Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000174

Physical Location & Seq

Genomic Coordinates Reverse (-)

1506585 .. 1519323

Gene Structure 12739 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g01690.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2709 bp

ATGTCTAAAGCTACCACCCTGCATGCAAAATTTGGGAGCATTGAGTTGCTGCTTGATGTTCCCAGCACTAGTCTTGGCATAAGCAAAAGAAAATGGCATTCTGCTTTCCTCACCATATACTGCTCTAGAGCCTTCCTCTCTTTACGACCTTCTTCTCAACCCAAAGCCACCAAAGCCACATTCATATCACGCACGGTTCCATACTACATTGTTAGCATTGGTTCAGTTTCATCACCAGCCATTCATGGCTTCAAAGCTGATCAAAAAAGCCTCACTGATCTTGTGAAGGAGAAAAATCTCAACCACCTCCTGGAGCTTGGAGGGGTTGAAGAACTGGCATCAGCACTCAAAACCGATGCACAACATGGAATCAATGGTGATGATGCTGAAGGCATTGCGCGTAGACACGAGGCTTTTGGTTCCAACACATACAAGAAACCACCAACACAAGGGTTCCTCCATTTTGTGTGGGAAGCCTTCAAAGACCTCACAATTCTTATTCTTTTAGGCTGTGCAGCACTCTCTCTTGGTTTCGGCATCAAAGAGCATGGATTGAAAGAGGGTTGGATTGACGGTGGAAGCATTTGTCTCGCGGTCATTCTGGTTATTTCTGTTTCAGCCATAAGCAACTACAGACAGAGCAGACAGTTTGACAAGTTGTCGAAAGTCAGTAACAATCTCCAAATTGAAGCCGTGAGAAATGGAAGGCGCCAACTGATTTCAATATTTGAAATCGTGGTGGGTGATATCATCTGCTTGAAAATTGGTGATCAAGTTCCAGCTGATGGTTTACTTCTAGAAGGCCACTCTTTATCAGTAGACGAATCAAGCATGACAGGGGAGAGTGACCATGTTGAGGTTAGTGTCCATGAGAATCCTTTCTTGTTCTCTGGGACTAAAATTGCTGACGGTTATGGCCGGATGCTAGTCACATCAGTCGGCATGAACACGAATTGGGGTGCAATGATGAGCCAAATCAGCCAAGACACGAGTGAAAAGACACCTCTGCAAGCACGTCTAGACAAGCTAACTTCATCAATAGGTAAAGTTGGCTTGGCAGTTGCTTTCTTTGTTCTTGTAGTCATGTTGGTCCGATACTTCACAGGGAATACCGAGGATGAGAATGGAAACAAAGAGTACAATGGCAGCAAGACAAAATCTGATGACATAATAAACGCTGTCATAGGGATTGTAGCAGCTGCCGTTACAATTGTTGTGGTGGCAATTCCGGAAGGTCTACCCTTAGCTGTGACTCTCACTCTTGCTTATTCCATGAAGAGAATGATGGTAGATAACGCAATGGTCCGGAAGCTCTCAGCTTGTGAGACCATGGGATCTGCAACAACAATCTGTACTGACAAAACAGGTACTCTGACCATGAACCAGATGAAGGTTACTAAGTTTTGGTTGGGGAAAGAATCTATGGAAGAAGGAGCTTATACATCTATTTCTCCTGATGTCGTCGACTTGATCCAAGAAGCGGTTGCTCTCAACACAACTGGTAGTGTGTACAGGCCTAGCTTGGAATCCGAAGTGGAGATCTCTGGCAGTCCAACTGAAAAGGCTATTCTTTCATGGGCAGTACATGAGTCGAAGATGGATATGGAGAAAGTGGTGAAGAGTTGTAGCATTCTTCACGTAGAAGCCTTTAATTCGAAGAAGAAACAAAGTGGAGTTCTAGTGGAAAGAAACACAGATAGCTCAATCCATGTACACTGGAAAGGAGCAGCAGAGATGATACTAGCCATGTGCAAAAGTTACTACACTGCCTCTGGAATTGTTAAGAATATGGATGAAAATGAAAAGAGGAAGTTTGAGCAGATTATTCAAGGTATGGCAGCTAGCAGCCTCAGATGCATAGCGTTTGCTCATAAAAAAGTTCCTGCAGAAGAGCATCTAAATAAAGACCAGAAATTTGTGCTTATGGAAGATGGACTGACCCTATTAGGAGTTGTTGGTCTTAAGGATCCATGTCGGCCAGGTGTAAAGAAAGCAGTTGAAGAATGTCAATATGCAGGGGTTAATGTCAAAATGATTACCGGCGACAATGTTTTCACCGCAAAAGCGATAGCCACTGAATGTGGGATACTCAGGACTGGTCAGGACATGTTCGGAGCAGTGATTGAAGGTGTGGAATTCCGCAACTACACGCCAGAAGAGAGACTGGAGAAAGTTGACAAAATTTGTGTGATGGCAAGGTCTTCCCCTTTTGATAAGCTTCTAATGGTGCAATGCTTGAAACAGAAAGGTCATGTTGTTGCAGTGACCGGTGATGGTACCAATGATGCACCAGCATTAAAAGAAGCTGATATAGGACTTTCTATGGGGATTCAAGGAACAGAAGTTGCTAAAGAGAGCTCAGATATTGTGATCATGGATGATAACTTTGCTTCAGTGGCTACAGTTTTGATGTGGGGGAGATGTGTGTACAATAATATCCAGAAGTTCATTCAATTCCAGCTCACCGTCAATGTTGCAGCTCTTGTGATCAACTTTGTAGCAGCAGTTTCCGCAGGTCAAGTCCCACTAACAGCAGTTCAGTTATTGTGGGTAAACTTGATAATGGACACACTTGGAGCTCTTGCTCTTGCCACAGAAAAACCCACAAAAGAACTTATGGAGAAGCCACCAGTGGGAAGGACAGCGCCTCTCATCACAAACATCATGTGGAGGAACCTCTTGCCTCAAAAAAACCCACAAAAGAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

903

Amino Acids

98.15

Weight (kDa)

6.68

Isoelectric Point (pI)

31.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	106 - 175	3.2e-14	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	231 - 326	4.5e-21	P-type ATPase actuator domain
Hydrolase	PF00702	449 - 795	2.3e-12	haloacid dehalogenase-like hydrolase
Cation_ATPase	PF13246	487 - 660	1.2e-29	P-type ATPase, cytoplasmic domain N
Cation_ATPase_C	PF00689	866 - 1034	2.8e-48	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22910
fragaria_vesca	FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica	MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica	Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis	pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis	RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata	RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora	Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa	Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha	Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana	Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2504
Acc65I	GGTACC	1 cut(s)	2276
AccB1I	GGYRCC	2 cut(s)	708, 2276
AccB7I	CCANNNNNTGG	2 cut(s)	310, 785
AccI	GTMKAC	4 cut(s)	403, 819, 1237, 1464
AccII	CGCG	2 cut(s)	400, 593
AccIII	TCCGGA	2 cut(s)	1228, 1305
AciI	CCGC	5 cut(s)	593, 1481, 2058, 2140, 2511
AclWI	GGATC	4 cut(s)	1342, 1465, 1961, 1974
AcoI	YGGCCR	2 cut(s)	916, 1976
AcsI	RAATTY	4 cut(s)	29, 1913, 2135, 2181
AcuI	CTGAAG	2 cut(s)	408, 2376
AcyI	GRCGYC	1 cut(s)	709
AfaI	GTAC	8 cut(s)	1139, 1354, 1369, 1511, 1584, 1713, 2278, 2429
AfiI	CCNNNNNNNGG	7 cut(s)	310, 449, 785, 856, 1390, 1480, 2633
AflII	CTTAAG	1 cut(s)	1961
AflIII	ACRYGT	1 cut(s)	2106
AgeI	ACCGGT	1 cut(s)	2267
AhdI	GACNNNNNGTC	1 cut(s)	658
AhlI	ACTAGT	1 cut(s)	68
AjiI	CACGTC	1 cut(s)	1016
AjnI	CCWGG	2 cut(s)	309, 1978
AjuI	GAANNNNNNNTTGG	2 cut(s)	164, 196
Alw21I	GWGCWC	2 cut(s)	2360, 2581
Alw26I	GTCTC	3 cut(s)	593, 1319, 2155
AlwI	GGATC	4 cut(s)	1342, 1465, 1961, 1974
Aor13HI	TCCGGA	2 cut(s)	1228, 1305
AoxI	GGCC	4 cut(s)	802, 916, 1514, 1976
ApoI	RAATTY	4 cut(s)	29, 1913, 2135, 2181
ArsI	GACNNNNNNTTYG	2 cut(s)	1898, 1930
AsiGI	ACCGGT	1 cut(s)	2267
Asp700I	GAANNNNTTC	1 cut(s)	878
Asp718I	GGTACC	1 cut(s)	2276
AspLEI	GCGC	3 cut(s)	400, 711, 2647
AspS9I	GGNCC	2 cut(s)	1090, 1303
AsuHPI	GGTGA	9 cut(s)	103, 225, 389, 755, 779, 1627, 2047, 2282, 2455
AsuII	TTCGAA	1 cut(s)	1655
AsuNHI	GCTAGC	1 cut(s)	1841
AvaII	GGWCC	2 cut(s)	1090, 1303
BamHI	GGATCC	1 cut(s)	1966
BanI	GGYRCC	2 cut(s)	708, 2276
BanII	GRGCYC	2 cut(s)	2360, 2581
BauI	CACGAG	2 cut(s)	407, 988
BbsI	GAAGAC	1 cut(s)	2193
Bbv12I	GWGCWC	2 cut(s)	2360, 2581
BccI	CCATC	6 cut(s)	779, 1279, 1591, 1925, 2185, 2267
BceAI	ACGGC	2 cut(s)	677, 1187
BcgI	CGANNNNNNTGC	2 cut(s)	571, 605
BciT130I	CCWGG	2 cut(s)	311, 1980
BciVI	GTATCC	1 cut(s)	2079
BclI	TGATCA	4 cut(s)	259, 769, 2370, 2487
BcoDI	GTCTC	3 cut(s)	593, 1319, 2155
BcuI	ACTAGT	1 cut(s)	68
BfaI	CTAG	9 cut(s)	69, 126, 797, 926, 1019, 1518, 1679, 1742, 1842
BfmI	CTRYAG	3 cut(s)	631, 1884, 2400
BfoI	RGCGCY	2 cut(s)	712, 2648
BfrI	CTTAAG	1 cut(s)	1961
BfuAI	ACCTGC	1 cut(s)	2504
BfuI	GTATCC	1 cut(s)	2079
BglII	AGATCT	1 cut(s)	1539
Bme1390I	CCNGG	2 cut(s)	311, 1980
Bme18I	GGWCC	2 cut(s)	1090, 1303
BmeRI	GACNNNNNGTC	1 cut(s)	658
BmgBI	CACGTC	1 cut(s)	1016
BmgT120I	GGNCC	2 cut(s)	1090, 1303
BmiI	GGNNCC	7 cut(s)	198, 421, 455, 710, 1968, 2278, 2675
BmrFI	CCNGG	2 cut(s)	311, 1980
BmsI	GCATC	8 cut(s)	346, 347, 373, 546, 912, 1844, 1903, 2275
BmtI	GCTAGC	1 cut(s)	1845
BpiI	GAAGAC	1 cut(s)	2193
BplI	GAGNNNNNCTC	2 cut(s)	120, 152
BpmI	CTGGAG	2 cut(s)	332, 2186
Bpu10I	CCTNAGC	1 cut(s)	1243
Bpu14I	TTCGAA	1 cut(s)	1655
BsaAI	YACGTR	1 cut(s)	1639
BsaHI	GRCGYC	1 cut(s)	709
BsaI	GGTCTC	1 cut(s)	1319
BsaJI	CCNNGG	2 cut(s)	1113, 1329
BsaWI	WCCGGW	3 cut(s)	1228, 1305, 2267
BsaXI	ACNNNNNCTCC	2 cut(s)	1665, 1695
Bsc4I	CCNNNNNNNGG	7 cut(s)	310, 449, 785, 856, 1390, 1480, 2633
Bse118I	RCCGGY	2 cut(s)	2039, 2267
Bse1I	ACTGG	6 cut(s)	339, 1504, 1721, 2101, 2169, 2630
Bse3DI	GCAATG	4 cut(s)	393, 969, 1305, 2237
BseAI	TCCGGA	2 cut(s)	1228, 1305
BseBI	CCWGG	2 cut(s)	311, 1980
BseDI	CCNNGG	2 cut(s)	1113, 1329
BseGI	GGATG	4 cut(s)	927, 1123, 1798, 2383
BseLI	CCNNNNNNNGG	7 cut(s)	310, 449, 785, 856, 1390, 1480, 2633
BseMI	GCAATG	4 cut(s)	393, 969, 1305, 2237
BseMII	CTCAG	4 cut(s)	1329, 1864, 2104, 2373
BseNI	ACTGG	6 cut(s)	339, 1504, 1721, 2101, 2169, 2630
BseYI	CCCAGC	1 cut(s)	62
BsgI	GTGCAG	1 cut(s)	534
Bsh1236I	CGCG	2 cut(s)	400, 593
BshFI	GGCC	4 cut(s)	804, 918, 1516, 1978
BshNI	GGYRCC	2 cut(s)	708, 2276
BshTI	ACCGGT	1 cut(s)	2267
BsiHKAI	GWGCWC	2 cut(s)	2360, 2581
BsiSI	CCGG	5 cut(s)	919, 1229, 1306, 2040, 2268
BslFI	GGGAC	2 cut(s)	907, 2507
BslI	CCNNNNNNNGG	7 cut(s)	310, 449, 785, 856, 1390, 1480, 2633
BsmAI	GTCTC	3 cut(s)	593, 1319, 2155
BsmFI	GGGAC	2 cut(s)	907, 2507
BsmI	GAATGC	2 cut(s)	97, 1629
BsnI	GGCC	4 cut(s)	804, 918, 1516, 1978
Bso31I	GGTCTC	1 cut(s)	1319
Bsp119I	TTCGAA	1 cut(s)	1655
Bsp1286I	GDGCHC	2 cut(s)	2360, 2581
Bsp13I	TCCGGA	2 cut(s)	1228, 1305
Bsp1407I	TGTACA	3 cut(s)	1509, 1711, 2427
Bsp143I	GATC	9 cut(s)	259, 277, 769, 1334, 1470, 1539, 1966, 2370, 2487
Bsp19I	CCATGG	1 cut(s)	1329
BspACI	CCGC	5 cut(s)	593, 1481, 2058, 2140, 2511
BspANI	GGCC	4 cut(s)	804, 918, 1516, 1978
BspCNI	CTCAG	4 cut(s)	1328, 1863, 2103, 2372
BspEI	TCCGGA	2 cut(s)	1228, 1305
BspFNI	CGCG	2 cut(s)	400, 593
BspLI	GGNNCC	7 cut(s)	198, 421, 455, 710, 1968, 2278, 2675
BspMAI	CTGCAG	1 cut(s)	1888
BspMI	ACCTGC	1 cut(s)	2504
BspOI	GCTAGC	1 cut(s)	1845
BspPI	GGATC	4 cut(s)	1342, 1465, 1961, 1974
BspQI	GCTCTTC	1 cut(s)	1884
BspT104I	TTCGAA	1 cut(s)	1655
BspT107I	GGYRCC	2 cut(s)	708, 2276
BspTI	CTTAAG	1 cut(s)	1961
BspTNI	GGTCTC	1 cut(s)	1319
BsrDI	GCAATG	4 cut(s)	393, 969, 1305, 2237
BsrFI	RCCGGY	2 cut(s)	2039, 2267
BsrGI	TGTACA	3 cut(s)	1509, 1711, 2427
BsrI	ACTGG	6 cut(s)	339, 1504, 1721, 2101, 2169, 2630
BssAI	RCCGGY	2 cut(s)	2039, 2267
BssECI	CCNNGG	2 cut(s)	1113, 1329
BssMI	GATC	9 cut(s)	259, 277, 769, 1334, 1470, 1539, 1966, 2370, 2487
BssNI	GRCGYC	1 cut(s)	709
BssSI	CACGAG	2 cut(s)	407, 988
BssT1I	CCWWGG	1 cut(s)	1329
Bst2BI	CACGAG	2 cut(s)	407, 988
Bst2UI	CCWGG	2 cut(s)	311, 1980
Bst4CI	ACNGT	6 cut(s)	196, 575, 648, 911, 2404, 2467
Bst6I	CTCTTC	4 cut(s)	1271, 1613, 1884, 2151
BstACI	GRCGYC	1 cut(s)	709
BstAFI	CTTAAG	1 cut(s)	1961
BstAUI	TGTACA	3 cut(s)	1509, 1711, 2427
BstBAI	YACGTR	1 cut(s)	1639
BstBI	TTCGAA	1 cut(s)	1655
BstC8I	GCNNGC	3 cut(s)	24, 1011, 1843
BstDEI	CTNAG	6 cut(s)	1243, 1315, 1398, 1850, 2090, 2359
BstDSI	CCRYGG	1 cut(s)	1329
BstF5I	GGATG	4 cut(s)	927, 1123, 1798, 2383
BstFNI	CGCG	2 cut(s)	400, 593
BstH2I	RGCGCY	2 cut(s)	712, 2648
BstHHI	GCGC	3 cut(s)	400, 711, 2647
BstKTI	GATC	9 cut(s)	262, 280, 772, 1337, 1473, 1542, 1969, 2373, 2490
BstMAI	GTCTC	3 cut(s)	593, 1319, 2155
BstMBI	GATC	9 cut(s)	259, 277, 769, 1334, 1470, 1539, 1966, 2370, 2487
BstMWI	GCNNNNNNNGC	5 cut(s)	173, 978, 1854, 2396, 2510
BstNI	CCWGG	2 cut(s)	311, 1980
BstNSI	RCATGY	2 cut(s)	26, 2110
BstSCI	CCNGG	2 cut(s)	309, 1978
BstSFI	CTRYAG	3 cut(s)	631, 1884, 2400
BstUI	CGCG	2 cut(s)	400, 593
BstV2I	GAAGAC	1 cut(s)	2193
BstX2I	RGATCY	3 cut(s)	1334, 1539, 1966
BstYI	RGATCY	3 cut(s)	1334, 1539, 1966
BsuI	GTATCC	1 cut(s)	2079
BsuRI	GGCC	4 cut(s)	804, 918, 1516, 1978
BtgI	CCRYGG	1 cut(s)	1329
BtrI	CACGTC	1 cut(s)	1016
BtsCI	GGATG	4 cut(s)	927, 1123, 1798, 2383
BtsI	GCAGTG	3 cut(s)	1764, 2124, 2268
BtsIMutI	CAGTG	8 cut(s)	273, 1714, 1764, 2073, 2124, 2268, 2400, 2637
BveI	ACCTGC	1 cut(s)	2504
Cac8I	GCNNGC	3 cut(s)	24, 1011, 1843
CfoI	GCGC	3 cut(s)	400, 711, 2647
Cfr10I	RCCGGY	2 cut(s)	2039, 2267
Cfr13I	GGNCC	2 cut(s)	1090, 1303
Csp6I	GTAC	8 cut(s)	1138, 1353, 1368, 1510, 1583, 1712, 2277, 2428
CspAI	ACCGGT	1 cut(s)	2267
CspCI	CAANNNNNGTGG	2 cut(s)	1197, 1232
CviQI	GTAC	8 cut(s)	1138, 1353, 1368, 1510, 1583, 1712, 2277, 2428
DdeI	CTNAG	6 cut(s)	1243, 1315, 1398, 1850, 2090, 2359
DinI	GGCGCC	1 cut(s)	710
DpnI	GATC	9 cut(s)	261, 279, 771, 1336, 1472, 1541, 1968, 2372, 2489
DpnII	GATC	9 cut(s)	259, 277, 769, 1334, 1470, 1539, 1966, 2370, 2487
DriI	GACNNNNNGTC	1 cut(s)	658
EaeI	YGGCCR	2 cut(s)	916, 1976
Eam1104I	CTCTTC	4 cut(s)	1271, 1613, 1884, 2151
Eam1105I	GACNNNNNGTC	1 cut(s)	658
EarI	CTCTTC	4 cut(s)	1271, 1613, 1884, 2151
Ecl136II	GAGCTC	2 cut(s)	2358, 2579
Eco130I	CCWWGG	1 cut(s)	1329
Eco147I	AGGCCT	1 cut(s)	1516
Eco24I	GRGCYC	2 cut(s)	2360, 2581
Eco31I	GGTCTC	1 cut(s)	1319
Eco32I	GATATC	1 cut(s)	748
Eco47I	GGWCC	2 cut(s)	1090, 1303
Eco53kI	GAGCTC	2 cut(s)	2358, 2579
Eco57I	CTGAAG	2 cut(s)	408, 2376
EcoICRI	GAGCTC	2 cut(s)	2358, 2579
EcoRI	GAATTC	1 cut(s)	2135
EcoRII	CCWGG	2 cut(s)	309, 1978
EcoRV	GATATC	1 cut(s)	748
EcoT14I	CCWWGG	1 cut(s)	1329
EcoT22I	ATGCAT	1 cut(s)	1859
EcoT38I	GRGCYC	2 cut(s)	2360, 2581
EgeI	GGCGCC	1 cut(s)	710
EheI	GGCGCC	1 cut(s)	710
ErhI	CCWWGG	1 cut(s)	1329
FaqI	GGGAC	2 cut(s)	907, 2507
FbaI	TGATCA	4 cut(s)	259, 769, 2370, 2487
FblI	GTMKAC	4 cut(s)	403, 819, 1237, 1464
FokI	GGATG	4 cut(s)	934, 1130, 1805, 2390
FriOI	GRGCYC	2 cut(s)	2360, 2581
FspBI	CTAG	9 cut(s)	69, 126, 797, 926, 1019, 1518, 1679, 1742, 1842
GlaI	GCGC	3 cut(s)	399, 710, 2646
GsaI	CCCAGC	1 cut(s)	66
GsuI	CTGGAG	2 cut(s)	332, 2186
HaeII	RGCGCY	2 cut(s)	712, 2648
HaeIII	GGCC	4 cut(s)	804, 918, 1516, 1978
HapII	CCGG	5 cut(s)	919, 1229, 1306, 2040, 2268
HhaI	GCGC	3 cut(s)	400, 711, 2647
Hin1I	GRCGYC	1 cut(s)	709
Hin6I	GCGC	3 cut(s)	398, 709, 2645
HinP1I	GCGC	3 cut(s)	398, 709, 2645
HincII	GTYRAC	2 cut(s)	1465, 2176
HindII	GTYRAC	2 cut(s)	1465, 2176
HindIII	AAGCTT	1 cut(s)	2216
HinfI	GANTC	8 cut(s)	369, 824, 874, 1252, 1418, 1526, 1589, 2329
HpaII	CCGG	5 cut(s)	919, 1229, 1306, 2040, 2268
HphI	GGTGA	9 cut(s)	103, 225, 389, 755, 779, 1627, 2047, 2282, 2455
Hpy188I	TCNGA	7 cut(s)	1094, 1162, 1374, 1531, 1853, 2114, 2362
Hpy99I	CGWCG	1 cut(s)	1466
HpyCH4III	ACNGT	6 cut(s)	196, 575, 648, 911, 2404, 2467
HpyCH4IV	ACGT	2 cut(s)	1015, 1638
HpyF10VI	GCNNNNNNNGC	5 cut(s)	173, 978, 1854, 2396, 2510
HpyF3I	CTNAG	6 cut(s)	1243, 1315, 1398, 1850, 2090, 2359
HpySE526I	ACGT	2 cut(s)	1015, 1638
Hsp92I	GRCGYC	1 cut(s)	709
HspAI	GCGC	3 cut(s)	398, 709, 2645
KasI	GGCGCC	1 cut(s)	708
Kpn2I	TCCGGA	2 cut(s)	1228, 1305
KpnI	GGTACC	1 cut(s)	2280
Ksp22I	TGATCA	4 cut(s)	259, 769, 2370, 2487
Kzo9I	GATC	9 cut(s)	259, 277, 769, 1334, 1470, 1539, 1966, 2370, 2487
LguI	GCTCTTC	1 cut(s)	1884
LmnI	GCTCC	6 cut(s)	36, 313, 1433, 1724, 2114, 2576
LweI	GCATC	8 cut(s)	346, 347, 373, 546, 912, 1844, 1903, 2275
MaeI	CTAG	9 cut(s)	69, 126, 797, 926, 1019, 1518, 1679, 1742, 1842
MaeII	ACGT	2 cut(s)	1015, 1638
MaeIII	GTNAC	8 cut(s)	671, 845, 928, 1204, 1249, 1393, 1757, 2263
MalI	GATC	9 cut(s)	261, 279, 771, 1336, 1472, 1541, 1968, 2372, 2489
MboI	GATC	9 cut(s)	259, 277, 769, 1334, 1470, 1539, 1966, 2370, 2487
MfeI	CAATTG	1 cut(s)	1209
MflI	RGATCY	3 cut(s)	1334, 1539, 1966
MhlI	GDGCHC	2 cut(s)	2360, 2581
Mly113I	GGCGCC	1 cut(s)	709
MlyI	GAGTC	2 cut(s)	1246, 1598
MmeI	TCCRAC	3 cut(s)	447, 545, 1577
Mph1103I	ATGCAT	1 cut(s)	1859
MroI	TCCGGA	2 cut(s)	1228, 1305
MroXI	GAANNNNTTC	1 cut(s)	878
MseI	TTAA	5 cut(s)	1650, 1782, 1962, 2022, 2297
MspA1I	CMGCKG	2 cut(s)	782, 1199
MspCI	CTTAAG	1 cut(s)	1961
MspI	CCGG	5 cut(s)	919, 1229, 1306, 2040, 2268
MspR9I	CCNGG	2 cut(s)	311, 1980
MunI	CAATTG	1 cut(s)	1209
Mva1269I	GAATGC	2 cut(s)	97, 1629
MvaI	CCWGG	2 cut(s)	311, 1980
MvnI	CGCG	2 cut(s)	400, 593
MwoI	GCNNNNNNNGC	5 cut(s)	173, 978, 1854, 2396, 2510
NarI	GGCGCC	1 cut(s)	709
NcoI	CCATGG	1 cut(s)	1329
NdeII	GATC	9 cut(s)	259, 277, 769, 1334, 1470, 1539, 1966, 2370, 2487
NheI	GCTAGC	1 cut(s)	1841
NlaIV	GGNNCC	7 cut(s)	198, 421, 455, 710, 1968, 2278, 2675
NmuCI	GTSAC	4 cut(s)	845, 928, 1249, 2263
NsiI	ATGCAT	1 cut(s)	1859
NspI	RCATGY	2 cut(s)	26, 2110
NspV	TTCGAA	1 cut(s)	1655
PaeI	GCATGC	1 cut(s)	26
PceI	AGGCCT	1 cut(s)	1516
PciI	ACATGT	1 cut(s)	2106
PciSI	GCTCTTC	1 cut(s)	1884
PctI	GAATGC	2 cut(s)	97, 1629
PdmI	GAANNNNTTC	1 cut(s)	878
PfeI	GAWTC	6 cut(s)	369, 824, 874, 1418, 1526, 2329
PflMI	CCANNNNNTGG	2 cut(s)	310, 785
PfoI	TCCNGGA	1 cut(s)	309
PinAI	ACCGGT	1 cut(s)	2267
PleI	GAGTC	2 cut(s)	1246, 1597
PluTI	GGCGCC	1 cut(s)	712
PpsI	GAGTC	2 cut(s)	1246, 1597
Ppu21I	YACGTR	1 cut(s)	1639
PscI	ACATGT	1 cut(s)	2106
Psp124BI	GAGCTC	2 cut(s)	2360, 2581
Psp6I	CCWGG	2 cut(s)	309, 1978
PspFI	CCCAGC	1 cut(s)	62
PspGI	CCWGG	2 cut(s)	309, 1978
PspN4I	GGNNCC	7 cut(s)	198, 421, 455, 710, 1968, 2278, 2675
PspPI	GGNCC	2 cut(s)	1090, 1303
PstI	CTGCAG	1 cut(s)	1888
PsuI	RGATCY	3 cut(s)	1334, 1539, 1966
PvuII	CAGCTG	2 cut(s)	782, 1199
RsaI	GTAC	8 cut(s)	1139, 1354, 1369, 1511, 1584, 1713, 2278, 2429
RsaNI	GTAC	8 cut(s)	1138, 1353, 1368, 1510, 1583, 1712, 2277, 2428
SacI	GAGCTC	2 cut(s)	2360, 2581
SalI	GTCGAC	1 cut(s)	1463
SapI	GCTCTTC	1 cut(s)	1884
SaqAI	TTAA	5 cut(s)	1650, 1782, 1962, 2022, 2297
Sau3AI	GATC	9 cut(s)	259, 277, 769, 1334, 1470, 1539, 1966, 2370, 2487
Sau96I	GGNCC	2 cut(s)	1090, 1303
SchI	GAGTC	2 cut(s)	1246, 1598
ScrFI	CCNGG	2 cut(s)	311, 1980
SduI	GDGCHC	2 cut(s)	2360, 2581
SfaNI	GCATC	8 cut(s)	346, 347, 373, 546, 912, 1844, 1903, 2275
SfcI	CTRYAG	3 cut(s)	631, 1884, 2400
SfoI	GGCGCC	1 cut(s)	710
SfuI	TTCGAA	1 cut(s)	1655
SinI	GGWCC	2 cut(s)	1090, 1303
SmlI	CTYRAG	1 cut(s)	1961
SmoI	CTYRAG	1 cut(s)	1961
SpeI	ACTAGT	1 cut(s)	68
SphI	GCATGC	1 cut(s)	26
SseBI	AGGCCT	1 cut(s)	1516
SsiI	CCGC	5 cut(s)	593, 1481, 2058, 2140, 2511
SspDI	GGCGCC	1 cut(s)	708
SspI	AATATT	1 cut(s)	726
SspMI	CTAG	9 cut(s)	69, 126, 797, 926, 1019, 1518, 1679, 1742, 1842
SstI	GAGCTC	2 cut(s)	2360, 2581
StuI	AGGCCT	1 cut(s)	1516
StyD4I	CCNGG	2 cut(s)	309, 1978
StyI	CCWWGG	1 cut(s)	1329
TaaI	ACNGT	6 cut(s)	196, 575, 648, 911, 2404, 2467
TaiI	ACGT	2 cut(s)	1018, 1641
TaqI	TCGA	4 cut(s)	662, 1464, 1592, 1655
TatI	WGTACW	6 cut(s)	1137, 1352, 1509, 1582, 1711, 2427
TfiI	GAWTC	6 cut(s)	369, 824, 874, 1418, 1526, 2329
Tru1I	TTAA	5 cut(s)	1650, 1782, 1962, 2022, 2297
Tru9I	TTAA	5 cut(s)	1650, 1782, 1962, 2022, 2297
TscAI	CASTG	8 cut(s)	280, 1721, 1771, 2080, 2124, 2268, 2400, 2637
TseFI	GTSAC	4 cut(s)	845, 928, 1249, 2263
Tsp45I	GTSAC	4 cut(s)	845, 928, 1249, 2263
TspRI	CASTG	8 cut(s)	280, 1721, 1771, 2080, 2124, 2268, 2400, 2637
Van91I	CCANNNNNTGG	2 cut(s)	310, 785
Vha464I	CTTAAG	1 cut(s)	1961
VpaK11BI	GGWCC	2 cut(s)	1090, 1303
XapI	RAATTY	4 cut(s)	29, 1913, 2135, 2181
XbaI	TCTAGA	3 cut(s)	125, 796, 1018
XceI	RCATGY	2 cut(s)	26, 2110
XmiI	GTMKAC	4 cut(s)	403, 819, 1237, 1464
XmnI	GAANNNNTTC	1 cut(s)	878
XspI	CTAG	9 cut(s)	69, 126, 797, 926, 1019, 1518, 1679, 1742, 1842
Zsp2I	ATGCAT	1 cut(s)	1859

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.