Rw4G001490

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Reverse (-)
2733684 .. 2736805
3122 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G001490.1

Sequence Viewer

Length: 3093 bp
ATGAGTAGGTCAACCTTCAGTGCCCTGCATGAAAAATTGCGAAGCAATGTTGGGTTGATTCTTGATGTTCCGAGCAGTAGTCTTGGCATAAGCAAAAGAAAATGGCATTCTGCTTTCATTACCATCTATTGCTCTAGAGCTTTCCTCTCTTTACGACCTTCTACTCTTCCCAAACATACCAACTCCACATTCATATCTCCCACACTCTCTTACTCCATTGTTAGGGTCGAGCCAGTCTCGGTCCCAGCCATTAATGGATTCAAAGCAGACCAAAAAAGCCTCACTGAGCTTGTGAAGGAGAAAAATTTCAAGGAGCTCTTGGAGCTTGGAGGGATTGAAGAAGTAGCATCAGCTCTCAAAACTGATGCAGAGCATGGAATCAATGGTGATGATGCAGAAGACATTGCGCGCAGACACGAAGCATTTGGTTCCAACACATATAAGAAACCGCCAACGCAAGGATTCCTCCATTTTGTGTGGGAAGCCTTCAAAGACCTCACAATCCTAATCCTCTTGGGATGTGCTGCGCTTTCTCTTGGTTTCGGCATCAAAGAACATGGATTGAAAGACGGTTGGATTGACGGTGGAAGCATTTGTCTCGCAGTCATTCTGGTCATTTCTGTTTCAGCCATTAGCAACTACAGACAGAGTCGACAATTTGACAAATTGTCCAAGGTCAGTAACAATCTCCAAATTGAGGCTGTGAGAAATGGAAGGCGCCAACAGATTTCAATATTTGAAATTGTGGTTGGTGATGTCATCTGCTTGAAGATTGGAGATCAAATACCAGCAGATGGATTGCTTCTAGACGGCCATTCTTTATCAGTAGATGAATCAAGCATGACAGGGGAGAGCGACCATGTTGAGATAAGTGTCACTGAGAATCCTTTCTTGTTCTCTGGGACTAAAATCGCTAATGGTTACGGTCGCATGCTCGTCACGTCAGTCGGGATGAACACGAACTGGGGTGAAATGATGAGCCAAATCAGCCAAGACACCAGTGAAAAGACACCTCTGCAAGCACGTTTAGACAAGCTAACTTCTTCGATAGGTAAAGTGGGTTTAGCAGTTGCTTTCTTTGTTCTTGTAGTCATGTTGGTCCGATACTTCACTGGGAATACAGAGGATGAGAATGGAAACAAGGAGTACAATGGAAGCAAAACAAAGTCTGATGACATAATAAATGCTGTCATTGGGATTGTAGCAGCTGCTGTTACAATTGTTGTGGTGGCAATTCCAGAAGGTCTACCATTAGCTGTGACTCTCACTCTTGCTTATTCCATGAAGAGAATGATGGTCGATAATGCAATGGTACGGAAGCTCTCTGCTTGTGAGACCATGGGATCTGCTACAACAATTTGTACTGACAAAACAGGTACTCTGACCATGAACCAGATGAAGGTGACTAAGTTTTGGTTGGGGAAAGAATGTGTGGAAGAAGAAGCTTATTCATCTATTTCTCCTTATGTTCTCGACTTGATCCAAGAAGGGGTTGCTCTTAATACAACTGGTGGTGTGTACAGGCCTAGCTTGGATTCTGAAATTGAGATCTCAGGCAGTCCAACAGAAAAGGCTATTCTTTCATGGGCGGTACATGGGTCGAACATGGATATGGAGAAAGTCGTGAAGTGTTGTAGCATTCTCCACGTTGAAGCCTTTAATTCAAAGAAGAAACAGAGTGGAGTGCTGGTGAAGAGAAAGGCTGATAACTCAATCCATGTACACTGGAAAGGGGCAGCAGAGATGATACTAGCAATGTGCACTAGTTACTACAATGCCTCTGGAGTTAACTTTGAGCAGATTATTCAAGGTATGGCAGCTAGCAGCCTCAGATGCATAGCATTCGCACATAAACAAGTTCCCACTGAAGAGCGACTAAATGCAGACCAGAAAGTTGTGCTAAAGGAAGATGGATTGACCCTATTGGGAGTTGTCGGTCTTAAAGACCCATGTCGTCCCGGTGTGAAGAAAGCAGTTGAAGAATGCCAATATGCAGGGGTGAACGTCAAAATGATTACCGGCGACAATGTTTTCACTGCAAAAGCCATAGCCACTGAATGTGGAATACTCAGGCCTGGTCAAGACATGCTTGGAGCAGTGATAGAAGGTGTGGAATTTCGCAACTACACGCCAGAACAGAGAATGGAGAAAGTTGAGAAAATTTGTGTGATGGCTAGGTCTTCTCCTTTTGATAAGCTTCTAATGGTGCAATGCTTGAAACAGAAAGGTCATGTAGTTGCAGTGACGGGTGATGGCACTAATGATGCACCGGCATTGAAAGAAGCTGATATAGGACTTTCCATGGGGATTCAAGGCACAGAAGTTGCCAAGGAAAGCTCAGATATTGTGATCATGGATGATAACTTTGCTTCAGTTGCTACAGTTTTGATGTGGGGAAGATGTGTCTACAATAATATCCAGAAGTTCATCCAATTCCAACTCACCGTCAATGTTGCTGCTCTTGTGATCAACTTTGTGGCAGCAGTTTCAGCAGGTCAAGTCCCATTAACAGCAGTTCAATTATTGTGGGTAAACTTGATCATGGACACACTTGGAGCTCTTGCTCTTGCCACAGAAAAACCCACAAAAGAACTTATGGAGAAGCCACCAGTGGGAAGGACAACGCCTCTCATCACAAACATCATGTGGAGGAACCTCTTGCCTCAAGCTCTGTACCAGATAACTGTCCTCTTGATCTTACAATTCAGGGGCAAAGCAATCTTCGGTGTCAGTGATAAGGTAAAGGACACATTGATCTTCAACACTTTTGTGCTTTGCCAGATATTTAATGAGTTCAATGCAAGAAAGCTAGAGAAGAAGAATGTCTTCAAGGGAATACACACCAACAAGCTGTTTATGGGGATCATCGCGGTGACAATTGTTCTTCAGGTTGTGATGGTGGAGGTTCTCAAGAAATTTGCAGATACAGAGAGGCTGAATTGGGGACAATGGGGTGTCTGCATTGGGATTGCAGTCATCTCTTGGCCAATTGGTTGGCTAGTCAAGTGTATCCCCGTTCCAGAGAAACCCATATTCAGTTATCTGAAAATGAAGAAAAATAAGTATTCTGTTTCAAATAAACTGGCCGGATAA

Protein Analysis

1030

Amino Acids

112.75

Weight (kDa)

8.29

Isoelectric Point (pI)

31.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 109 - 178 8.9e-15 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 234 - 329 4.2e-21 P-type ATPase actuator domain
Hydrolase PF00702 452 - 763 1.4e-14 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 492 - 653 3.5e-21 P-type ATPase, cytoplasmic domain N
Cation_ATPase_C PF00689 834 - 1003 1.7e-48 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2483
AccB1I GGYRCC 1 cut(s) 717
AccB7I CCANNNNNTGG 1 cut(s) 794
AccI GTMKAC 3 cut(s) 652, 1246, 2406
AccII CGCG 2 cut(s) 409, 2870
AciI CCGC 3 cut(s) 449, 1589, 2870
AclWI GGATC 3 cut(s) 1351, 1474, 2870
AcoI YGGCCR 3 cut(s) 811, 2984, 3084
AcsI RAATTY 4 cut(s) 304, 2114, 2160, 2915
AcuI CTGAAG 3 cut(s) 1887, 2355, 2870
AcyI GRCGYC 1 cut(s) 718
AfaI GTAC 8 cut(s) 1148, 1314, 1363, 1378, 1520, 1593, 1722, 2675
AfiI CCNNNNNNNGG 7 cut(s) 222, 458, 697, 794, 1399, 1489, 2612
AhdI GACNNNNNGTC 1 cut(s) 667
AhlI ACTAGT 1 cut(s) 1763
AjiI CACGTC 1 cut(s) 942
AjnI CCWGG 1 cut(s) 2074
AjuI GAANNNNNNNTTGG 4 cut(s) 173, 205, 732, 764
AleI CACNNNNGTG 1 cut(s) 2768
Alw21I GWGCWC 3 cut(s) 318, 1763, 2560
Alw26I GTCTC 3 cut(s) 241, 602, 1328
Alw44I GTGCAC 1 cut(s) 1759
AlwI GGATC 3 cut(s) 1351, 1474, 2870
AlwNI CAGNNNCTG 1 cut(s) 1211
AoxI GGCC 5 cut(s) 811, 1523, 2072, 2984, 3084
ApaLI GTGCAC 1 cut(s) 1759
ApeKI GCWGC 8 cut(s) 524, 1205, 1208, 1736, 1817, 1824, 2456, 2480
ApoI RAATTY 4 cut(s) 304, 2114, 2160, 2915
AseI ATTAAT 1 cut(s) 252
Asp700I GAANNNNTTC 3 cut(s) 305, 887, 2825
AspLEI GCGC 4 cut(s) 409, 411, 529, 720
AspS9I GGNCC 2 cut(s) 241, 1099
AsuC2I CCSGG 1 cut(s) 1959
AsuHPI GGTGA 9 cut(s) 398, 764, 980, 1414, 1702, 2011, 2261, 2434, 2884
AsuNHI GCTAGC 1 cut(s) 1820
AvaII GGWCC 2 cut(s) 241, 1099
BaeGI GKGCMC 2 cut(s) 25, 1763
BaeI ACNNNNGTAYC 2 cut(s) 1583, 1616
BalI TGGCCA 1 cut(s) 2986
BanI GGYRCC 1 cut(s) 717
BanII GRGCYC 2 cut(s) 318, 2560
BbsI GAAGAC 3 cut(s) 405, 2172, 2818
Bbv12I GWGCWC 3 cut(s) 318, 1763, 2560
BbvI GCAGC 8 cut(s) 511, 1195, 1217, 1748, 1829, 1836, 2443, 2492
BccI CCATC 7 cut(s) 131, 788, 1288, 1904, 2164, 2246, 2890
BceAI ACGGC 1 cut(s) 826
BcgI CGANNNNNNTGC 4 cut(s) 580, 614, 1825, 1859
BciT130I CCWGG 1 cut(s) 2076
BciVI GTATCC 1 cut(s) 3020
BclI TGATCA 3 cut(s) 2349, 2466, 2538
BcnI CCSGG 1 cut(s) 1959
BcoDI GTCTC 3 cut(s) 241, 602, 1328
BcuI ACTAGT 1 cut(s) 1763
BfaI CTAG 9 cut(s) 135, 806, 1527, 1751, 1764, 1821, 2175, 2810, 2999
BfmI CTRYAG 2 cut(s) 640, 2379
BfoI RGCGCY 1 cut(s) 721
BfuAI ACCTGC 1 cut(s) 2483
BfuI GTATCC 1 cut(s) 3020
BglII AGATCT 1 cut(s) 1548
BisI GCNGC 8 cut(s) 525, 1206, 1209, 1737, 1818, 1825, 2457, 2481
BlsI GCNGC 8 cut(s) 526, 1207, 1210, 1738, 1819, 1826, 2458, 2482
Bme1390I CCNGG 2 cut(s) 1959, 2076
Bme18I GGWCC 2 cut(s) 241, 1099
BmeRI GACNNNNNGTC 1 cut(s) 667
BmgBI CACGTC 1 cut(s) 942
BmgT120I GGNCC 2 cut(s) 241, 1099
BmiI GGNNCC 4 cut(s) 243, 430, 719, 2654
BmrFI CCNGG 2 cut(s) 1959, 2076
BmrI ACTGGG 2 cut(s) 973, 1122
BmsI GCATC 6 cut(s) 355, 356, 382, 555, 1823, 2254
BmtI GCTAGC 1 cut(s) 1824
BmuI ACTGGG 2 cut(s) 973, 1122
BoxI GACNNNNGTC 1 cut(s) 1950
BpiI GAAGAC 3 cut(s) 405, 2172, 2818
BplI GAGNNNNNCTC 4 cut(s) 129, 161, 221, 253
BpmI CTGGAG 1 cut(s) 1803
BpuEI CTTGAG 2 cut(s) 2649, 2894
BpuMI CCSGG 1 cut(s) 1959
BsaHI GRCGYC 1 cut(s) 718
BsaI GGTCTC 1 cut(s) 1328
BsaJI CCNNGG 4 cut(s) 672, 1338, 2301, 2328
BsaXI ACNNNNNCTCC 2 cut(s) 1674, 1704
Bsc4I CCNNNNNNNGG 7 cut(s) 222, 458, 697, 794, 1399, 1489, 2612
Bse118I RCCGGY 2 cut(s) 2018, 2269
Bse1I ACTGG 8 cut(s) 233, 968, 999, 1117, 1513, 1730, 2609, 3087
Bse3DI GCAATG 5 cut(s) 52, 402, 1314, 1761, 2216
BseBI CCWGG 1 cut(s) 2076
BseDI CCNNGG 4 cut(s) 672, 1338, 2301, 2328
BseGI GGATG 5 cut(s) 524, 957, 1132, 2362, 2427
BseLI CCNNNNNNNGG 7 cut(s) 222, 458, 697, 794, 1399, 1489, 2612
BseMI GCAATG 5 cut(s) 52, 402, 1314, 1761, 2216
BseMII CTCAG 6 cut(s) 276, 870, 1566, 1843, 2083, 2352
BseNI ACTGG 8 cut(s) 233, 968, 999, 1117, 1513, 1730, 2609, 3087
BsePI GCGCGC 1 cut(s) 407
BseSI GKGCMC 2 cut(s) 25, 1763
BseXI GCAGC 8 cut(s) 511, 1195, 1217, 1748, 1829, 1836, 2443, 2492
BseYI CCCAGC 1 cut(s) 244
Bsh1236I CGCG 2 cut(s) 409, 2870
Bsh1285I CGRYCG 1 cut(s) 928
BshFI GGCC 5 cut(s) 813, 1525, 2074, 2986, 3086
BshNI GGYRCC 1 cut(s) 717
BsiEI CGRYCG 1 cut(s) 928
BsiHKAI GWGCWC 3 cut(s) 318, 1763, 2560
BsiSI CCGG 4 cut(s) 1959, 2019, 2270, 3087
BslFI GGGAC 5 cut(s) 227, 916, 1941, 2486, 2958
BslI CCNNNNNNNGG 7 cut(s) 222, 458, 697, 794, 1399, 1489, 2612
BsmAI GTCTC 3 cut(s) 241, 602, 1328
BsmFI GGGAC 5 cut(s) 227, 916, 1941, 2486, 2958
BsmI GAATGC 4 cut(s) 106, 1638, 1841, 1988
BsnI GGCC 5 cut(s) 813, 1525, 2074, 2986, 3086
Bso31I GGTCTC 1 cut(s) 1328
Bsp1286I GDGCHC 4 cut(s) 25, 318, 1763, 2560
Bsp1407I TGTACA 2 cut(s) 1518, 1720
Bsp19I CCATGG 2 cut(s) 1338, 2301
BspACI CCGC 3 cut(s) 449, 1589, 2870
BspANI GGCC 5 cut(s) 813, 1525, 2074, 2986, 3086
BspCNI CTCAG 6 cut(s) 277, 871, 1565, 1842, 2082, 2351
BspFNI CGCG 2 cut(s) 409, 2870
BspLI GGNNCC 4 cut(s) 243, 430, 719, 2654
BspMI ACCTGC 1 cut(s) 2483
BspOI GCTAGC 1 cut(s) 1824
BspPI GGATC 3 cut(s) 1351, 1474, 2870
BspQI GCTCTTC 1 cut(s) 1863
BspT107I GGYRCC 1 cut(s) 717
BspTNI GGTCTC 1 cut(s) 1328
BsrDI GCAATG 5 cut(s) 52, 402, 1314, 1761, 2216
BsrFI RCCGGY 2 cut(s) 2018, 2269
BsrGI TGTACA 2 cut(s) 1518, 1720
BsrI ACTGG 8 cut(s) 233, 968, 999, 1117, 1513, 1730, 2609, 3087
BssAI RCCGGY 2 cut(s) 2018, 2269
BssECI CCNNGG 4 cut(s) 672, 1338, 2301, 2328
BssHII GCGCGC 1 cut(s) 407
BssNI GRCGYC 1 cut(s) 718
BssT1I CCWWGG 4 cut(s) 672, 1338, 2301, 2328
Bst2UI CCWGG 1 cut(s) 2076
Bst4CI ACNGT 6 cut(s) 572, 584, 926, 2383, 2446, 2686
Bst6I CTCTTC 4 cut(s) 171, 1280, 1688, 1863
BstACI GRCGYC 1 cut(s) 718
BstAUI TGTACA 2 cut(s) 1518, 1720
BstC8I GCNNGC 4 cut(s) 409, 932, 1020, 1822
BstDEI CTNAG 7 cut(s) 285, 879, 1407, 1552, 1829, 2069, 2338
BstDSI CCRYGG 2 cut(s) 1338, 2301
BstF5I GGATG 5 cut(s) 524, 957, 1132, 2362, 2427
BstFNI CGCG 2 cut(s) 409, 2870
BstH2I RGCGCY 1 cut(s) 721
BstHHI GCGC 4 cut(s) 409, 411, 529, 720
BstMAI GTCTC 3 cut(s) 241, 602, 1328
BstMCI CGRYCG 1 cut(s) 928
BstMWI GCNNNNNNNGC 5 cut(s) 322, 987, 1833, 2375, 2489
BstNI CCWGG 1 cut(s) 2076
BstNSI RCATGY 2 cut(s) 934, 2089
BstPAI GACNNNNGTC 1 cut(s) 1950
BstSCI CCNGG 2 cut(s) 1957, 2074
BstSFI CTRYAG 2 cut(s) 640, 2379
BstSLI GKGCMC 2 cut(s) 25, 1763
BstUI CGCG 2 cut(s) 409, 2870
BstV1I GCAGC 8 cut(s) 511, 1195, 1217, 1748, 1829, 1836, 2443, 2492
BstV2I GAAGAC 3 cut(s) 405, 2172, 2818
BstX2I RGATCY 2 cut(s) 1343, 1548
BstXI CCANNNNNNTGG 1 cut(s) 2994
BstYI RGATCY 2 cut(s) 1343, 1548
BsuI GTATCC 1 cut(s) 3020
BsuRI GGCC 5 cut(s) 813, 1525, 2074, 2986, 3086
BtgI CCRYGG 2 cut(s) 1338, 2301
BtgZI GCGATG 1 cut(s) 2851
BtrI CACGTC 1 cut(s) 942
BtsCI GGATG 5 cut(s) 524, 957, 1132, 2362, 2427
BtsI GCAGTG 3 cut(s) 2034, 2103, 2247
BveI ACCTGC 1 cut(s) 2483
Cac8I GCNNGC 4 cut(s) 409, 932, 1020, 1822
CaiI CAGNNNCTG 1 cut(s) 1211
CfoI GCGC 4 cut(s) 409, 411, 529, 720
Cfr10I RCCGGY 2 cut(s) 2018, 2269
Cfr13I GGNCC 2 cut(s) 241, 1099
Csp6I GTAC 8 cut(s) 1147, 1313, 1362, 1377, 1519, 1592, 1721, 2674
CspCI CAANNNNNGTGG 4 cut(s) 1206, 1241, 2507, 2542
CviQI GTAC 8 cut(s) 1147, 1313, 1362, 1377, 1519, 1592, 1721, 2674
DdeI CTNAG 7 cut(s) 285, 879, 1407, 1552, 1829, 2069, 2338
DinI GGCGCC 1 cut(s) 719
DriI GACNNNNNGTC 1 cut(s) 667
EaeI YGGCCR 3 cut(s) 811, 2984, 3084
Eam1104I CTCTTC 4 cut(s) 171, 1280, 1688, 1863
Eam1105I GACNNNNNGTC 1 cut(s) 667
EarI CTCTTC 4 cut(s) 171, 1280, 1688, 1863
Ecl136II GAGCTC 2 cut(s) 316, 2558
Eco130I CCWWGG 4 cut(s) 672, 1338, 2301, 2328
Eco147I AGGCCT 2 cut(s) 1525, 2074
Eco24I GRGCYC 2 cut(s) 318, 2560
Eco31I GGTCTC 1 cut(s) 1328
Eco47I GGWCC 2 cut(s) 241, 1099
Eco53kI GAGCTC 2 cut(s) 316, 2558
Eco57I CTGAAG 3 cut(s) 1887, 2355, 2870
EcoICRI GAGCTC 2 cut(s) 316, 2558
EcoRII CCWGG 1 cut(s) 2074
EcoT14I CCWWGG 4 cut(s) 672, 1338, 2301, 2328
EcoT22I ATGCAT 1 cut(s) 1838
EcoT38I GRGCYC 2 cut(s) 318, 2560
EgeI GGCGCC 1 cut(s) 719
EheI GGCGCC 1 cut(s) 719
ErhI CCWWGG 4 cut(s) 672, 1338, 2301, 2328
FalI AAGNNNNNCTT 6 cut(s) 302, 334, 2073, 2105, 2810, 2842
FaqI GGGAC 5 cut(s) 227, 916, 1941, 2486, 2958
FbaI TGATCA 3 cut(s) 2349, 2466, 2538
FblI GTMKAC 3 cut(s) 652, 1246, 2406
Fnu4HI GCNGC 8 cut(s) 525, 1206, 1209, 1737, 1818, 1825, 2457, 2481
FokI GGATG 5 cut(s) 531, 964, 1139, 2369, 2414
FriOI GRGCYC 2 cut(s) 318, 2560
Fsp4HI GCNGC 8 cut(s) 525, 1206, 1209, 1737, 1818, 1825, 2457, 2481
FspBI CTAG 9 cut(s) 135, 806, 1527, 1751, 1764, 1821, 2175, 2810, 2999
GlaI GCGC 4 cut(s) 408, 410, 528, 719
GluI GCNGC 8 cut(s) 525, 1206, 1209, 1737, 1818, 1825, 2457, 2481
GsaI CCCAGC 1 cut(s) 248
GsuI CTGGAG 1 cut(s) 1803
HaeII RGCGCY 1 cut(s) 721
HaeIII GGCC 5 cut(s) 813, 1525, 2074, 2986, 3086
HapII CCGG 4 cut(s) 1959, 2019, 2270, 3087
HhaI GCGC 4 cut(s) 409, 411, 529, 720
Hin1I GRCGYC 1 cut(s) 718
Hin6I GCGC 4 cut(s) 407, 409, 527, 718
HinP1I GCGC 4 cut(s) 407, 409, 527, 718
HincII GTYRAC 3 cut(s) 12, 653, 1789
HindII GTYRAC 3 cut(s) 12, 653, 1789
HindIII AAGCTT 2 cut(s) 1443, 2195
HpaI GTTAAC 1 cut(s) 1789
HpaII CCGG 4 cut(s) 1959, 2019, 2270, 3087
HphI GGTGA 9 cut(s) 398, 764, 980, 1414, 1702, 2011, 2261, 2434, 2884
Hpy188I TCNGA 8 cut(s) 72, 1103, 1171, 1383, 1540, 1832, 2341, 3045
HpyCH4III ACNGT 6 cut(s) 572, 584, 926, 2383, 2446, 2686
HpyCH4IV ACGT 4 cut(s) 941, 1024, 1647, 2004
HpyF10VI GCNNNNNNNGC 5 cut(s) 322, 987, 1833, 2375, 2489
HpyF3I CTNAG 7 cut(s) 285, 879, 1407, 1552, 1829, 2069, 2338
HpySE526I ACGT 4 cut(s) 941, 1024, 1647, 2004
Hsp92I GRCGYC 1 cut(s) 718
HspAI GCGC 4 cut(s) 407, 409, 527, 718
KasI GGCGCC 1 cut(s) 717
Ksp22I TGATCA 3 cut(s) 2349, 2466, 2538
KspAI GTTAAC 1 cut(s) 1789
LguI GCTCTTC 1 cut(s) 1863
LmnI GCTCC 4 cut(s) 313, 322, 2093, 2555
Lsp1109I GCAGC 8 cut(s) 511, 1195, 1217, 1748, 1829, 1836, 2443, 2492
LweI GCATC 6 cut(s) 355, 356, 382, 555, 1823, 2254
MaeI CTAG 9 cut(s) 135, 806, 1527, 1751, 1764, 1821, 2175, 2810, 2999
MaeII ACGT 4 cut(s) 941, 1024, 1647, 2004
MfeI CAATTG 3 cut(s) 1218, 2877, 2988
MflI RGATCY 2 cut(s) 1343, 1548
MhlI GDGCHC 4 cut(s) 25, 318, 1763, 2560
MlsI TGGCCA 1 cut(s) 2986
MluNI TGGCCA 1 cut(s) 2986
Mly113I GGCGCC 1 cut(s) 718
MlyI GAGTC 2 cut(s) 658, 1255
MmeI TCCRAC 4 cut(s) 456, 554, 1586, 2461
Mox20I TGGCCA 1 cut(s) 2986
Mph1103I ATGCAT 1 cut(s) 1838
MroXI GAANNNNTTC 3 cut(s) 305, 887, 2825
MscI TGGCCA 1 cut(s) 2986
MseI TTAA 7 cut(s) 252, 1500, 1659, 1788, 1941, 2507, 2787
MslI CAYNNNNRTG 3 cut(s) 1610, 2768, 2870
Msp20I TGGCCA 1 cut(s) 2986
MspA1I CMGCKG 1 cut(s) 1208
MspI CCGG 4 cut(s) 1959, 2019, 2270, 3087
MspR9I CCNGG 2 cut(s) 1959, 2076
MunI CAATTG 3 cut(s) 1218, 2877, 2988
Mva1269I GAATGC 4 cut(s) 106, 1638, 1841, 1988
MvaI CCWGG 1 cut(s) 2076
MvnI CGCG 2 cut(s) 409, 2870
MwoI GCNNNNNNNGC 5 cut(s) 322, 987, 1833, 2375, 2489
NarI GGCGCC 1 cut(s) 718
NciI CCSGG 1 cut(s) 1959
NcoI CCATGG 2 cut(s) 1338, 2301
NheI GCTAGC 1 cut(s) 1820
NlaIV GGNNCC 4 cut(s) 243, 430, 719, 2654
NmuCI GTSAC 6 cut(s) 874, 937, 1258, 1402, 2242, 2872
NsiI ATGCAT 1 cut(s) 1838
NspI RCATGY 2 cut(s) 934, 2089
OliI CACNNNNGTG 1 cut(s) 2768
PaeI GCATGC 1 cut(s) 934
PauI GCGCGC 1 cut(s) 407
PceI AGGCCT 2 cut(s) 1525, 2074
PciSI GCTCTTC 1 cut(s) 1863
PctI GAATGC 4 cut(s) 106, 1638, 1841, 1988
PdmI GAANNNNTTC 3 cut(s) 305, 887, 2825
PfeI GAWTC 8 cut(s) 58, 258, 378, 462, 833, 883, 1535, 2308
PflFI GACNNNGTC 1 cut(s) 648
PflMI CCANNNNNTGG 1 cut(s) 794
PkrI GCNGC 8 cut(s) 526, 1207, 1210, 1738, 1819, 1826, 2458, 2482
PleI GAGTC 2 cut(s) 657, 1255
PluTI GGCGCC 1 cut(s) 721
PpsI GAGTC 2 cut(s) 657, 1255
PshAI GACNNNNGTC 1 cut(s) 1950
PshBI ATTAAT 1 cut(s) 252
Psp124BI GAGCTC 2 cut(s) 318, 2560
Psp6I CCWGG 1 cut(s) 2074
PspFI CCCAGC 1 cut(s) 244
PspGI CCWGG 1 cut(s) 2074
PspN4I GGNNCC 4 cut(s) 243, 430, 719, 2654
PspPI GGNCC 2 cut(s) 241, 1099
PstNI CAGNNNCTG 1 cut(s) 1211
PsuI RGATCY 2 cut(s) 1343, 1548
PsyI GACNNNGTC 1 cut(s) 648
PteI GCGCGC 1 cut(s) 407
PvuII CAGCTG 1 cut(s) 1208
RsaI GTAC 8 cut(s) 1148, 1314, 1363, 1378, 1520, 1593, 1722, 2675
RsaNI GTAC 8 cut(s) 1147, 1313, 1362, 1377, 1519, 1592, 1721, 2674
RseI CAYNNNNRTG 3 cut(s) 1610, 2768, 2870
SacI GAGCTC 2 cut(s) 318, 2560
SalI GTCGAC 1 cut(s) 651
SapI GCTCTTC 1 cut(s) 1863
SaqAI TTAA 7 cut(s) 252, 1500, 1659, 1788, 1941, 2507, 2787
SatI GCNGC 8 cut(s) 525, 1206, 1209, 1737, 1818, 1825, 2457, 2481
Sau96I GGNCC 2 cut(s) 241, 1099
SchI GAGTC 2 cut(s) 658, 1255
ScrFI CCNGG 2 cut(s) 1959, 2076
SduI GDGCHC 4 cut(s) 25, 318, 1763, 2560
SfaNI GCATC 6 cut(s) 355, 356, 382, 555, 1823, 2254
SfcI CTRYAG 2 cut(s) 640, 2379
SfoI GGCGCC 1 cut(s) 719
SinI GGWCC 2 cut(s) 241, 1099
SmiMI CAYNNNNRTG 3 cut(s) 1610, 2768, 2870
SmlI CTYRAG 2 cut(s) 2664, 2909
SmoI CTYRAG 2 cut(s) 2664, 2909
SpeI ACTAGT 1 cut(s) 1763
SphI GCATGC 1 cut(s) 934
SseBI AGGCCT 2 cut(s) 1525, 2074
SsiI CCGC 3 cut(s) 449, 1589, 2870
SspDI GGCGCC 1 cut(s) 717
SspI AATATT 1 cut(s) 735
SspMI CTAG 9 cut(s) 135, 806, 1527, 1751, 1764, 1821, 2175, 2810, 2999
SstI GAGCTC 2 cut(s) 318, 2560
StuI AGGCCT 2 cut(s) 1525, 2074
StyD4I CCNGG 2 cut(s) 1957, 2074
StyI CCWWGG 4 cut(s) 672, 1338, 2301, 2328
TaaI ACNGT 6 cut(s) 572, 584, 926, 2383, 2446, 2686
TaiI ACGT 4 cut(s) 944, 1027, 1650, 2007
TaqI TCGA 6 cut(s) 228, 652, 1046, 1299, 1473, 1601
TaqII GACCGA 2 cut(s) 229, 1925
TatI WGTACW 4 cut(s) 1146, 1361, 1518, 1720
TfiI GAWTC 8 cut(s) 58, 258, 378, 462, 833, 883, 1535, 2308
Tru1I TTAA 7 cut(s) 252, 1500, 1659, 1788, 1941, 2507, 2787
Tru9I TTAA 7 cut(s) 252, 1500, 1659, 1788, 1941, 2507, 2787
TseFI GTSAC 6 cut(s) 874, 937, 1258, 1402, 2242, 2872
TseI GCWGC 8 cut(s) 524, 1205, 1208, 1736, 1817, 1824, 2456, 2480
Tsp45I GTSAC 6 cut(s) 874, 937, 1258, 1402, 2242, 2872
TspGWI ACGGA 1 cut(s) 1330
Tth111I GACNNNGTC 1 cut(s) 648
Van91I CCANNNNNTGG 1 cut(s) 794
VneI GTGCAC 1 cut(s) 1759
VpaK11BI GGWCC 2 cut(s) 241, 1099
VspI ATTAAT 1 cut(s) 252
XapI RAATTY 4 cut(s) 304, 2114, 2160, 2915
XbaI TCTAGA 2 cut(s) 134, 805
XceI RCATGY 2 cut(s) 934, 2089
XmiI GTMKAC 3 cut(s) 652, 1246, 2406
XmnI GAANNNNTTC 3 cut(s) 305, 887, 2825
XspI CTAG 9 cut(s) 135, 806, 1527, 1751, 1764, 1821, 2175, 2810, 2999
Zsp2I ATGCAT 1 cut(s) 1838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.