pycom04g19720

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
21372201 .. 21375298
3098 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g19720.2

Sequence Viewer

Length: 3030 bp
ATGTCACTGAGGTCTCGAAAACCTGCTGGAGGACCAGCCATCTCCGATCAAGAACAGTTTCCAACCCCGAAACCTTACAAGCGGAGGTGGCGGTTGGCTCTCACAGCCATATACTTCACCAGGGCTCTTACTTCACTTGCCAAGAAACTACTAACAGGTAACAATTCCCAGTTGCTGCACTCCCTCTCGTATGTAGCCATAGACGTGCAACCCAAGAATCAAGACGATCGCGACAATGCACGTGACAAAAAACACCTTCCTTTTGTCAACATTGATCAGAAGACGCTTGCTGACATGGTGAAGGAAAAGAACCTTGAGCTTCTGAATCAATTCGGAGGGGTTCAAGAGTTGGCTGCAGTTCTTGAAACTGACATGAAGGGTGGTGTTAGCGGCGCTGAGCCTGATCTGATGCACAGAAAGAATGTTTTTGGCACCAATGAGTACCAGAAGCCGCCTGTGAAAGGGTTGCTGAGTTTCGTGCTTGAAGCTTTCAAGGACCCCACAATTATAATACTTTTGGTATGTGCAATACTCTCTCTAGGGTTTGGTATTAAACAGCATGGCTTGAAAGATGGGTGGTATGACGGTGGCAGCATCATCGTTGCTGTATTCTTGGTCGTTATTGTATCTGCACTTTCCAACTTTAAGCAGTCAAGACAATTTGAAAAGCTTTCTTCGAAGAGCGATGACATTCGTGTGGAAGTTGTGAGGGATGGACTGCGCCGTCCTACATCAATCTTTGATATTGTGGTTGGTGATCTTGTGTGTTTGAAGGTCGGTGATCAGGTTCCGGCAGACGGTTTGTTCTTAGAAGGGCATTCGTTGAAGGTGGATGAGTCTAGCATGACCGGAGAAAGCAACCACATTGAGATCAATGATGGAAGCAACCCTTTTCTTCAATCCGGTACAAAGGTGACAGATGGATTTGGCTTGATGATTGTGACTTCTGTGGGCATGAACACACTGTGGGGAGAGATGATGAGCTCGATCAGCCGCGATTTGGATGAGCAAACACCTTTGCAAGTGCGCCTCAACAACCTGACTTCGTACATTGGGAAGGTTGGTTTGGCAGTGGCTCTCCTTGTTCTTGTGGTTTCTCTAATTCGTTATTTCACAGGAAACACCGTAGATGTCAGCGGAAATAGGGAATTTGGAGGCAGAAAGATGAAGTTTGATGATCTGATCAATGGTGTTGTGGGGATTGTAGCTGCAGCAATTACCATTGTCGTGGTTGCGATTCCTGAAGGCCTGCCTCTGGCTGTTACTTTGACCTTGGCTTATTCAATGAAGAAAATGATGAATGACAATGCTTTGGTTCGGAAGCTGTCCGCTTGCGAGACAATGGGATCGGCAACAACAATCTGCACAGACAAAACAGGTACTCTTACTTTGAATAAGATGAAGGTCACCGAGTTCTGGCTTGGTACACAAGTAATGACAGAAGAGAATATCACCGAGATAGCGCCAAACGTCCTTCATTTACTCCAAGAGGCTGTTGGTTTAAACACAACCGGAAGTATTTGTAAACCAAATTCTTCATCCCCTGAGATCTCGGGTAGCCCTACTGAAAAAGCAATACTTTCATGGGCCTTGTTTGATTTGGGTATGAACATTGATGAAGTGAAACAAGGCTGTGAGATAATTCATGTAGAAACCTTCAATTCGCAGAAAAAGAGAAGCGGTGTTTTGATTAGGAGGAACAACGAAAAGGGTACTCAGACGCATTGGAAAGGAGCTGCTGAGATGATACTCGCAATGTGCGCAAATTATTATGATAAAACTGGGGCGCTAAGAGCGATGGATGACGAAGAAAGAAAGCGTGTTGGATCAACCAGGTTCAGAACATGGCATCAAAAAGCCTCCGGTGCATTGCCTTTGCGCATAGAATGCTTGAAGACGAGAATGATCAGACCAGGAGTCAGAATAGCAGTAGACGGTTGCAGAGCTGCTGGAGTGAACGTTAAGATGATAACTGGCGACAATCTGCATACTGCAAGAGCTATAGCGTTTGAGTGTGGGATACTCAAAACATATGAAGATTTGGAGACTACTGAGTCTGTAGTAGAAGGGGTACAATTCAGAGGTTACTCACCTGAAGAGAGGATGGAAAGGATCGATAAGATACGTGTGATGGCAAGATCCTCACCACTTGACAAGCTTCTGATGGTGCAATGCTTGAAGCAGAAAGGCCATGTGGTTGCGGTCACGGGAGATGGCACGAATGATGCACCTGCGCTAAAAGAAGCAGACATTGGGCTTTCAATGGGGATCCAAGGCACCGAAGTTGCAAAGGAGAGCTCGGATATCGTCATCTTAGATGACAACTTCGCATCTGTTGTGACAGTTTTGAGATGGGGAAGGTGTGTGTACAACAACATTCAAAAGTTCCTCCAGTTCCAACTCACTGTCAATGTCGCTGCGCTTGTTATCAACTTTGTTGCTGCTGTTTCTTCTGGTAAAGTTCCACTGACTGCAGTGCAGCTGCTGTGGGTGAATCTCATCATGGACACCTTGGGGGCTTTAGCTTTGGCCACAGAAGAACCGACAAATGATCTCATGGAACAGAAGCCCGTGGGACGAACCGAACCACTCATTACTAGAATCATGTGGAGAAACCTCATCGCTCAGGCCTTGTATCAAATCACAATCTTGCTAACCCTACAGTTTAAGGGTCGATCCATCTTCGGCGTGGACGAAAAGGTCAAGAACACCCTTATTTTCAACACATTTGTTTTCTGCCAAGTCTTCAACGAATTCAATGCAAGAAAACTTGAAAAGAAGAACATATTCAAGGGGTTACTCAAAAGCAAGCTGTTTTTGGCAATAATCGTTATTACAATAGTTCTTCAACTGCTAATGGTGGAATTTCTGAAGAAGTTTGCCAGCACTGAGAGGCTGGACTGGGGGCAATGGGGTGCTTGCGTCGGAATTGCAGCATTGTCTTGGCCGATTGGCTGGCTTGTTAAGGGCATTCCAGTTTCTGGATGGCAGGTTCCAAGGCTGAGAGCTCCTGCATTGTCAAACACATAG

Protein Analysis

1010

Amino Acids

111.19

Weight (kDa)

8.84

Isoelectric Point (pI)

35.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 509
AarI CACCTGC 1 cut(s) 2239
AasI GACNNNNNNGTC 3 cut(s) 723, 2053, 2699
Acc16I TGCGCA 2 cut(s) 1762, 1880
Acc36I ACCTGC 3 cut(s) 31, 2239, 2980
AccB1I GGYRCC 2 cut(s) 431, 2276
AccB7I CCANNNNNTGG 1 cut(s) 2981
AccI GTMKAC 1 cut(s) 1932
AccII CGCG 2 cut(s) 231, 996
AciI CCGC 9 cut(s) 82, 91, 390, 452, 994, 1137, 1329, 1680, 2201
AclI AACGTT 1 cut(s) 1959
AclWI GGATC 7 cut(s) 1354, 1834, 2120, 2133, 2263, 2276, 2670
AcoI YGGCCR 2 cut(s) 2529, 2945
AcsI RAATTY 4 cut(s) 1148, 1531, 2753, 2864
AcuI CTGAAG 3 cut(s) 1263, 2115, 2891
AcvI CACGTG 1 cut(s) 242
AdeI CACNNNGTG 1 cut(s) 966
AfaI GTAC 8 cut(s) 443, 907, 1049, 1381, 1426, 1714, 2073, 2369
AfiI CCNNNNNNNGG 7 cut(s) 29, 461, 797, 1000, 1255, 1416, 2981
AflIII ACRYGT 1 cut(s) 2125
AhdI GACNNNNNGTC 1 cut(s) 1916
AjiI CACGTC 1 cut(s) 205
AjnI CCWGG 3 cut(s) 119, 1832, 1912
AjuI GAANNNNNNNTTGG 4 cut(s) 1049, 1081, 2235, 2267
AloI GAACNNNNNNTCC 2 cut(s) 2976, 3008
Alw21I GWGCWC 3 cut(s) 986, 2300, 3010
Alw26I GTCTC 3 cut(s) 18, 1331, 2039
AlwI GGATC 7 cut(s) 1354, 1834, 2120, 2133, 2263, 2276, 2670
AlwNI CAGNNNCTG 3 cut(s) 175, 2485, 2981
Ama87I CYCGRG 1 cut(s) 1552
AoxI GGCC 6 cut(s) 1246, 1587, 2188, 2529, 2628, 2945
ApoI RAATTY 4 cut(s) 1148, 1531, 2753, 2864
Asp700I GAANNNNTTC 3 cut(s) 57, 329, 2786
AspLEI GCGC 9 cut(s) 395, 723, 1029, 1465, 1763, 1789, 1881, 2236, 2422
AspS9I GGNCC 3 cut(s) 32, 496, 1587
AsuII TTCGAA 1 cut(s) 677
AvaI CYCGRG 1 cut(s) 1552
AvaII GGWCC 2 cut(s) 32, 496
BaeI ACNNNNGTAYC 4 cut(s) 897, 930, 1416, 1449
BalI TGGCCA 1 cut(s) 2531
BamHI GGATCC 1 cut(s) 2268
BanI GGYRCC 2 cut(s) 431, 2276
BanII GRGCYC 4 cut(s) 127, 986, 2300, 3010
BbrPI CACGTG 1 cut(s) 242
BbsI GAAGAC 3 cut(s) 287, 1901, 2737
Bbv12I GWGCWC 3 cut(s) 986, 2300, 3010
BceAI ACGGC 1 cut(s) 708
BcgI CGANNNNNNTGC 4 cut(s) 580, 614, 2741, 2775
BciT130I CCWGG 3 cut(s) 121, 1834, 1914
BciVI GTATCC 1 cut(s) 2013
BclI TGATCA 4 cut(s) 274, 781, 1182, 1905
BcoDI GTCTC 3 cut(s) 18, 1331, 2039
BfaI CTAG 3 cut(s) 539, 840, 2598
BfmI CTRYAG 6 cut(s) 354, 1209, 2001, 2058, 2472, 2660
BfoI RGCGCY 3 cut(s) 396, 1466, 1790
BfuAI ACCTGC 3 cut(s) 31, 2239, 2980
BfuI GTATCC 1 cut(s) 2013
BglII AGATCT 1 cut(s) 1548
BlpI GCTNAGC 1 cut(s) 396
Bme1390I CCNGG 3 cut(s) 121, 1834, 1914
Bme18I GGWCC 2 cut(s) 32, 496
BmeRI GACNNNNNGTC 1 cut(s) 1916
BmeT110I CYCGRG 1 cut(s) 1552
BmgBI CACGTC 1 cut(s) 205
BmgT120I GGNCC 3 cut(s) 32, 496, 1587
BmiI GGNNCC 6 cut(s) 433, 498, 789, 2270, 2278, 2994
BmrFI CCNGG 3 cut(s) 121, 1834, 1914
BmrI ACTGGG 3 cut(s) 163, 1791, 2911
BmsI GCATC 5 cut(s) 399, 603, 1858, 2215, 2339
BmuI ACTGGG 3 cut(s) 163, 1791, 2911
BpiI GAAGAC 3 cut(s) 287, 1901, 2737
BpmI CTGGAG 3 cut(s) 48, 1971, 2375
Bpu10I CCTNAGC 1 cut(s) 2625
Bpu1102I GCTNAGC 1 cut(s) 396
Bpu14I TTCGAA 1 cut(s) 677
BpuEI CTTGAG 1 cut(s) 335
Bsa29I ATCGAT 1 cut(s) 2115
BsaAI YACGTR 2 cut(s) 242, 2126
BsaI GGTCTC 1 cut(s) 18
BsaJI CCNNGG 6 cut(s) 120, 1272, 2272, 2511, 2571, 2996
BsaWI WCCGGW 4 cut(s) 848, 902, 1511, 1862
BsaXI ACNNNNNCTCC 2 cut(s) 1944, 1974
Bsc4I CCNNNNNNNGG 7 cut(s) 29, 461, 797, 1000, 1255, 1416, 2981
Bse1I ACTGG 6 cut(s) 169, 1786, 1978, 2392, 2906, 2975
Bse3DI GCAATG 4 cut(s) 1761, 1868, 2177, 2915
BseBI CCWGG 3 cut(s) 121, 1834, 1914
BseCI ATCGAT 1 cut(s) 2115
BseDI CCNNGG 6 cut(s) 120, 1272, 2272, 2511, 2571, 2996
BseGI GGATG 7 cut(s) 718, 838, 1009, 1538, 1807, 2109, 2990
BseLI CCNNNNNNNGG 7 cut(s) 29, 461, 797, 1000, 1255, 1416, 2981
BseMI GCAATG 4 cut(s) 1761, 1868, 2177, 2915
BseMII CTCAG 9 cut(s) 387, 461, 1536, 1730, 1731, 2043, 2639, 2880, 2993
BseNI ACTGG 6 cut(s) 169, 1786, 1978, 2392, 2906, 2975
BsgI GTGCAG 4 cut(s) 161, 615, 1348, 2498
Bsh1236I CGCG 2 cut(s) 231, 996
Bsh1285I CGRYCG 1 cut(s) 229
BshFI GGCC 6 cut(s) 1248, 1589, 2190, 2531, 2630, 2947
BshNI GGYRCC 2 cut(s) 431, 2276
BshVI ATCGAT 1 cut(s) 2115
BsiEI CGRYCG 1 cut(s) 229
BsiHKAI GWGCWC 3 cut(s) 986, 2300, 3010
BsiHKCI CYCGRG 1 cut(s) 1552
BsiSI CCGG 5 cut(s) 791, 849, 903, 1512, 1863
BslFI GGGAC 1 cut(s) 2589
BslI CCNNNNNNNGG 7 cut(s) 29, 461, 797, 1000, 1255, 1416, 2981
BsmAI GTCTC 3 cut(s) 18, 1331, 2039
BsmFI GGGAC 1 cut(s) 2589
BsmI GAATGC 3 cut(s) 817, 1892, 2970
BsnI GGCC 6 cut(s) 1248, 1589, 2190, 2531, 2630, 2947
Bso31I GGTCTC 1 cut(s) 18
BsoBI CYCGRG 1 cut(s) 1552
Bsp119I TTCGAA 1 cut(s) 677
Bsp1286I GDGCHC 4 cut(s) 127, 986, 2300, 3010
Bsp1407I TGTACA 1 cut(s) 2367
Bsp1720I GCTNAGC 1 cut(s) 396
Bsp68I TCGCGA 1 cut(s) 231
BspACI CCGC 9 cut(s) 82, 91, 390, 452, 994, 1137, 1329, 1680, 2201
BspANI GGCC 6 cut(s) 1248, 1589, 2190, 2531, 2630, 2947
BspCNI CTCAG 9 cut(s) 388, 462, 1537, 1729, 1732, 2044, 2638, 2881, 2994
BspDI ATCGAT 1 cut(s) 2115
BspFNI CGCG 2 cut(s) 231, 996
BspLI GGNNCC 6 cut(s) 433, 498, 789, 2270, 2278, 2994
BspMAI CTGCAG 3 cut(s) 358, 1213, 2476
BspMI ACCTGC 3 cut(s) 31, 2239, 2980
BspPI GGATC 7 cut(s) 1354, 1834, 2120, 2133, 2263, 2276, 2670
BspQI GCTCTTC 1 cut(s) 674
BspT104I TTCGAA 1 cut(s) 677
BspT107I GGYRCC 2 cut(s) 431, 2276
BspTNI GGTCTC 1 cut(s) 18
BsrDI GCAATG 4 cut(s) 1761, 1868, 2177, 2915
BsrGI TGTACA 1 cut(s) 2367
BsrI ACTGG 6 cut(s) 169, 1786, 1978, 2392, 2906, 2975
BssECI CCNNGG 6 cut(s) 120, 1272, 2272, 2511, 2571, 2996
BssT1I CCWWGG 4 cut(s) 1272, 2272, 2511, 2996
Bst2UI CCWGG 3 cut(s) 121, 1834, 1914
Bst4CI ACNGT 9 cut(s) 57, 587, 800, 966, 1126, 1937, 2344, 2407, 2664
Bst6I CTCTTC 3 cut(s) 674, 1437, 2091
BstAPI GCANNNNNTGC 1 cut(s) 1887
BstAUI TGTACA 1 cut(s) 2367
BstBAI YACGTR 2 cut(s) 242, 2126
BstBI TTCGAA 1 cut(s) 677
BstC8I GCNNGC 7 cut(s) 288, 1250, 1333, 2810, 2884, 2920, 2957
BstDSI CCRYGG 1 cut(s) 2571
BstEII GGTNACC 1 cut(s) 1405
BstENI CCTNNNNNAGG 2 cut(s) 27, 459
BstF5I GGATG 7 cut(s) 718, 838, 1009, 1538, 1807, 2109, 2990
BstFNI CGCG 2 cut(s) 231, 996
BstH2I RGCGCY 3 cut(s) 396, 1466, 1790
BstHHI GCGC 9 cut(s) 395, 723, 1029, 1465, 1763, 1789, 1881, 2236, 2422
BstMAI GTCTC 3 cut(s) 18, 1331, 2039
BstMCI CGRYCG 1 cut(s) 229
BstMWI GCNNNNNNNGC 7 cut(s) 88, 104, 990, 1760, 1793, 1865, 1887
BstNI CCWGG 3 cut(s) 121, 1834, 1914
BstPI GGTNACC 1 cut(s) 1405
BstSCI CCNGG 3 cut(s) 119, 1832, 1912
BstSFI CTRYAG 6 cut(s) 354, 1209, 2001, 2058, 2472, 2660
BstUI CGCG 2 cut(s) 231, 996
BstV2I GAAGAC 3 cut(s) 287, 1901, 2737
BstX2I RGATCY 3 cut(s) 1548, 2138, 2268
BstXI CCANNNNNNTGG 1 cut(s) 1228
BstYI RGATCY 3 cut(s) 1548, 2138, 2268
Bsu15I ATCGAT 1 cut(s) 2115
BsuI GTATCC 1 cut(s) 2013
BsuRI GGCC 6 cut(s) 1248, 1589, 2190, 2531, 2630, 2947
BsuTUI ATCGAT 1 cut(s) 2115
BtgI CCRYGG 1 cut(s) 2571
BtgZI GCGATG 3 cut(s) 699, 1811, 2605
BtrI CACGTC 1 cut(s) 205
BtsCI GGATG 7 cut(s) 718, 838, 1009, 1538, 1807, 2109, 2990
BtsI GCAGTG 2 cut(s) 1077, 2481
BtsIMutI CAGTG 7 cut(s) 5, 962, 1077, 2403, 2465, 2481, 2886
BtuMI TCGCGA 1 cut(s) 231
BveI ACCTGC 3 cut(s) 31, 2239, 2980
Cac8I GCNNGC 7 cut(s) 288, 1250, 1333, 2810, 2884, 2920, 2957
CaiI CAGNNNCTG 3 cut(s) 175, 2485, 2981
CfoI GCGC 9 cut(s) 395, 723, 1029, 1465, 1763, 1789, 1881, 2236, 2422
Cfr13I GGNCC 3 cut(s) 32, 496, 1587
ClaI ATCGAT 1 cut(s) 2115
CseI GACGC 3 cut(s) 292, 1729, 2911
CsiI ACCWGGT 1 cut(s) 1832
Csp6I GTAC 8 cut(s) 442, 906, 1048, 1380, 1425, 1713, 2072, 2368
CviQI GTAC 8 cut(s) 442, 906, 1048, 1380, 1425, 1713, 2072, 2368
DraI TTTAAA 1 cut(s) 1503
DraIII CACNNNGTG 1 cut(s) 966
DrdI GACNNNNNNGTC 3 cut(s) 723, 2053, 2699
DriI GACNNNNNGTC 1 cut(s) 1916
DseDI GACNNNNNNGTC 3 cut(s) 723, 2053, 2699
EaeI YGGCCR 2 cut(s) 2529, 2945
Eam1104I CTCTTC 3 cut(s) 674, 1437, 2091
Eam1105I GACNNNNNGTC 1 cut(s) 1916
EarI CTCTTC 3 cut(s) 674, 1437, 2091
Ecl136II GAGCTC 3 cut(s) 984, 2298, 3008
Eco130I CCWWGG 4 cut(s) 1272, 2272, 2511, 2996
Eco147I AGGCCT 2 cut(s) 1248, 2630
Eco24I GRGCYC 4 cut(s) 127, 986, 2300, 3010
Eco31I GGTCTC 1 cut(s) 18
Eco32I GATATC 1 cut(s) 2305
Eco47I GGWCC 2 cut(s) 32, 496
Eco53kI GAGCTC 3 cut(s) 984, 2298, 3008
Eco57I CTGAAG 3 cut(s) 1263, 2115, 2891
Eco72I CACGTG 1 cut(s) 242
Eco88I CYCGRG 1 cut(s) 1552
Eco91I GGTNACC 1 cut(s) 1405
EcoICRI GAGCTC 3 cut(s) 984, 2298, 3008
EcoNI CCTNNNNNAGG 2 cut(s) 27, 459
EcoO109I RGGNCCY 1 cut(s) 496
EcoO65I GGTNACC 1 cut(s) 1405
EcoRI GAATTC 1 cut(s) 2753
EcoRII CCWGG 3 cut(s) 119, 1832, 1912
EcoRV GATATC 1 cut(s) 2305
EcoT14I CCWWGG 4 cut(s) 1272, 2272, 2511, 2996
EcoT38I GRGCYC 4 cut(s) 127, 986, 2300, 3010
ErhI CCWWGG 4 cut(s) 1272, 2272, 2511, 2996
FalI AAGNNNNNCTT 4 cut(s) 874, 906, 1563, 1595
FaqI GGGAC 1 cut(s) 2589
FauNDI CATATG 1 cut(s) 2032
FbaI TGATCA 4 cut(s) 274, 781, 1182, 1905
FblI GTMKAC 1 cut(s) 1932
FokI GGATG 7 cut(s) 725, 845, 1016, 1525, 1814, 2116, 2997
FriOI GRGCYC 4 cut(s) 127, 986, 2300, 3010
FspBI CTAG 3 cut(s) 539, 840, 2598
FspI TGCGCA 2 cut(s) 1762, 1880
GlaI GCGC 9 cut(s) 394, 722, 1028, 1464, 1762, 1788, 1880, 2235, 2421
GsuI CTGGAG 3 cut(s) 48, 1971, 2375
HaeII RGCGCY 3 cut(s) 396, 1466, 1790
HaeIII GGCC 6 cut(s) 1248, 1589, 2190, 2531, 2630, 2947
HapII CCGG 5 cut(s) 791, 849, 903, 1512, 1863
HgaI GACGC 3 cut(s) 292, 1729, 2911
HhaI GCGC 9 cut(s) 395, 723, 1029, 1465, 1763, 1789, 1881, 2236, 2422
Hin6I GCGC 9 cut(s) 393, 721, 1027, 1463, 1761, 1787, 1879, 2234, 2420
HinP1I GCGC 9 cut(s) 393, 721, 1027, 1463, 1761, 1787, 1879, 2234, 2420
HincII GTYRAC 1 cut(s) 268
HindII GTYRAC 1 cut(s) 268
HindIII AAGCTT 3 cut(s) 486, 668, 2156
HinfI GANTC 8 cut(s) 217, 325, 836, 1237, 1917, 2054, 2494, 2601
HpaII CCGG 5 cut(s) 791, 849, 903, 1512, 1863
Hpy166II GTNNAC 7 cut(s) 268, 1427, 1526, 1933, 1957, 2368, 2692
Hpy8I GTNNAC 7 cut(s) 268, 1427, 1526, 1933, 1957, 2368, 2692
Hpy99I CGWCG 1 cut(s) 2927
HpyCH4III ACNGT 9 cut(s) 57, 587, 800, 966, 1126, 1937, 2344, 2407, 2664
HpyCH4IV ACGT 5 cut(s) 204, 241, 1470, 1959, 2125
HpyF10VI GCNNNNNNNGC 7 cut(s) 88, 104, 990, 1760, 1793, 1865, 1887
HpySE526I ACGT 5 cut(s) 204, 241, 1470, 1959, 2125
HspAI GCGC 9 cut(s) 393, 721, 1027, 1463, 1761, 1787, 1879, 2234, 2420
Ksp22I TGATCA 4 cut(s) 274, 781, 1182, 1905
LguI GCTCTTC 1 cut(s) 674
LmnI GCTCC 2 cut(s) 1733, 3013
LweI GCATC 5 cut(s) 399, 603, 1858, 2215, 2339
MabI ACCWGGT 1 cut(s) 1832
MaeI CTAG 3 cut(s) 539, 840, 2598
MaeII ACGT 5 cut(s) 204, 241, 1470, 1959, 2125
MflI RGATCY 3 cut(s) 1548, 2138, 2268
MhlI GDGCHC 4 cut(s) 127, 986, 2300, 3010
MlsI TGGCCA 1 cut(s) 2531
MluNI TGGCCA 1 cut(s) 2531
MlyI GAGTC 3 cut(s) 845, 1926, 2063
MmeI TCCRAC 5 cut(s) 86, 663, 1804, 2422, 2905
Mox20I TGGCCA 1 cut(s) 2531
MroXI GAANNNNTTC 3 cut(s) 57, 329, 2786
MscI TGGCCA 1 cut(s) 2531
MseI TTAA 6 cut(s) 552, 645, 1502, 1962, 2667, 2964
MslI CAYNNNNRTG 3 cut(s) 203, 695, 1226
Msp20I TGGCCA 1 cut(s) 2531
MspA1I CMGCKG 2 cut(s) 1137, 2482
MspI CCGG 5 cut(s) 791, 849, 903, 1512, 1863
MspR9I CCNGG 3 cut(s) 121, 1834, 1914
MssI GTTTAAAC 1 cut(s) 1503
Mva1269I GAATGC 3 cut(s) 817, 1892, 2970
MvaI CCWGG 3 cut(s) 121, 1834, 1914
MvnI CGCG 2 cut(s) 231, 996
MwoI GCNNNNNNNGC 7 cut(s) 88, 104, 990, 1760, 1793, 1865, 1887
NdeI CATATG 1 cut(s) 2032
NlaIV GGNNCC 6 cut(s) 433, 498, 789, 2270, 2278, 2994
NmuCI GTSAC 7 cut(s) 3, 242, 913, 940, 1405, 2203, 2338
NruI TCGCGA 1 cut(s) 231
NsbI TGCGCA 2 cut(s) 1762, 1880
NspV TTCGAA 1 cut(s) 677
PaqCI CACCTGC 1 cut(s) 2239
PceI AGGCCT 2 cut(s) 1248, 2630
PciSI GCTCTTC 1 cut(s) 674
PcsI WCGNNNNNNNCGW 1 cut(s) 2691
PctI GAATGC 3 cut(s) 817, 1892, 2970
PdmI GAANNNNTTC 3 cut(s) 57, 329, 2786
PfeI GAWTC 5 cut(s) 217, 325, 1237, 2494, 2601
PflMI CCANNNNNTGG 1 cut(s) 2981
Ple19I CGATCG 1 cut(s) 229
PleI GAGTC 3 cut(s) 844, 1925, 2062
PmaCI CACGTG 1 cut(s) 242
PmeI GTTTAAAC 1 cut(s) 1503
PmlI CACGTG 1 cut(s) 242
PpsI GAGTC 3 cut(s) 844, 1925, 2062
Ppu21I YACGTR 2 cut(s) 242, 2126
PpuMI RGGWCCY 1 cut(s) 496
PsiI TTATAA 1 cut(s) 509
Psp124BI GAGCTC 3 cut(s) 986, 2300, 3010
Psp1406I AACGTT 1 cut(s) 1959
Psp5II RGGWCCY 1 cut(s) 496
Psp6I CCWGG 3 cut(s) 119, 1832, 1912
PspCI CACGTG 1 cut(s) 242
PspEI GGTNACC 1 cut(s) 1405
PspGI CCWGG 3 cut(s) 119, 1832, 1912
PspN4I GGNNCC 6 cut(s) 433, 498, 789, 2270, 2278, 2994
PspPI GGNCC 3 cut(s) 32, 496, 1587
PspPPI RGGWCCY 1 cut(s) 496
PstI CTGCAG 3 cut(s) 358, 1213, 2476
PstNI CAGNNNCTG 3 cut(s) 175, 2485, 2981
PsuI RGATCY 3 cut(s) 1548, 2138, 2268
PvuI CGATCG 1 cut(s) 229
PvuII CAGCTG 1 cut(s) 2482
RruI TCGCGA 1 cut(s) 231
RsaI GTAC 8 cut(s) 443, 907, 1049, 1381, 1426, 1714, 2073, 2369
RsaNI GTAC 8 cut(s) 442, 906, 1048, 1380, 1425, 1713, 2072, 2368
RseI CAYNNNNRTG 3 cut(s) 203, 695, 1226
SacI GAGCTC 3 cut(s) 986, 2300, 3010
SapI GCTCTTC 1 cut(s) 674
SaqAI TTAA 6 cut(s) 552, 645, 1502, 1962, 2667, 2964
Sau96I GGNCC 3 cut(s) 32, 496, 1587
SchI GAGTC 3 cut(s) 845, 1926, 2063
ScrFI CCNGG 3 cut(s) 121, 1834, 1914
SduI GDGCHC 4 cut(s) 127, 986, 2300, 3010
SexAI ACCWGGT 1 cut(s) 1832
SfaNI GCATC 5 cut(s) 399, 603, 1858, 2215, 2339
SfcI CTRYAG 6 cut(s) 354, 1209, 2001, 2058, 2472, 2660
SfuI TTCGAA 1 cut(s) 677
SinI GGWCC 2 cut(s) 32, 496
SmiMI CAYNNNNRTG 3 cut(s) 203, 695, 1226
SmlI CTYRAG 1 cut(s) 314
SmoI CTYRAG 1 cut(s) 314
SseBI AGGCCT 2 cut(s) 1248, 2630
SsiI CCGC 9 cut(s) 82, 91, 390, 452, 994, 1137, 1329, 1680, 2201
SspMI CTAG 3 cut(s) 539, 840, 2598
SstI GAGCTC 3 cut(s) 986, 2300, 3010
StuI AGGCCT 2 cut(s) 1248, 2630
StyD4I CCNGG 3 cut(s) 119, 1832, 1912
StyI CCWWGG 4 cut(s) 1272, 2272, 2511, 2996
TaaI ACNGT 9 cut(s) 57, 587, 800, 966, 1126, 1937, 2344, 2407, 2664
TaiI ACGT 5 cut(s) 207, 244, 1473, 1962, 2128
TaqI TCGA 5 cut(s) 16, 677, 986, 2115, 2674
TatI WGTACW 1 cut(s) 2367
TauI GCSGC 3 cut(s) 393, 454, 996
TfiI GAWTC 5 cut(s) 217, 325, 1237, 2494, 2601
Tru1I TTAA 6 cut(s) 552, 645, 1502, 1962, 2667, 2964
Tru9I TTAA 6 cut(s) 552, 645, 1502, 1962, 2667, 2964
TscAI CASTG 7 cut(s) 12, 969, 1077, 2410, 2472, 2481, 2893
TseFI GTSAC 7 cut(s) 3, 242, 913, 940, 1405, 2203, 2338
Tsp45I GTSAC 7 cut(s) 3, 242, 913, 940, 1405, 2203, 2338
TspRI CASTG 7 cut(s) 12, 969, 1077, 2410, 2472, 2481, 2893
Van91I CCANNNNNTGG 1 cut(s) 2981
VpaK11BI GGWCC 2 cut(s) 32, 496
XagI CCTNNNNNAGG 2 cut(s) 27, 459
XapI RAATTY 4 cut(s) 1148, 1531, 2753, 2864
XcmI CCANNNNNNNNNTGG 3 cut(s) 1493, 2686, 2982
XmiI GTMKAC 1 cut(s) 1932
XmnI GAANNNNTTC 3 cut(s) 57, 329, 2786
XspI CTAG 3 cut(s) 539, 840, 2598
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.