Rroxscaffold_5G00334770

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Reverse (-)
2049415 .. 2051283
1869 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00334770.1

Sequence Viewer

Length: 1869 bp
ATGAGTAGGTCAACCTTCAGTGCCCTGCATGAAAAATTGGGAAGCAATGTTGGGTTGATTCTTGATGTTCCGAGCAGTAGTCTTGGCAAAAGCAAAAGAAAATGGCATTCTGCTTTCATTACCATCTATTGCTCTAGAGCCTTCCTCTCTTTACGACCTTCTACTCTTCCCAAACATACCAACTCCACATTCATATCTCGCACACTCTCTTACTCCATTGTTAGCGTCGAGCCAGTCTCGTTCCCAGCCGTTAATGGATTCCAAGCAGACCAAAAATGCCTCACTGAGCTTGTGAAGGAGAAAAATCTCAAGGAGCTCTCGGAGCTTGGAGGGGTTGAAGAAGTAGCATCAGCTCTCAAAACTGATGCAGAGCATGGAATCAAAGGTGATGATGCTGAAGATATTGCGCGCAGACACGAAGCATTTGGTTCCAATACATACAAGAAACCGCCAACGCAAGGATTCCTCCATTTTGTGTGGGAAGCCTTCAAAGACCTCACAATCCTAATCCTCTTGGGATGTGCTGCGCTTTCTCTAGGTTTCGGCATCAAAGAACATGGATTGAAAGACGGTTGGATTGACGGTGGAAGCATTTGTCTCGCAGTCATTCTGGTCATTTCTGTTTCAGCCATTAGCAACTACAGACAGAGCAGACAGTTTGACAAATTGTCCAAAGTCAGTAACAATCTCCAAATTGAGGCTGTGAGAAATGGAAGGCGCCAGCAGATTTCCATATTTGAAATTGTGGTAGGTGATGTCATTTGTTTGAAGATTGGAGACCAAGTTCCAGCTGATGGATTGCTTTTAGATGGCCATTCTTTATCAGTAGATGAATCAAGCATGACAGGGGAGAGCGACCATGTTGAGGTAAGTGTCACTGAGAATCCTTTCTTGTTCTCTGGGACTAAAATAGCTGATGGTTATGGTCGCATGCTTGTCACGTCAGTCGGGATGAACACAAACTGGGGTGAAATGATGAGCCAAATTAGCCAAGACACCAGTGAAAAGACACCTCTGCAAGCACGTTTAGACAAGCTAACTTCGTCCATCGGTAAAGTTGGTTTGGCAGTTGCTTTCTTTGTTCTTGTAGTCATGCTGGTCCGATACTTCACAGGGAATACAGAGGATGAGAATGGAAACAAAGAGTACAATGGCAGCAAGACAAAATCTAATGGCATAATAAATGCCGTTATTGGGATTGTAGCAGCTGCTGTTACAATTGTTGTGGTGGCAATTCCAGAAGGTCTACCATTAGCTGTGACTCTCACTCTTGCTTATTCCATGAAGAGAATGATGGTTGATAACGCAATGGTGCGGAAGCTCTCTGCTTGTGAGACCATGGGATCTGCTACAACAATTTGTACTGACAAAACAGGTACTCTGACCATGAACCAGATGAAGGTGACTAAGGTTTGGTTGGGGAAAGAATGTGTGGAAGAAGAAGCTTATTCATCCATCTCTCCTTATGTTCTTGACTTGATCCAAGAAGGGGTTGCTCTTAATACAACTGGTGGTGTGTACAGGCCTAGCTTGGATTCTGAAATTGAGATCTCAGGCAGTCCAACTGAAAAGGCTATTCTTTCATGGGCGGTACATGGGTCGAACATGGATATGGAGAAAGTCGTGAAGAGTTGTAGCATTCTCCACGTTGAAGCCTTTAATTCGAAGAAGAAACAGAGTGGAGTTCTGGTGAAGAGAAAGGCTGATAACTCAGTCCATGTACACTGGAAAGGGGCAGCAGAGATGATACTAGCAATGTGCACAGGTTACTACAATGCCTCTGGAGTTGTTAAGGATATGGATGAGAATGAAAAAGGAACTTTGAGCAGATTATTCAAGGTATGGCAGCTAGCAGCCTCAGATGCATAG

Protein Analysis

622

Amino Acids

67.5

Weight (kDa)

6.39

Isoelectric Point (pI)

31.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 109 - 178 2.3e-15 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 234 - 329 1.7e-21 P-type ATPase actuator domain
Cation_ATPase PF13246 492 - 608 9.6e-13 P-type ATPase, cytoplasmic domain N
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 717
AccB7I CCANNNNNTGG 1 cut(s) 794
AccI GTMKAC 1 cut(s) 1246
AccII CGCG 1 cut(s) 409
AciI CCGC 3 cut(s) 449, 1315, 1589
AclWI GGATC 2 cut(s) 1351, 1474
AcoI YGGCCR 1 cut(s) 811
AcuI CTGAAG 1 cut(s) 417
AcyI GRCGYC 1 cut(s) 718
AfaI GTAC 6 cut(s) 1148, 1363, 1378, 1520, 1593, 1722
AfiI CCNNNNNNNGG 7 cut(s) 458, 697, 794, 865, 1194, 1399, 1489
AgsI TTSAA 7 cut(s) 338, 490, 565, 740, 769, 1652, 1837
AhdI GACNNNNNGTC 1 cut(s) 667
AjiI CACGTC 1 cut(s) 942
AjuI GAANNNNNNNTTGG 2 cut(s) 173, 205
AloI GAACNNNNNNTCC 2 cut(s) 768, 800
Alw21I GWGCWC 2 cut(s) 318, 1763
Alw26I GTCTC 4 cut(s) 241, 602, 771, 1328
Alw44I GTGCAC 1 cut(s) 1759
AlwI GGATC 2 cut(s) 1351, 1474
AlwNI CAGNNNCTG 1 cut(s) 1211
AoxI GGCC 2 cut(s) 811, 1523
ApaLI GTGCAC 1 cut(s) 1759
ApeKI GCWGC 7 cut(s) 524, 1155, 1205, 1208, 1736, 1846, 1853
Asp700I GAANNNNTTC 1 cut(s) 887
AspLEI GCGC 4 cut(s) 409, 411, 529, 720
AspS9I GGNCC 1 cut(s) 1099
AsuHPI GGTGA 5 cut(s) 398, 764, 980, 1414, 1702
AsuII TTCGAA 1 cut(s) 1664
AsuNHI GCTAGC 1 cut(s) 1849
AvaII GGWCC 1 cut(s) 1099
BaeGI GKGCMC 2 cut(s) 25, 1763
BaeI ACNNNNGTAYC 2 cut(s) 1583, 1616
BalI TGGCCA 1 cut(s) 813
BanI GGYRCC 1 cut(s) 717
BanII GRGCYC 1 cut(s) 318
Bbv12I GWGCWC 2 cut(s) 318, 1763
BbvI GCAGC 7 cut(s) 511, 1167, 1195, 1217, 1748, 1858, 1865
BccI CCATC 7 cut(s) 131, 788, 803, 911, 1055, 1288, 1463
BceAI ACGGC 2 cut(s) 233, 1172
BcgI CGANNNNNNTGC 2 cut(s) 580, 614
BcoDI GTCTC 4 cut(s) 241, 602, 771, 1328
BfaI CTAG 5 cut(s) 135, 536, 1527, 1751, 1850
BfmI CTRYAG 1 cut(s) 640
BfoI RGCGCY 1 cut(s) 721
BglII AGATCT 1 cut(s) 1548
BisI GCNGC 7 cut(s) 525, 1156, 1206, 1209, 1737, 1847, 1854
BlsI GCNGC 7 cut(s) 526, 1157, 1207, 1210, 1738, 1848, 1855
Bme18I GGWCC 1 cut(s) 1099
BmeRI GACNNNNNGTC 1 cut(s) 667
BmgBI CACGTC 1 cut(s) 942
BmgT120I GGNCC 1 cut(s) 1099
BmiI GGNNCC 2 cut(s) 430, 719
BmrI ACTGGG 1 cut(s) 973
BmsI GCATC 5 cut(s) 355, 356, 382, 555, 1852
BmtI GCTAGC 1 cut(s) 1853
BmuI ACTGGG 1 cut(s) 973
BplI GAGNNNNNCTC 4 cut(s) 129, 161, 221, 253
BpmI CTGGAG 1 cut(s) 1803
Bpu14I TTCGAA 1 cut(s) 1664
BpuEI CTTGAG 1 cut(s) 293
BsaHI GRCGYC 1 cut(s) 718
BsaI GGTCTC 2 cut(s) 771, 1328
BsaJI CCNNGG 1 cut(s) 1338
BsaXI ACNNNNNCTCC 4 cut(s) 768, 798, 1674, 1704
Bsc4I CCNNNNNNNGG 7 cut(s) 458, 697, 794, 865, 1194, 1399, 1489
Bse1I ACTGG 5 cut(s) 233, 968, 999, 1513, 1730
Bse3DI GCAATG 3 cut(s) 52, 1314, 1761
BseDI CCNNGG 1 cut(s) 1338
BseGI GGATG 5 cut(s) 524, 957, 1132, 1451, 1807
BseLI CCNNNNNNNGG 7 cut(s) 458, 697, 794, 865, 1194, 1399, 1489
BseMI GCAATG 3 cut(s) 52, 1314, 1761
BseMII CTCAG 4 cut(s) 276, 870, 1566, 1725
BseNI ACTGG 5 cut(s) 233, 968, 999, 1513, 1730
BsePI GCGCGC 1 cut(s) 407
BseSI GKGCMC 2 cut(s) 25, 1763
BseXI GCAGC 7 cut(s) 511, 1167, 1195, 1217, 1748, 1858, 1865
BseYI CCCAGC 1 cut(s) 244
Bsh1236I CGCG 1 cut(s) 409
BshFI GGCC 2 cut(s) 813, 1525
BshNI GGYRCC 1 cut(s) 717
BsiHKAI GWGCWC 2 cut(s) 318, 1763
BslFI GGGAC 1 cut(s) 916
BslI CCNNNNNNNGG 7 cut(s) 458, 697, 794, 865, 1194, 1399, 1489
BsmAI GTCTC 4 cut(s) 241, 602, 771, 1328
BsmFI GGGAC 1 cut(s) 916
BsmI GAATGC 2 cut(s) 106, 1638
BsnI GGCC 2 cut(s) 813, 1525
Bso31I GGTCTC 2 cut(s) 771, 1328
Bsp119I TTCGAA 1 cut(s) 1664
Bsp1286I GDGCHC 3 cut(s) 25, 318, 1763
Bsp1407I TGTACA 2 cut(s) 1518, 1720
Bsp143I GATC 3 cut(s) 1343, 1479, 1548
Bsp19I CCATGG 1 cut(s) 1338
BspACI CCGC 3 cut(s) 449, 1315, 1589
BspANI GGCC 2 cut(s) 813, 1525
BspCNI CTCAG 4 cut(s) 277, 871, 1565, 1724
BspFNI CGCG 1 cut(s) 409
BspLI GGNNCC 2 cut(s) 430, 719
BspOI GCTAGC 1 cut(s) 1853
BspPI GGATC 2 cut(s) 1351, 1474
BspT104I TTCGAA 1 cut(s) 1664
BspT107I GGYRCC 1 cut(s) 717
BspTNI GGTCTC 2 cut(s) 771, 1328
BsrDI GCAATG 3 cut(s) 52, 1314, 1761
BsrGI TGTACA 2 cut(s) 1518, 1720
BsrI ACTGG 5 cut(s) 233, 968, 999, 1513, 1730
BssECI CCNNGG 1 cut(s) 1338
BssHII GCGCGC 1 cut(s) 407
BssMI GATC 3 cut(s) 1343, 1479, 1548
BssNI GRCGYC 1 cut(s) 718
BssT1I CCWWGG 1 cut(s) 1338
Bst4CI ACNGT 3 cut(s) 572, 584, 657
Bst6I CTCTTC 4 cut(s) 171, 1280, 1622, 1688
BstACI GRCGYC 1 cut(s) 718
BstAUI TGTACA 2 cut(s) 1518, 1720
BstBI TTCGAA 1 cut(s) 1664
BstC8I GCNNGC 5 cut(s) 409, 722, 932, 1020, 1851
BstDEI CTNAG 6 cut(s) 285, 879, 1407, 1552, 1711, 1858
BstDSI CCRYGG 1 cut(s) 1338
BstF5I GGATG 5 cut(s) 524, 957, 1132, 1451, 1807
BstFNI CGCG 1 cut(s) 409
BstH2I RGCGCY 1 cut(s) 721
BstHHI GCGC 4 cut(s) 409, 411, 529, 720
BstKTI GATC 3 cut(s) 1346, 1482, 1551
BstMAI GTCTC 4 cut(s) 241, 602, 771, 1328
BstMBI GATC 3 cut(s) 1343, 1479, 1548
BstMWI GCNNNNNNNGC 3 cut(s) 322, 987, 1862
BstNSI RCATGY 1 cut(s) 934
BstSFI CTRYAG 1 cut(s) 640
BstSLI GKGCMC 2 cut(s) 25, 1763
BstUI CGCG 1 cut(s) 409
BstV1I GCAGC 7 cut(s) 511, 1167, 1195, 1217, 1748, 1858, 1865
BstX2I RGATCY 2 cut(s) 1343, 1548
BstYI RGATCY 2 cut(s) 1343, 1548
BsuRI GGCC 2 cut(s) 813, 1525
BtgI CCRYGG 1 cut(s) 1338
BtrI CACGTC 1 cut(s) 942
BtsCI GGATG 5 cut(s) 524, 957, 1132, 1451, 1807
BtsIMutI CAGTG 5 cut(s) 25, 282, 876, 1006, 1723
Cac8I GCNNGC 5 cut(s) 409, 722, 932, 1020, 1851
CaiI CAGNNNCTG 1 cut(s) 1211
CfoI GCGC 4 cut(s) 409, 411, 529, 720
Cfr13I GGNCC 1 cut(s) 1099
CseI GACGC 1 cut(s) 214
Csp6I GTAC 6 cut(s) 1147, 1362, 1377, 1519, 1592, 1721
CspCI CAANNNNNGTGG 2 cut(s) 1206, 1241
CviQI GTAC 6 cut(s) 1147, 1362, 1377, 1519, 1592, 1721
DdeI CTNAG 6 cut(s) 285, 879, 1407, 1552, 1711, 1858
DinI GGCGCC 1 cut(s) 719
DpnI GATC 3 cut(s) 1345, 1481, 1550
DpnII GATC 3 cut(s) 1343, 1479, 1548
DriI GACNNNNNGTC 1 cut(s) 667
EaeI YGGCCR 1 cut(s) 811
Eam1104I CTCTTC 4 cut(s) 171, 1280, 1622, 1688
Eam1105I GACNNNNNGTC 1 cut(s) 667
EarI CTCTTC 4 cut(s) 171, 1280, 1622, 1688
Ecl136II GAGCTC 1 cut(s) 316
Eco130I CCWWGG 1 cut(s) 1338
Eco147I AGGCCT 1 cut(s) 1525
Eco24I GRGCYC 1 cut(s) 318
Eco31I GGTCTC 2 cut(s) 771, 1328
Eco47I GGWCC 1 cut(s) 1099
Eco53kI GAGCTC 1 cut(s) 316
Eco57I CTGAAG 1 cut(s) 417
EcoICRI GAGCTC 1 cut(s) 316
EcoT14I CCWWGG 1 cut(s) 1338
EcoT22I ATGCAT 1 cut(s) 1867
EcoT38I GRGCYC 1 cut(s) 318
EgeI GGCGCC 1 cut(s) 719
EheI GGCGCC 1 cut(s) 719
ErhI CCWWGG 1 cut(s) 1338
FaqI GGGAC 1 cut(s) 916
FblI GTMKAC 1 cut(s) 1246
Fnu4HI GCNGC 7 cut(s) 525, 1156, 1206, 1209, 1737, 1847, 1854
FokI GGATG 5 cut(s) 531, 964, 1139, 1438, 1814
FriOI GRGCYC 1 cut(s) 318
Fsp4HI GCNGC 7 cut(s) 525, 1156, 1206, 1209, 1737, 1847, 1854
FspBI CTAG 5 cut(s) 135, 536, 1527, 1751, 1850
GlaI GCGC 4 cut(s) 408, 410, 528, 719
GluI GCNGC 7 cut(s) 525, 1156, 1206, 1209, 1737, 1847, 1854
GsaI CCCAGC 1 cut(s) 248
GsuI CTGGAG 1 cut(s) 1803
HaeII RGCGCY 1 cut(s) 721
HaeIII GGCC 2 cut(s) 813, 1525
HgaI GACGC 1 cut(s) 214
HhaI GCGC 4 cut(s) 409, 411, 529, 720
Hin1I GRCGYC 1 cut(s) 718
Hin6I GCGC 4 cut(s) 407, 409, 527, 718
HinP1I GCGC 4 cut(s) 407, 409, 527, 718
HincII GTYRAC 1 cut(s) 12
HindII GTYRAC 1 cut(s) 12
HindIII AAGCTT 1 cut(s) 1443
HinfI GANTC 8 cut(s) 58, 258, 378, 462, 833, 883, 1261, 1535
HphI GGTGA 5 cut(s) 398, 764, 980, 1414, 1702
Hpy166II GTNNAC 5 cut(s) 12, 1247, 1519, 1723, 1761
Hpy188I TCNGA 6 cut(s) 72, 322, 1103, 1383, 1540, 1861
Hpy188III TCNNGA 7 cut(s) 62, 135, 949, 1238, 1472, 1624, 1782
Hpy8I GTNNAC 5 cut(s) 12, 1247, 1519, 1723, 1761
Hpy99I CGWCG 1 cut(s) 230
HpyAV CCTTC 9 cut(s) 25, 151, 168, 289, 496, 708, 1235, 1393, 1481
HpyCH4III ACNGT 3 cut(s) 572, 584, 657
HpyCH4IV ACGT 3 cut(s) 941, 1024, 1647
HpyCH4V TGCA 5 cut(s) 28, 368, 1018, 1761, 1865
HpyF10VI GCNNNNNNNGC 3 cut(s) 322, 987, 1862
HpyF3I CTNAG 6 cut(s) 285, 879, 1407, 1552, 1711, 1858
HpySE526I ACGT 3 cut(s) 941, 1024, 1647
Hsp92I GRCGYC 1 cut(s) 718
HspAI GCGC 4 cut(s) 407, 409, 527, 718
KasI GGCGCC 1 cut(s) 717
Kzo9I GATC 3 cut(s) 1343, 1479, 1548
LmnI GCTCC 2 cut(s) 313, 322
Lsp1109I GCAGC 7 cut(s) 511, 1167, 1195, 1217, 1748, 1858, 1865
LweI GCATC 5 cut(s) 355, 356, 382, 555, 1852
MaeI CTAG 5 cut(s) 135, 536, 1527, 1751, 1850
MaeII ACGT 3 cut(s) 941, 1024, 1647
MaeIII GTNAC 7 cut(s) 680, 874, 937, 1213, 1258, 1402, 1766
MalI GATC 3 cut(s) 1345, 1481, 1550
MboI GATC 3 cut(s) 1343, 1479, 1548
MfeI CAATTG 1 cut(s) 1218
MflI RGATCY 2 cut(s) 1343, 1548
MhlI GDGCHC 3 cut(s) 25, 318, 1763
MlsI TGGCCA 1 cut(s) 813
MluNI TGGCCA 1 cut(s) 813
Mly113I GGCGCC 1 cut(s) 718
MlyI GAGTC 1 cut(s) 1255
MmeI TCCRAC 2 cut(s) 554, 1586
Mox20I TGGCCA 1 cut(s) 813
Mph1103I ATGCAT 1 cut(s) 1867
MroXI GAANNNNTTC 1 cut(s) 887
MscI TGGCCA 1 cut(s) 813
MseI TTAA 4 cut(s) 252, 1500, 1659, 1791
MslI CAYNNNNRTG 1 cut(s) 1610
Msp20I TGGCCA 1 cut(s) 813
MspA1I CMGCKG 2 cut(s) 791, 1208
MunI CAATTG 1 cut(s) 1218
Mva1269I GAATGC 2 cut(s) 106, 1638
MvnI CGCG 1 cut(s) 409
MwoI GCNNNNNNNGC 3 cut(s) 322, 987, 1862
NarI GGCGCC 1 cut(s) 718
NcoI CCATGG 1 cut(s) 1338
NdeII GATC 3 cut(s) 1343, 1479, 1548
NheI GCTAGC 1 cut(s) 1849
NlaIV GGNNCC 2 cut(s) 430, 719
NmuCI GTSAC 4 cut(s) 874, 937, 1258, 1402
NsiI ATGCAT 1 cut(s) 1867
NspI RCATGY 1 cut(s) 934
NspV TTCGAA 1 cut(s) 1664
PaeI GCATGC 1 cut(s) 934
PauI GCGCGC 1 cut(s) 407
PceI AGGCCT 1 cut(s) 1525
PctI GAATGC 2 cut(s) 106, 1638
PdmI GAANNNNTTC 1 cut(s) 887
PfeI GAWTC 7 cut(s) 58, 258, 378, 462, 833, 883, 1535
PflMI CCANNNNNTGG 1 cut(s) 794
PkrI GCNGC 7 cut(s) 526, 1157, 1207, 1210, 1738, 1848, 1855
PleI GAGTC 1 cut(s) 1255
PluTI GGCGCC 1 cut(s) 721
PpsI GAGTC 1 cut(s) 1255
Psp124BI GAGCTC 1 cut(s) 318
PspFI CCCAGC 1 cut(s) 244
PspN4I GGNNCC 2 cut(s) 430, 719
PspPI GGNCC 1 cut(s) 1099
PstNI CAGNNNCTG 1 cut(s) 1211
PsuI RGATCY 2 cut(s) 1343, 1548
PteI GCGCGC 1 cut(s) 407
PvuII CAGCTG 2 cut(s) 791, 1208
RsaI GTAC 6 cut(s) 1148, 1363, 1378, 1520, 1593, 1722
RsaNI GTAC 6 cut(s) 1147, 1362, 1377, 1519, 1592, 1721
RseI CAYNNNNRTG 1 cut(s) 1610
SacI GAGCTC 1 cut(s) 318
SaqAI TTAA 4 cut(s) 252, 1500, 1659, 1791
SatI GCNGC 7 cut(s) 525, 1156, 1206, 1209, 1737, 1847, 1854
Sau3AI GATC 3 cut(s) 1343, 1479, 1548
Sau96I GGNCC 1 cut(s) 1099
SchI GAGTC 1 cut(s) 1255
SduI GDGCHC 3 cut(s) 25, 318, 1763
SfaNI GCATC 5 cut(s) 355, 356, 382, 555, 1852
SfcI CTRYAG 1 cut(s) 640
SfoI GGCGCC 1 cut(s) 719
SfuI TTCGAA 1 cut(s) 1664
SinI GGWCC 1 cut(s) 1099
SmiMI CAYNNNNRTG 1 cut(s) 1610
SmlI CTYRAG 1 cut(s) 308
SmoI CTYRAG 1 cut(s) 308
SphI GCATGC 1 cut(s) 934
SseBI AGGCCT 1 cut(s) 1525
SsiI CCGC 3 cut(s) 449, 1315, 1589
SspDI GGCGCC 1 cut(s) 717
SspMI CTAG 5 cut(s) 135, 536, 1527, 1751, 1850
SstI GAGCTC 1 cut(s) 318
StuI AGGCCT 1 cut(s) 1525
StyI CCWWGG 1 cut(s) 1338
TaaI ACNGT 3 cut(s) 572, 584, 657
TaiI ACGT 3 cut(s) 944, 1027, 1650
TaqI TCGA 3 cut(s) 228, 1601, 1664
TatI WGTACW 4 cut(s) 1146, 1361, 1518, 1720
TfiI GAWTC 7 cut(s) 58, 258, 378, 462, 833, 883, 1535
Tru1I TTAA 4 cut(s) 252, 1500, 1659, 1791
Tru9I TTAA 4 cut(s) 252, 1500, 1659, 1791
TscAI CASTG 5 cut(s) 25, 289, 883, 1006, 1730
TseFI GTSAC 4 cut(s) 874, 937, 1258, 1402
TseI GCWGC 7 cut(s) 524, 1155, 1205, 1208, 1736, 1846, 1853
Tsp45I GTSAC 4 cut(s) 874, 937, 1258, 1402
TspRI CASTG 5 cut(s) 25, 289, 883, 1006, 1730
Van91I CCANNNNNTGG 1 cut(s) 794
VneI GTGCAC 1 cut(s) 1759
VpaK11BI GGWCC 1 cut(s) 1099
XbaI TCTAGA 1 cut(s) 134
XceI RCATGY 1 cut(s) 934
XmiI GTMKAC 1 cut(s) 1246
XmnI GAANNNNTTC 1 cut(s) 887
XspI CTAG 5 cut(s) 135, 536, 1527, 1751, 1850
Zsp2I ATGCAT 1 cut(s) 1867
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.