RLG00000010036

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
61937297 .. 61940401
3105 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010036

Sequence Viewer

Length: 3105 bp
ATGTCTAGTAGTACTGCTAGTAACTTGCATGCAAAAGTGTGGAGCATCGAGTTGATCCTAGATGTTCGAAACAAAAGTCTTAACGTGCAGAAGAGAAAGTGGCTTTCTGCTTTTGTGGCCATCTACTGCTCTAGAGCCTTCCTCAAACCTCCTGTGCCAAAAGAAGACATCAACATCAACACCAAATTACTATCTCGCTCTCCCTCTTACACAACCATTAGTGTTGATGATTCGGTTTCGGTGCCAGACCCTAATGGCTTCAGAATAGACCAAACAAGACTCACTGAGCTTGTGAAGGCAAAAGATCTAAACCAGCTCCAGGAGTTGGGAGGGGTTCAAGGTGTAGCAGAAGCACTCGAAACTGATGTAAAGCATGGAATTCATGGCGAAGATGCTGAAGACATTCTCAAGAGAATTGAAGCGTTTGGTTCCAACACATACAAGAGACCACCAAAGAAAAGCTTCTTCCATTTTGTTTGGGAAGCCTTCAAAGACCTCACAATCTTAATCCTCTTGGGATGTGCTGCGCTTTCTCTTGGTTTTGGAATCAAAGAGCATGGATTAAAAGAAGGTTGGATTGACGGTGGAAGCATATTTCTTGCAATCATTCTAGTTATTTCTGTTTCGGCCATAAGCAACTATAGACAGAGCATACAATTTGACAAATTGTCAAAAGTCAGTAATAATCTCCAGATTGAGGCTGTGAGAAAGGGAAGGCGCCAACAGATTTCGATATTTGATATTGTAGTTGGTGATGTCATTTGTTTGAAGATTGGAGATCAAGTTCCAGCTGATGGATTGCTTCTGGATGGCCATTGTTTATCAGTAGATGAATCAAGCATGACAGGGGAGAGTGACCATGTTGAAATTAGCATTACTCAGAATCCATTCTTATTTTCTGGAACTAAAATTGCTGATGGTTATGGTCGGATGCTGGTCACATCTGTTGGCATGAACACAAATTGGGGTGAAATGATGAGCAAAATCAGCCAGGACACGAGTGAAAAGACGCCTCTACAAGCACGTCTAGACAAGCTAACTTCATCTATAGGTAAAGTTGGTTTGGCAGTTGCTTTCTTAGTTCTTTCAGTCATGTTGGTTCGATACTTCACAGGGAATACCGTGGATGAGAATGGAAGCAAAATGTTCAATGGCAGCAAGACAAAAGTAGATGACATAATAAATGCTATCATTGGAATTGTAGCAGCTGCGGTTACAATTGTTGTAGTAGCAATTCCAGAAGGTCTGCCATTGGCTGTGACTCTCACTCTTGCTTATTCCATGAAGAGAATGATGGCTGATAATGCAATGGTACGGAAGCTGTCTGCTTGTGAGACCATGGGGTCTGCTACAACAATTTGTACAGACAAAACAGGTACTCTGACCATGAACCAGATGAAGGTGACTAAGTTTTGGTTGGGGAAAGAATCTGTGGAAGAAGAAGCTTATTCATCTATTTCTCCTTGTGTTCTCGACTTTATTCAAGAAGGGGTTGCTCTCAATACAACTGGTAGTGTGTACAGGCCTAGCTTGGATTCAAAAATTGAGATCTCTGGCAGTCCAACCGAAAAGGCTATTCTATCATGGGCGGTTCATGATACAAAGATGGATATGGAGAAAGTGGTGAAGAGTTGTAGCATTCTCCATGTTGAGGCTTTCAATTCAAAGAAGAAACGTAGTTGCGTTTTGATTAAGAGGAAGGCGGATAATACAGTCCAAGTACATTTTAAAGGAGCTGCAGAGATGATACTAGCAATGTGTACAAGTTACTATGATGCCTCTGGCATTGTTAAGGATATGGATTACAATGAAAAAATGAACTTTGAGCAGATTATTCAAGGTATGGCAGCCAGCAGCCTCAGATGCATTGCATTCGCACATAAAGAAGTTGCAGCAGAGGAGCAAGTTGAAGGAGACCAGAAAGTTGTGCTAAACGAAGATGGTTTGACCCTATTGGGACTTGTAGGTCTTAAAGATCCATGTCGTCCAGGAGTGAAGAAAGCAGTTGAAGACTGTCAATATGCAGGTGTGAACATCAAAATGATCACTGGCGATAATGTTTTCACTGCAAAAGCCATAGCTACTGAGTGTGGGATACTCAGGCCTGGTCAGGACATGCTCGGAGCAGTCATAGAAGGTGTCGAATTTCGCAACTACACTCCAGAACAGAGAATGGAGAAGGTTGAGGCAATATGTGTAATGGCGAGGTCTTCTCCCTTTGATAAGCTTCTGATGGTACAATGCTTGAAGCAGAAAGGTCATGTAGTTGCAGTGACAGGTGATGGAACCAATGATGCACCAGCATTGAAAGAAGCTGATATAGGCCTTTCTATGGGGATTCAAGGCACAGAAGTTGCTAAAGAGAGCTCGGATATTGTGATCATGGATGATAACTTTGCTTCAGTTGCTACAGTTTTGATGTGGGGAAGATGTGTGTACAATAATATCCAGAAGTTCATCCAATTCCAGCTCACTGTCAATGTTGCAGCTCTTGTGATCAACTTTGTAGCTGCAGTTTCAGCAGGTCAAGTCCCATTAACAGCAGTTCAGTTATTGTGGGTGAACTTGATCATGGACACACTTGGAGCTCTTGCTCTTGCGACAGAAAAGCCCACAAAAGAACTTATGGAGAAGCCACCAGTGGGAAGGACAGCGCCTCTCATCACAAACGTCATGTGGAGGAACCTCTTGCCTCAAGCACTGTACCAGATAACAGTCCTCTTGATCTTGCAATTCAGGGGCAAAGCAATCTTTGGTGTCACTGATAAGGTAAAGGACACATTGATCTTCAACACTTTTGTGCTTTGCCAGGTTTTCAATGAGTTCAATGCGAGGAAGCTAGAGAAGAAGAATGTCTTCAAGGGAATACACACCAACAAGTTATTTATGGGAATCATTGCAGCAACAATTATTCTCCAAGTGGTGATGGTGGAGTTTCTTAAGAAATTTGCAGATACAGAGAGATTGAACTGGGGACAATGGGGTCTATGCGTTGGCATTGCAGTCATCTCTTGGCCAATTGGCTGGGTGTTCAAGTCAATACCTGTTCCAGAGAAATCCTTTCTCAGTTATCTAAAGATGAAGAATTATAAGAGCAACATTTGA

Protein Analysis

1035

Amino Acids

113.55

Weight (kDa)

7.92

Isoelectric Point (pI)

30.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 109 - 178 5.4e-15 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 234 - 328 4.8e-20 P-type ATPase actuator domain
Hydrolase PF00702 452 - 773 8.9e-14 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 492 - 663 6.4e-29 P-type ATPase, cytoplasmic domain N
Cation_ATPase_C PF00689 844 - 1013 3.2e-47 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3090
AarI CACCTGC 1 cut(s) 2015
AasI GACNNNNNNGTC 3 cut(s) 1342, 1965, 2982
Acc36I ACCTGC 2 cut(s) 2015, 2513
AccB1I GGYRCC 2 cut(s) 241, 717
AccB7I CCANNNNNTGG 2 cut(s) 325, 794
AciI CCGC 3 cut(s) 1211, 1589, 1703
AclWI GGATC 2 cut(s) 49, 1970
AcoI YGGCCR 4 cut(s) 117, 627, 811, 3014
AcsI RAATTY 3 cut(s) 378, 2144, 2945
AcuI CTGAAG 3 cut(s) 244, 417, 2385
AcyI GRCGYC 2 cut(s) 718, 1010
AfiI CCNNNNNNNGG 8 cut(s) 319, 325, 697, 794, 1399, 1651, 2332, 2642
AflII CTTAAG 1 cut(s) 2939
AhdI GACNNNNNGTC 1 cut(s) 667
AjiI CACGTC 1 cut(s) 1025
AjnI CCWGG 5 cut(s) 318, 990, 1987, 2104, 2808
AleI CACNNNNGTG 1 cut(s) 2798
AloI GAACNNNNNNTCC 2 cut(s) 768, 800
Alw21I GWGCWC 2 cut(s) 2369, 2590
Alw26I GTCTC 3 cut(s) 439, 1328, 1908
AlwI GGATC 2 cut(s) 49, 1970
AoxI GGCC 7 cut(s) 117, 627, 811, 1523, 2102, 2323, 3014
ApoI RAATTY 3 cut(s) 378, 2144, 2945
ArsI GACNNNNNNTTYG 2 cut(s) 61, 93
Asp700I GAANNNNTTC 4 cut(s) 402, 461, 887, 2855
AspLEI GCGC 3 cut(s) 529, 720, 2656
AsuHPI GGTGA 7 cut(s) 764, 980, 1414, 1636, 2291, 2572, 2935
AsuII TTCGAA 1 cut(s) 67
BalI TGGCCA 3 cut(s) 119, 813, 3016
BanI GGYRCC 2 cut(s) 241, 717
BanII GRGCYC 2 cut(s) 2369, 2590
BauI CACGAG 1 cut(s) 997
BbsI GAAGAC 5 cut(s) 171, 405, 2016, 2202, 2848
Bbv12I GWGCWC 2 cut(s) 2369, 2590
BcgI CGANNNNNNTGC 2 cut(s) 1855, 1889
BciT130I CCWGG 5 cut(s) 320, 992, 1989, 2106, 2810
BciVI GTATCC 1 cut(s) 2088
BclI TGATCA 4 cut(s) 2043, 2379, 2496, 2568
BcoDI GTCTC 3 cut(s) 439, 1328, 1908
BfaI CTAG 9 cut(s) 6, 18, 59, 132, 611, 1028, 1527, 1751, 2840
BfmI CTRYAG 5 cut(s) 640, 1047, 1737, 2409, 2511
BfoI RGCGCY 2 cut(s) 721, 2657
BfrI CTTAAG 1 cut(s) 2939
BfuAI ACCTGC 2 cut(s) 2015, 2513
BfuI GTATCC 1 cut(s) 2088
BglII AGATCT 2 cut(s) 304, 1548
BmcAI AGTACT 1 cut(s) 13
Bme1390I CCNGG 5 cut(s) 320, 992, 1989, 2106, 2810
BmeRI GACNNNNNGTC 1 cut(s) 667
BmgBI CACGTC 1 cut(s) 1025
BmiI GGNNCC 5 cut(s) 243, 430, 719, 2287, 2684
BmrFI CCNGG 5 cut(s) 320, 992, 1989, 2106, 2810
BmrI ACTGGG 1 cut(s) 2980
BmsI GCATC 6 cut(s) 54, 382, 921, 1765, 1853, 2284
BmuI ACTGGG 1 cut(s) 2980
BpiI GAAGAC 5 cut(s) 171, 405, 2016, 2202, 2848
BplI GAGNNNNNCTC 4 cut(s) 126, 158, 2197, 2229
BpmI CTGGAG 3 cut(s) 302, 674, 2145
Bpu14I TTCGAA 1 cut(s) 67
BpuEI CTTGAG 2 cut(s) 392, 2679
BsaHI GRCGYC 2 cut(s) 718, 1010
BsaI GGTCTC 3 cut(s) 439, 1328, 1908
BsaJI CCNNGG 2 cut(s) 1122, 1338
BsaXI ACNNNNNCTCC 2 cut(s) 768, 798
Bsc4I CCNNNNNNNGG 8 cut(s) 319, 325, 697, 794, 1399, 1651, 2332, 2642
Bse1I ACTGG 4 cut(s) 1513, 2053, 2639, 2975
Bse3DI GCAATG 5 cut(s) 1314, 1761, 1866, 2895, 2997
BseBI CCWGG 5 cut(s) 320, 992, 1989, 2106, 2810
BseDI CCNNGG 2 cut(s) 1122, 1338
BseGI GGATG 6 cut(s) 524, 814, 936, 1132, 2392, 2457
BseLI CCNNNNNNNGG 8 cut(s) 319, 325, 697, 794, 1399, 1651, 2332, 2642
BseMI GCAATG 5 cut(s) 1314, 1761, 1866, 2895, 2997
BseMII CTCAG 6 cut(s) 276, 893, 1873, 2076, 2113, 3079
BseNI ACTGG 4 cut(s) 1513, 2053, 2639, 2975
BseRI GAGGAG 1 cut(s) 1913
BseYI CCCAGC 1 cut(s) 3024
BsgI GTGCAG 1 cut(s) 107
BshFI GGCC 7 cut(s) 119, 629, 813, 1525, 2104, 2325, 3016
BshNI GGYRCC 2 cut(s) 241, 717
BsiHKAI GWGCWC 2 cut(s) 2369, 2590
BslFI GGGAC 3 cut(s) 1971, 2516, 2988
BslI CCNNNNNNNGG 8 cut(s) 319, 325, 697, 794, 1399, 1651, 2332, 2642
BsmAI GTCTC 3 cut(s) 439, 1328, 1908
BsmFI GGGAC 3 cut(s) 1971, 2516, 2988
BsmI GAATGC 2 cut(s) 1638, 1871
BsnI GGCC 7 cut(s) 119, 629, 813, 1525, 2104, 2325, 3016
Bso31I GGTCTC 3 cut(s) 439, 1328, 1908
Bsp119I TTCGAA 1 cut(s) 67
Bsp1286I GDGCHC 2 cut(s) 2369, 2590
Bsp1407I TGTACA 4 cut(s) 1361, 1518, 1760, 2436
Bsp19I CCATGG 1 cut(s) 1338
BspACI CCGC 3 cut(s) 1211, 1589, 1703
BspANI GGCC 7 cut(s) 119, 629, 813, 1525, 2104, 2325, 3016
BspCNI CTCAG 6 cut(s) 277, 892, 1872, 2077, 2112, 3078
BspHI TCATGA 1 cut(s) 1594
BspLI GGNNCC 5 cut(s) 243, 430, 719, 2287, 2684
BspMAI CTGCAG 2 cut(s) 1741, 2515
BspMI ACCTGC 2 cut(s) 2015, 2513
BspPI GGATC 2 cut(s) 49, 1970
BspT104I TTCGAA 1 cut(s) 67
BspT107I GGYRCC 2 cut(s) 241, 717
BspTI CTTAAG 1 cut(s) 2939
BspTNI GGTCTC 3 cut(s) 439, 1328, 1908
BsrDI GCAATG 5 cut(s) 1314, 1761, 1866, 2895, 2997
BsrGI TGTACA 4 cut(s) 1361, 1518, 1760, 2436
BsrI ACTGG 4 cut(s) 1513, 2053, 2639, 2975
BssECI CCNNGG 2 cut(s) 1122, 1338
BssNI GRCGYC 2 cut(s) 718, 1010
BssSI CACGAG 1 cut(s) 997
BssT1I CCWWGG 1 cut(s) 1338
Bst2BI CACGAG 1 cut(s) 997
Bst2UI CCWGG 5 cut(s) 320, 992, 1989, 2106, 2810
Bst4CI ACNGT 8 cut(s) 584, 1123, 1714, 2015, 2413, 2476, 2703, 2716
Bst6I CTCTTC 3 cut(s) 86, 1280, 1622
BstACI GRCGYC 2 cut(s) 718, 1010
BstAFI CTTAAG 1 cut(s) 2939
BstAUI TGTACA 4 cut(s) 1361, 1518, 1760, 2436
BstBI TTCGAA 1 cut(s) 67
BstC8I GCNNGC 2 cut(s) 30, 1852
BstDEI CTNAG 8 cut(s) 285, 879, 1078, 1407, 1859, 2085, 2099, 3065
BstDSI CCRYGG 2 cut(s) 1122, 1338
BstF5I GGATG 6 cut(s) 524, 814, 936, 1132, 2392, 2457
BstH2I RGCGCY 2 cut(s) 721, 2657
BstHHI GCGC 3 cut(s) 529, 720, 2656
BstMAI GTCTC 3 cut(s) 439, 1328, 1908
BstMWI GCNNNNNNNGC 6 cut(s) 116, 987, 1304, 1863, 2405, 2519
BstNI CCWGG 5 cut(s) 320, 992, 1989, 2106, 2810
BstNSI RCATGY 2 cut(s) 32, 2119
BstSCI CCNGG 5 cut(s) 318, 990, 1987, 2104, 2808
BstSFI CTRYAG 5 cut(s) 640, 1047, 1737, 2409, 2511
BstV2I GAAGAC 5 cut(s) 171, 405, 2016, 2202, 2848
BstX2I RGATCY 3 cut(s) 304, 1548, 1975
BstXI CCANNNNNNTGG 1 cut(s) 3024
BstYI RGATCY 3 cut(s) 304, 1548, 1975
BsuI GTATCC 1 cut(s) 2088
BsuRI GGCC 7 cut(s) 119, 629, 813, 1525, 2104, 2325, 3016
BtgI CCRYGG 2 cut(s) 1122, 1338
BtrI CACGTC 1 cut(s) 1025
BtsCI GGATG 6 cut(s) 524, 814, 936, 1132, 2392, 2457
BtsI GCAGTG 2 cut(s) 2064, 2277
BtsIMutI CAGTG 8 cut(s) 282, 2046, 2064, 2277, 2472, 2646, 2699, 2760
BveI ACCTGC 2 cut(s) 2015, 2513
Cac8I GCNNGC 2 cut(s) 30, 1852
CciI TCATGA 1 cut(s) 1594
CfoI GCGC 3 cut(s) 529, 720, 2656
CseI GACGC 1 cut(s) 1018
DdeI CTNAG 8 cut(s) 285, 879, 1078, 1407, 1859, 2085, 2099, 3065
DinI GGCGCC 1 cut(s) 719
DraI TTTAAA 1 cut(s) 1729
DrdI GACNNNNNNGTC 3 cut(s) 1342, 1965, 2982
DriI GACNNNNNGTC 1 cut(s) 667
DseDI GACNNNNNNGTC 3 cut(s) 1342, 1965, 2982
EaeI YGGCCR 4 cut(s) 117, 627, 811, 3014
Eam1104I CTCTTC 3 cut(s) 86, 1280, 1622
Eam1105I GACNNNNNGTC 1 cut(s) 667
EarI CTCTTC 3 cut(s) 86, 1280, 1622
EciI GGCGGA 1 cut(s) 1718
Ecl136II GAGCTC 2 cut(s) 2367, 2588
Eco130I CCWWGG 1 cut(s) 1338
Eco147I AGGCCT 3 cut(s) 1525, 2104, 2325
Eco24I GRGCYC 2 cut(s) 2369, 2590
Eco31I GGTCTC 3 cut(s) 439, 1328, 1908
Eco53kI GAGCTC 2 cut(s) 2367, 2588
Eco57I CTGAAG 3 cut(s) 244, 417, 2385
EcoICRI GAGCTC 2 cut(s) 2367, 2588
EcoRI GAATTC 1 cut(s) 378
EcoRII CCWGG 5 cut(s) 318, 990, 1987, 2104, 2808
EcoT14I CCWWGG 1 cut(s) 1338
EcoT22I ATGCAT 1 cut(s) 1868
EcoT38I GRGCYC 2 cut(s) 2369, 2590
EgeI GGCGCC 1 cut(s) 719
EheI GGCGCC 1 cut(s) 719
ErhI CCWWGG 1 cut(s) 1338
FalI AAGNNNNNCTT 4 cut(s) 446, 478, 2840, 2872
FaqI GGGAC 3 cut(s) 1971, 2516, 2988
FbaI TGATCA 4 cut(s) 2043, 2379, 2496, 2568
FokI GGATG 6 cut(s) 531, 821, 943, 1139, 2399, 2444
FriOI GRGCYC 2 cut(s) 2369, 2590
FspBI CTAG 9 cut(s) 6, 18, 59, 132, 611, 1028, 1527, 1751, 2840
GlaI GCGC 3 cut(s) 528, 719, 2655
GsaI CCCAGC 1 cut(s) 3028
GsuI CTGGAG 3 cut(s) 302, 674, 2145
HaeII RGCGCY 2 cut(s) 721, 2657
HaeIII GGCC 7 cut(s) 119, 629, 813, 1525, 2104, 2325, 3016
HgaI GACGC 1 cut(s) 1018
HhaI GCGC 3 cut(s) 529, 720, 2656
Hin1I GRCGYC 2 cut(s) 718, 1010
Hin6I GCGC 3 cut(s) 527, 718, 2654
HinP1I GCGC 3 cut(s) 527, 718, 2654
HindIII AAGCTT 3 cut(s) 460, 1443, 2225
HphI GGTGA 7 cut(s) 764, 980, 1414, 1636, 2291, 2572, 2935
Hpy166II GTNNAC 5 cut(s) 1519, 1761, 2032, 2437, 2563
Hpy188I TCNGA 8 cut(s) 263, 882, 930, 1383, 1862, 2123, 2232, 2371
Hpy8I GTNNAC 5 cut(s) 1519, 1761, 2032, 2437, 2563
HpyCH4III ACNGT 8 cut(s) 584, 1123, 1714, 2015, 2413, 2476, 2703, 2716
HpyCH4IV ACGT 4 cut(s) 84, 1024, 1675, 2670
HpyF10VI GCNNNNNNNGC 6 cut(s) 116, 987, 1304, 1863, 2405, 2519
HpyF3I CTNAG 8 cut(s) 285, 879, 1078, 1407, 1859, 2085, 2099, 3065
HpySE526I ACGT 4 cut(s) 84, 1024, 1675, 2670
Hsp92I GRCGYC 2 cut(s) 718, 1010
HspAI GCGC 3 cut(s) 527, 718, 2654
KasI GGCGCC 1 cut(s) 717
Ksp22I TGATCA 4 cut(s) 2043, 2379, 2496, 2568
LmnI GCTCC 6 cut(s) 42, 321, 1733, 1900, 2123, 2585
LweI GCATC 6 cut(s) 54, 382, 921, 1765, 1853, 2284
MaeI CTAG 9 cut(s) 6, 18, 59, 132, 611, 1028, 1527, 1751, 2840
MaeII ACGT 4 cut(s) 84, 1024, 1675, 2670
MaeIII GTNAC 9 cut(s) 20, 854, 937, 1213, 1258, 1402, 1766, 2272, 2758
MfeI CAATTG 2 cut(s) 1218, 3018
MflI RGATCY 3 cut(s) 304, 1548, 1975
MhlI GDGCHC 2 cut(s) 2369, 2590
MlsI TGGCCA 3 cut(s) 119, 813, 3016
MluNI TGGCCA 3 cut(s) 119, 813, 3016
Mly113I GGCGCC 1 cut(s) 718
MlyI GAGTC 2 cut(s) 273, 1255
MmeI TCCRAC 4 cut(s) 456, 554, 908, 1586
Mox20I TGGCCA 3 cut(s) 119, 813, 3016
Mph1103I ATGCAT 1 cut(s) 1868
MroXI GAANNNNTTC 4 cut(s) 402, 461, 887, 2855
MscI TGGCCA 3 cut(s) 119, 813, 3016
MseI TTAA 9 cut(s) 81, 506, 563, 1692, 1728, 1791, 1971, 2537, 2940
MslI CAYNNNNRTG 2 cut(s) 2039, 2798
Msp20I TGGCCA 3 cut(s) 119, 813, 3016
MspA1I CMGCKG 2 cut(s) 791, 1208
MspCI CTTAAG 1 cut(s) 2939
MspR9I CCNGG 5 cut(s) 320, 992, 1989, 2106, 2810
MunI CAATTG 2 cut(s) 1218, 3018
Mva1269I GAATGC 2 cut(s) 1638, 1871
MvaI CCWGG 5 cut(s) 320, 992, 1989, 2106, 2810
MwoI GCNNNNNNNGC 6 cut(s) 116, 987, 1304, 1863, 2405, 2519
NarI GGCGCC 1 cut(s) 718
NcoI CCATGG 1 cut(s) 1338
NlaIV GGNNCC 5 cut(s) 243, 430, 719, 2287, 2684
NmuCI GTSAC 6 cut(s) 854, 937, 1258, 1402, 2272, 2758
NsiI ATGCAT 1 cut(s) 1868
NspI RCATGY 2 cut(s) 32, 2119
NspV TTCGAA 1 cut(s) 67
OliI CACNNNNGTG 1 cut(s) 2798
PaeI GCATGC 1 cut(s) 32
PagI TCATGA 1 cut(s) 1594
PaqCI CACCTGC 1 cut(s) 2015
PceI AGGCCT 3 cut(s) 1525, 2104, 2325
PctI GAATGC 2 cut(s) 1638, 1871
PdmI GAANNNNTTC 4 cut(s) 402, 461, 887, 2855
PfeI GAWTC 8 cut(s) 230, 546, 833, 883, 1427, 1535, 2338, 2892
PflMI CCANNNNNTGG 2 cut(s) 325, 794
PfoI TCCNGGA 2 cut(s) 318, 1987
PleI GAGTC 2 cut(s) 273, 1255
PluTI GGCGCC 1 cut(s) 721
PpsI GAGTC 2 cut(s) 273, 1255
PsiI TTATAA 1 cut(s) 3090
Psp124BI GAGCTC 2 cut(s) 2369, 2590
Psp6I CCWGG 5 cut(s) 318, 990, 1987, 2104, 2808
PspFI CCCAGC 1 cut(s) 3024
PspGI CCWGG 5 cut(s) 318, 990, 1987, 2104, 2808
PspN4I GGNNCC 5 cut(s) 243, 430, 719, 2287, 2684
PstI CTGCAG 2 cut(s) 1741, 2515
PsuI RGATCY 3 cut(s) 304, 1548, 1975
PvuII CAGCTG 2 cut(s) 791, 1208
RseI CAYNNNNRTG 2 cut(s) 2039, 2798
SacI GAGCTC 2 cut(s) 2369, 2590
SaqAI TTAA 9 cut(s) 81, 506, 563, 1692, 1728, 1791, 1971, 2537, 2940
ScaI AGTACT 1 cut(s) 13
SchI GAGTC 2 cut(s) 273, 1255
ScrFI CCNGG 5 cut(s) 320, 992, 1989, 2106, 2810
SduI GDGCHC 2 cut(s) 2369, 2590
SfaNI GCATC 6 cut(s) 54, 382, 921, 1765, 1853, 2284
SfcI CTRYAG 5 cut(s) 640, 1047, 1737, 2409, 2511
SfoI GGCGCC 1 cut(s) 719
SfuI TTCGAA 1 cut(s) 67
SmiMI CAYNNNNRTG 2 cut(s) 2039, 2798
SmlI CTYRAG 3 cut(s) 407, 2694, 2939
SmoI CTYRAG 3 cut(s) 407, 2694, 2939
SphI GCATGC 1 cut(s) 32
SseBI AGGCCT 3 cut(s) 1525, 2104, 2325
SsiI CCGC 3 cut(s) 1211, 1589, 1703
SspDI GGCGCC 1 cut(s) 717
SspMI CTAG 9 cut(s) 6, 18, 59, 132, 611, 1028, 1527, 1751, 2840
SstI GAGCTC 2 cut(s) 2369, 2590
StuI AGGCCT 3 cut(s) 1525, 2104, 2325
StyD4I CCNGG 5 cut(s) 318, 990, 1987, 2104, 2808
StyI CCWWGG 1 cut(s) 1338
TaaI ACNGT 8 cut(s) 584, 1123, 1714, 2015, 2413, 2476, 2703, 2716
TaiI ACGT 4 cut(s) 87, 1027, 1678, 2673
TaqI TCGA 7 cut(s) 48, 67, 357, 731, 1102, 1473, 2142
TatI WGTACW 6 cut(s) 11, 1361, 1518, 1720, 1760, 2436
TfiI GAWTC 8 cut(s) 230, 546, 833, 883, 1427, 1535, 2338, 2892
Tru1I TTAA 9 cut(s) 81, 506, 563, 1692, 1728, 1791, 1971, 2537, 2940
Tru9I TTAA 9 cut(s) 81, 506, 563, 1692, 1728, 1791, 1971, 2537, 2940
TscAI CASTG 8 cut(s) 289, 2053, 2071, 2277, 2479, 2646, 2706, 2767
TseFI GTSAC 6 cut(s) 854, 937, 1258, 1402, 2272, 2758
Tsp45I GTSAC 6 cut(s) 854, 937, 1258, 1402, 2272, 2758
TspGWI ACGGA 1 cut(s) 1330
TspRI CASTG 8 cut(s) 289, 2053, 2071, 2277, 2479, 2646, 2706, 2767
Van91I CCANNNNNTGG 2 cut(s) 325, 794
Vha464I CTTAAG 1 cut(s) 2939
XapI RAATTY 3 cut(s) 378, 2144, 2945
XbaI TCTAGA 2 cut(s) 131, 1027
XceI RCATGY 2 cut(s) 32, 2119
XmnI GAANNNNTTC 4 cut(s) 402, 461, 887, 2855
XspI CTAG 9 cut(s) 6, 18, 59, 132, 611, 1028, 1527, 1751, 2840
ZrmI AGTACT 1 cut(s) 13
Zsp2I ATGCAT 1 cut(s) 1868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.