5 cut(s) 361, 776, 1037, 1146, 1285
Hpy188III TCNNGA 9 cut(s) 56, 266, 509, 696, 1025, 1076, 1363, 1636, 1964
Hpy8I GTNNAC 6 cut(s) 433, 675, 946, 976, 1351, 1477
HpyAV CCTTC 6 cut(s) 263, 607, 818, 1043, 1087, 1554
HpyCH4III ACNGT 6 cut(s) 151, 628, 929, 1327, 1390, 1630
HpyCH4IV ACGT 3 cut(s) 52, 589, 1584
HpyF10VI GCNNNNNNNGC 5 cut(s) 15, 332, 777, 1319, 1433
HpyF3I CTNAG 6 cut(s) 106, 360, 773, 999, 1013, 1979
HpySE526I ACGT 3 cut(s) 52, 589, 1584
Hsp92I GRCGYC 1 cut(s) 38
HspAI GCGC 1 cut(s) 1568
Ksp22I TGATCA 2 cut(s) 1293, 1410
Kzo9I GATC 5 cut(s) 889, 1293, 1410, 1638, 1698
LmnI GCTCC 4 cut(s) 647, 814, 1037, 1499
Lsp1109I GCAGC 9 cut(s) 195, 223, 245, 637, 773, 780, 818, 1412, 1826
LweI GCATC 4 cut(s) 679, 767, 789, 1198
MaeI CTAG 4 cut(s) 56, 441, 665, 1754
MaeII ACGT 3 cut(s) 52, 589, 1584
MaeIII GTNAC 5 cut(s) 241, 286, 680, 1186, 1672
MalI GATC 5 cut(s) 891, 1295, 1412, 1640, 1700
MboI GATC 5 cut(s) 889, 1293, 1410, 1638, 1698
MboII GAAGA 9 cut(s) 325, 553, 863, 1116, 1693, 1762, 1771, 1774, 2008
MfeI CAATTG 2 cut(s) 246, 1932
MflI RGATCY 1 cut(s) 889
MhlI GDGCHC 4 cut(s) 366, 962, 1283, 1504
MlsI TGGCCA 1 cut(s) 1930
MluNI TGGCCA 1 cut(s) 1930
MlyI GAGTC 1 cut(s) 283
MmeI TCCRAC 1 cut(s) 500
Mox20I TGGCCA 1 cut(s) 1930
Mph1103I ATGCAT 2 cut(s) 782, 1907
MroXI GAANNNNTTC 1 cut(s) 1769
MscI TGGCCA 1 cut(s) 1930
MseI TTAA 8 cut(s) 606, 642, 705, 885, 909, 921, 1451, 1854
MslI CAYNNNNRTG 2 cut(s) 953, 1712
Msp20I TGGCCA 1 cut(s) 1930
MspA1I CMGCKG 1 cut(s) 236
MspCI CTTAAG 1 cut(s) 1853
MspI CCGG 1 cut(s) 1939
MspR9I CCNGG 5 cut(s) 20, 903, 1020, 1724, 1940
MunI CAATTG 2 cut(s) 246, 1932
Mva1269I GAATGC 2 cut(s) 552, 785
MvaI CCWGG 4 cut(s) 20, 903, 1020, 1724
MwoI GCNNNNNNNGC 5 cut(s) 15, 332, 777, 1319, 1433
NciI CCSGG 1 cut(s) 1940
NcoI CCATGG 2 cut(s) 366, 1245
NdeII GATC 5 cut(s) 889, 1293, 1410, 1638, 1698
NlaIV GGNNCC 2 cut(s) 1201, 1598
NmuCI GTSAC 3 cut(s) 286, 1186, 1672
NsiI ATGCAT 2 cut(s) 782, 1907
NspI RCATGY 1 cut(s) 1033
OliI CACNNNNGTG 1 cut(s) 1712
PagI TCATGA 1 cut(s) 508
PaqCI CACCTGC 1 cut(s) 929
PceI AGGCCT 2 cut(s) 439, 1018
PctI GAATGC 2 cut(s) 552, 785
PdmI GAANNNNTTC 1 cut(s) 1769
PfeI GAWTC 3 cut(s) 449, 1252, 1806
PfoI TCCNGGA 1 cut(s) 901
PleI GAGTC 1 cut(s) 283
PpsI GAGTC 1 cut(s) 283
PsiI TTATAA 1 cut(s) 2004
Psp124BI GAGCTC 2 cut(s) 1283, 1504
Psp6I CCWGG 4 cut(s) 18, 901, 1018, 1722
PspGI CCWGG 4 cut(s) 18, 901, 1018, 1722
PspN4I GGNNCC 2 cut(s) 1201, 1598
PstI CTGCAG 1 cut(s) 655
PsuI RGATCY 1 cut(s) 889
PvuII CAGCTG 1 cut(s) 236
RsaI GTAC 8 cut(s) 342, 391, 434, 636, 676, 1152, 1352, 1619
RsaNI GTAC 8 cut(s) 341, 390, 433, 635, 675, 1151, 1351, 1618
RseI CAYNNNNRTG 2 cut(s) 953, 1712
SacI GAGCTC 2 cut(s) 1283, 1504
SaqAI TTAA 8 cut(s) 606, 642, 705, 885, 909, 921, 1451, 1854
Sau3AI GATC 5 cut(s) 889, 1293, 1410, 1638, 1698
SchI GAGTC 1 cut(s) 283
ScrFI CCNGG 5 cut(s) 20, 903, 1020, 1724, 1940
SduI GDGCHC 4 cut(s) 366, 962, 1283, 1504
SfaNI GCATC 4 cut(s) 679, 767, 789, 1198
SfcI CTRYAG 3 cut(s) 75, 651, 1323
SmiMI CAYNNNNRTG 2 cut(s) 953, 1712
SmlI CTYRAG 2 cut(s) 1608, 1853
SmoI CTYRAG 2 cut(s) 1608, 1853
SseBI AGGCCT 2 cut(s) 439, 1018
SsiI CCGC 3 cut(s) 503, 617, 1425
SspMI CTAG 4 cut(s) 56, 441, 665, 1754
SstI GAGCTC 2 cut(s) 1283, 1504
StuI AGGCCT 2 cut(s) 439, 1018
StyD4I CCNGG 5 cut(s) 18, 901, 1018, 1722, 1938
StyI CCWWGG 2 cut(s) 366, 1245
TaaI ACNGT 6 cut(s) 151, 628, 929, 1327, 1390, 1630
TaiI ACGT 3 cut(s) 55, 592, 1587
TaqI TCGA 1 cut(s) 130
TatI WGTACW 5 cut(s) 389, 432, 634, 674, 1350
TauI GCSGC 1 cut(s) 1427
TfiI GAWTC 3 cut(s) 449, 1252, 1806
Tru1I TTAA 8 cut(s) 606, 642, 705, 885, 909, 921, 1451, 1854
Tru9I TTAA 8 cut(s) 606, 642, 705, 885, 909, 921, 1451, 1854
TscAI CASTG 6 cut(s) 967, 985, 1191, 1393, 1560, 1681
TseFI GTSAC 3 cut(s) 286, 1186, 1672
TseI GCWGC 9 cut(s) 183, 233, 236, 650, 761, 768, 806, 1400, 1814
Tsp45I GTSAC 3 cut(s) 286, 1186, 1672
TspDTI ATGAA 6 cut(s) 60, 497, 738, 746, 1360, 2009
TspGWI ACGGA 1 cut(s) 358
TspRI CASTG 6 cut(s) 967, 985, 1191, 1393, 1560, 1681
Vha464I CTTAAG 1 cut(s) 1853
XapI RAATTY 2 cut(s) 1058, 1859
XbaI TCTAGA 1 cut(s) 55
XceI RCATGY 1 cut(s) 1033
XmnI GAANNNNTTC 1 cut(s) 1769
XspI CTAG 4 cut(s) 56, 441, 665, 1754
Zsp2I ATGCAT 2 cut(s) 782, 1907
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.