RLG00000010055

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
62280546 .. 62283641
3096 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010055

Sequence Viewer

Length: 3096 bp
ATGTCCAAAGCTACCAGCCTGCATGCAAAATTTGGGAGCATTGAGTTGCTACTTGATGTTCCCAGAAGTTGTCTAGGCATAAGCAAAAGAAAATGGCATTCTGCTTTCCTCACCATATACTGCTCTAGAGCCTTCCTGTCTTCACCACCTTCTTCTCAACCCAAAGACACCAAAGCCACATTCTTATCGCGCACAGTCTCATACTCCATTGTTAGTGTTGAATCAGTTTCGGTGCCAGCCATTAATGGCTTCAAAGTTGATCAAAAAAGCCTCACTAAGCTAGTGAAGGAGAAAAATCTCAACCAGCTTCTGGAGCTGGGAGGGGTTGAAGAAGTGGCATCAGCTCTCAAAACTGATGCTGTGCACGGAATTAATCCTGATGATGCTGACGACATTGCCTCCAGGCATGAAGCATATGGTTTCAACACCTACAAGAAACCTCCAACGCAAGGATTCCTCCATTTTGTGTGGGAAGCCTTCAAAGACCTCACAATCCTAATCCTCTTGGGATGTGCTGGGCTTTCTCTTGGTTTCGGCATTAAAGAGCATGGATTGAAAGAAGGTTGGATTGACGGTGGAAGCATTTGTCTCGCGGTCATTCTGGTCATTTCTGTTTCAGCCATAAGCAACTACAGACAGAGCAGACAGTTTGACAAGCTGTCGAAAGTCAGCAACAATCTCCAGATTGAGACTGTGAGAAATGGAAGGCGCCAACTGATTTCAATATTCGAAATTGTGGTGGGTGATGTCATCTGCTTGAAAATTGGAGATCAAGTTCCAGCTGATGGATTACTTCTAGAAGGCCACTCTTTATCAGTAGACGAATCAAGCATGACAGGGGAGAGCGACCATGTTGAGATTAGTGTCACTGAGAATCCTTTCTTGTTCTCTGGGACTAAAATAGCTGATGGTTATGGTCGCATGCTTGTCACATCGGTCGGGATGAACACAAATTGGGGTGAAATGATGAGCCAAATTAGCCAAGACACCGGTGAAAAGACACCCCTGCAAGCACGTCTAGACAAGCTAAGTTCTTCGATAGGTAAAGTTGGTTTGGCAGTTGGTTTCTTTGTTCTTGTAGTCATGTTGGTCAGATACTTCACAGGAAACACCGAGGATGAGAATGGAAACAAAGAGTACAATGGCAGCAAGACCAAATCTGATGACATAATAAATGCTGTCATTGGGATTGTAGCAGCAGCAGTTACAATTGTTGTGGTAGCAATTCCAGAAGGTCTACCATTAGCTGTGACTCTCACTCTTGCATATTCCATGAAGAGAATGATGGTTGATAATGCAATGGTCCGGAAGCTCTCTGCTTGTGAGACCATGGGATCTGCTGCAACAATTTGTACCGACAAAACAGGCACTCTGACCATGAACCAGATGAAGGTAACTAAGTTTTGGTTGGGGAAAGAATCTGTGGAAGAAGAAGCTTATTCATCTATTTCTCCTTACGTTCTCAACTTGATCCAAGAAGGGGTTTCTCTCAACACAACTGGTAGTGTATACAGGCCTAGCTTGGATTCCGAAATTGAGATCTCTGGCAGTCCCACTGAAAAGGCTATTCTTTCATGGGCTGTACATGGGTCGAAGATGGATATGGAGAAAGTGGTGAAGAGTTGTAGCATTCTCTACGTTGAAGCCTTTAATTCGAAGAAGAAACATAGCGGAGTTCTGGTGAAGAGAAAGGCAGATAACTCAATCCATGTACACTGGAAAGGAGCAGCAGAGATGATACTAGCAATGTGCAAAAGCTACTACAACGCCACTGGAGTTGTTAAGGATATGGATGAGAATGAAAAAAGGAACTTTGAGCATATTATTCAAGGTATGGCAGCTAGCAGTCTCAGATGCATAGCATTTGCACACAAACAAGTTCCAGCAGAGGAGCAACTAAATGCAGACCAGAAAGTTTTGCTAAAGGAAGATGGATTGACCCTATTGGGACTTGTGGGCCTTAAAGATCCATGTCGTCCAGGTGTGAGGAAAGCAGTTGAAGATTGCCAATATGCAGGGGTGAACGTCAGAATGATTACTGGAGACAATGTTTTCACCGCAAAAGCTATAGCCACTGAATGTGGGATACTCAGGCCTGGTCAGGACATGCTCGGAGCAGTGATAGAAGGTGTCGAATTTCGCAACTACACGCCAGAAGAGAGAATGGAGAAAGTTGAGAAAATTGCTGTGATGGCAAGGTCTTCTCCGTTTGATAAGCTTCTAATGGTGCAATGCTTGAAACAGAAAGGTCATGTAGTTGCAGTGACCGGTGATGGCACCAATGATGCACCAGCACTGAAAGAAGCTGATATAGGACTTTCTATGGGGATTCAAGGAACAGAAGTGGCTAAAGAGAGCTCAGATATTGTGATCATGGATGATAACTTTGCTTCAGTTGCGATAGTTTTGATGTGGGGAAGATGTGTGTACAATAATATCCAGAAGTTCATCCAATTCCAACTCACCGTCAATGTTGCAGCTCTTGTGATCAACTTTGTTGCGGCAGTTTCAGCAGGTCAAGTCCCATTAATAGCAGTTCAGTTATTGTGGGTCAACTTGATCATGGACACACTTGGAGCTCTTGCTCTTGCCACAGAAAAACCGACAAGAGAACTTATGGGGAAGCCACCAGTGGGAAGGACGGCACCTCTCATCACAAACATCATGTGGAGGAACCTCTTGCCTCAAGCACTGTATCAAATAACAGTCCTATTGATCTTACAATTCAGGGGCAAAGCAATCTTTGGTGTCAGTGATAAGGTAAAGGACACATTGATTTTCAACACTTTTGTGCTTTGCCAGGTGTTCAATGAGTTCAATGCGAGGAAGCTAGAGAAGAAGAATGTGTTCAAGGGAATACATACCAATAAGTTGTTCATGGGGATCATTGCAGTGACAATTGTTCTTCAGGTCGTGATGGTGGAGGTTCTCAAGAAATTTGCAGATACAGAGAGGTTGAATTGGGGACAATGGGGTGTATGCATAGGGATTGCAGTCATCTCTTGGCCAATTGGTTGGCTAGTCAAGTCTATACCTGTTCCACAGAAACCCATTTTCAGCTATCTGAAGATGAAGAATAATAAGCACCCCAGATGA

Protein Analysis

1032

Amino Acids

112.89

Weight (kDa)

8.43

Isoelectric Point (pI)

28.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 106 - 175 7.7e-14 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 231 - 326 1.1e-20 P-type ATPase actuator domain
Cation_ATPase PF13246 489 - 660 5.9e-28 P-type ATPase, cytoplasmic domain N
Hydrolase PF00702 624 - 770 2.3e-12 haloacid dehalogenase-like hydrolase
Cation_ATPase_C PF00689 841 - 1010 1.2e-46 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2504
AccB1I GGYRCC 4 cut(s) 232, 708, 2276, 2644
AccB7I CCANNNNNTGG 2 cut(s) 310, 785
AccI GTMKAC 3 cut(s) 819, 1237, 1509
AccII CGCG 2 cut(s) 190, 593
AccIII TCCGGA 1 cut(s) 1305
AciI CCGC 4 cut(s) 593, 1671, 2058, 2501
AclWI GGATC 4 cut(s) 1342, 1465, 1961, 2891
AcoI YGGCCR 1 cut(s) 3005
AcsI RAATTY 3 cut(s) 29, 2135, 2936
AcuI CTGAAG 3 cut(s) 2376, 2891, 3086
AcyI GRCGYC 1 cut(s) 709
AfaI GTAC 5 cut(s) 1139, 1354, 1584, 1713, 2429
AfiI CCNNNNNNNGG 6 cut(s) 310, 449, 785, 1390, 1480, 2633
AgeI ACCGGT 2 cut(s) 989, 2267
AhdI GACNNNNNGTC 1 cut(s) 658
AjiI CACGTC 1 cut(s) 1016
AjnI CCWGG 4 cut(s) 401, 1978, 2095, 2799
AjuI GAANNNNNNNTTGG 4 cut(s) 164, 196, 2858, 2890
AleI CACNNNNGTG 1 cut(s) 2789
AloI GAACNNNNNNTCC 2 cut(s) 759, 791
Alw21I GWGCWC 3 cut(s) 366, 2360, 2581
Alw26I GTCTC 6 cut(s) 202, 593, 683, 1319, 1853, 2037
Alw44I GTGCAC 1 cut(s) 362
AlwI GGATC 4 cut(s) 1342, 1465, 1961, 2891
AlwNI CAGNNNCTG 1 cut(s) 310
Aor13HI TCCGGA 1 cut(s) 1305
AoxI GGCC 5 cut(s) 802, 1514, 1957, 2093, 3005
ApaLI GTGCAC 1 cut(s) 362
ApeKI GCWGC 7 cut(s) 1146, 1196, 1199, 1340, 1727, 1838, 2477
ApoI RAATTY 3 cut(s) 29, 2135, 2936
AseI ATTAAT 3 cut(s) 243, 372, 2528
AsiGI ACCGGT 2 cut(s) 989, 2267
Asp700I GAANNNNTTC 2 cut(s) 878, 2846
AspLEI GCGC 2 cut(s) 192, 711
AspS9I GGNCC 2 cut(s) 1303, 1957
AsuII TTCGAA 2 cut(s) 729, 1655
AsuNHI GCTAGC 1 cut(s) 1841
AvaII GGWCC 1 cut(s) 1303
BaeGI GKGCMC 1 cut(s) 366
BalI TGGCCA 1 cut(s) 3007
BanI GGYRCC 4 cut(s) 232, 708, 2276, 2644
BanII GRGCYC 2 cut(s) 2360, 2581
BbsI GAAGAC 2 cut(s) 132, 2193
Bbv12I GWGCWC 3 cut(s) 366, 2360, 2581
BbvI GCAGC 7 cut(s) 1158, 1208, 1211, 1327, 1739, 1850, 2489
BccI CCATC 8 cut(s) 779, 902, 1279, 1591, 1925, 2185, 2267, 2911
BceAI ACGGC 1 cut(s) 2658
BcgI CGANNNNNNTGC 2 cut(s) 571, 605
BciT130I CCWGG 4 cut(s) 403, 1980, 2097, 2801
BciVI GTATCC 1 cut(s) 2079
BclI TGATCA 4 cut(s) 259, 2370, 2487, 2559
BcoDI GTCTC 6 cut(s) 202, 593, 683, 1319, 1853, 2037
BfmI CTRYAG 2 cut(s) 631, 2067
BfoI RGCGCY 1 cut(s) 712
BfuAI ACCTGC 1 cut(s) 2504
BfuI GTATCC 1 cut(s) 2079
BglII AGATCT 1 cut(s) 1539
BisI GCNGC 8 cut(s) 1147, 1197, 1200, 1341, 1728, 1839, 2478, 2502
BlsI GCNGC 8 cut(s) 1148, 1198, 1201, 1342, 1729, 1840, 2479, 2503
Bme1390I CCNGG 4 cut(s) 403, 1980, 2097, 2801
Bme18I GGWCC 1 cut(s) 1303
BmeRI GACNNNNNGTC 1 cut(s) 658
BmgBI CACGTC 1 cut(s) 1016
BmgT120I GGNCC 2 cut(s) 1303, 1957
BmiI GGNNCC 5 cut(s) 234, 710, 2278, 2646, 2675
BmrFI CCNGG 4 cut(s) 403, 1980, 2097, 2801
BmsI GCATC 5 cut(s) 346, 347, 373, 1844, 2275
BmtI GCTAGC 1 cut(s) 1845
BpiI GAAGAC 2 cut(s) 132, 2193
BpmI CTGGAG 5 cut(s) 332, 385, 665, 1794, 2061
Bpu14I TTCGAA 2 cut(s) 729, 1655
BpuEI CTTGAG 2 cut(s) 2670, 2915
BsaHI GRCGYC 1 cut(s) 709
BsaI GGTCTC 1 cut(s) 1319
BsaJI CCNNGG 2 cut(s) 1113, 1329
BsaWI WCCGGW 3 cut(s) 989, 1305, 2267
BsaXI ACNNNNNCTCC 8 cut(s) 383, 413, 759, 789, 1665, 1695, 2034, 2064
Bsc4I CCNNNNNNNGG 6 cut(s) 310, 449, 785, 1390, 1480, 2633
Bse118I RCCGGY 2 cut(s) 989, 2267
Bse1I ACTGG 5 cut(s) 1504, 1721, 1777, 2044, 2630
Bse3DI GCAATG 5 cut(s) 393, 1305, 1752, 2237, 2886
BseAI TCCGGA 1 cut(s) 1305
BseBI CCWGG 4 cut(s) 403, 1980, 2097, 2801
BseDI CCNNGG 2 cut(s) 1113, 1329
BseGI GGATG 6 cut(s) 515, 948, 1123, 1798, 2383, 2448
BseLI CCNNNNNNNGG 6 cut(s) 310, 449, 785, 1390, 1480, 2633
BseMI GCAATG 5 cut(s) 393, 1305, 1752, 2237, 2886
BseMII CTCAG 4 cut(s) 861, 1864, 2104, 2373
BseNI ACTGG 5 cut(s) 1504, 1721, 1777, 2044, 2630
BseRI GAGGAG 1 cut(s) 1904
BseSI GKGCMC 1 cut(s) 366
BseXI GCAGC 7 cut(s) 1158, 1208, 1211, 1327, 1739, 1850, 2489
BseYI CCCAGC 2 cut(s) 316, 515
Bsh1236I CGCG 2 cut(s) 190, 593
Bsh1285I CGRYCG 1 cut(s) 939
BshFI GGCC 5 cut(s) 804, 1516, 1959, 2095, 3007
BshNI GGYRCC 4 cut(s) 232, 708, 2276, 2644
BshTI ACCGGT 2 cut(s) 989, 2267
BsiEI CGRYCG 1 cut(s) 939
BsiHKAI GWGCWC 3 cut(s) 366, 2360, 2581
BsiSI CCGG 3 cut(s) 990, 1306, 2268
BslFI GGGAC 5 cut(s) 907, 1536, 1962, 2507, 2979
BslI CCNNNNNNNGG 6 cut(s) 310, 449, 785, 1390, 1480, 2633
BsmAI GTCTC 6 cut(s) 202, 593, 683, 1319, 1853, 2037
BsmFI GGGAC 5 cut(s) 907, 1536, 1962, 2507, 2979
BsmI GAATGC 2 cut(s) 97, 1629
BsnI GGCC 5 cut(s) 804, 1516, 1959, 2095, 3007
Bso31I GGTCTC 1 cut(s) 1319
Bsp119I TTCGAA 2 cut(s) 729, 1655
Bsp1286I GDGCHC 3 cut(s) 366, 2360, 2581
Bsp13I TCCGGA 1 cut(s) 1305
Bsp1407I TGTACA 3 cut(s) 1582, 1711, 2427
Bsp19I CCATGG 1 cut(s) 1329
BspACI CCGC 4 cut(s) 593, 1671, 2058, 2501
BspANI GGCC 5 cut(s) 804, 1516, 1959, 2095, 3007
BspCNI CTCAG 4 cut(s) 862, 1863, 2103, 2372
BspEI TCCGGA 1 cut(s) 1305
BspFNI CGCG 2 cut(s) 190, 593
BspLI GGNNCC 5 cut(s) 234, 710, 2278, 2646, 2675
BspMI ACCTGC 1 cut(s) 2504
BspOI GCTAGC 1 cut(s) 1845
BspPI GGATC 4 cut(s) 1342, 1465, 1961, 2891
BspT104I TTCGAA 2 cut(s) 729, 1655
BspT107I GGYRCC 4 cut(s) 232, 708, 2276, 2644
BspTNI GGTCTC 1 cut(s) 1319
BsrDI GCAATG 5 cut(s) 393, 1305, 1752, 2237, 2886
BsrFI RCCGGY 2 cut(s) 989, 2267
BsrGI TGTACA 3 cut(s) 1582, 1711, 2427
BsrI ACTGG 5 cut(s) 1504, 1721, 1777, 2044, 2630
BssAI RCCGGY 2 cut(s) 989, 2267
BssECI CCNNGG 2 cut(s) 1113, 1329
BssNAI GTATAC 1 cut(s) 1510
BssNI GRCGYC 1 cut(s) 709
BssT1I CCWWGG 1 cut(s) 1329
Bst1107I GTATAC 1 cut(s) 1510
Bst2UI CCWGG 4 cut(s) 403, 1980, 2097, 2801
Bst4CI ACNGT 7 cut(s) 196, 575, 648, 694, 2467, 2694, 2707
Bst6I CTCTTC 4 cut(s) 1271, 1613, 1679, 2151
BstACI GRCGYC 1 cut(s) 709
BstAUI TGTACA 3 cut(s) 1582, 1711, 2427
BstBI TTCGAA 2 cut(s) 729, 1655
BstC8I GCNNGC 6 cut(s) 20, 24, 237, 923, 1011, 1843
BstDEI CTNAG 7 cut(s) 276, 870, 1028, 1398, 1850, 2090, 2359
BstDSI CCRYGG 1 cut(s) 1329
BstF5I GGATG 6 cut(s) 515, 948, 1123, 1798, 2383, 2448
BstFNI CGCG 2 cut(s) 190, 593
BstH2I RGCGCY 1 cut(s) 712
BstHHI GCGC 2 cut(s) 192, 711
BstMAI GTCTC 6 cut(s) 202, 593, 683, 1319, 1853, 2037
BstMCI CGRYCG 1 cut(s) 939
BstMWI GCNNNNNNNGC 5 cut(s) 313, 978, 2192, 2396, 2510
BstNI CCWGG 4 cut(s) 403, 1980, 2097, 2801
BstNSI RCATGY 3 cut(s) 26, 925, 2110
BstSCI CCNGG 4 cut(s) 401, 1978, 2095, 2799
BstSFI CTRYAG 2 cut(s) 631, 2067
BstSLI GKGCMC 1 cut(s) 366
BstUI CGCG 2 cut(s) 190, 593
BstV1I GCAGC 7 cut(s) 1158, 1208, 1211, 1327, 1739, 1850, 2489
BstV2I GAAGAC 2 cut(s) 132, 2193
BstX2I RGATCY 3 cut(s) 1334, 1539, 1966
BstXI CCANNNNNNTGG 1 cut(s) 3015
BstYI RGATCY 3 cut(s) 1334, 1539, 1966
BstZ17I GTATAC 1 cut(s) 1510
BsuI GTATCC 1 cut(s) 2079
BsuRI GGCC 5 cut(s) 804, 1516, 1959, 2095, 3007
BtgI CCRYGG 1 cut(s) 1329
BtrI CACGTC 1 cut(s) 1016
BtsCI GGATG 6 cut(s) 515, 948, 1123, 1798, 2383, 2448
BtsI GCAGTG 3 cut(s) 2124, 2268, 2898
BveI ACCTGC 1 cut(s) 2504
Cac8I GCNNGC 6 cut(s) 20, 24, 237, 923, 1011, 1843
CaiI CAGNNNCTG 1 cut(s) 310
CfoI GCGC 2 cut(s) 192, 711
Cfr10I RCCGGY 2 cut(s) 989, 2267
Cfr13I GGNCC 2 cut(s) 1303, 1957
Csp6I GTAC 5 cut(s) 1138, 1353, 1583, 1712, 2428
CspAI ACCGGT 2 cut(s) 989, 2267
CspCI CAANNNNNGTGG 4 cut(s) 1197, 1232, 1759, 1794
CviQI GTAC 5 cut(s) 1138, 1353, 1583, 1712, 2428
DdeI CTNAG 7 cut(s) 276, 870, 1028, 1398, 1850, 2090, 2359
DinI GGCGCC 1 cut(s) 710
DriI GACNNNNNGTC 1 cut(s) 658
EaeI YGGCCR 1 cut(s) 3005
Eam1104I CTCTTC 4 cut(s) 1271, 1613, 1679, 2151
Eam1105I GACNNNNNGTC 1 cut(s) 658
EarI CTCTTC 4 cut(s) 1271, 1613, 1679, 2151
Ecl136II GAGCTC 2 cut(s) 2358, 2579
Eco130I CCWWGG 1 cut(s) 1329
Eco147I AGGCCT 2 cut(s) 1516, 2095
Eco24I GRGCYC 2 cut(s) 2360, 2581
Eco31I GGTCTC 1 cut(s) 1319
Eco47I GGWCC 1 cut(s) 1303
Eco53kI GAGCTC 2 cut(s) 2358, 2579
Eco57I CTGAAG 3 cut(s) 2376, 2891, 3086
EcoICRI GAGCTC 2 cut(s) 2358, 2579
EcoRII CCWGG 4 cut(s) 401, 1978, 2095, 2799
EcoT14I CCWWGG 1 cut(s) 1329
EcoT22I ATGCAT 2 cut(s) 1859, 2984
EcoT38I GRGCYC 2 cut(s) 2360, 2581
EgeI GGCGCC 1 cut(s) 710
EheI GGCGCC 1 cut(s) 710
ErhI CCWWGG 1 cut(s) 1329
FaqI GGGAC 5 cut(s) 907, 1536, 1962, 2507, 2979
FauNDI CATATG 1 cut(s) 415
FbaI TGATCA 4 cut(s) 259, 2370, 2487, 2559
FblI GTMKAC 3 cut(s) 819, 1237, 1509
Fnu4HI GCNGC 8 cut(s) 1147, 1197, 1200, 1341, 1728, 1839, 2478, 2502
FokI GGATG 6 cut(s) 522, 955, 1130, 1805, 2390, 2435
FriOI GRGCYC 2 cut(s) 2360, 2581
Fsp4HI GCNGC 8 cut(s) 1147, 1197, 1200, 1341, 1728, 1839, 2478, 2502
GlaI GCGC 2 cut(s) 191, 710
GluI GCNGC 8 cut(s) 1147, 1197, 1200, 1341, 1728, 1839, 2478, 2502
GsaI CCCAGC 2 cut(s) 320, 519
GsuI CTGGAG 5 cut(s) 332, 385, 665, 1794, 2061
HaeII RGCGCY 1 cut(s) 712
HaeIII GGCC 5 cut(s) 804, 1516, 1959, 2095, 3007
HapII CCGG 3 cut(s) 990, 1306, 2268
HhaI GCGC 2 cut(s) 192, 711
Hin1I GRCGYC 1 cut(s) 709
Hin6I GCGC 2 cut(s) 190, 709
HinP1I GCGC 2 cut(s) 190, 709
HincII GTYRAC 1 cut(s) 2554
HindII GTYRAC 1 cut(s) 2554
HindIII AAGCTT 2 cut(s) 1434, 2216
HinfI GANTC 8 cut(s) 221, 453, 824, 874, 1252, 1418, 1526, 2329
HpaII CCGG 3 cut(s) 990, 1306, 2268
Hpy166II GTNNAC 8 cut(s) 364, 820, 1238, 1510, 1714, 2023, 2428, 2554
Hpy188I TCNGA 9 cut(s) 1094, 1162, 1374, 1531, 1853, 2030, 2114, 2362, 3066
Hpy8I GTNNAC 8 cut(s) 364, 820, 1238, 1510, 1714, 2023, 2428, 2554
HpyCH4III ACNGT 7 cut(s) 196, 575, 648, 694, 2467, 2694, 2707
HpyCH4IV ACGT 4 cut(s) 1015, 1458, 1638, 2025
HpyF10VI GCNNNNNNNGC 5 cut(s) 313, 978, 2192, 2396, 2510
HpyF3I CTNAG 7 cut(s) 276, 870, 1028, 1398, 1850, 2090, 2359
HpySE526I ACGT 4 cut(s) 1015, 1458, 1638, 2025
Hsp92I GRCGYC 1 cut(s) 709
HspAI GCGC 2 cut(s) 190, 709
KasI GGCGCC 1 cut(s) 708
Kpn2I TCCGGA 1 cut(s) 1305
Ksp22I TGATCA 4 cut(s) 259, 2370, 2487, 2559
LmnI GCTCC 6 cut(s) 36, 313, 1724, 1891, 2114, 2576
Lsp1109I GCAGC 7 cut(s) 1158, 1208, 1211, 1327, 1739, 1850, 2489
LweI GCATC 5 cut(s) 346, 347, 373, 1844, 2275
MaeII ACGT 4 cut(s) 1015, 1458, 1638, 2025
MaeIII GTNAC 7 cut(s) 865, 928, 1204, 1249, 1393, 2263, 2893
MfeI CAATTG 3 cut(s) 1209, 2898, 3009
MflI RGATCY 3 cut(s) 1334, 1539, 1966
MhlI GDGCHC 3 cut(s) 366, 2360, 2581
MlsI TGGCCA 1 cut(s) 3007
MluNI TGGCCA 1 cut(s) 3007
Mly113I GGCGCC 1 cut(s) 709
MlyI GAGTC 1 cut(s) 1246
MmeI TCCRAC 3 cut(s) 467, 545, 2482
Mox20I TGGCCA 1 cut(s) 3007
Mph1103I ATGCAT 2 cut(s) 1859, 2984
MroI TCCGGA 1 cut(s) 1305
MroXI GAANNNNTTC 2 cut(s) 878, 2846
MscI TGGCCA 1 cut(s) 3007
MseI TTAA 7 cut(s) 243, 372, 540, 1650, 1782, 1962, 2528
MslI CAYNNNNRTG 2 cut(s) 2789, 2891
Msp20I TGGCCA 1 cut(s) 3007
MspA1I CMGCKG 1 cut(s) 782
MspI CCGG 3 cut(s) 990, 1306, 2268
MspR9I CCNGG 4 cut(s) 403, 1980, 2097, 2801
MunI CAATTG 3 cut(s) 1209, 2898, 3009
Mva1269I GAATGC 2 cut(s) 97, 1629
MvaI CCWGG 4 cut(s) 403, 1980, 2097, 2801
MvnI CGCG 2 cut(s) 190, 593
MwoI GCNNNNNNNGC 5 cut(s) 313, 978, 2192, 2396, 2510
NarI GGCGCC 1 cut(s) 709
NcoI CCATGG 1 cut(s) 1329
NdeI CATATG 1 cut(s) 415
NheI GCTAGC 1 cut(s) 1841
NlaIV GGNNCC 5 cut(s) 234, 710, 2278, 2646, 2675
NmuCI GTSAC 5 cut(s) 865, 928, 1249, 2263, 2893
NsiI ATGCAT 2 cut(s) 1859, 2984
NspI RCATGY 3 cut(s) 26, 925, 2110
NspV TTCGAA 2 cut(s) 729, 1655
OliI CACNNNNGTG 1 cut(s) 2789
PaeI GCATGC 2 cut(s) 26, 925
PceI AGGCCT 2 cut(s) 1516, 2095
PctI GAATGC 2 cut(s) 97, 1629
PdmI GAANNNNTTC 2 cut(s) 878, 2846
PfeI GAWTC 7 cut(s) 221, 453, 824, 874, 1418, 1526, 2329
PflMI CCANNNNNTGG 2 cut(s) 310, 785
PinAI ACCGGT 2 cut(s) 989, 2267
PkrI GCNGC 8 cut(s) 1148, 1198, 1201, 1342, 1729, 1840, 2479, 2503
PleI GAGTC 1 cut(s) 1246
PluTI GGCGCC 1 cut(s) 712
PpsI GAGTC 1 cut(s) 1246
PshBI ATTAAT 3 cut(s) 243, 372, 2528
Psp124BI GAGCTC 2 cut(s) 2360, 2581
Psp6I CCWGG 4 cut(s) 401, 1978, 2095, 2799
PspFI CCCAGC 2 cut(s) 316, 515
PspGI CCWGG 4 cut(s) 401, 1978, 2095, 2799
PspN4I GGNNCC 5 cut(s) 234, 710, 2278, 2646, 2675
PspPI GGNCC 2 cut(s) 1303, 1957
PstNI CAGNNNCTG 1 cut(s) 310
PsuI RGATCY 3 cut(s) 1334, 1539, 1966
PvuII CAGCTG 1 cut(s) 782
RsaI GTAC 5 cut(s) 1139, 1354, 1584, 1713, 2429
RsaNI GTAC 5 cut(s) 1138, 1353, 1583, 1712, 2428
RseI CAYNNNNRTG 2 cut(s) 2789, 2891
SacI GAGCTC 2 cut(s) 2360, 2581
SaqAI TTAA 7 cut(s) 243, 372, 540, 1650, 1782, 1962, 2528
SatI GCNGC 8 cut(s) 1147, 1197, 1200, 1341, 1728, 1839, 2478, 2502
Sau96I GGNCC 2 cut(s) 1303, 1957
SchI GAGTC 1 cut(s) 1246
ScrFI CCNGG 4 cut(s) 403, 1980, 2097, 2801
SduI GDGCHC 3 cut(s) 366, 2360, 2581
SfaNI GCATC 5 cut(s) 346, 347, 373, 1844, 2275
SfcI CTRYAG 2 cut(s) 631, 2067
SfoI GGCGCC 1 cut(s) 710
SfuI TTCGAA 2 cut(s) 729, 1655
SgrAI CRCCGGYG 1 cut(s) 989
SinI GGWCC 1 cut(s) 1303
SmiMI CAYNNNNRTG 2 cut(s) 2789, 2891
SmlI CTYRAG 2 cut(s) 2685, 2930
SmoI CTYRAG 2 cut(s) 2685, 2930
SphI GCATGC 2 cut(s) 26, 925
SseBI AGGCCT 2 cut(s) 1516, 2095
SsiI CCGC 4 cut(s) 593, 1671, 2058, 2501
SspDI GGCGCC 1 cut(s) 708
SspI AATATT 1 cut(s) 726
SstI GAGCTC 2 cut(s) 2360, 2581
StuI AGGCCT 2 cut(s) 1516, 2095
StyD4I CCNGG 4 cut(s) 401, 1978, 2095, 2799
StyI CCWWGG 1 cut(s) 1329
TaaI ACNGT 7 cut(s) 196, 575, 648, 694, 2467, 2694, 2707
TaiI ACGT 4 cut(s) 1018, 1461, 1641, 2028
TaqI TCGA 6 cut(s) 662, 729, 1037, 1592, 1655, 2133
TaqII GACCGA 1 cut(s) 925
TatI WGTACW 4 cut(s) 1137, 1582, 1711, 2427
TauI GCSGC 1 cut(s) 2504
TfiI GAWTC 7 cut(s) 221, 453, 824, 874, 1418, 1526, 2329
Tru1I TTAA 7 cut(s) 243, 372, 540, 1650, 1782, 1962, 2528
Tru9I TTAA 7 cut(s) 243, 372, 540, 1650, 1782, 1962, 2528
TseFI GTSAC 5 cut(s) 865, 928, 1249, 2263, 2893
TseI GCWGC 7 cut(s) 1146, 1196, 1199, 1340, 1727, 1838, 2477
Tsp45I GTSAC 5 cut(s) 865, 928, 1249, 2263, 2893
TspGWI ACGGA 2 cut(s) 381, 2196
Van91I CCANNNNNTGG 2 cut(s) 310, 785
VneI GTGCAC 1 cut(s) 362
VpaK11BI GGWCC 1 cut(s) 1303
VspI ATTAAT 3 cut(s) 243, 372, 2528
XapI RAATTY 3 cut(s) 29, 2135, 2936
XbaI TCTAGA 3 cut(s) 125, 796, 1018
XceI RCATGY 3 cut(s) 26, 925, 2110
XmiI GTMKAC 3 cut(s) 819, 1237, 1509
XmnI GAANNNNTTC 2 cut(s) 878, 2846
Zsp2I ATGCAT 2 cut(s) 1859, 2984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.