RLG00000010064

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
62592183 .. 62595101
2919 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010064

Sequence Viewer

Length: 2823 bp
ATGTCCAAAGCTACCAGCCTGCATGCAAAATTTGGGAGCATTGAGTTGCCGCTTGATGTTCCCAGCAGTAGTGAAGGAGAAGAATCTCAACCTTCAGCTTCGGTGCCAGCCATTAATGGCTTCAAAGCTGATCAAAAAAGCCTCACTCAGCTAGTGAAGGAGAAAAATCTCAACCAGCTTCTGAAGCTGGGAGGGGTTGAAGAAGTGGCATCAGCTCTCAAAACTGACGCAGTGCACGGAATTAATGGTGATGATGCTGACGACATCGCCTCCAGGCATGAAGCATTTGGTTCCAACACATACAAGAAACCGCCAACACAAGGATTCCTCCATTTTGTGTGGGAAGCCTTCAAAGACCTCACGATCCTAATCCTCTTGGGATGTGCTGCGCTTTCACTTGGTTTCAGCATCAAAGAGCATGGATTGAAAGAAGGTTGGATTGATGGTGGAAGCATTTGTCTCGCGGTCATTCTGGTCATTTCTGTTTCAGCCATAAGCAACTACAGACAGAGCAGACAGTTTGACAAGCTGTCGAAAGTCAGCAACAATCTCCAGATTGAGGCTGTGAGAAATGGAAGGCGCCAACTGATTTCAATATTCGAAATTGTGGTGGGTGACGTCATCTGCTTAAAAATTGGAGATCAAGTTCCAGCAGATGGATTGCTTTTAGATGGCCACTCTTTATCAGTAGATGAATCAAGCATGACAGGGGAGAGCGACCATGTTGAGGTAAGTGTCACTGAGAATCCTTTCTTGTTCTCTGGGACTAAAATAGCCGATGGTTATGGTCGCATGCTTGTCACGTCGGTCGGGATGAACACAAACTGGGGTGAAATGATGAGCCAAATTAGCCAAGACACCAGTGAAAAGACACCTCTACAAGCACGTTTAGACAAGCTAACTTCGTCCATCGGTAAAGTTGGTTTGGCAGTTGCTTTCTTTGTTCTTGTAGTCATGTTGGTCCGGTACTTCACAGGGAATACAGAGGATGAGAATGGAAACAAAGAGTACAATGGCAGCAAGACAAAATCTAATGACATAATAAATGCCGTTATTGGGATTGTAGCAGCTGCAGTTAGAATTGTTGAGGTGGCAATTCCAGAAGGTCTACCATTAGCTGTGACTCTCACTCTTGCTTATTCCATGAAGAGAATGATGGGTGATAACGCAATGGTGCGGAAGCTCTCTGCTTGTGAGACCATGGGATCTGCTACAACAATTTGTACTGACAAAACAGGTACTCTGACCACGAACCAGATGAAGGTGACAAAGTTTTGGTTGGGGAAAGAATCTGTGGAAGAAGAAGCTTATTCATCTATCTCTCCTTATGTTCTCGACTTGATCCAAGAAGGGGTTGCTCTTAATACAACTGGTGGTGTGTACAGGCCTAGCTTGGATTCTGAAATTGAGATCTTATGCAGTCCAACTGAAAAGGCTATTCTTTCATGGGCGGTACATGGGTCGAACATGGATATGGAGAAAGTCGTGAAGAGTAGTAGCATTCTCAACGTTGAAGCCTTTAATTCGAAGAAGAAACAGAGTGGAGTTCTGGTGAAGAGAAAGGCTGACAGCTCAGTCCATGTACACTGGAAAGGAGCAGCAGAGATGATACTAGCAATGTGCACAAGTTACTACAATGCCTCTGGAGTTGTCAAGGATATGGATACAAATGAAAAAAGGAACTTTGAGCAAATTATTCAAGGTATGGCAGCTAGCAGCCTCAGATGCATAGCATTCGCACATAAACAAGTTCCCACTGAAGAGCGACTAAATGCAGACCAGAAAGTTGTGCTAAAGGAAGATGGATTGACCCTATTGGGAGTTGTCGGTCTTACAGATCCATGTCGTCCCGATGTGAAGAAAGCAGTTGAAGAATGCCAATATGCAGGGGTGAACGTCAAAATGATTACCGGCGACAATGTTTTCACTGCACAAGCCATAGCCACTAAATGTGGGATACTCAGGCCTGGTCAAGACATGCTTGGAGCAGTGATAGAAGGTATGGAATTTCGCAACTACACGCCAGAACAGAGAATGGAGAAAGTTGAGAAAATTTGTGTGATGGCAAGGTCTTCTCCTTTTGATAAGCTTCTAATGGTGCAATGCTTGAAACAGAAAGGTCATGTAGTTGCAGTGACGGGTGATGGCACTAATGATGCCCCGGCATTGAAAGAAGCTGATATAGGACTTTCCATGGAGATTCAAGGCACAGAAGTTGCCAAGGAAAGCTCAGATATTGTGATCATGGATGATAACTTTGCTTCAGTTGCTACAGTTTTGATGTGGGGAAGATGTGTCTACAATAATATCCAAAAGTTCATCCAATTCCAACTCACCGTCAATGTTGCAGCTCTTGTGATCAACTTTGTTACAGCAGTTTATTCGGGTCAAGTCCTATTAACAGAAGTTCAGTTATTGTATGTCGCCTTGATCATGGACACACTTGGAGCTCTTGCTCTTGCCACAGAAAAACCCACAAGAGAACTTTTGGAGAAGCCACCAGTGGGAAGGACGGCACCTCTAATCACAAACATCATGTGGAGGAATCTCTTGCCTCAAGCACTGTACCAAATAATAGTTTTCAATGTGTTCAATGCAAGGAAGCTAGAGAAGAAGAATGTCTTCAAGGGAATACATACCAATAAATTGTTTATGGGGATCATTGCAGTGACAATTGTTCTTCAGGTCGTGATGGTGGAGGTTCTCAAGAAATTTGCAGATACAGAGAGGTTGAACTGGGGACAATGGGGTGTATGCATTGGGATTGCTGTCATCTCTTGGCCAATTGGTTGGCTAGTCAAGTCTATACCTGTTCCAGAGTAA

Protein Analysis

941

Amino Acids

102.42

Weight (kDa)

5.81

Isoelectric Point (pI)

30.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 63 - 132 5.9e-14 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 188 - 283 1.4e-20 P-type ATPase actuator domain
Cation_ATPase PF13246 446 - 617 1e-26 P-type ATPase, cytoplasmic domain N
Hydrolase PF00702 587 - 727 1.1e-12 haloacid dehalogenase-like hydrolase
Cation_ATPase_C PF00689 798 - 860 7e-14 Cation transporting ATPase, C-terminus
Cation_ATPase_C PF00689 860 - 935 5.1e-15 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1574
AatII GACGTC 1 cut(s) 621
AccB1I GGYRCC 3 cut(s) 103, 579, 2515
AccB7I CCANNNNNTGG 1 cut(s) 656
AccI GTMKAC 2 cut(s) 1108, 2298
AccII CGCG 1 cut(s) 464
AciI CCGC 5 cut(s) 50, 311, 464, 1177, 1451
AclI AACGTT 1 cut(s) 1509
AclWI GGATC 5 cut(s) 358, 1213, 1336, 1832, 2666
AcoI YGGCCR 2 cut(s) 673, 2780
AcsI RAATTY 4 cut(s) 29, 2006, 2052, 2711
AcuI CTGAAG 5 cut(s) 78, 203, 1779, 2247, 2666
AcyI GRCGYC 2 cut(s) 580, 618
AfaI GTAC 8 cut(s) 968, 1010, 1225, 1240, 1382, 1455, 1584, 2567
AfiI CCNNNNNNNGG 8 cut(s) 320, 559, 656, 727, 1056, 1261, 1351, 2504
AhdI GACNNNNNGTC 1 cut(s) 529
AjiI CACGTC 1 cut(s) 804
AjnI CCWGG 2 cut(s) 272, 1966
AloI GAACNNNNNNTCC 2 cut(s) 630, 662
Alw21I GWGCWC 3 cut(s) 237, 1625, 2452
Alw26I GTCTC 2 cut(s) 464, 1190
Alw44I GTGCAC 2 cut(s) 233, 1621
AlwI GGATC 5 cut(s) 358, 1213, 1336, 1832, 2666
AlwNI CAGNNNCTG 1 cut(s) 181
AoxI GGCC 4 cut(s) 673, 1385, 1964, 2780
ApaLI GTGCAC 2 cut(s) 233, 1621
ApeKI GCWGC 8 cut(s) 386, 1017, 1067, 1070, 1598, 1709, 1716, 2348
ApoI RAATTY 4 cut(s) 29, 2006, 2052, 2711
AseI ATTAAT 2 cut(s) 114, 243
Asp700I GAANNNNTTC 2 cut(s) 749, 2621
AspLEI GCGC 2 cut(s) 391, 582
AspS9I GGNCC 1 cut(s) 961
AsuC2I CCSGG 1 cut(s) 2162
AsuHPI GGTGA 9 cut(s) 260, 626, 842, 1172, 1276, 1564, 1903, 2153, 2326
AsuII TTCGAA 2 cut(s) 600, 1526
AsuNHI GCTAGC 1 cut(s) 1712
AvaII GGWCC 1 cut(s) 961
BaeGI GKGCMC 2 cut(s) 237, 1625
BaeI ACNNNNGTAYC 2 cut(s) 1445, 1478
BalI TGGCCA 2 cut(s) 675, 2782
BanI GGYRCC 3 cut(s) 103, 579, 2515
BanII GRGCYC 1 cut(s) 2452
BbsI GAAGAC 2 cut(s) 2064, 2614
Bbv12I GWGCWC 3 cut(s) 237, 1625, 2452
BbvI GCAGC 8 cut(s) 373, 1029, 1057, 1079, 1610, 1721, 1728, 2360
BceAI ACGGC 2 cut(s) 1034, 2529
BcgI CGANNNNNNTGC 6 cut(s) 442, 476, 1717, 1751, 2364, 2398
BciT130I CCWGG 2 cut(s) 274, 1968
BciVI GTATCC 2 cut(s) 1657, 1950
BclI TGATCA 4 cut(s) 130, 2241, 2358, 2430
BcnI CCSGG 1 cut(s) 2162
BcoDI GTCTC 2 cut(s) 464, 1190
BfaI CTAG 6 cut(s) 152, 1389, 1613, 1713, 2606, 2795
BfmI CTRYAG 3 cut(s) 502, 1071, 2271
BfoI RGCGCY 1 cut(s) 583
BfuI GTATCC 2 cut(s) 1657, 1950
BglII AGATCT 1 cut(s) 1410
BisI GCNGC 9 cut(s) 50, 387, 1018, 1068, 1071, 1599, 1710, 1717, 2349
BlsI GCNGC 9 cut(s) 51, 388, 1019, 1069, 1072, 1600, 1711, 1718, 2350
Bme1390I CCNGG 3 cut(s) 274, 1968, 2162
Bme18I GGWCC 1 cut(s) 961
BmeRI GACNNNNNGTC 1 cut(s) 529
BmgBI CACGTC 1 cut(s) 804
BmgT120I GGNCC 1 cut(s) 961
BmiI GGNNCC 4 cut(s) 105, 292, 581, 2517
BmrFI CCNGG 3 cut(s) 274, 1968, 2162
BmrI ACTGGG 2 cut(s) 835, 2746
BmsI GCATC 5 cut(s) 218, 244, 417, 1715, 2146
BmtI GCTAGC 1 cut(s) 1716
BmuI ACTGGG 2 cut(s) 835, 2746
BpiI GAAGAC 2 cut(s) 2064, 2614
BpmI CTGGAG 3 cut(s) 256, 536, 1665
Bpu14I TTCGAA 2 cut(s) 600, 1526
BpuEI CTTGAG 2 cut(s) 2541, 2690
BpuMI CCSGG 1 cut(s) 2162
BsaBI GATNNNNATC 1 cut(s) 368
BsaHI GRCGYC 2 cut(s) 580, 618
BsaI GGTCTC 1 cut(s) 1190
BsaJI CCNNGG 4 cut(s) 1200, 2160, 2193, 2220
BsaWI WCCGGW 1 cut(s) 963
BsaXI ACNNNNNCTCC 6 cut(s) 254, 284, 630, 660, 1536, 1566
Bsc4I CCNNNNNNNGG 8 cut(s) 320, 559, 656, 727, 1056, 1261, 1351, 2504
Bse118I RCCGGY 1 cut(s) 1910
Bse1I ACTGG 6 cut(s) 830, 861, 1375, 1592, 2501, 2741
Bse3DI GCAATG 4 cut(s) 1176, 1623, 2108, 2661
Bse8I GATNNNNATC 1 cut(s) 368
BseBI CCWGG 2 cut(s) 274, 1968
BseDI CCNNGG 4 cut(s) 1200, 2160, 2193, 2220
BseGI GGATG 5 cut(s) 386, 819, 994, 2254, 2319
BseJI GATNNNNATC 1 cut(s) 368
BseLI CCNNNNNNNGG 8 cut(s) 320, 559, 656, 727, 1056, 1261, 1351, 2504
BseMI GCAATG 4 cut(s) 1176, 1623, 2108, 2661
BseMII CTCAG 6 cut(s) 161, 732, 1587, 1735, 1975, 2244
BseNI ACTGG 6 cut(s) 830, 861, 1375, 1592, 2501, 2741
BseSI GKGCMC 2 cut(s) 237, 1625
BseXI GCAGC 8 cut(s) 373, 1029, 1057, 1079, 1610, 1721, 1728, 2360
BseYI CCCAGC 2 cut(s) 62, 187
BsgI GTGCAG 1 cut(s) 1914
Bsh1236I CGCG 1 cut(s) 464
Bsh1285I CGRYCG 1 cut(s) 810
BshFI GGCC 4 cut(s) 675, 1387, 1966, 2782
BshNI GGYRCC 3 cut(s) 103, 579, 2515
BsiEI CGRYCG 1 cut(s) 810
BsiHKAI GWGCWC 3 cut(s) 237, 1625, 2452
BsiSI CCGG 3 cut(s) 964, 1911, 2162
BslFI GGGAC 3 cut(s) 778, 1833, 2754
BslI CCNNNNNNNGG 8 cut(s) 320, 559, 656, 727, 1056, 1261, 1351, 2504
BsmAI GTCTC 2 cut(s) 464, 1190
BsmFI GGGAC 3 cut(s) 778, 1833, 2754
BsmI GAATGC 3 cut(s) 1500, 1733, 1880
BsnI GGCC 4 cut(s) 675, 1387, 1966, 2782
Bso31I GGTCTC 1 cut(s) 1190
Bsp119I TTCGAA 2 cut(s) 600, 1526
Bsp1286I GDGCHC 3 cut(s) 237, 1625, 2452
Bsp1407I TGTACA 2 cut(s) 1380, 1582
Bsp19I CCATGG 2 cut(s) 1200, 2193
BspACI CCGC 5 cut(s) 50, 311, 464, 1177, 1451
BspANI GGCC 4 cut(s) 675, 1387, 1966, 2782
BspCNI CTCAG 6 cut(s) 160, 733, 1586, 1734, 1974, 2243
BspFNI CGCG 1 cut(s) 464
BspLI GGNNCC 4 cut(s) 105, 292, 581, 2517
BspMAI CTGCAG 1 cut(s) 1075
BspOI GCTAGC 1 cut(s) 1716
BspPI GGATC 5 cut(s) 358, 1213, 1336, 1832, 2666
BspQI GCTCTTC 1 cut(s) 1755
BspT104I TTCGAA 2 cut(s) 600, 1526
BspT107I GGYRCC 3 cut(s) 103, 579, 2515
BspTNI GGTCTC 1 cut(s) 1190
BsrDI GCAATG 4 cut(s) 1176, 1623, 2108, 2661
BsrFI RCCGGY 1 cut(s) 1910
BsrGI TGTACA 2 cut(s) 1380, 1582
BsrI ACTGG 6 cut(s) 830, 861, 1375, 1592, 2501, 2741
BssAI RCCGGY 1 cut(s) 1910
BssECI CCNNGG 4 cut(s) 1200, 2160, 2193, 2220
BssNI GRCGYC 2 cut(s) 580, 618
BssT1I CCWWGG 3 cut(s) 1200, 2193, 2220
Bst2UI CCWGG 2 cut(s) 274, 1968
Bst4CI ACNGT 4 cut(s) 519, 2275, 2338, 2565
Bst6I CTCTTC 4 cut(s) 1142, 1484, 1550, 1755
BstACI GRCGYC 2 cut(s) 580, 618
BstAUI TGTACA 2 cut(s) 1380, 1582
BstBI TTCGAA 2 cut(s) 600, 1526
BstC8I GCNNGC 5 cut(s) 20, 24, 108, 794, 1714
BstDEI CTNAG 6 cut(s) 147, 741, 1573, 1721, 1961, 2230
BstDSI CCRYGG 2 cut(s) 1200, 2193
BstF5I GGATG 5 cut(s) 386, 819, 994, 2254, 2319
BstFNI CGCG 1 cut(s) 464
BstH2I RGCGCY 1 cut(s) 583
BstHHI GCGC 2 cut(s) 391, 582
BstMAI GTCTC 2 cut(s) 464, 1190
BstMCI CGRYCG 1 cut(s) 810
BstMWI GCNNNNNNNGC 4 cut(s) 184, 849, 1725, 2267
BstNI CCWGG 2 cut(s) 274, 1968
BstNSI RCATGY 3 cut(s) 26, 796, 1981
BstSCI CCNGG 3 cut(s) 272, 1966, 2160
BstSFI CTRYAG 3 cut(s) 502, 1071, 2271
BstSLI GKGCMC 2 cut(s) 237, 1625
BstUI CGCG 1 cut(s) 464
BstV1I GCAGC 8 cut(s) 373, 1029, 1057, 1079, 1610, 1721, 1728, 2360
BstV2I GAAGAC 2 cut(s) 2064, 2614
BstX2I RGATCY 3 cut(s) 1205, 1410, 1837
BstXI CCANNNNNNTGG 1 cut(s) 2790
BstYI RGATCY 3 cut(s) 1205, 1410, 1837
BsuI GTATCC 2 cut(s) 1657, 1950
BsuRI GGCC 4 cut(s) 675, 1387, 1966, 2782
BtgI CCRYGG 2 cut(s) 1200, 2193
BtgZI GCGATG 1 cut(s) 250
BtrI CACGTC 1 cut(s) 804
BtsCI GGATG 5 cut(s) 386, 819, 994, 2254, 2319
BtsI GCAGTG 5 cut(s) 237, 1926, 1995, 2139, 2673
Cac8I GCNNGC 5 cut(s) 20, 24, 108, 794, 1714
CaiI CAGNNNCTG 1 cut(s) 181
CfoI GCGC 2 cut(s) 391, 582
Cfr10I RCCGGY 1 cut(s) 1910
Cfr13I GGNCC 1 cut(s) 961
CseI GACGC 1 cut(s) 236
Csp6I GTAC 8 cut(s) 967, 1009, 1224, 1239, 1381, 1454, 1583, 2566
CviQI GTAC 8 cut(s) 967, 1009, 1224, 1239, 1381, 1454, 1583, 2566
DdeI CTNAG 6 cut(s) 147, 741, 1573, 1721, 1961, 2230
DinI GGCGCC 1 cut(s) 581
DrdI GACNNNNNNGTC 1 cut(s) 1574
DriI GACNNNNNGTC 1 cut(s) 529
DseDI GACNNNNNNGTC 1 cut(s) 1574
EaeI YGGCCR 2 cut(s) 673, 2780
Eam1104I CTCTTC 4 cut(s) 1142, 1484, 1550, 1755
Eam1105I GACNNNNNGTC 1 cut(s) 529
EarI CTCTTC 4 cut(s) 1142, 1484, 1550, 1755
Ecl136II GAGCTC 1 cut(s) 2450
Eco130I CCWWGG 3 cut(s) 1200, 2193, 2220
Eco147I AGGCCT 2 cut(s) 1387, 1966
Eco24I GRGCYC 1 cut(s) 2452
Eco31I GGTCTC 1 cut(s) 1190
Eco47I GGWCC 1 cut(s) 961
Eco53kI GAGCTC 1 cut(s) 2450
Eco57I CTGAAG 5 cut(s) 78, 203, 1779, 2247, 2666
EcoICRI GAGCTC 1 cut(s) 2450
EcoRII CCWGG 2 cut(s) 272, 1966
EcoT14I CCWWGG 3 cut(s) 1200, 2193, 2220
EcoT22I ATGCAT 2 cut(s) 1730, 2759
EcoT38I GRGCYC 1 cut(s) 2452
EgeI GGCGCC 1 cut(s) 581
EheI GGCGCC 1 cut(s) 581
ErhI CCWWGG 3 cut(s) 1200, 2193, 2220
FalI AAGNNNNNCTT 4 cut(s) 1965, 1997, 2606, 2638
FaqI GGGAC 3 cut(s) 778, 1833, 2754
FbaI TGATCA 4 cut(s) 130, 2241, 2358, 2430
FblI GTMKAC 2 cut(s) 1108, 2298
Fnu4HI GCNGC 9 cut(s) 50, 387, 1018, 1068, 1071, 1599, 1710, 1717, 2349
FokI GGATG 5 cut(s) 393, 826, 1001, 2261, 2306
FriOI GRGCYC 1 cut(s) 2452
Fsp4HI GCNGC 9 cut(s) 50, 387, 1018, 1068, 1071, 1599, 1710, 1717, 2349
FspBI CTAG 6 cut(s) 152, 1389, 1613, 1713, 2606, 2795
GlaI GCGC 2 cut(s) 390, 581
GluI GCNGC 9 cut(s) 50, 387, 1018, 1068, 1071, 1599, 1710, 1717, 2349
GsaI CCCAGC 2 cut(s) 66, 191
GsuI CTGGAG 3 cut(s) 256, 536, 1665
HaeII RGCGCY 1 cut(s) 583
HaeIII GGCC 4 cut(s) 675, 1387, 1966, 2782
HapII CCGG 3 cut(s) 964, 1911, 2162
HgaI GACGC 1 cut(s) 236
HhaI GCGC 2 cut(s) 391, 582
Hin1I GRCGYC 2 cut(s) 580, 618
Hin6I GCGC 2 cut(s) 389, 580
HinP1I GCGC 2 cut(s) 389, 580
HindIII AAGCTT 2 cut(s) 1305, 2087
HinfI GANTC 9 cut(s) 83, 324, 695, 745, 1123, 1289, 1397, 2200, 2545
HpaII CCGG 3 cut(s) 964, 1911, 2162
HphI GGTGA 9 cut(s) 260, 626, 842, 1172, 1276, 1564, 1903, 2153, 2326
Hpy166II GTNNAC 7 cut(s) 235, 1109, 1381, 1585, 1623, 1894, 2299
Hpy188I TCNGA 5 cut(s) 183, 1245, 1402, 1724, 2233
Hpy8I GTNNAC 7 cut(s) 235, 1109, 1381, 1585, 1623, 1894, 2299
Hpy99I CGWCG 1 cut(s) 808
HpyCH4III ACNGT 4 cut(s) 519, 2275, 2338, 2565
HpyCH4IV ACGT 5 cut(s) 618, 803, 886, 1509, 1896
HpyF10VI GCNNNNNNNGC 4 cut(s) 184, 849, 1725, 2267
HpyF3I CTNAG 6 cut(s) 147, 741, 1573, 1721, 1961, 2230
HpySE526I ACGT 5 cut(s) 618, 803, 886, 1509, 1896
Hsp92I GRCGYC 2 cut(s) 580, 618
HspAI GCGC 2 cut(s) 389, 580
KasI GGCGCC 1 cut(s) 579
Ksp22I TGATCA 4 cut(s) 130, 2241, 2358, 2430
LguI GCTCTTC 1 cut(s) 1755
LmnI GCTCC 4 cut(s) 36, 1595, 1985, 2447
Lsp1109I GCAGC 8 cut(s) 373, 1029, 1057, 1079, 1610, 1721, 1728, 2360
LweI GCATC 5 cut(s) 218, 244, 417, 1715, 2146
MaeI CTAG 6 cut(s) 152, 1389, 1613, 1713, 2606, 2795
MaeII ACGT 5 cut(s) 618, 803, 886, 1509, 1896
MaeIII GTNAC 9 cut(s) 614, 736, 799, 1120, 1264, 1628, 2134, 2368, 2668
MfeI CAATTG 2 cut(s) 2673, 2784
MflI RGATCY 3 cut(s) 1205, 1410, 1837
MhlI GDGCHC 3 cut(s) 237, 1625, 2452
MlsI TGGCCA 2 cut(s) 675, 2782
MluNI TGGCCA 2 cut(s) 675, 2782
Mly113I GGCGCC 1 cut(s) 580
MlyI GAGTC 1 cut(s) 1117
MmeI TCCRAC 4 cut(s) 318, 416, 1448, 2353
Mox20I TGGCCA 2 cut(s) 675, 2782
Mph1103I ATGCAT 2 cut(s) 1730, 2759
MroXI GAANNNNTTC 2 cut(s) 749, 2621
MscI TGGCCA 2 cut(s) 675, 2782
MseI TTAA 6 cut(s) 114, 243, 629, 1362, 1521, 2399
MslI CAYNNNNRTG 2 cut(s) 1472, 2666
Msp20I TGGCCA 2 cut(s) 675, 2782
MspA1I CMGCKG 1 cut(s) 1070
MspI CCGG 3 cut(s) 964, 1911, 2162
MspR9I CCNGG 3 cut(s) 274, 1968, 2162
MunI CAATTG 2 cut(s) 2673, 2784
Mva1269I GAATGC 3 cut(s) 1500, 1733, 1880
MvaI CCWGG 2 cut(s) 274, 1968
MvnI CGCG 1 cut(s) 464
MwoI GCNNNNNNNGC 4 cut(s) 184, 849, 1725, 2267
NarI GGCGCC 1 cut(s) 580
NciI CCSGG 1 cut(s) 2162
NcoI CCATGG 2 cut(s) 1200, 2193
NheI GCTAGC 1 cut(s) 1712
NlaIV GGNNCC 4 cut(s) 105, 292, 581, 2517
NmuCI GTSAC 7 cut(s) 614, 736, 799, 1120, 1264, 2134, 2668
NsiI ATGCAT 2 cut(s) 1730, 2759
NspI RCATGY 3 cut(s) 26, 796, 1981
NspV TTCGAA 2 cut(s) 600, 1526
PaeI GCATGC 2 cut(s) 26, 796
PceI AGGCCT 2 cut(s) 1387, 1966
PciSI GCTCTTC 1 cut(s) 1755
PctI GAATGC 3 cut(s) 1500, 1733, 1880
PdmI GAANNNNTTC 2 cut(s) 749, 2621
PfeI GAWTC 8 cut(s) 83, 324, 695, 745, 1289, 1397, 2200, 2545
PflMI CCANNNNNTGG 1 cut(s) 656
PkrI GCNGC 9 cut(s) 51, 388, 1019, 1069, 1072, 1600, 1711, 1718, 2350
PleI GAGTC 1 cut(s) 1117
PluTI GGCGCC 1 cut(s) 583
PpsI GAGTC 1 cut(s) 1117
PshBI ATTAAT 2 cut(s) 114, 243
Psp124BI GAGCTC 1 cut(s) 2452
Psp1406I AACGTT 1 cut(s) 1509
Psp6I CCWGG 2 cut(s) 272, 1966
PspFI CCCAGC 2 cut(s) 62, 187
PspGI CCWGG 2 cut(s) 272, 1966
PspN4I GGNNCC 4 cut(s) 105, 292, 581, 2517
PspPI GGNCC 1 cut(s) 961
PstI CTGCAG 1 cut(s) 1075
PstNI CAGNNNCTG 1 cut(s) 181
PsuI RGATCY 3 cut(s) 1205, 1410, 1837
PvuII CAGCTG 1 cut(s) 1070
RsaI GTAC 8 cut(s) 968, 1010, 1225, 1240, 1382, 1455, 1584, 2567
RsaNI GTAC 8 cut(s) 967, 1009, 1224, 1239, 1381, 1454, 1583, 2566
RseI CAYNNNNRTG 2 cut(s) 1472, 2666
SacI GAGCTC 1 cut(s) 2452
SapI GCTCTTC 1 cut(s) 1755
SaqAI TTAA 6 cut(s) 114, 243, 629, 1362, 1521, 2399
SatI GCNGC 9 cut(s) 50, 387, 1018, 1068, 1071, 1599, 1710, 1717, 2349
Sau96I GGNCC 1 cut(s) 961
SchI GAGTC 1 cut(s) 1117
ScrFI CCNGG 3 cut(s) 274, 1968, 2162
SduI GDGCHC 3 cut(s) 237, 1625, 2452
SfaNI GCATC 5 cut(s) 218, 244, 417, 1715, 2146
SfcI CTRYAG 3 cut(s) 502, 1071, 2271
SfoI GGCGCC 1 cut(s) 581
SfuI TTCGAA 2 cut(s) 600, 1526
SinI GGWCC 1 cut(s) 961
SmiMI CAYNNNNRTG 2 cut(s) 1472, 2666
SmlI CTYRAG 2 cut(s) 2556, 2705
SmoI CTYRAG 2 cut(s) 2556, 2705
SphI GCATGC 2 cut(s) 26, 796
SseBI AGGCCT 2 cut(s) 1387, 1966
SsiI CCGC 5 cut(s) 50, 311, 464, 1177, 1451
SspDI GGCGCC 1 cut(s) 579
SspI AATATT 1 cut(s) 597
SspMI CTAG 6 cut(s) 152, 1389, 1613, 1713, 2606, 2795
SstI GAGCTC 1 cut(s) 2452
StuI AGGCCT 2 cut(s) 1387, 1966
StyD4I CCNGG 3 cut(s) 272, 1966, 2160
StyI CCWWGG 3 cut(s) 1200, 2193, 2220
TaaI ACNGT 4 cut(s) 519, 2275, 2338, 2565
TaiI ACGT 5 cut(s) 621, 806, 889, 1512, 1899
TaqI TCGA 5 cut(s) 533, 600, 1335, 1463, 1526
TaqII GACCGA 2 cut(s) 796, 1817
TatI WGTACW 4 cut(s) 1008, 1223, 1380, 1582
TauI GCSGC 1 cut(s) 52
TfiI GAWTC 8 cut(s) 83, 324, 695, 745, 1289, 1397, 2200, 2545
Tru1I TTAA 6 cut(s) 114, 243, 629, 1362, 1521, 2399
Tru9I TTAA 6 cut(s) 114, 243, 629, 1362, 1521, 2399
TseFI GTSAC 7 cut(s) 614, 736, 799, 1120, 1264, 2134, 2668
TseI GCWGC 8 cut(s) 386, 1017, 1067, 1070, 1598, 1709, 1716, 2348
Tsp45I GTSAC 7 cut(s) 614, 736, 799, 1120, 1264, 2134, 2668
TspDTI ATGAA 9 cut(s) 294, 708, 830, 1160, 1274, 1302, 1434, 1686, 2308
TspGWI ACGGA 1 cut(s) 252
Van91I CCANNNNNTGG 1 cut(s) 656
VneI GTGCAC 2 cut(s) 233, 1621
VpaK11BI GGWCC 1 cut(s) 961
VspI ATTAAT 2 cut(s) 114, 243
XapI RAATTY 4 cut(s) 29, 2006, 2052, 2711
XceI RCATGY 3 cut(s) 26, 796, 1981
XmiI GTMKAC 2 cut(s) 1108, 2298
XmnI GAANNNNTTC 2 cut(s) 749, 2621
XspI CTAG 6 cut(s) 152, 1389, 1613, 1713, 2606, 2795
ZraI GACGTC 1 cut(s) 619
Zsp2I ATGCAT 2 cut(s) 1730, 2759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.