Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000533.1

Orthogroup ID

OG0000174

Physical Location & Seq

Genomic Coordinates Forward (+)

279874 .. 283217

Gene Structure 3344 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000533.1_g000082.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2862 bp

atgtctgaattagtctcaaactctggtcattttcggcttcagaaaaatctagacacaagcccaacctattttgacacgcttgtgaagaacaaagatcttgcccaactgcaacacttgggaggggttgaaggagtagcattacatctcaaatctgatcaagagcatggaattccttgcgatgatgctgaggacattcccaacagaatcaaaaaattcggttcaaacgtttacagaaaagcccccaaaggaggttttttccattttgtgtgggaagccttcaaagacccaacaatactaatcctcttaggctgtgcggcactttctcttggttttgacatcaatgaacatggattcaaagaaggttgtactgatggtggaaccatattgctcgcagtcattcaaatcatttccgtgtctgcagtaagcgattacaagcagagcagacctttggtccgtaacaatatccaaattgaggcgtgcagaggtggcaggaggcaaaagatttctgtttttgaaactgtggttggggatgtaattctcttgaacattggagatcgggtgccggctgatggattacttgtacaagggcattccttgcaagtagacgaatcaagcatgacaggaactgatagccctgttgaaattagccaccatcagaatcccttccttttttctgggacaaaaatcacacatggatatggtcgaatgcttgtcacatccgttgggatgaacacaacgtggggtgagaggatgagccaaatgaggcaagactccactgaaaagacacctctgcaagaacgtctagagaagctaaattcgttaataggtaaagtagctttgctagttgctttccttgttcttgtagtcttgttagttcgatacttcacggggaataccaaggataagaatggaaacaaggagttcaatggcagcaacacagcagtagatgacataataagcgctgtcattgggattgtagcggctgcggtttccattgttgtggtggcaattccagaaggtctctcattatcactaattcttggtgttgcctattccaagaagataatgatggctgacaaagcaatggatctgaagctctctgcttgtgagaccatgggatcggttaccacaatttgcactgacaaaacaggtactcttacaacgaatcagatggaggtgacccagttttggttaggtaaatattctttagaagaagaagcttattcgtcagagatttctccttctgttcttcatttgatccaagaaggagttgctctgaatacaactggtagtgtgcacaagcaaagtttggattcaaaagtagaaatctcaggcagtccaactgaaaaggctattatttcatggggggtatataagttgcagatggatatggaggaagtaatgaagagttgtagcattctccatgttgaggcctttgattcgcagaatatgagaagtggggtttcaatgaagaggaacgcagacagcacagttcatttacattggaaaggagctccagagatgatactggaaatgtgttcaagttactacactccctctggactcgttaaaggtatggatgacagtgaaaaaaagagttttgaggagattattcaaggtatgcaagctagcagactccggtgtattgcgtttgcacataaagaagttccagcagatcaagaccacacaactaaggtaaaagaagatggattgaccttgctgggactcgtaggtcttaaagatccatgccgtccagaagcgaagaaagcagttgaagaatgtcaatatgcaggggtgaacgtcaaaatgattacaggcgacaatattttcactgctaaagccatagccacagaatgtgggatactcaagcccggtcatgacatcttcagtggagcagtgataaatggtgaggaatttcgaagctacaccgacgaggagagaatgttgaagctagacaatatcagtgtaatggcacggtcttctgctgatgataagcttctaatggtgcgatgcttgaagcagaaaggtcatgtagttgcagtgactggtcatggcgctactgatgcaccagcactggaagaagctgatataggactatctatgggaattcaaggaacagaagttgccaaagaaagctcagatattataatcacagatgataactttgcatcagtggtcagtgttttggcgtgtggaagatgtgtttatcacaacacgcagaagctcgtccagttccagctcacagcaaatgttgctggtcttttgatcaactctgcagcagcagcttcatcaaggcaagtcccattttcgatagttcgttcaatttggttgaacatgattatggacacactactagctctggctcttaccaaggagaaacccacaaaagaactcatggaaaagcaaccggtgggcagaactgagcccttcatcaccaatgtcatgtgcaggaacctcacggctcaagctctgtaccagacaaccgtcctcttgatattacagttcaggggaaaagcaatgtttggtgttaatgataaggtaaatggcaccttgatctttaatacttatgtgttttgccagatgttcaatgagttcaatgcaaggaagcttgagaagaaggatatatttaggaatatccacaccgacaaattgttcatggggataattgcagtggcagttattctacagattgcgacggtggaatttctaagcaaatttgaagatatagagaggttgaactacagactatggggagtacgtcttggaaccgcagccatttcttggcccatcggttgggttgttaagtgtatacctgtgccacagaaacccattttccactacctgaagatgaagatgaactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

953

Amino Acids

104.84

Weight (kDa)

6.39

Isoelectric Point (pI)

36.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22910
fragaria_vesca	FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica	MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica	Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis	pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis	RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata	RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora	Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa	Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha	Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana	Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2147
AasI	GACNNNNNNGTC	1 cut(s)	1731
AccB1I	GGYRCC	2 cut(s)	559, 2546
AccB7I	CCANNNNNTGG	2 cut(s)	2781, 2793
AccI	GTMKAC	2 cut(s)	603, 2809
AciI	CCGC	4 cut(s)	314, 980, 986, 2769
AclI	AACGTT	1 cut(s)	225
AclWI	GGATC	4 cut(s)	1095, 1126, 1252, 1736
AcsI	RAATTY	7 cut(s)	168, 212, 814, 1913, 2106, 2702, 2714
AcuI	CTGAAG	3 cut(s)	23, 1112, 1870
AdeI	CACNNNGTG	1 cut(s)	738
AfaI	GTAC	5 cut(s)	367, 582, 1153, 2474, 2757
AfeI	AGCGCT	1 cut(s)	961
AfiI	CCNNNNNNNGG	7 cut(s)	248, 472, 569, 1188, 1429, 2781, 2793
AgeI	ACCGGT	1 cut(s)	2407
AhdI	GACNNNNNGTC	1 cut(s)	449
AjuI	GAANNNNNNNTTGG	2 cut(s)	507, 539
AleI	CACNNNNGTG	1 cut(s)	80
Alw21I	GWGCWC	2 cut(s)	1299, 1516
Alw26I	GTCTC	3 cut(s)	19, 1025, 1103
Alw44I	GTGCAC	1 cut(s)	1295
AlwI	GGATC	4 cut(s)	1095, 1126, 1252, 1736
AlwNI	CAGNNNCTG	2 cut(s)	626, 2045
Aor51HI	AGCGCT	1 cut(s)	961
AoxI	GGCC	2 cut(s)	1431, 2783
ApaLI	GTGCAC	1 cut(s)	1295
ApeKI	GCWGC	6 cut(s)	930, 983, 2276, 2279, 2282, 2771
ApoI	RAATTY	7 cut(s)	168, 212, 814, 1913, 2106, 2702, 2714
AsiGI	ACCGGT	1 cut(s)	2407
Asp700I	GAANNNNTTC	1 cut(s)	662
AspLEI	GCGC	2 cut(s)	962, 2057
AspS9I	GGNCC	2 cut(s)	451, 2784
AsuC2I	CCSGG	1 cut(s)	1872
AsuHPI	GGTGA	5 cut(s)	755, 1189, 1807, 1919, 2425
AsuII	TTCGAA	1 cut(s)	1918
AsuNHI	GCTAGC	1 cut(s)	1628
AvaII	GGWCC	1 cut(s)	451
BaeGI	GKGCMC	1 cut(s)	1299
BanI	GGYRCC	2 cut(s)	559, 2546
BanII	GRGCYC	2 cut(s)	1516, 2427
BbsI	GAAGAC	1 cut(s)	1971
Bbv12I	GWGCWC	2 cut(s)	1299, 1516
BbvCI	CCTCAGC	1 cut(s)	186
BbvI	GCAGC	6 cut(s)	942, 970, 2288, 2291, 2294, 2783
BccI	CCATC	8 cut(s)	365, 563, 660, 1063, 1165, 1378, 1700, 2795
BceAI	ACGGC	2 cut(s)	1734, 2475
BciVI	GTATCC	1 cut(s)	1854
BclI	TGATCA	2 cut(s)	154, 2265
BcnI	CCSGG	1 cut(s)	1872
BcoDI	GTCTC	3 cut(s)	19, 1025, 1103
BfaI	CTAG	6 cut(s)	50, 803, 842, 1629, 1952, 2354
BfmI	CTRYAG	4 cut(s)	417, 2274, 2684, 2740
BfoI	RGCGCY	2 cut(s)	963, 2058
BfuI	GTATCC	1 cut(s)	1854
BglII	AGATCT	1 cut(s)	94
BisI	GCNGC	8 cut(s)	315, 931, 981, 984, 2277, 2280, 2283, 2772
BlsI	GCNGC	8 cut(s)	316, 932, 982, 985, 2278, 2281, 2284, 2773
Bme1390I	CCNGG	1 cut(s)	1872
Bme18I	GGWCC	1 cut(s)	451
BmeRI	GACNNNNNGTC	1 cut(s)	449
BmgT120I	GGNCC	2 cut(s)	451, 2784
BmiI	GGNNCC	5 cut(s)	379, 561, 2453, 2548, 2767
BmrFI	CCNGG	1 cut(s)	1872
BmrI	ACTGGG	1 cut(s)	1177
BmsI	GCATC	4 cut(s)	172, 2000, 2053, 2177
BmtI	GCTAGC	1 cut(s)	1632
BmuI	ACTGGG	1 cut(s)	1177
BoxI	GACNNNNGTC	1 cut(s)	2483
BpiI	GAAGAC	1 cut(s)	1971
BpmI	CTGGAG	1 cut(s)	1500
Bpu10I	CCTNAGC	1 cut(s)	186
Bpu14I	TTCGAA	1 cut(s)	1918
BpuEI	CTTGAG	3 cut(s)	1850, 2448, 2630
BpuMI	CCSGG	1 cut(s)	1872
BsaI	GGTCTC	2 cut(s)	1025, 1103
BsaJI	CCNNGG	3 cut(s)	897, 1113, 2370
BsaWI	WCCGGW	2 cut(s)	1638, 2407
BsaXI	ACNNNNNCTCC	4 cut(s)	543, 573, 1928, 1958
Bsc4I	CCNNNNNNNGG	7 cut(s)	248, 472, 569, 1188, 1429, 2781, 2793
Bse118I	RCCGGY	2 cut(s)	562, 2407
Bse1I	ACTGG	6 cut(s)	1183, 1291, 1533, 2050, 2079, 2230
Bse3DI	GCAATG	2 cut(s)	1089, 2523
BseDI	CCNNGG	3 cut(s)	897, 1113, 2370
BseGI	GGATG	5 cut(s)	535, 716, 732, 756, 1585
BseLI	CCNNNNNNNGG	7 cut(s)	248, 472, 569, 1188, 1429, 2781, 2793
BseMI	GCAATG	2 cut(s)	1089, 2523
BseMII	CTCAG	4 cut(s)	177, 1344, 2151, 2412
BseNI	ACTGG	6 cut(s)	1183, 1291, 1533, 2050, 2079, 2230
BseRI	GAGGAG	2 cut(s)	1619, 1949
BseSI	GKGCMC	1 cut(s)	1299
BseXI	GCAGC	6 cut(s)	942, 970, 2288, 2291, 2294, 2783
BseYI	CCCAGC	1 cut(s)	1720
BsgI	GTGCAG	2 cut(s)	499, 2467
BshFI	GGCC	2 cut(s)	1433, 2785
BshNI	GGYRCC	2 cut(s)	559, 2546
BshTI	ACCGGT	1 cut(s)	2407
BsiHKAI	GWGCWC	2 cut(s)	1299, 1516
BsiSI	CCGG	4 cut(s)	563, 1639, 1872, 2408
BslFI	GGGAC	3 cut(s)	691, 1737, 2285
BslI	CCNNNNNNNGG	7 cut(s)	248, 472, 569, 1188, 1429, 2781, 2793
BsmAI	GTCTC	3 cut(s)	19, 1025, 1103
BsmFI	GGGAC	3 cut(s)	691, 1737, 2285
BsmI	GAATGC	3 cut(s)	589, 711, 1416
BsnI	GGCC	2 cut(s)	1433, 2785
Bso31I	GGTCTC	2 cut(s)	1025, 1103
Bsp119I	TTCGAA	1 cut(s)	1918
Bsp1286I	GDGCHC	3 cut(s)	1299, 1516, 2427
Bsp1407I	TGTACA	1 cut(s)	580
Bsp19I	CCATGG	1 cut(s)	1113
BspACI	CCGC	4 cut(s)	314, 980, 986, 2769
BspANI	GGCC	2 cut(s)	1433, 2785
BspCNI	CTCAG	4 cut(s)	178, 1343, 2150, 2413
BspHI	TCATGA	1 cut(s)	1876
BspLI	GGNNCC	5 cut(s)	379, 561, 2453, 2548, 2767
BspMAI	CTGCAG	2 cut(s)	421, 2278
BspOI	GCTAGC	1 cut(s)	1632
BspPI	GGATC	4 cut(s)	1095, 1126, 1252, 1736
BspT104I	TTCGAA	1 cut(s)	1918
BspT107I	GGYRCC	2 cut(s)	559, 2546
BspTNI	GGTCTC	2 cut(s)	1025, 1103
BsrDI	GCAATG	2 cut(s)	1089, 2523
BsrFI	RCCGGY	2 cut(s)	562, 2407
BsrGI	TGTACA	1 cut(s)	580
BsrI	ACTGG	6 cut(s)	1183, 1291, 1533, 2050, 2079, 2230
BssAI	RCCGGY	2 cut(s)	562, 2407
BssECI	CCNNGG	3 cut(s)	897, 1113, 2370
BssNAI	GTATAC	1 cut(s)	2810
BssT1I	CCWWGG	3 cut(s)	897, 1113, 2370
Bst1107I	GTATAC	1 cut(s)	2810
Bst4CI	ACNGT	7 cut(s)	520, 1492, 1586, 1977, 2485, 2502, 2698
Bst6I	CTCTTC	2 cut(s)	1400, 1466
BstAPI	GCANNNNNTGC	2 cut(s)	595, 2252
BstAUI	TGTACA	1 cut(s)	580
BstBI	TTCGAA	1 cut(s)	1918
BstC8I	GCNNGC	5 cut(s)	390, 478, 564, 1626, 1630
BstDEI	CTNAG	7 cut(s)	186, 304, 1330, 1692, 2137, 2421, 2708
BstDSI	CCRYGG	1 cut(s)	1113
BstEII	GGTNACC	2 cut(s)	1123, 1177
BstF5I	GGATG	5 cut(s)	535, 716, 732, 756, 1585
BstH2I	RGCGCY	2 cut(s)	963, 2058
BstHHI	GCGC	2 cut(s)	962, 2057
BstMAI	GTCTC	3 cut(s)	19, 1025, 1103
BstMWI	GCNNNNNNNGC	7 cut(s)	486, 595, 1079, 1766, 2063, 2252, 2282
BstPAI	GACNNNNGTC	1 cut(s)	2483
BstPI	GGTNACC	2 cut(s)	1123, 1177
BstSCI	CCNGG	1 cut(s)	1870
BstSFI	CTRYAG	4 cut(s)	417, 2274, 2684, 2740
BstSLI	GKGCMC	1 cut(s)	1299
BstV1I	GCAGC	6 cut(s)	942, 970, 2288, 2291, 2294, 2783
BstV2I	GAAGAC	1 cut(s)	1971
BstX2I	RGATCY	3 cut(s)	94, 1087, 1741
BstXI	CCANNNNNNTGG	1 cut(s)	1000
BstYI	RGATCY	3 cut(s)	94, 1087, 1741
BstZ17I	GTATAC	1 cut(s)	2810
BsuI	GTATCC	1 cut(s)	1854
BsuRI	GGCC	2 cut(s)	1433, 2785
BtgI	CCRYGG	1 cut(s)	1113
BtgZI	GCGATG	2 cut(s)	192, 2023
BtsCI	GGATG	5 cut(s)	535, 716, 732, 756, 1585
BtsI	GCAGTG	4 cut(s)	1830, 1902, 2046, 2676
Cac8I	GCNNGC	5 cut(s)	390, 478, 564, 1626, 1630
CaiI	CAGNNNCTG	2 cut(s)	626, 2045
CciI	TCATGA	1 cut(s)	1876
CfoI	GCGC	2 cut(s)	962, 2057
Cfr10I	RCCGGY	2 cut(s)	562, 2407
Cfr13I	GGNCC	2 cut(s)	451, 2784
Csp6I	GTAC	5 cut(s)	366, 581, 1152, 2473, 2756
CspAI	ACCGGT	1 cut(s)	2407
CviQI	GTAC	5 cut(s)	366, 581, 1152, 2473, 2756
DdeI	CTNAG	7 cut(s)	186, 304, 1330, 1692, 2137, 2421, 2708
DraIII	CACNNNGTG	1 cut(s)	738
DrdI	GACNNNNNNGTC	1 cut(s)	1731
DriI	GACNNNNNGTC	1 cut(s)	449
DseDI	GACNNNNNNGTC	1 cut(s)	1731
Eam1104I	CTCTTC	2 cut(s)	1400, 1466
Eam1105I	GACNNNNNGTC	1 cut(s)	449
EarI	CTCTTC	2 cut(s)	1400, 1466
Ecl136II	GAGCTC	1 cut(s)	1514
Eco130I	CCWWGG	3 cut(s)	897, 1113, 2370
Eco147I	AGGCCT	1 cut(s)	1433
Eco24I	GRGCYC	2 cut(s)	1516, 2427
Eco31I	GGTCTC	2 cut(s)	1025, 1103
Eco47I	GGWCC	1 cut(s)	451
Eco47III	AGCGCT	1 cut(s)	961
Eco53kI	GAGCTC	1 cut(s)	1514
Eco57I	CTGAAG	3 cut(s)	23, 1112, 1870
Eco91I	GGTNACC	2 cut(s)	1123, 1177
EcoICRI	GAGCTC	1 cut(s)	1514
EcoO65I	GGTNACC	2 cut(s)	1123, 1177
EcoRI	GAATTC	2 cut(s)	168, 2106
EcoT14I	CCWWGG	3 cut(s)	897, 1113, 2370
EcoT38I	GRGCYC	2 cut(s)	1516, 2427
ErhI	CCWWGG	3 cut(s)	897, 1113, 2370
FaqI	GGGAC	3 cut(s)	691, 1737, 2285
FbaI	TGATCA	2 cut(s)	154, 2265
FblI	GTMKAC	2 cut(s)	603, 2809
Fnu4HI	GCNGC	8 cut(s)	315, 931, 981, 984, 2277, 2280, 2283, 2772
FokI	GGATG	5 cut(s)	542, 703, 739, 763, 1592
FriOI	GRGCYC	2 cut(s)	1516, 2427
Fsp4HI	GCNGC	8 cut(s)	315, 931, 981, 984, 2277, 2280, 2283, 2772
FspBI	CTAG	6 cut(s)	50, 803, 842, 1629, 1952, 2354
GlaI	GCGC	2 cut(s)	961, 2056
GluI	GCNGC	8 cut(s)	315, 931, 981, 984, 2277, 2280, 2283, 2772
GsaI	CCCAGC	1 cut(s)	1724
GsuI	CTGGAG	1 cut(s)	1500
HaeII	RGCGCY	2 cut(s)	963, 2058
HaeIII	GGCC	2 cut(s)	1433, 2785
HapII	CCGG	4 cut(s)	563, 1639, 1872, 2408
HhaI	GCGC	2 cut(s)	962, 2057
Hin6I	GCGC	2 cut(s)	960, 2055
HinP1I	GCGC	2 cut(s)	960, 2055
HindIII	AAGCTT	3 cut(s)	1218, 1994, 2606
HpaII	CCGG	4 cut(s)	563, 1639, 1872, 2408
HphI	GGTGA	5 cut(s)	755, 1189, 1807, 1919, 2425
Hpy166II	GTNNAC	5 cut(s)	229, 604, 1297, 1798, 2810
Hpy188I	TCNGA	9 cut(s)	7, 42, 154, 657, 1092, 1170, 1231, 1278, 2140
Hpy8I	GTNNAC	5 cut(s)	229, 604, 1297, 1798, 2810
Hpy99I	CGWCG	2 cut(s)	1934, 2698
HpyAV	CCTTC	9 cut(s)	122, 286, 353, 673, 1010, 1251, 1259, 2437, 2611
HpyCH4III	ACNGT	7 cut(s)	520, 1492, 1586, 1977, 2485, 2502, 2698
HpyCH4IV	ACGT	5 cut(s)	225, 737, 799, 1800, 2758
HpyF10VI	GCNNNNNNNGC	7 cut(s)	486, 595, 1079, 1766, 2063, 2252, 2282
HpyF3I	CTNAG	7 cut(s)	186, 304, 1330, 1692, 2137, 2421, 2708
HpySE526I	ACGT	5 cut(s)	225, 737, 799, 1800, 2758
HspAI	GCGC	2 cut(s)	960, 2055
KroI	GCCGGC	1 cut(s)	562
KroNI	GCCGGC	1 cut(s)	564
Ksp22I	TGATCA	2 cut(s)	154, 2265
LmnI	GCTCC	3 cut(s)	1511, 1519, 1892
Lsp1109I	GCAGC	6 cut(s)	942, 970, 2288, 2291, 2294, 2783
LweI	GCATC	4 cut(s)	172, 2000, 2053, 2177
MaeI	CTAG	6 cut(s)	50, 803, 842, 1629, 1952, 2354
MaeII	ACGT	5 cut(s)	225, 737, 799, 1800, 2758
MaeIII	GTNAC	6 cut(s)	455, 712, 1123, 1177, 1544, 2041
MflI	RGATCY	3 cut(s)	94, 1087, 1741
MhlI	GDGCHC	3 cut(s)	1299, 1516, 2427
MlyI	GAGTC	4 cut(s)	764, 1557, 1629, 1719
MmeI	TCCRAC	1 cut(s)	1364
MroNI	GCCGGC	1 cut(s)	562
MroXI	GAANNNNTTC	1 cut(s)	662
MseI	TTAA	6 cut(s)	821, 1569, 1737, 2529, 2559, 2802
MslI	CAYNNNNRTG	5 cut(s)	80, 410, 696, 998, 2339
MspI	CCGG	4 cut(s)	563, 1639, 1872, 2408
MspR9I	CCNGG	1 cut(s)	1872
Mva1269I	GAATGC	3 cut(s)	589, 711, 1416
MwoI	GCNNNNNNNGC	7 cut(s)	486, 595, 1079, 1766, 2063, 2252, 2282
NaeI	GCCGGC	1 cut(s)	564
NciI	CCSGG	1 cut(s)	1872
NcoI	CCATGG	1 cut(s)	1113
NgoMIV	GCCGGC	1 cut(s)	562
NheI	GCTAGC	1 cut(s)	1628
NlaIV	GGNNCC	5 cut(s)	379, 561, 2453, 2548, 2767
NmuCI	GTSAC	3 cut(s)	712, 1177, 2041
NspV	TTCGAA	1 cut(s)	1918
OliI	CACNNNNGTG	1 cut(s)	80
PagI	TCATGA	1 cut(s)	1876
PceI	AGGCCT	1 cut(s)	1433
PcsI	WCGNNNNNNNCGW	1 cut(s)	222
PctI	GAATGC	3 cut(s)	589, 711, 1416
PdiI	GCCGGC	1 cut(s)	564
PdmI	GAANNNNTTC	1 cut(s)	662
PfeI	GAWTC	7 cut(s)	204, 351, 608, 658, 1165, 1313, 1439
PflMI	CCANNNNNTGG	2 cut(s)	2781, 2793
PinAI	ACCGGT	1 cut(s)	2407
PkrI	GCNGC	8 cut(s)	316, 932, 982, 985, 2278, 2281, 2284, 2773
PleI	GAGTC	4 cut(s)	764, 1557, 1629, 1719
PpsI	GAGTC	4 cut(s)	764, 1557, 1629, 1719
PshAI	GACNNNNGTC	1 cut(s)	2483
PsiI	TTATAA	1 cut(s)	2147
Psp124BI	GAGCTC	1 cut(s)	1516
Psp1406I	AACGTT	1 cut(s)	225
PspEI	GGTNACC	2 cut(s)	1123, 1177
PspFI	CCCAGC	1 cut(s)	1720
PspN4I	GGNNCC	5 cut(s)	379, 561, 2453, 2548, 2767
PspPI	GGNCC	2 cut(s)	451, 2784
PstI	CTGCAG	2 cut(s)	421, 2278
PstNI	CAGNNNCTG	2 cut(s)	626, 2045
PsuI	RGATCY	3 cut(s)	94, 1087, 1741
RsaI	GTAC	5 cut(s)	367, 582, 1153, 2474, 2757
RsaNI	GTAC	5 cut(s)	366, 581, 1152, 2473, 2756
RseI	CAYNNNNRTG	5 cut(s)	80, 410, 696, 998, 2339
SacI	GAGCTC	1 cut(s)	1516
SaqAI	TTAA	6 cut(s)	821, 1569, 1737, 2529, 2559, 2802
SatI	GCNGC	8 cut(s)	315, 931, 981, 984, 2277, 2280, 2283, 2772
Sau96I	GGNCC	2 cut(s)	451, 2784
SchI	GAGTC	4 cut(s)	764, 1557, 1629, 1719
ScrFI	CCNGG	1 cut(s)	1872
SduI	GDGCHC	3 cut(s)	1299, 1516, 2427
SfaNI	GCATC	4 cut(s)	172, 2000, 2053, 2177
SfcI	CTRYAG	4 cut(s)	417, 2274, 2684, 2740
SfuI	TTCGAA	1 cut(s)	1918
SinI	GGWCC	1 cut(s)	451
SmiMI	CAYNNNNRTG	5 cut(s)	80, 410, 696, 998, 2339
SmlI	CTYRAG	3 cut(s)	1865, 2463, 2609
SmoI	CTYRAG	3 cut(s)	1865, 2463, 2609
SseBI	AGGCCT	1 cut(s)	1433
SsiI	CCGC	4 cut(s)	314, 980, 986, 2769
SspI	AATATT	2 cut(s)	1202, 1825
SspMI	CTAG	6 cut(s)	50, 803, 842, 1629, 1952, 2354
SstI	GAGCTC	1 cut(s)	1516
StuI	AGGCCT	1 cut(s)	1433
StyD4I	CCNGG	1 cut(s)	1870
StyI	CCWWGG	3 cut(s)	897, 1113, 2370
TaaI	ACNGT	7 cut(s)	520, 1492, 1586, 1977, 2485, 2502, 2698
TaiI	ACGT	5 cut(s)	228, 740, 802, 1803, 2761
TaqI	TCGA	4 cut(s)	703, 877, 1918, 2309
TatI	WGTACW	2 cut(s)	365, 580
TauI	GCSGC	2 cut(s)	317, 983
TfiI	GAWTC	7 cut(s)	204, 351, 608, 658, 1165, 1313, 1439
Tru1I	TTAA	6 cut(s)	821, 1569, 1737, 2529, 2559, 2802
Tru9I	TTAA	6 cut(s)	821, 1569, 1737, 2529, 2559, 2802
TseFI	GTSAC	3 cut(s)	712, 1177, 2041
TseI	GCWGC	6 cut(s)	930, 983, 2276, 2279, 2282, 2771
Tsp45I	GTSAC	3 cut(s)	712, 1177, 2041
TspGWI	ACGGA	3 cut(s)	400, 443, 709
Van91I	CCANNNNNTGG	2 cut(s)	2781, 2793
VneI	GTGCAC	1 cut(s)	1295
VpaK11BI	GGWCC	1 cut(s)	451
XapI	RAATTY	7 cut(s)	168, 212, 814, 1913, 2106, 2702, 2714
XbaI	TCTAGA	2 cut(s)	49, 802
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1000
XmiI	GTMKAC	2 cut(s)	603, 2809
XmnI	GAANNNNTTC	1 cut(s)	662
XspI	CTAG	6 cut(s)	50, 803, 842, 1629, 1952, 2354

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.