Rorug03G0317300

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
34274254 .. 34275778
1525 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0317300.1

Sequence Viewer

Length: 1344 bp
ATGATTTTGTCGTGGAGGAGAAGAAGGGCCAGCAAGTATGCCAACAGGAAGGAGTTTTCCGGCGAGACTCTAGACATGGGGATGGAGGAGATCGTGATTCCATCCCACTTCCGGTGCCCTATTACTCTGGACCTCATGAAAGATCCGGTCACTTTGTCGACGGGGATGACCTACGACAGGTCCAGCATCGACGCCTGGATCGAGAAAGGGAACAAGACCTGTCCGGTAACCAATCAAGTTCTGGCAACGTTCGACCAAATCCCCAACCACGCGCTACGTAAGATGATCCAAGACTGGTGCGTCCAGAACCGCTCTCACGGCGTGGAACGCATCCCCACGCCTCGGATTCCGGTGTCTGCGTACGAGGTTACTAGAGTTTATCAGAGAATCATGGCCGCGACTCAACGCGGCGATTACAACAAGTGTCTAGAGTTGGTGGCCAAGGTCAGAGCTTGGGGAAAAGACAGCGAGCGTAACAAGAAGTGTATCGTGGAGAACAGAATGGGCTGCTGCTTGTCGGCCACTTTCGAGTTCTTCGCCGGAAATGAGGAAACAACGTTGTTGGAGGAGATCTTGGCCGTGCTGACATGGATGTTTCCGATTGGTGAAGAAGGCCAATCAAAGCTTGGATCTGCAAAATCGTTGAGATGTTTGGTGTGGTTTTTGGAGGGAAAAGATCTCTCCTCAAGGCAAAACGCAGTTTCGGTACTGAGAAAGTTGGTTTCTTTGGATCAAAAACATGTGGATGCGATTGTGGAGATTGAGGGAGCCATTGAAGCATTGGTGAAGATAATTAGGGAGGGCCCTAGTGTCTGTCCTACAGCAACTAAAGCTTCTCTATCCTGTGTCTTCTACATGATTTCAGGAGCAAGTGATGAAATCAAATCAAGATTTGTGGAATTGGGTTTGGTTTCTTTGTTGCTAGAGATGCTTGTTGATGCAGAGAAGAGCCTATGTGAGAGGGCTTTGGGGGTTTTGGAAGGTCTTTGTGATTGCAAGCAAGGGAGAGAAAAGGCCTACGAGAATGCTCTAACCATGCCTCTTTTGGTTAAGAAGATGCTAAGGGTATCAGTCTTGGCGAATGAGTTTTCGGTTTCTATAATTTGGAAGCTCTGCAGGAACCAAAATGGTGATGGTGATGATGAGGAAGACATTAAGATTTTGATGGAGGCACTTCAAGTGGGCGCATTTCAGAAGTTCTTGGTTCTGTTGCAGGTTGGGTGTGGTGATGGAATCAAGGACAAGGTTACTGAGTTGTTGAAGTTGTTCAATCTTCACATCAGTAAATTAGACTGTGTTGATTCATCCATGGATTTTAAGTATCTGAAGAAAGGCCAATTTTGA

Protein Analysis

447

Amino Acids

50.32

Weight (kDa)

7.41

Isoelectric Point (pI)

38.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
U-box PF04564 33 - 104 4.5e-22 U-box domain
ARM_PUB PF25598 122 - 441 8.2e-74 Plant U-box protein ARM repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 299
Acc36I ACCTGC 1 cut(s) 1204
AccB1I GGYRCC 1 cut(s) 114
AccBSI CCGCTC 1 cut(s) 312
AccI GTMKAC 1 cut(s) 158
AccII CGCG 3 cut(s) 272, 398, 408
AciI CCGC 3 cut(s) 310, 396, 408
AclI AACGTT 2 cut(s) 248, 557
AclWI GGATC 5 cut(s) 137, 206, 280, 637, 738
AcoI YGGCCR 4 cut(s) 393, 438, 519, 576
AcyI GRCGYC 1 cut(s) 192
AdeI CACNNNGTG 1 cut(s) 322
AfaI GTAC 2 cut(s) 362, 708
AfiI CCNNNNNNNGG 3 cut(s) 111, 177, 342
AflIII ACRYGT 1 cut(s) 739
AgsI TTSAA 4 cut(s) 776, 1178, 1261, 1270
AjnI CCWGG 1 cut(s) 194
AluBI AGCT 4 cut(s) 452, 625, 833, 1111
AluI AGCT 4 cut(s) 452, 625, 833, 1111
Alw26I GTCTC 1 cut(s) 59
AlwI GGATC 5 cut(s) 137, 206, 280, 637, 738
AoxI GGCC 9 cut(s) 27, 393, 438, 519, 576, 613, 802, 1014, 1333
ApaI GGGCCC 1 cut(s) 806
ApeKI GCWGC 2 cut(s) 507, 510
Asp700I GAANNNNTTC 1 cut(s) 1265
AspLEI GCGC 2 cut(s) 274, 1187
AspS9I GGNCC 5 cut(s) 27, 130, 180, 802, 803
AsuHPI GGTGA 5 cut(s) 617, 796, 1142, 1148, 1238
AvaII GGWCC 2 cut(s) 130, 180
BaeGI GKGCMC 2 cut(s) 119, 806
BalI TGGCCA 1 cut(s) 440
BanI GGYRCC 1 cut(s) 114
BanII GRGCYC 1 cut(s) 806
BbsI GAAGAC 2 cut(s) 841, 1155
BbvI GCAGC 2 cut(s) 494, 497
BccI CCATC 5 cut(s) 76, 109, 1127, 1159, 1223
BceAI ACGGC 2 cut(s) 334, 563
BciT130I CCWGG 1 cut(s) 196
BcoDI GTCTC 1 cut(s) 59
BfaI CTAG 5 cut(s) 71, 372, 428, 807, 923
BfmI CTRYAG 2 cut(s) 819, 1114
BfuAI ACCTGC 1 cut(s) 1204
BglII AGATCT 2 cut(s) 570, 676
BisI GCNGC 4 cut(s) 396, 409, 508, 511
BlsI GCNGC 4 cut(s) 397, 410, 509, 512
Bme1390I CCNGG 1 cut(s) 196
Bme18I GGWCC 2 cut(s) 130, 180
BmgT120I GGNCC 5 cut(s) 27, 130, 180, 802, 803
BmiI GGNNCC 4 cut(s) 116, 769, 804, 1121
BmrFI CCNGG 1 cut(s) 196
BmsI GCATC 6 cut(s) 195, 339, 736, 918, 928, 1047
BpiI GAAGAC 2 cut(s) 841, 1155
Bpu10I CCTNAGC 1 cut(s) 1061
BpuEI CTTGAG 1 cut(s) 670
BsaAI YACGTR 1 cut(s) 278
BsaHI GRCGYC 1 cut(s) 192
BsaJI CCNNGG 3 cut(s) 341, 441, 1308
BsaWI WCCGGW 4 cut(s) 111, 145, 223, 349
Bsc4I CCNNNNNNNGG 3 cut(s) 111, 177, 342
Bse1I ACTGG 1 cut(s) 299
BseBI CCWGG 1 cut(s) 196
BseDI CCNNGG 3 cut(s) 341, 441, 1308
BseGI GGATG 7 cut(s) 87, 101, 171, 330, 597, 751, 1304
BseLI CCNNNNNNNGG 3 cut(s) 111, 177, 342
BseMII CTCAG 2 cut(s) 701, 1242
BseNI ACTGG 1 cut(s) 299
BseRI GAGGAG 4 cut(s) 31, 101, 581, 673
BseSI GKGCMC 2 cut(s) 119, 806
BseXI GCAGC 2 cut(s) 494, 497
Bsh1236I CGCG 3 cut(s) 272, 398, 408
BshFI GGCC 9 cut(s) 29, 395, 440, 521, 578, 615, 804, 1016, 1335
BshNI GGYRCC 1 cut(s) 114
BsiSI CCGG 6 cut(s) 60, 112, 146, 224, 350, 540
BsiWI CGTACG 1 cut(s) 360
BslI CCNNNNNNNGG 3 cut(s) 111, 177, 342
BsmAI GTCTC 1 cut(s) 59
BsmI GAATGC 1 cut(s) 1030
BsnI GGCC 9 cut(s) 29, 395, 440, 521, 578, 615, 804, 1016, 1335
Bsp120I GGGCCC 1 cut(s) 802
Bsp1286I GDGCHC 2 cut(s) 119, 806
Bsp143I GATC 8 cut(s) 90, 142, 198, 285, 570, 629, 676, 730
Bsp19I CCATGG 1 cut(s) 1308
BspACI CCGC 3 cut(s) 310, 396, 408
BspANI GGCC 9 cut(s) 29, 395, 440, 521, 578, 615, 804, 1016, 1335
BspCNI CTCAG 2 cut(s) 702, 1243
BspFNI CGCG 3 cut(s) 272, 398, 408
BspHI TCATGA 1 cut(s) 135
BspLI GGNNCC 4 cut(s) 116, 769, 804, 1121
BspMAI CTGCAG 1 cut(s) 1118
BspMI ACCTGC 1 cut(s) 1204
BspPI GGATC 5 cut(s) 137, 206, 280, 637, 738
BspQI GCTCTTC 1 cut(s) 941
BspT107I GGYRCC 1 cut(s) 114
BsrBI CCGCTC 1 cut(s) 312
BsrI ACTGG 1 cut(s) 299
BssECI CCNNGG 3 cut(s) 341, 441, 1308
BssMI GATC 8 cut(s) 90, 142, 198, 285, 570, 629, 676, 730
BssNI GRCGYC 1 cut(s) 192
BssT1I CCWWGG 2 cut(s) 441, 1308
Bst2UI CCWGG 1 cut(s) 196
Bst4CI ACNGT 1 cut(s) 1295
Bst6I CTCTTC 1 cut(s) 941
BstACI GRCGYC 1 cut(s) 192
BstBAI YACGTR 1 cut(s) 278
BstC8I GCNNGC 3 cut(s) 31, 470, 998
BstDEI CTNAG 3 cut(s) 710, 1061, 1251
BstDSI CCRYGG 1 cut(s) 1308
BstEII GGTNACC 1 cut(s) 226
BstENI CCTNNNNNAGG 1 cut(s) 175
BstF5I GGATG 7 cut(s) 87, 101, 171, 330, 597, 751, 1304
BstFNI CGCG 3 cut(s) 272, 398, 408
BstHHI GCGC 2 cut(s) 274, 1187
BstKTI GATC 8 cut(s) 93, 145, 201, 288, 573, 632, 679, 733
BstMAI GTCTC 1 cut(s) 59
BstMBI GATC 8 cut(s) 90, 142, 198, 285, 570, 629, 676, 730
BstMWI GCNNNNNNNGC 5 cut(s) 318, 327, 776, 830, 928
BstNI CCWGG 1 cut(s) 196
BstNSI RCATGY 1 cut(s) 743
BstPI GGTNACC 1 cut(s) 226
BstSCI CCNGG 1 cut(s) 194
BstSFI CTRYAG 2 cut(s) 819, 1114
BstSLI GKGCMC 2 cut(s) 119, 806
BstSNI TACGTA 1 cut(s) 278
BstUI CGCG 3 cut(s) 272, 398, 408
BstV1I GCAGC 2 cut(s) 494, 497
BstV2I GAAGAC 2 cut(s) 841, 1155
BstX2I RGATCY 4 cut(s) 142, 570, 629, 676
BstYI RGATCY 4 cut(s) 142, 570, 629, 676
BsuRI GGCC 9 cut(s) 29, 395, 440, 521, 578, 615, 804, 1016, 1335
BtgI CCRYGG 1 cut(s) 1308
BtsCI GGATG 7 cut(s) 87, 101, 171, 330, 597, 751, 1304
BveI ACCTGC 1 cut(s) 1204
Cac8I GCNNGC 3 cut(s) 31, 470, 998
CciI TCATGA 1 cut(s) 135
CfoI GCGC 2 cut(s) 274, 1187
Cfr13I GGNCC 5 cut(s) 27, 130, 180, 802, 803
CseI GACGC 2 cut(s) 200, 289
Csp6I GTAC 2 cut(s) 361, 707
CspCI CAANNNNNGTGG 2 cut(s) 876, 911
CviAII CATG 8 cut(s) 76, 136, 391, 588, 740, 856, 1036, 1309
CviQI GTAC 2 cut(s) 361, 707
DdeI CTNAG 3 cut(s) 710, 1061, 1251
DpnI GATC 8 cut(s) 92, 144, 200, 287, 572, 631, 678, 732
DpnII GATC 8 cut(s) 90, 142, 198, 285, 570, 629, 676, 730
DraIII CACNNNGTG 1 cut(s) 322
DrdI GACNNNNNNGTC 1 cut(s) 299
DseDI GACNNNNNNGTC 1 cut(s) 299
EaeI YGGCCR 4 cut(s) 393, 438, 519, 576
Eam1104I CTCTTC 1 cut(s) 941
EarI CTCTTC 1 cut(s) 941
Eco105I TACGTA 1 cut(s) 278
Eco130I CCWWGG 2 cut(s) 441, 1308
Eco147I AGGCCT 1 cut(s) 1016
Eco24I GRGCYC 1 cut(s) 806
Eco47I GGWCC 2 cut(s) 130, 180
Eco91I GGTNACC 1 cut(s) 226
EcoNI CCTNNNNNAGG 1 cut(s) 175
EcoO109I RGGNCCY 2 cut(s) 802, 803
EcoO65I GGTNACC 1 cut(s) 226
EcoRII CCWGG 1 cut(s) 194
EcoT14I CCWWGG 2 cut(s) 441, 1308
EcoT38I GRGCYC 1 cut(s) 806
ErhI CCWWGG 2 cut(s) 441, 1308
FaeI CATG 8 cut(s) 79, 139, 394, 591, 743, 859, 1039, 1312
FatI CATG 8 cut(s) 75, 135, 390, 587, 739, 855, 1035, 1308
FblI GTMKAC 1 cut(s) 158
Fnu4HI GCNGC 4 cut(s) 396, 409, 508, 511
FokI GGATG 7 cut(s) 88, 94, 178, 317, 604, 758, 1291
FriOI GRGCYC 1 cut(s) 806
Fsp4HI GCNGC 4 cut(s) 396, 409, 508, 511
FspBI CTAG 5 cut(s) 71, 372, 428, 807, 923
GlaI GCGC 2 cut(s) 273, 1186
GluI GCNGC 4 cut(s) 396, 409, 508, 511
HaeIII GGCC 9 cut(s) 29, 395, 440, 521, 578, 615, 804, 1016, 1335
HapII CCGG 6 cut(s) 60, 112, 146, 224, 350, 540
HgaI GACGC 2 cut(s) 200, 289
HhaI GCGC 2 cut(s) 274, 1187
Hin1I GRCGYC 1 cut(s) 192
Hin1II CATG 8 cut(s) 79, 139, 394, 591, 743, 859, 1039, 1312
Hin6I GCGC 2 cut(s) 272, 1185
HinP1I GCGC 2 cut(s) 272, 1185
HincII GTYRAC 1 cut(s) 159
HindII GTYRAC 1 cut(s) 159
HindIII AAGCTT 2 cut(s) 623, 831
HinfI GANTC 7 cut(s) 67, 97, 346, 387, 400, 1233, 1301
HpaII CCGG 6 cut(s) 60, 112, 146, 224, 350, 540
HphI GGTGA 5 cut(s) 617, 796, 1142, 1148, 1238
Hpy166II GTNNAC 1 cut(s) 159
Hpy188I TCNGA 6 cut(s) 345, 384, 449, 600, 1194, 1326
Hpy188III TCNNGA 9 cut(s) 71, 94, 128, 136, 202, 304, 428, 864, 888
Hpy8I GTNNAC 1 cut(s) 159
Hpy99I CGWCG 2 cut(s) 163, 194
HpyAV CCTTC 4 cut(s) 18, 43, 605, 974
HpyCH4III ACNGT 1 cut(s) 1295
HpyCH4IV ACGT 3 cut(s) 248, 277, 557
HpyCH4V TGCA 5 cut(s) 635, 941, 996, 1116, 1213
HpyF10VI GCNNNNNNNGC 5 cut(s) 318, 327, 776, 830, 928
HpyF3I CTNAG 3 cut(s) 710, 1061, 1251
HpySE526I ACGT 3 cut(s) 248, 277, 557
Hsp92I GRCGYC 1 cut(s) 192
Hsp92II CATG 8 cut(s) 79, 139, 394, 591, 743, 859, 1039, 1312
HspAI GCGC 2 cut(s) 272, 1185
Kzo9I GATC 8 cut(s) 90, 142, 198, 285, 570, 629, 676, 730
LguI GCTCTTC 1 cut(s) 941
LmnI GCTCC 2 cut(s) 767, 866
Lsp1109I GCAGC 2 cut(s) 494, 497
LweI GCATC 6 cut(s) 195, 339, 736, 918, 928, 1047
MaeI CTAG 5 cut(s) 71, 372, 428, 807, 923
MaeII ACGT 3 cut(s) 248, 277, 557
MaeIII GTNAC 5 cut(s) 148, 226, 367, 473, 1246
MalI GATC 8 cut(s) 92, 144, 200, 287, 572, 631, 678, 732
MbiI CCGCTC 1 cut(s) 312
MboI GATC 8 cut(s) 90, 142, 198, 285, 570, 629, 676, 730
MflI RGATCY 4 cut(s) 142, 570, 629, 676
MhlI GDGCHC 2 cut(s) 119, 806
MlsI TGGCCA 1 cut(s) 440
MluCI AATT 5 cut(s) 792, 899, 1101, 1286, 1337
MluNI TGGCCA 1 cut(s) 440
MlyI GAGTC 2 cut(s) 61, 394
MmeI TCCRAC 1 cut(s) 543
Mox20I TGGCCA 1 cut(s) 440
MroXI GAANNNNTTC 1 cut(s) 1265
MscI TGGCCA 1 cut(s) 440
MseI TTAA 3 cut(s) 1050, 1155, 1317
MslI CAYNNNNRTG 2 cut(s) 80, 744
Msp20I TGGCCA 1 cut(s) 440
MspI CCGG 6 cut(s) 60, 112, 146, 224, 350, 540
MspR9I CCNGG 1 cut(s) 196
Mva1269I GAATGC 1 cut(s) 1030
MvaI CCWGG 1 cut(s) 196
MvnI CGCG 3 cut(s) 272, 398, 408
MwoI GCNNNNNNNGC 5 cut(s) 318, 327, 776, 830, 928
NcoI CCATGG 1 cut(s) 1308
NdeII GATC 8 cut(s) 90, 142, 198, 285, 570, 629, 676, 730
NlaIII CATG 8 cut(s) 79, 139, 394, 591, 743, 859, 1039, 1312
NlaIV GGNNCC 4 cut(s) 116, 769, 804, 1121
NmuCI GTSAC 1 cut(s) 148
NspI RCATGY 1 cut(s) 743
PagI TCATGA 1 cut(s) 135
PceI AGGCCT 1 cut(s) 1016
PciI ACATGT 1 cut(s) 739
PciSI GCTCTTC 1 cut(s) 941
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PctI GAATGC 1 cut(s) 1030
PdmI GAANNNNTTC 1 cut(s) 1265
PfeI GAWTC 5 cut(s) 97, 346, 387, 1233, 1301
Pfl23II CGTACG 1 cut(s) 360
PkrI GCNGC 4 cut(s) 397, 410, 509, 512
PleI GAGTC 2 cut(s) 61, 394
PpsI GAGTC 2 cut(s) 61, 394
Ppu21I YACGTR 1 cut(s) 278
PscI ACATGT 1 cut(s) 739
Psp1406I AACGTT 2 cut(s) 248, 557
Psp6I CCWGG 1 cut(s) 194
PspEI GGTNACC 1 cut(s) 226
PspGI CCWGG 1 cut(s) 194
PspLI CGTACG 1 cut(s) 360
PspN4I GGNNCC 4 cut(s) 116, 769, 804, 1121
PspOMI GGGCCC 1 cut(s) 802
PspPI GGNCC 5 cut(s) 27, 130, 180, 802, 803
PstI CTGCAG 1 cut(s) 1118
PsuI RGATCY 4 cut(s) 142, 570, 629, 676
RsaI GTAC 2 cut(s) 362, 708
RsaNI GTAC 2 cut(s) 361, 707
RseI CAYNNNNRTG 2 cut(s) 80, 744
SalI GTCGAC 1 cut(s) 157
SapI GCTCTTC 1 cut(s) 941
SaqAI TTAA 3 cut(s) 1050, 1155, 1317
SatI GCNGC 4 cut(s) 396, 409, 508, 511
Sau3AI GATC 8 cut(s) 90, 142, 198, 285, 570, 629, 676, 730
Sau96I GGNCC 5 cut(s) 27, 130, 180, 802, 803
SchI GAGTC 2 cut(s) 61, 394
ScrFI CCNGG 1 cut(s) 196
SduI GDGCHC 2 cut(s) 119, 806
SfaNI GCATC 6 cut(s) 195, 339, 736, 918, 928, 1047
SfcI CTRYAG 2 cut(s) 819, 1114
SinI GGWCC 2 cut(s) 130, 180
SmiMI CAYNNNNRTG 2 cut(s) 80, 744
SmlI CTYRAG 1 cut(s) 685
SmoI CTYRAG 1 cut(s) 685
SnaBI TACGTA 1 cut(s) 278
Sse9I AATT 5 cut(s) 792, 899, 1101, 1286, 1337
SseBI AGGCCT 1 cut(s) 1016
SsiI CCGC 3 cut(s) 310, 396, 408
SspMI CTAG 5 cut(s) 71, 372, 428, 807, 923
StuI AGGCCT 1 cut(s) 1016
StyD4I CCNGG 1 cut(s) 194
StyI CCWWGG 2 cut(s) 441, 1308
TaaI ACNGT 1 cut(s) 1295
TaiI ACGT 3 cut(s) 251, 280, 560
TaqI TCGA 5 cut(s) 158, 189, 201, 252, 528
TasI AATT 5 cut(s) 792, 899, 1101, 1286, 1337
TauI GCSGC 2 cut(s) 398, 411
TfiI GAWTC 5 cut(s) 97, 346, 387, 1233, 1301
Tru1I TTAA 3 cut(s) 1050, 1155, 1317
Tru9I TTAA 3 cut(s) 1050, 1155, 1317
TseFI GTSAC 1 cut(s) 148
TseI GCWGC 2 cut(s) 507, 510
Tsp45I GTSAC 1 cut(s) 148
TspDTI ATGAA 3 cut(s) 152, 891, 1293
VpaK11BI GGWCC 2 cut(s) 130, 180
XagI CCTNNNNNAGG 1 cut(s) 175
XbaI TCTAGA 2 cut(s) 70, 427
XceI RCATGY 1 cut(s) 743
XcmI CCANNNNNNNNNTGG 5 cut(s) 238, 623, 778, 1042, 1130
XmiI GTMKAC 1 cut(s) 158
XmnI GAANNNNTTC 1 cut(s) 1265
XspI CTAG 5 cut(s) 71, 372, 428, 807, 923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.