Rmu_sc0000753.1_g000013

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000753.1
Physical Location & Seq
Forward (+)
57179 .. 60754
3576 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000753.1_g000013.1.cds

Sequence Viewer

Length: 3159 bp
atgtccaagtctaccaccctgcatgcaaagttggggagcattgagttgctgcttgatgttccgagcacgggtcctggcatcagcaaaagaaaatggcattctgttttcattaccatctacagctctagagccttcctctctttacgaccttctactcttgccaaacataccaactccacattcatatctcgcacgctctcttactccattgttagagtcgagccagtcccggtgccagccattaatggattcaaagcagaccaaaaaagcctcactgagcttgtgaaggagaaaaatttcaaggagctcttggagcttggaggggttgaagaagtagcatcagctctcaaaactgatgcagagcatggaatcaatggtgatgatgctgaagacattgcgtgcagacacgaagcatttggttccaatgttagatcaaaagtggactcatcacaagttatcctagattctacatccaacacatacaagaaaccgccaacgcaaggattcctccattttgtgtgggaagccttcaaagacctcacaattctcattcttataggctgtgctgcgctctctcttggttttggtataaaagagcatggactaaaagaaggttggattgatggtggaagcatttgtctcgcggtcattctggtcatttctgtttcagcaataagcaactacagacagagcagacagtttgacaagctgtcgaaagtcagcaacaatctccagattgaggctgtgagaaatggaaggcgccaagtgatttcaatattcgaaattgtggtgggcgatgtcatctgcttgaaaattggagatcaagttccagctgatggattacttctagaaggccactctttatcagtagacgaatcaagcatgaccggggagagcgaccatgttgagattagggtcactgagaatcctttcttgttctctgggactaaaatagcagatggttatggtcgcatgctcgtcacatcagtcgggatgaacacgaattggggtgaaatgatgagccaaattagccaagataccagtgaaaagacacccctgcaagcacgtctagacaagctaacttcttcgataggtaaagttggtttggcagtcgctttctttgttcttgtagtcatgtttgtcagatacttcacagggaacaccgaggatgagaatggaaacaaagagtacaatggcagcaagaccaaatctgatgacataataaacgctgtcattgggattgtagcagcagcagttacaattgttgtggtagcaattccagaaggtctaccattagctgtgactctcactcttgcatattccatgaagagaatgatggttgataatgcaatggtccggaagctctctgcttgtgagaccatgggatctgctacaacaatttgtaccgccaaaacaggcactctgaccatgaaccagatgaaggtaactaagttttggttggggaaagaatctgtggaagaagaagcttattcatctatttctccatatgttctcaacttgatccaagaaggggtttctctcaacacaactggtagtgtgtacaggcctagcttggattccgaaattgagatctctggcagtcccactgaaaaggctattctttcatgggtagtacacgggttgaagataaatatggaggaagtggtgaagagctgtagcattctccacgtcgaagcctttaattcgaagaagaaacaaagtggagttctggtgaagagaaaggcagacaactcaatccatgtacacaggaaaggagcagcagaaatgttactagcaatgtgtacaagttactataatgcctccggaattgttaaggatatggattacaatgaaaaaatgaacttcgagcagattattcaaggtatggcagccggcagcctcagatgcattgcattcgcacataaagaagttccaacagaggagcaagttgaaggagaccagaaagttgtgctaaaggaagatggattgaccctattgggacttgtgggccttaaagatccatgtcgtccaggtgtgagaaaagcagttgaagattgccaatatgcaggggtgaacgtcaaaatgattaccggagacaatgttttcaccgcaaaagccatagccactgagtgtgggatactcaggcctggtcaggacatgctcgaagcagtgatagaaggtgtcgaatttcgcaactacacgccagaagagagaatggagaaagttgagaaaatttccgtgatggcaaggtcttctccgtttgataagcttctaatggtgcaatgcttgaaacagaaaggtcatgtagttgcagtgactggtgatggcaccaatgatgcaccgacattaaaagaagctgatataggactttctatggggattcaaggaacagaagtggctaaagagagctcagatattgtgatcatggatgataactttgcttcagttgcgacagttttgatgtggggaagatgtgtgtacaataatatccagaagttcatacaattccaactcaccgtcaatgttgcagctcttgtgatcaactttgttgcagcagtttcagcaggtcacgtcccattaacagcagttcagttattgtgggtgaacttgatcatggacacacttggagctcttgctcttgccacagaaaaacccacaagagaactgatggagaagccaccagtgggaaggacagcgcctctcatcacaaacatcatgtggaggaacctcttgcctcaagcactgtaccagataactgtcctcttgatcttacagttcagggggaaagcaatctttggtgtcaatgataaggtaaaggacacattgatcttcaacacttttgtgctttgccaggtgttcaatgagttcaatgcgaggaagctagagaagaagaatgtgttcaagggaatacagaccaataagttcttcatggtgatcattgcagttacaattgttcttcaggtcgtgatggtggaggttctcaagaaatttgcagatacagagaggttgaattggggacaatggggtgtatgcacagggattgcaatcatctcttggccaattggttggctagtcaagtctatacctgttccagagaaacccattttcagctatctgaagatgaagaaaaatacgcaccccagaagaacttcaacatga

Protein Analysis

1052

Amino Acids

115.46

Weight (kDa)

7.77

Isoelectric Point (pI)

30.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2555
AccB1I GGYRCC 3 cut(s) 232, 759, 2327
AccB7I CCANNNNNTGG 1 cut(s) 836
AccI GTMKAC 3 cut(s) 11, 870, 1288
AccII CGCG 1 cut(s) 644
AccIII TCCGGA 2 cut(s) 1356, 1823
AciI CCGC 4 cut(s) 491, 644, 1407, 2109
AclWI GGATC 3 cut(s) 1393, 1516, 2012
AcoI YGGCCR 1 cut(s) 3056
AcsI RAATTY 4 cut(s) 295, 2186, 2232, 2987
AcuI CTGAAG 4 cut(s) 408, 2427, 2942, 3137
AcyI GRCGYC 1 cut(s) 760
AdeI CACNNNGTG 1 cut(s) 2130
AfaI GTAC 8 cut(s) 1190, 1405, 1562, 1635, 1764, 1804, 2480, 2747
AfiI CCNNNNNNNGG 7 cut(s) 68, 500, 739, 836, 1441, 1531, 2684
AhdI GACNNNNNGTC 1 cut(s) 709
AjiI CACGTC 3 cut(s) 1067, 1690, 2572
AjnI CCWGG 4 cut(s) 73, 2029, 2146, 2850
AjuI GAANNNNNNNTTGG 4 cut(s) 164, 196, 2909, 2941
AleI CACNNNNGTG 1 cut(s) 2840
AloI GAACNNNNNNTCC 2 cut(s) 810, 842
Alw21I GWGCWC 4 cut(s) 68, 309, 2411, 2632
Alw26I GTCTC 4 cut(s) 644, 1370, 1950, 2088
AlwI GGATC 3 cut(s) 1393, 1516, 2012
AlwNI CAGNNNCTG 1 cut(s) 2318
Aor13HI TCCGGA 2 cut(s) 1356, 1823
AoxI GGCC 5 cut(s) 853, 1565, 2008, 2144, 3056
ApoI RAATTY 4 cut(s) 295, 2186, 2232, 2987
AseI ATTAAT 1 cut(s) 243
Asp700I GAANNNNTTC 4 cut(s) 296, 929, 2897, 3148
AspLEI GCGC 3 cut(s) 571, 762, 2698
AspS9I GGNCC 3 cut(s) 71, 1354, 2008
AsuC2I CCSGG 2 cut(s) 230, 889
AsuII TTCGAA 2 cut(s) 780, 1706
AvaII GGWCC 2 cut(s) 71, 1354
BalI TGGCCA 1 cut(s) 3058
BanI GGYRCC 3 cut(s) 232, 759, 2327
BanII GRGCYC 3 cut(s) 309, 2411, 2632
BbsI GAAGAC 2 cut(s) 396, 2244
Bbv12I GWGCWC 4 cut(s) 68, 309, 2411, 2632
BcgI CGANNNNNNTGC 4 cut(s) 622, 656, 1897, 1931
BciT130I CCWGG 4 cut(s) 75, 2031, 2148, 2852
BciVI GTATCC 1 cut(s) 2130
BclI TGATCA 4 cut(s) 2421, 2538, 2610, 2934
BcnI CCSGG 2 cut(s) 230, 889
BcoDI GTCTC 4 cut(s) 644, 1370, 1950, 2088
BfaI CTAG 8 cut(s) 126, 461, 848, 1070, 1569, 1793, 2882, 3071
BfmI CTRYAG 3 cut(s) 118, 682, 1675
BfoI RGCGCY 2 cut(s) 763, 2699
BfuAI ACCTGC 1 cut(s) 2555
BfuI GTATCC 1 cut(s) 2130
BglII AGATCT 1 cut(s) 1590
Bme1390I CCNGG 6 cut(s) 75, 230, 889, 2031, 2148, 2852
Bme18I GGWCC 2 cut(s) 71, 1354
BmeRI GACNNNNNGTC 1 cut(s) 709
BmgBI CACGTC 3 cut(s) 1067, 1690, 2572
BmgT120I GGNCC 3 cut(s) 71, 1354, 2008
BmiI GGNNCC 6 cut(s) 72, 234, 421, 761, 2329, 2726
BmrFI CCNGG 6 cut(s) 75, 230, 889, 2031, 2148, 2852
BmsI GCATC 6 cut(s) 87, 346, 347, 373, 1895, 2326
BpiI GAAGAC 2 cut(s) 396, 2244
BplI GAGNNNNNCTC 2 cut(s) 120, 152
BpmI CTGGAG 1 cut(s) 716
Bpu14I TTCGAA 2 cut(s) 780, 1706
BpuEI CTTGAG 2 cut(s) 2721, 2966
BpuMI CCSGG 2 cut(s) 230, 889
BsaBI GATNNNNATC 1 cut(s) 3044
BsaHI GRCGYC 1 cut(s) 760
BsaI GGTCTC 2 cut(s) 1370, 1950
BsaJI CCNNGG 3 cut(s) 888, 1164, 1380
BsaWI WCCGGW 3 cut(s) 1356, 1823, 2090
BsaXI ACNNNNNCTCC 6 cut(s) 810, 840, 1716, 1746, 2085, 2115
Bsc4I CCNNNNNNNGG 7 cut(s) 68, 500, 739, 836, 1441, 1531, 2684
Bse118I RCCGGY 1 cut(s) 1892
Bse1I ACTGG 5 cut(s) 224, 1041, 1555, 2323, 2681
Bse3DI GCAATG 6 cut(s) 393, 1356, 1803, 1908, 2288, 2937
Bse8I GATNNNNATC 1 cut(s) 3044
BseAI TCCGGA 2 cut(s) 1356, 1823
BseBI CCWGG 4 cut(s) 75, 2031, 2148, 2852
BseDI CCNNGG 3 cut(s) 888, 1164, 1380
BseGI GGATG 4 cut(s) 470, 999, 1174, 2434
BseJI GATNNNNATC 1 cut(s) 3044
BseLI CCNNNNNNNGG 7 cut(s) 68, 500, 739, 836, 1441, 1531, 2684
BseMI GCAATG 6 cut(s) 393, 1356, 1803, 1908, 2288, 2937
BseMII CTCAG 6 cut(s) 267, 912, 1915, 2118, 2155, 2424
BseNI ACTGG 5 cut(s) 224, 1041, 1555, 2323, 2681
BseRI GAGGAG 1 cut(s) 1955
BsgI GTGCAG 1 cut(s) 421
Bsh1236I CGCG 1 cut(s) 644
BshFI GGCC 5 cut(s) 855, 1567, 2010, 2146, 3058
BshNI GGYRCC 3 cut(s) 232, 759, 2327
BsiHKAI GWGCWC 4 cut(s) 68, 309, 2411, 2632
BsiSI CCGG 6 cut(s) 230, 888, 1357, 1824, 1893, 2091
BslFI GGGAC 6 cut(s) 212, 958, 1587, 2013, 2558, 3030
BslI CCNNNNNNNGG 7 cut(s) 68, 500, 739, 836, 1441, 1531, 2684
BsmAI GTCTC 4 cut(s) 644, 1370, 1950, 2088
BsmFI GGGAC 6 cut(s) 212, 958, 1587, 2013, 2558, 3030
BsmI GAATGC 3 cut(s) 97, 1680, 1913
BsnI GGCC 5 cut(s) 855, 1567, 2010, 2146, 3058
Bso31I GGTCTC 2 cut(s) 1370, 1950
Bsp119I TTCGAA 2 cut(s) 780, 1706
Bsp1286I GDGCHC 4 cut(s) 68, 309, 2411, 2632
Bsp13I TCCGGA 2 cut(s) 1356, 1823
Bsp1407I TGTACA 4 cut(s) 1560, 1762, 1802, 2478
Bsp19I CCATGG 1 cut(s) 1380
BspACI CCGC 4 cut(s) 491, 644, 1407, 2109
BspANI GGCC 5 cut(s) 855, 1567, 2010, 2146, 3058
BspCNI CTCAG 6 cut(s) 268, 913, 1914, 2119, 2154, 2423
BspEI TCCGGA 2 cut(s) 1356, 1823
BspFNI CGCG 1 cut(s) 644
BspLI GGNNCC 6 cut(s) 72, 234, 421, 761, 2329, 2726
BspMI ACCTGC 1 cut(s) 2555
BspPI GGATC 3 cut(s) 1393, 1516, 2012
BspQI GCTCTTC 1 cut(s) 1664
BspT104I TTCGAA 2 cut(s) 780, 1706
BspT107I GGYRCC 3 cut(s) 232, 759, 2327
BspTNI GGTCTC 2 cut(s) 1370, 1950
BsrDI GCAATG 6 cut(s) 393, 1356, 1803, 1908, 2288, 2937
BsrFI RCCGGY 1 cut(s) 1892
BsrGI TGTACA 4 cut(s) 1560, 1762, 1802, 2478
BsrI ACTGG 5 cut(s) 224, 1041, 1555, 2323, 2681
BssAI RCCGGY 1 cut(s) 1892
BssECI CCNNGG 3 cut(s) 888, 1164, 1380
BssNI GRCGYC 1 cut(s) 760
BssT1I CCWWGG 1 cut(s) 1380
Bst2UI CCWGG 4 cut(s) 75, 2031, 2148, 2852
Bst4CI ACNGT 6 cut(s) 699, 2455, 2518, 2745, 2758, 2775
Bst6I CTCTTC 4 cut(s) 1322, 1664, 1730, 2202
BstACI GRCGYC 1 cut(s) 760
BstAUI TGTACA 4 cut(s) 1560, 1762, 1802, 2478
BstBI TTCGAA 2 cut(s) 780, 1706
BstC8I GCNNGC 7 cut(s) 24, 194, 237, 400, 974, 1062, 1894
BstDEI CTNAG 7 cut(s) 276, 921, 1449, 1901, 2127, 2141, 2410
BstDSI CCRYGG 1 cut(s) 1380
BstF5I GGATG 4 cut(s) 470, 999, 1174, 2434
BstFNI CGCG 1 cut(s) 644
BstH2I RGCGCY 2 cut(s) 763, 2699
BstHHI GCGC 3 cut(s) 571, 762, 2698
BstMAI GTCTC 4 cut(s) 644, 1370, 1950, 2088
BstMWI GCNNNNNNNGC 5 cut(s) 313, 1029, 1905, 2447, 2561
BstNI CCWGG 4 cut(s) 75, 2031, 2148, 2852
BstNSI RCATGY 3 cut(s) 26, 976, 2161
BstSCI CCNGG 6 cut(s) 73, 228, 887, 2029, 2146, 2850
BstSFI CTRYAG 3 cut(s) 118, 682, 1675
BstUI CGCG 1 cut(s) 644
BstV2I GAAGAC 2 cut(s) 396, 2244
BstX2I RGATCY 3 cut(s) 1385, 1590, 2017
BstXI CCANNNNNNTGG 1 cut(s) 3066
BstYI RGATCY 3 cut(s) 1385, 1590, 2017
BsuI GTATCC 1 cut(s) 2130
BsuRI GGCC 5 cut(s) 855, 1567, 2010, 2146, 3058
BtgI CCRYGG 1 cut(s) 1380
BtgZI GCGATG 1 cut(s) 810
BtrI CACGTC 3 cut(s) 1067, 1690, 2572
BtsCI GGATG 4 cut(s) 470, 999, 1174, 2434
BtsI GCAGTG 2 cut(s) 2175, 2319
BtsIMutI CAGTG 9 cut(s) 273, 918, 1048, 1605, 2124, 2175, 2319, 2688, 2741
BveI ACCTGC 1 cut(s) 2555
Cac8I GCNNGC 7 cut(s) 24, 194, 237, 400, 974, 1062, 1894
CaiI CAGNNNCTG 1 cut(s) 2318
CfoI GCGC 3 cut(s) 571, 762, 2698
Cfr10I RCCGGY 1 cut(s) 1892
Cfr13I GGNCC 3 cut(s) 71, 1354, 2008
Csp6I GTAC 8 cut(s) 1189, 1404, 1561, 1634, 1763, 1803, 2479, 2746
CspCI CAANNNNNGTGG 2 cut(s) 1248, 1283
CviQI GTAC 8 cut(s) 1189, 1404, 1561, 1634, 1763, 1803, 2479, 2746
DdeI CTNAG 7 cut(s) 276, 921, 1449, 1901, 2127, 2141, 2410
DinI GGCGCC 1 cut(s) 761
DraIII CACNNNGTG 1 cut(s) 2130
DriI GACNNNNNGTC 1 cut(s) 709
EaeI YGGCCR 1 cut(s) 3056
Eam1104I CTCTTC 4 cut(s) 1322, 1664, 1730, 2202
Eam1105I GACNNNNNGTC 1 cut(s) 709
EarI CTCTTC 4 cut(s) 1322, 1664, 1730, 2202
Ecl136II GAGCTC 3 cut(s) 307, 2409, 2630
Eco130I CCWWGG 1 cut(s) 1380
Eco147I AGGCCT 2 cut(s) 1567, 2146
Eco24I GRGCYC 3 cut(s) 309, 2411, 2632
Eco31I GGTCTC 2 cut(s) 1370, 1950
Eco47I GGWCC 2 cut(s) 71, 1354
Eco53kI GAGCTC 3 cut(s) 307, 2409, 2630
Eco57I CTGAAG 4 cut(s) 408, 2427, 2942, 3137
EcoICRI GAGCTC 3 cut(s) 307, 2409, 2630
EcoO109I RGGNCCY 1 cut(s) 71
EcoRII CCWGG 4 cut(s) 73, 2029, 2146, 2850
EcoT14I CCWWGG 1 cut(s) 1380
EcoT22I ATGCAT 1 cut(s) 1910
EcoT38I GRGCYC 3 cut(s) 309, 2411, 2632
EgeI GGCGCC 1 cut(s) 761
EheI GGCGCC 1 cut(s) 761
ErhI CCWWGG 1 cut(s) 1380
FalI AAGNNNNNCTT 2 cut(s) 293, 325
FaqI GGGAC 6 cut(s) 212, 958, 1587, 2013, 2558, 3030
FauNDI CATATG 1 cut(s) 1507
FbaI TGATCA 4 cut(s) 2421, 2538, 2610, 2934
FblI GTMKAC 3 cut(s) 11, 870, 1288
FokI GGATG 4 cut(s) 457, 1006, 1181, 2441
FriOI GRGCYC 3 cut(s) 309, 2411, 2632
FspBI CTAG 8 cut(s) 126, 461, 848, 1070, 1569, 1793, 2882, 3071
GlaI GCGC 3 cut(s) 570, 761, 2697
GsuI CTGGAG 1 cut(s) 716
HaeII RGCGCY 2 cut(s) 763, 2699
HaeIII GGCC 5 cut(s) 855, 1567, 2010, 2146, 3058
HapII CCGG 6 cut(s) 230, 888, 1357, 1824, 1893, 2091
HhaI GCGC 3 cut(s) 571, 762, 2698
Hin1I GRCGYC 1 cut(s) 760
Hin6I GCGC 3 cut(s) 569, 760, 2696
HinP1I GCGC 3 cut(s) 569, 760, 2696
HindIII AAGCTT 2 cut(s) 1485, 2267
HpaII CCGG 6 cut(s) 230, 888, 1357, 1824, 1893, 2091
Hpy188I TCNGA 8 cut(s) 63, 1145, 1213, 1425, 1582, 1904, 2413, 3117
Hpy99I CGWCG 1 cut(s) 1694
HpyCH4III ACNGT 6 cut(s) 699, 2455, 2518, 2745, 2758, 2775
HpyCH4IV ACGT 4 cut(s) 1066, 1689, 2076, 2571
HpyF10VI GCNNNNNNNGC 5 cut(s) 313, 1029, 1905, 2447, 2561
HpyF3I CTNAG 7 cut(s) 276, 921, 1449, 1901, 2127, 2141, 2410
HpySE526I ACGT 4 cut(s) 1066, 1689, 2076, 2571
Hsp92I GRCGYC 1 cut(s) 760
HspAI GCGC 3 cut(s) 569, 760, 2696
KasI GGCGCC 1 cut(s) 759
Kpn2I TCCGGA 2 cut(s) 1356, 1823
KroI GCCGGC 1 cut(s) 1892
KroNI GCCGGC 1 cut(s) 1894
Ksp22I TGATCA 4 cut(s) 2421, 2538, 2610, 2934
LguI GCTCTTC 1 cut(s) 1664
LmnI GCTCC 6 cut(s) 36, 304, 313, 1775, 1942, 2627
LweI GCATC 6 cut(s) 87, 346, 347, 373, 1895, 2326
MaeI CTAG 8 cut(s) 126, 461, 848, 1070, 1569, 1793, 2882, 3071
MaeII ACGT 4 cut(s) 1066, 1689, 2076, 2571
MfeI CAATTG 3 cut(s) 1260, 2949, 3060
MflI RGATCY 3 cut(s) 1385, 1590, 2017
MhlI GDGCHC 4 cut(s) 68, 309, 2411, 2632
MlsI TGGCCA 1 cut(s) 3058
MluNI TGGCCA 1 cut(s) 3058
Mly113I GGCGCC 1 cut(s) 760
MlyI GAGTC 3 cut(s) 225, 437, 1297
MmeI TCCRAC 4 cut(s) 498, 596, 1958, 2533
Mox20I TGGCCA 1 cut(s) 3058
Mph1103I ATGCAT 1 cut(s) 1910
MroI TCCGGA 2 cut(s) 1356, 1823
MroNI GCCGGC 1 cut(s) 1892
MroXI GAANNNNTTC 4 cut(s) 296, 929, 2897, 3148
MscI TGGCCA 1 cut(s) 3058
MseI TTAA 6 cut(s) 243, 1701, 1833, 2013, 2348, 2579
MslI CAYNNNNRTG 1 cut(s) 2840
Msp20I TGGCCA 1 cut(s) 3058
MspA1I CMGCKG 1 cut(s) 833
MspI CCGG 6 cut(s) 230, 888, 1357, 1824, 1893, 2091
MspR9I CCNGG 6 cut(s) 75, 230, 889, 2031, 2148, 2852
MunI CAATTG 3 cut(s) 1260, 2949, 3060
Mva1269I GAATGC 3 cut(s) 97, 1680, 1913
MvaI CCWGG 4 cut(s) 75, 2031, 2148, 2852
MvnI CGCG 1 cut(s) 644
MwoI GCNNNNNNNGC 5 cut(s) 313, 1029, 1905, 2447, 2561
NaeI GCCGGC 1 cut(s) 1894
NarI GGCGCC 1 cut(s) 760
NciI CCSGG 2 cut(s) 230, 889
NcoI CCATGG 1 cut(s) 1380
NdeI CATATG 1 cut(s) 1507
NgoMIV GCCGGC 1 cut(s) 1892
NlaIV GGNNCC 6 cut(s) 72, 234, 421, 761, 2329, 2726
NmuCI GTSAC 5 cut(s) 916, 979, 1300, 2314, 2567
NsiI ATGCAT 1 cut(s) 1910
NspI RCATGY 3 cut(s) 26, 976, 2161
NspV TTCGAA 2 cut(s) 780, 1706
OliI CACNNNNGTG 1 cut(s) 2840
PaeI GCATGC 2 cut(s) 26, 976
PceI AGGCCT 2 cut(s) 1567, 2146
PciSI GCTCTTC 1 cut(s) 1664
PctI GAATGC 3 cut(s) 97, 1680, 1913
PdiI GCCGGC 1 cut(s) 1894
PdmI GAANNNNTTC 4 cut(s) 296, 929, 2897, 3148
PfeI GAWTC 9 cut(s) 249, 369, 464, 504, 875, 925, 1469, 1577, 2380
PflMI CCANNNNNTGG 1 cut(s) 836
PleI GAGTC 3 cut(s) 224, 437, 1297
PluTI GGCGCC 1 cut(s) 763
PpsI GAGTC 3 cut(s) 224, 437, 1297
PpuMI RGGWCCY 1 cut(s) 71
PshBI ATTAAT 1 cut(s) 243
Psp124BI GAGCTC 3 cut(s) 309, 2411, 2632
Psp5II RGGWCCY 1 cut(s) 71
Psp6I CCWGG 4 cut(s) 73, 2029, 2146, 2850
PspGI CCWGG 4 cut(s) 73, 2029, 2146, 2850
PspN4I GGNNCC 6 cut(s) 72, 234, 421, 761, 2329, 2726
PspPI GGNCC 3 cut(s) 71, 1354, 2008
PspPPI RGGWCCY 1 cut(s) 71
PstNI CAGNNNCTG 1 cut(s) 2318
PsuI RGATCY 3 cut(s) 1385, 1590, 2017
PvuII CAGCTG 1 cut(s) 833
RsaI GTAC 8 cut(s) 1190, 1405, 1562, 1635, 1764, 1804, 2480, 2747
RsaNI GTAC 8 cut(s) 1189, 1404, 1561, 1634, 1763, 1803, 2479, 2746
RseI CAYNNNNRTG 1 cut(s) 2840
SacI GAGCTC 3 cut(s) 309, 2411, 2632
SapI GCTCTTC 1 cut(s) 1664
SaqAI TTAA 6 cut(s) 243, 1701, 1833, 2013, 2348, 2579
Sau96I GGNCC 3 cut(s) 71, 1354, 2008
SchI GAGTC 3 cut(s) 225, 437, 1297
ScrFI CCNGG 6 cut(s) 75, 230, 889, 2031, 2148, 2852
SduI GDGCHC 4 cut(s) 68, 309, 2411, 2632
SfaNI GCATC 6 cut(s) 87, 346, 347, 373, 1895, 2326
SfcI CTRYAG 3 cut(s) 118, 682, 1675
SfoI GGCGCC 1 cut(s) 761
SfuI TTCGAA 2 cut(s) 780, 1706
SinI GGWCC 2 cut(s) 71, 1354
SmiMI CAYNNNNRTG 1 cut(s) 2840
SmlI CTYRAG 2 cut(s) 2736, 2981
SmoI CTYRAG 2 cut(s) 2736, 2981
SphI GCATGC 2 cut(s) 26, 976
SseBI AGGCCT 2 cut(s) 1567, 2146
SsiI CCGC 4 cut(s) 491, 644, 1407, 2109
SspDI GGCGCC 1 cut(s) 759
SspI AATATT 1 cut(s) 777
SspMI CTAG 8 cut(s) 126, 461, 848, 1070, 1569, 1793, 2882, 3071
SstI GAGCTC 3 cut(s) 309, 2411, 2632
StuI AGGCCT 2 cut(s) 1567, 2146
StyD4I CCNGG 6 cut(s) 73, 228, 887, 2029, 2146, 2850
StyI CCWWGG 1 cut(s) 1380
TaaI ACNGT 6 cut(s) 699, 2455, 2518, 2745, 2758, 2775
TaiI ACGT 4 cut(s) 1069, 1692, 2079, 2574
TaqI TCGA 9 cut(s) 219, 713, 780, 1088, 1692, 1706, 1866, 2163, 2184
TatI WGTACW 6 cut(s) 1188, 1560, 1633, 1762, 1802, 2478
TfiI GAWTC 9 cut(s) 249, 369, 464, 504, 875, 925, 1469, 1577, 2380
Tru1I TTAA 6 cut(s) 243, 1701, 1833, 2013, 2348, 2579
Tru9I TTAA 6 cut(s) 243, 1701, 1833, 2013, 2348, 2579
TscAI CASTG 9 cut(s) 280, 925, 1048, 1612, 2131, 2175, 2319, 2688, 2748
TseFI GTSAC 5 cut(s) 916, 979, 1300, 2314, 2567
Tsp45I GTSAC 5 cut(s) 916, 979, 1300, 2314, 2567
TspGWI ACGGA 2 cut(s) 2227, 2247
TspRI CASTG 9 cut(s) 280, 925, 1048, 1612, 2131, 2175, 2319, 2688, 2748
Van91I CCANNNNNTGG 1 cut(s) 836
VpaK11BI GGWCC 2 cut(s) 71, 1354
VspI ATTAAT 1 cut(s) 243
XapI RAATTY 4 cut(s) 295, 2186, 2232, 2987
XbaI TCTAGA 3 cut(s) 125, 847, 1069
XceI RCATGY 3 cut(s) 26, 976, 2161
XmiI GTMKAC 3 cut(s) 11, 870, 1288
XmnI GAANNNNTTC 4 cut(s) 296, 929, 2897, 3148
XspI CTAG 8 cut(s) 126, 461, 848, 1070, 1569, 1793, 2882, 3071
Zsp2I ATGCAT 1 cut(s) 1910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.