RLG00000010067

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
62640789 .. 62643689
2901 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010067

Sequence Viewer

Length: 2901 bp
ATGAGTAGCAGCACTGTAAGTGCAGATTTGAATCTCGCTGAGCTCAACAAGGGGTTCAAAATCGATAACAAATGCCTCACTCAACTCATGAAGGAGAAGAATCTAAACCTGATTCAAGAGCTCGGAGGCACTAATGGTATTGCGTCAGCTCTTGAAGCCGGCAGTGAGCGTGGAGTCCATGATGAAAAGGACAACATTGCTCGCCACCGTGAAGCATTTGGCTCAAACACGTATAGCAAACCACCTTCGCAAAGCCTTTTCCATTTTATGTGGCAAGCCTCTAAGGACCTCACTATTGTCATCCTCCTAGGCTGCGCTGCGCTTTCGCTTGGCTTTGGCATCAAGCAAGATGGACTCAAAGAAGGTTGGTATGATGGTGGAAGCATCTTCATTGCTGTTGTTCTCATCGTTGCTATATCTGCCTTTAGTGACTACAGACAGAACAAGCAGTTCGAAAAGCTGTCCAAAGCAAGTGATGATATCCCAATAGATGTTGTAAGAGGTGGAAGAAGACAGAAGGTTTCCATCTTTGAAATTGTAGTTGGAGATGTTGTGTTTCTGAAGATTGGAGACCAAGTTCCTGCCGATGGATTGTTCTTATATGGACATTCGTTGCGAGTAGACGAATCAAGCATGACAGGGGAGAGTGACCATGTGGAGGTTGATTGCAGCAACAATCCATTCTTGTATTCTGGAACCAAAGTGGTTGATGGATACGGCCGAATGCTTGTGACTTCAGTAGGGATGAACTCAAGTTGGGGCCAAATGATGAGCTTGATCAGCCATGAAAACAATGAGCAGACACCTTTACAAGAAAAGCTTAGTAAGTTCACTCCATTACTTGCTAAGATTGGCTTGGCAGTTGCATTCATGGTCTTTGTGGTGCTGTTAGTTCGTTACTTCACAGGAAACACAAAGAGTGAGAATGGAAGTTTTGGTAAGTTCAAGGGTGGCAAGACGAGGATTGATGATGTGGCCAATGCCTTGTTGGATATGGTAGCAGTTGCTGTCATTATTGTTGTGATTGCAATTCCAGAAGGGTTTCCACTGGCTGTGACTCTAACTCTTGCTTACTCAATGAAGAAAATGATGGCGGATCATGCATTGGTTCGGAGGCTCTCAGCTTGCGAGACTATGGGATGTGCCACCATAATCTGTACAGACAAAACAGGTACTCTCACACTCAACGAGATGAAGGTTGTGAAGTTTTGGATTGGAAAGGAAAGTGTGGAAGATGATGCTGCCCATTCATCAATTCCTGTTAGTATTCTTGATTTGATCAGAGAAGGGGTAGCATTCAACACAACAGGAAGTGTTTACAAGCCTAACTCAGGATCAGGGTTTGAGTTTTCCGGCAGTCCTACTGAAAAGGCCATTCTTTCATGGGCTGCACTTGAGCTGAACATGGACATCGATGAGTTGAAACAGAACAGTTTCATTCAACATGTAGAGGCCTTCAATTCACAGAAGAAGCGAAGCGGGGTTTTGGTGAGAAGGAAGAAAGACAATACAATCCATGTTCATTGGAAAGGAGCTGCGGAGATGATAGTAGACATGTGCTCAAGTTACTACGATGCCTCTGGTGTTACCAATGATCTTGGTGAAGATGAAAGGAAGCAGTTCAAGAAAATTGTTCAAGGTATGGCAGCAAGCAGTCTCAGATGCATTGCTTTTGCACACAAACAAGTTCGAGAAAGCAATGATGAAAATGATAGCAAGATGCTGGAAGAGCACAAATTGATCCTATTAGGCCTGGTGGGTTTGAAGGACCCATGTAGGCCAGGAGTGAGAGAGGCAGTACAAGCTTGCCAGTTTGCCGGGGTTCAAGTAAAACTGATCACCGGTGACAATGTGTTTACCGCTAAAGCCATAGCTACTGAGTGTGGGATACTGAGGCCTAATGACCATGAAATGGTAAGGGAAGCAGTGGTAGAAGGTGAAGAATTTCGAAACTACACACCAGAGCAGAGAATGCAGAGAGTTGATGGAATTCGTGTGATGGCAAGGTCTTCTCCATTTGATAAGCTTTTGATGGTGCAGTGCTTAAAACAGAAAGGGCATGTGGTTGCTGTGACCGGTGATGGCACAAATGATGCACCAGCGCTGAAGGAAGCCGATATAGGACTCTCGATGGGGATTCAAGGTACCGAAGTGGCCAAGGAGAGTTCAGACATTGTGATCCTCGATGACAACTTTGCTACTGTGGTCACTGTTTTAAGGTGGGGAAGAGGTGTCTATGCCAACATTCAGAAGTTTGTGCAATTCCAGCTCACAATAAATGTTGCCACTCTTGTAGTCAACTTTGTGGCAGCAGCTTCAGCTGGTGAAGTGCCTTTAACAGCAGTCCAGTTGCTGTGGGTGAATCTGATAATGGACACGATGGCTGCTCTTGCTCTTGCCACAGATAAGCCAACCAAAGAACTCATGGAAAGGCCACCAGTGCTTCGATCTGAGCCTGTGATCACATACCTCATGTGGAGGAACGTTTTCGCTCAAGCTTTGTTCCAGGTAGCTGTGCTCTTGATCTTGCAGTTCAAAGGCAGATCAATCTTTGGTGTTAGTGAGAAGGTAAACAATACTATGATCTTCAACGTCTTTGTCCTGTGCCAAGTGTTCAATGAATTCAATGCAAGGAGTGTTGAGAAGAAGAATGTCCTCAAAGGGAGTCACAAGAACAAGTTGTTTTGGGCGATCGTTGGTATCACCATTATAGTTCAGGTGGTTATGGTGGAGATTCTGAAGAAGTTTGCAGATACAGAGAGGTTAAGTTGGGGTCAATGGGGTGCTTGCATTGGAATTTCAGCCATATCTTGCCCAATCAGTTGGGTTGTCAAGTGTATACCAGTTCCTGCGAAGCCGAAATTCGGCTATCTAAAGAAGGATAAAACAATCACACCATAG

Protein Analysis

967

Amino Acids

106.16

Weight (kDa)

7.51

Isoelectric Point (pI)

28.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 41 - 109 1.8e-09 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 164 - 260 1.4e-21 P-type ATPase actuator domain
Hydrolase PF00702 384 - 706 4.2e-14 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 425 - 594 3.8e-30 P-type ATPase, cytoplasmic domain N
Cation_ATPase_C PF00689 777 - 946 8.6e-49 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2144
AccB1I GGYRCC 1 cut(s) 2144
AccB7I CCANNNNNTGG 1 cut(s) 1912
AccI GTMKAC 3 cut(s) 621, 1551, 2839
AciI CCGC 4 cut(s) 1094, 1479, 1538, 1860
AclI AACGTT 1 cut(s) 2484
AclWI GGATC 4 cut(s) 1104, 1342, 1735, 2173
AcoI YGGCCR 3 cut(s) 718, 975, 2154
AcsI RAATTY 5 cut(s) 1943, 1989, 2621, 2796, 2861
AcuI CTGAAG 5 cut(s) 581, 720, 2126, 2301, 2759
AfaI GTAC 4 cut(s) 1159, 1174, 1800, 2146
AfeI AGCGCT 1 cut(s) 2103
AfiI CCNNNNNNNGG 5 cut(s) 587, 658, 1331, 1912, 2864
AflIII ACRYGT 3 cut(s) 228, 1444, 1554
AgeI ACCGGT 2 cut(s) 1841, 2075
AjnI CCWGG 3 cut(s) 1752, 1780, 2505
AjuI GAANNNNNNNTTGG 2 cut(s) 525, 557
AloI GAACNNNNNNTCC 2 cut(s) 561, 593
Alw21I GWGCWC 5 cut(s) 45, 123, 1562, 1734, 2520
Alw26I GTCTC 3 cut(s) 564, 1124, 1661
AlwI GGATC 4 cut(s) 1104, 1342, 1735, 2173
AlwNI CAGNNNCTG 3 cut(s) 1007, 2353, 2849
Aor51HI AGCGCT 1 cut(s) 2103
ApoI RAATTY 5 cut(s) 1943, 1989, 2621, 2796, 2861
AsiGI ACCGGT 2 cut(s) 1841, 2075
Asp700I GAANNNNTTC 5 cut(s) 1041, 1433, 1619, 1944, 2486
Asp718I GGTACC 1 cut(s) 2144
AspA2I CCTAGG 1 cut(s) 307
AspLEI GCGC 3 cut(s) 317, 322, 2104
AspS9I GGNCC 3 cut(s) 286, 760, 1768
AsuC2I CCSGG 1 cut(s) 1819
AsuHPI GGTGA 9 cut(s) 1501, 1613, 1831, 1856, 1949, 2090, 2336, 2371, 2695
AsuII TTCGAA 2 cut(s) 453, 1948
AvaII GGWCC 2 cut(s) 286, 1768
AvrII CCTAGG 1 cut(s) 307
BaeI ACNNNNGTAYC 2 cut(s) 2136, 2169
BalI TGGCCA 2 cut(s) 977, 2156
BanI GGYRCC 1 cut(s) 2144
BanII GRGCYC 2 cut(s) 45, 123
BbsI GAAGAC 2 cut(s) 517, 2001
Bbv12I GWGCWC 5 cut(s) 45, 123, 1562, 1734, 2520
BceAI ACGGC 1 cut(s) 733
BciT130I CCWGG 3 cut(s) 1754, 1782, 2507
BciVI GTATCC 2 cut(s) 707, 1881
BclI TGATCA 4 cut(s) 777, 1278, 1836, 2460
BcnI CCSGG 1 cut(s) 1819
BcoDI GTCTC 3 cut(s) 564, 1124, 1661
BfaI CTAG 1 cut(s) 308
BfmI CTRYAG 1 cut(s) 433
BfoI RGCGCY 1 cut(s) 2105
BfuI GTATCC 2 cut(s) 707, 1881
BlnI CCTAGG 1 cut(s) 307
BlpI GCTNAGC 1 cut(s) 39
Bme1390I CCNGG 4 cut(s) 1754, 1782, 1819, 2507
Bme18I GGWCC 2 cut(s) 286, 1768
BmgT120I GGNCC 3 cut(s) 286, 760, 1768
BmiI GGNNCC 4 cut(s) 697, 761, 1770, 2146
BmrFI CCNGG 4 cut(s) 1754, 1782, 1819, 2507
BmsI GCATC 7 cut(s) 348, 393, 1228, 1564, 1652, 1710, 2083
BpiI GAAGAC 2 cut(s) 517, 2001
Bpu1102I GCTNAGC 1 cut(s) 39
Bpu14I TTCGAA 2 cut(s) 453, 1948
BpuEI CTTGAG 4 cut(s) 736, 1415, 1546, 2478
BpuMI CCSGG 1 cut(s) 1819
Bsa29I ATCGAT 2 cut(s) 63, 1413
BsaAI YACGTR 1 cut(s) 231
BsaBI GATNNNNATC 1 cut(s) 30
BsaI GGTCTC 1 cut(s) 564
BsaJI CCNNGG 3 cut(s) 307, 1818, 2157
BsaWI WCCGGW 2 cut(s) 1841, 2075
BsaXI ACNNNNNCTCC 4 cut(s) 537, 561, 567, 591
Bsc4I CCNNNNNNNGG 5 cut(s) 587, 658, 1331, 1912, 2864
Bse118I RCCGGY 3 cut(s) 158, 1841, 2075
Bse1I ACTGG 5 cut(s) 1053, 1810, 2347, 2438, 2843
Bse3DI GCAATG 4 cut(s) 195, 390, 1665, 1705
Bse8I GATNNNNATC 1 cut(s) 30
BseBI CCWGG 3 cut(s) 1754, 1782, 2507
BseCI ATCGAT 2 cut(s) 63, 1413
BseDI CCNNGG 3 cut(s) 307, 1818, 2157
BseGI GGATG 3 cut(s) 300, 750, 1145
BseJI GATNNNNATC 1 cut(s) 30
BseLI CCNNNNNNNGG 5 cut(s) 587, 658, 1331, 1912, 2864
BseMI GCAATG 4 cut(s) 195, 390, 1665, 1705
BseMII CTCAG 7 cut(s) 30, 1134, 1344, 1672, 1869, 1883, 2442
BseNI ACTGG 5 cut(s) 1053, 1810, 2347, 2438, 2843
BseX3I CGGCCG 1 cut(s) 718
BsgI GTGCAG 3 cut(s) 42, 1374, 2057
Bsh1285I CGRYCG 2 cut(s) 721, 2694
BshNI GGYRCC 1 cut(s) 2144
BshTI ACCGGT 2 cut(s) 1841, 2075
BshVI ATCGAT 2 cut(s) 63, 1413
BsiEI CGRYCG 2 cut(s) 721, 2694
BsiHKAI GWGCWC 5 cut(s) 45, 123, 1562, 1734, 2520
BsiSI CCGG 5 cut(s) 159, 1353, 1818, 1842, 2076
BslI CCNNNNNNNGG 5 cut(s) 587, 658, 1331, 1912, 2864
BsmAI GTCTC 3 cut(s) 564, 1124, 1661
BsmI GAATGC 4 cut(s) 729, 866, 1295, 1977
Bso31I GGTCTC 1 cut(s) 564
Bsp119I TTCGAA 2 cut(s) 453, 1948
Bsp1286I GDGCHC 5 cut(s) 45, 123, 1562, 1734, 2520
Bsp1407I TGTACA 1 cut(s) 1157
Bsp1720I GCTNAGC 1 cut(s) 39
BspACI CCGC 4 cut(s) 1094, 1479, 1538, 1860
BspCNI CTCAG 7 cut(s) 31, 1133, 1343, 1671, 1870, 1884, 2443
BspDI ATCGAT 2 cut(s) 63, 1413
BspHI TCATGA 1 cut(s) 87
BspLI GGNNCC 4 cut(s) 697, 761, 1770, 2146
BspPI GGATC 4 cut(s) 1104, 1342, 1735, 2173
BspQI GCTCTTC 1 cut(s) 1722
BspT104I TTCGAA 2 cut(s) 453, 1948
BspT107I GGYRCC 1 cut(s) 2144
BspTNI GGTCTC 1 cut(s) 564
BsrDI GCAATG 4 cut(s) 195, 390, 1665, 1705
BsrFI RCCGGY 3 cut(s) 158, 1841, 2075
BsrGI TGTACA 1 cut(s) 1157
BsrI ACTGG 5 cut(s) 1053, 1810, 2347, 2438, 2843
BssAI RCCGGY 3 cut(s) 158, 1841, 2075
BssECI CCNNGG 3 cut(s) 307, 1818, 2157
BssNAI GTATAC 1 cut(s) 2840
BssT1I CCWWGG 2 cut(s) 307, 2157
Bst1107I GTATAC 1 cut(s) 2840
Bst2UI CCWGG 3 cut(s) 1754, 1782, 2507
Bst4CI ACNGT 5 cut(s) 16, 209, 1433, 2203, 2212
Bst6I CTCTTC 2 cut(s) 1722, 2221
BstAPI GCANNNNNTGC 1 cut(s) 1972
BstAUI TGTACA 1 cut(s) 1157
BstBAI YACGTR 1 cut(s) 231
BstBI TTCGAA 2 cut(s) 453, 1948
BstC8I GCNNGC 7 cut(s) 160, 202, 276, 1126, 1651, 1807, 2788
BstENI CCTNNNNNAGG 1 cut(s) 1329
BstF5I GGATG 3 cut(s) 300, 750, 1145
BstH2I RGCGCY 1 cut(s) 2105
BstHHI GCGC 3 cut(s) 317, 322, 2104
BstMAI GTCTC 3 cut(s) 564, 1124, 1661
BstMCI CGRYCG 2 cut(s) 721, 2694
BstNI CCWGG 3 cut(s) 1754, 1782, 2507
BstNSI RCATGY 3 cut(s) 1448, 1558, 2063
BstSCI CCNGG 4 cut(s) 1752, 1780, 1817, 2505
BstSFI CTRYAG 1 cut(s) 433
BstV2I GAAGAC 2 cut(s) 517, 2001
BstXI CCANNNNNNTGG 1 cut(s) 2823
BstZ17I GTATAC 1 cut(s) 2840
BstZI CGGCCG 1 cut(s) 718
Bsu15I ATCGAT 2 cut(s) 63, 1413
BsuI GTATCC 2 cut(s) 707, 1881
BsuTUI ATCGAT 2 cut(s) 63, 1413
BtsCI GGATG 3 cut(s) 300, 750, 1145
BtsI GCAGTG 3 cut(s) 169, 1932, 2045
BtsIMutI CAGTG 7 cut(s) 12, 169, 1046, 1932, 2045, 2208, 2445
Cac8I GCNNGC 7 cut(s) 160, 202, 276, 1126, 1651, 1807, 2788
CaiI CAGNNNCTG 3 cut(s) 1007, 2353, 2849
CciI TCATGA 1 cut(s) 87
CfoI GCGC 3 cut(s) 317, 322, 2104
Cfr10I RCCGGY 3 cut(s) 158, 1841, 2075
Cfr13I GGNCC 3 cut(s) 286, 760, 1768
ClaI ATCGAT 2 cut(s) 63, 1413
CseI GACGC 1 cut(s) 132
Csp6I GTAC 4 cut(s) 1158, 1173, 1799, 2145
CspAI ACCGGT 2 cut(s) 1841, 2075
CviQI GTAC 4 cut(s) 1158, 1173, 1799, 2145
EaeI YGGCCR 3 cut(s) 718, 975, 2154
EagI CGGCCG 1 cut(s) 718
Eam1104I CTCTTC 2 cut(s) 1722, 2221
EarI CTCTTC 2 cut(s) 1722, 2221
EciI GGCGGA 1 cut(s) 1109
Ecl136II GAGCTC 2 cut(s) 43, 121
EclXI CGGCCG 1 cut(s) 718
Eco130I CCWWGG 2 cut(s) 307, 2157
Eco147I AGGCCT 3 cut(s) 1454, 1752, 1897
Eco24I GRGCYC 2 cut(s) 45, 123
Eco31I GGTCTC 1 cut(s) 564
Eco32I GATATC 1 cut(s) 481
Eco47I GGWCC 2 cut(s) 286, 1768
Eco47III AGCGCT 1 cut(s) 2103
Eco52I CGGCCG 1 cut(s) 718
Eco53kI GAGCTC 2 cut(s) 43, 121
Eco57I CTGAAG 5 cut(s) 581, 720, 2126, 2301, 2759
EcoICRI GAGCTC 2 cut(s) 43, 121
EcoNI CCTNNNNNAGG 1 cut(s) 1329
EcoO109I RGGNCCY 2 cut(s) 286, 1768
EcoRI GAATTC 2 cut(s) 1989, 2621
EcoRII CCWGG 3 cut(s) 1752, 1780, 2505
EcoRV GATATC 1 cut(s) 481
EcoT14I CCWWGG 2 cut(s) 307, 2157
EcoT22I ATGCAT 2 cut(s) 1105, 1667
EcoT38I GRGCYC 2 cut(s) 45, 123
ErhI CCWWGG 2 cut(s) 307, 2157
FalI AAGNNNNNCTT 4 cut(s) 804, 836, 839, 871
FauI CCCGC 1 cut(s) 1472
FbaI TGATCA 4 cut(s) 777, 1278, 1836, 2460
FblI GTMKAC 3 cut(s) 621, 1551, 2839
FokI GGATG 3 cut(s) 287, 757, 1152
FriOI GRGCYC 2 cut(s) 45, 123
FspBI CTAG 1 cut(s) 308
GlaI GCGC 3 cut(s) 316, 321, 2103
HaeII RGCGCY 1 cut(s) 2105
HapII CCGG 5 cut(s) 159, 1353, 1818, 1842, 2076
HgaI GACGC 1 cut(s) 132
HhaI GCGC 3 cut(s) 317, 322, 2104
Hin6I GCGC 3 cut(s) 315, 320, 2102
HinP1I GCGC 3 cut(s) 315, 320, 2102
HincII GTYRAC 1 cut(s) 2299
HindII GTYRAC 1 cut(s) 2299
HindIII AAGCTT 4 cut(s) 818, 1803, 2024, 2496
HpaII CCGG 5 cut(s) 159, 1353, 1818, 1842, 2076
HphI GGTGA 9 cut(s) 1501, 1613, 1831, 1856, 1949, 2090, 2336, 2371, 2695
Hpy166II GTNNAC 8 cut(s) 622, 831, 1318, 1552, 1857, 2299, 2572, 2840
Hpy8I GTNNAC 8 cut(s) 622, 831, 1318, 1552, 1857, 2299, 2572, 2840
HpyCH4III ACNGT 5 cut(s) 16, 209, 1433, 2203, 2212
HpyCH4IV ACGT 3 cut(s) 230, 2484, 2592
HpySE526I ACGT 3 cut(s) 230, 2484, 2592
HspAI GCGC 3 cut(s) 315, 320, 2102
KpnI GGTACC 1 cut(s) 2148
KroI GCCGGC 1 cut(s) 158
KroNI GCCGGC 1 cut(s) 160
Ksp22I TGATCA 4 cut(s) 777, 1278, 1836, 2460
LguI GCTCTTC 1 cut(s) 1722
LmnI GCTCC 1 cut(s) 1532
LweI GCATC 7 cut(s) 348, 393, 1228, 1564, 1652, 1710, 2083
MaeI CTAG 1 cut(s) 308
MaeII ACGT 3 cut(s) 230, 2484, 2592
MhlI GDGCHC 5 cut(s) 45, 123, 1562, 1734, 2520
MlsI TGGCCA 2 cut(s) 977, 2156
MluNI TGGCCA 2 cut(s) 977, 2156
MlyI GAGTC 5 cut(s) 183, 348, 1051, 2118, 2674
MmeI TCCRAC 2 cut(s) 523, 969
Mox20I TGGCCA 2 cut(s) 977, 2156
Mph1103I ATGCAT 2 cut(s) 1105, 1667
MroNI GCCGGC 1 cut(s) 158
MroXI GAANNNNTTC 5 cut(s) 1041, 1433, 1619, 1944, 2486
MscI TGGCCA 2 cut(s) 977, 2156
MseI TTAA 4 cut(s) 2045, 2216, 2336, 2765
Msp20I TGGCCA 2 cut(s) 977, 2156
MspA1I CMGCKG 1 cut(s) 2321
MspI CCGG 5 cut(s) 159, 1353, 1818, 1842, 2076
MspR9I CCNGG 4 cut(s) 1754, 1782, 1819, 2507
MteI GCGCNGCGC 1 cut(s) 318
Mva1269I GAATGC 4 cut(s) 729, 866, 1295, 1977
MvaI CCWGG 3 cut(s) 1754, 1782, 2507
NaeI GCCGGC 1 cut(s) 160
NciI CCSGG 1 cut(s) 1819
NgoMIV GCCGGC 1 cut(s) 158
NlaIV GGNNCC 4 cut(s) 697, 761, 1770, 2146
NmuCI GTSAC 8 cut(s) 428, 647, 730, 1054, 1844, 2071, 2206, 2666
NsiI ATGCAT 2 cut(s) 1105, 1667
NspI RCATGY 3 cut(s) 1448, 1558, 2063
NspV TTCGAA 2 cut(s) 453, 1948
PagI TCATGA 1 cut(s) 87
PceI AGGCCT 3 cut(s) 1454, 1752, 1897
PciI ACATGT 2 cut(s) 1444, 1554
PciSI GCTCTTC 1 cut(s) 1722
PctI GAATGC 4 cut(s) 729, 866, 1295, 1977
PdiI GCCGGC 1 cut(s) 160
PdmI GAANNNNTTC 5 cut(s) 1041, 1433, 1619, 1944, 2486
PfeI GAWTC 7 cut(s) 31, 100, 112, 626, 2137, 2362, 2734
PflMI CCANNNNNTGG 1 cut(s) 1912
PinAI ACCGGT 2 cut(s) 1841, 2075
Ple19I CGATCG 1 cut(s) 2694
PleI GAGTC 5 cut(s) 182, 348, 1051, 2118, 2673
PpsI GAGTC 5 cut(s) 182, 348, 1051, 2118, 2673
Ppu21I YACGTR 1 cut(s) 231
PpuMI RGGWCCY 2 cut(s) 286, 1768
PscI ACATGT 2 cut(s) 1444, 1554
Psp124BI GAGCTC 2 cut(s) 45, 123
Psp1406I AACGTT 1 cut(s) 2484
Psp5II RGGWCCY 2 cut(s) 286, 1768
Psp6I CCWGG 3 cut(s) 1752, 1780, 2505
PspGI CCWGG 3 cut(s) 1752, 1780, 2505
PspN4I GGNNCC 4 cut(s) 697, 761, 1770, 2146
PspPI GGNCC 3 cut(s) 286, 760, 1768
PspPPI RGGWCCY 2 cut(s) 286, 1768
PstNI CAGNNNCTG 3 cut(s) 1007, 2353, 2849
PvuI CGATCG 1 cut(s) 2694
PvuII CAGCTG 1 cut(s) 2321
RsaI GTAC 4 cut(s) 1159, 1174, 1800, 2146
RsaNI GTAC 4 cut(s) 1158, 1173, 1799, 2145
SacI GAGCTC 2 cut(s) 45, 123
SapI GCTCTTC 1 cut(s) 1722
SaqAI TTAA 4 cut(s) 2045, 2216, 2336, 2765
Sau96I GGNCC 3 cut(s) 286, 760, 1768
SchI GAGTC 5 cut(s) 183, 348, 1051, 2118, 2674
ScrFI CCNGG 4 cut(s) 1754, 1782, 1819, 2507
SduI GDGCHC 5 cut(s) 45, 123, 1562, 1734, 2520
SfaNI GCATC 7 cut(s) 348, 393, 1228, 1564, 1652, 1710, 2083
SfcI CTRYAG 1 cut(s) 433
SfuI TTCGAA 2 cut(s) 453, 1948
SgrAI CRCCGGYG 1 cut(s) 1841
SinI GGWCC 2 cut(s) 286, 1768
SmlI CTYRAG 4 cut(s) 751, 1394, 1561, 2493
SmoI CTYRAG 4 cut(s) 751, 1394, 1561, 2493
SseBI AGGCCT 3 cut(s) 1454, 1752, 1897
SsiI CCGC 4 cut(s) 1094, 1479, 1538, 1860
SspMI CTAG 1 cut(s) 308
SstI GAGCTC 2 cut(s) 45, 123
StuI AGGCCT 3 cut(s) 1454, 1752, 1897
StyD4I CCNGG 4 cut(s) 1752, 1780, 1817, 2505
StyI CCWWGG 2 cut(s) 307, 2157
TaaI ACNGT 5 cut(s) 16, 209, 1433, 2203, 2212
TaiI ACGT 3 cut(s) 233, 2487, 2595
TaqI TCGA 8 cut(s) 63, 453, 1413, 1690, 1948, 2129, 2184, 2446
TatI WGTACW 2 cut(s) 1157, 1798
TfiI GAWTC 7 cut(s) 31, 100, 112, 626, 2137, 2362, 2734
Tru1I TTAA 4 cut(s) 2045, 2216, 2336, 2765
Tru9I TTAA 4 cut(s) 2045, 2216, 2336, 2765
TscAI CASTG 7 cut(s) 19, 169, 1053, 1932, 2045, 2215, 2445
TseFI GTSAC 8 cut(s) 428, 647, 730, 1054, 1844, 2071, 2206, 2666
Tsp45I GTSAC 8 cut(s) 428, 647, 730, 1054, 1844, 2071, 2206, 2666
TspRI CASTG 7 cut(s) 19, 169, 1053, 1932, 2045, 2215, 2445
Van91I CCANNNNNTGG 1 cut(s) 1912
VpaK11BI GGWCC 2 cut(s) 286, 1768
XagI CCTNNNNNAGG 1 cut(s) 1329
XapI RAATTY 5 cut(s) 1943, 1989, 2621, 2796, 2861
XceI RCATGY 3 cut(s) 1448, 1558, 2063
XcmI CCANNNNNNNNNTGG 2 cut(s) 985, 2422
XmaJI CCTAGG 1 cut(s) 307
XmiI GTMKAC 3 cut(s) 621, 1551, 2839
XmnI GAANNNNTTC 5 cut(s) 1041, 1433, 1619, 1944, 2486
XspI CTAG 1 cut(s) 308
Zsp2I ATGCAT 2 cut(s) 1105, 1667
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.