Rw5G024450

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
34735574 .. 34737820
2247 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G024450.1

Sequence Viewer

Length: 2247 bp
ATGACAGGAACTGATAGCCCTGTTGAAATTAGCCACCATCAGAATCCCTTCCTTTTTTCTGGGACAAAAATCACACATGGATATGGTCGAATGCTTGTCACATCCGTTGGGATGAACACAACGTGGGGTGAGAGGATGAGCCAAATGAGGCAAGACTCCACTGAAAAGACACCTCTGCAAGAACGTCTAGAGAAGCTAAATTCGTTAATAGGTAAAGTAGCTTTGCTAGTTGCTTTCCTTGTTCTTGTAGTCTTGTTAGTTCGATACTTCACGGGGAATACCAAGGATAAGAATGGAAACAAGGAGTTCAATGGCAGCAACACAGCAGTAGATGACATAATAAGCGCTGTCATTGGGATTGTAGCGGCTGCGGTTTCCATTGTTGTGGTGGCAATTCCAGAAGGTCTCTCATTATCACTAATTCTTGGTGTTGCCTATTCCAAGAAGATAATGATGGCTGACAAAGCAATGGATCTGAAGCTCTCTGCTTGTGAGACCATGGGATCGGTTACCACAATTTGCACTGACAAAACAGGTACTCTTACAACGAATCAGATGGAGGTGACCCAGTTTTGGTTAGGTAAATATTCTTTAGAAGAAGAAGCTTATTCGTCAGAGATTTCTCCTTCTGTTCTTCATTTGATCCAAGAAGGAGTTGCTCTGAATACAACTGGTAGTGTGCACAAGCAAAGTTTGGATTCAAAAGTAGAAATCTCAGGCAGTCCAACTGAAAAGGCTATTATTTCATGGGGGGTATATAAGTTGCAGATGGATATGGAGGAAGTAATGAAGAGTTGTAGCATTCTCCATGTTGAGGCCTTTGATTCGCAGAATATGAGAAGTGGGGTTTCAATGAAGAGGAACGCAGACAGCACAGTTCATTTACATTGGAAAGGAGCTCCAGAGATGATACTGGAAATGTGTTCAAGTTACTACACTCCCTCTGGACTCGTTAAAGGTATGGATGACAGTGAAAAAAAGAGTTTTGAGGAGATTATTCAAGGTATGCAAGCTAGCAGACTCCGGTGTATTGCGTTTGCACATAAAGAAGTTCCAGCAGATCAAGACCACACAACTAAGGTAAAAGAAGATGGATTGACCTTGCTGGGACTCGTAGGTCTTAAAGATCCATGCCGTCCAGAAGCGAAGAAAGCAGTTGAAGAATGTCAATATGCAGGGGTGAACGTCAAAATGATTACAGGCGACAATATTTTCACTGCTAAAGCCATAGCCACAGAATGTGGGATACTCAAGCCCGGTCATGACATCTTCAGTGGAGCAGTGATAAATGGTGAGGAATTTCGAAGCTACACCGACGAGGAGAGAATGTTGAAGCTAGACAATATCAGTGTAATGGCACGGTCTTCTGCTGATGATAAGCTTCTAATGGTGCGATGCTTGAAGCAGAAAGGTCATGTAGTTGCAGTGACTGGTCATGGCGCTACTGATGCACCAGCACTGGAAGAAGCTGATATAGGACTATCTATGGGAATTCAAGGAACAGAAGTTGCCAAAGAAAGCTCAGATATTATAATCACAGATGATAACTTTGCATCAGTGGTCAGTGTTTTGGCGTGTGGAAGATGTGTTTATCACAACACGCAGAAGCTCGTCCAGTTCCAGCTCACAGCAAATGTTGCTGGTCTTTTGATCAACTCTGCAGCAGCAGCTTCATCAAGGCAAGTCCCATTTTCGATAGTTCGTTCAATTTGGTTGAACATGATTATGGACACACTACTAGCTCTGGCTCTTACCAAGGAGAAACCCACAAAAGAACTCATGGAAAAGCAACCGGTGGGCAGAACTGAGCCCTTCATCACCAATGTCATGTGCAGGAACCTCACGGCTCAAGCTCTGTACCAGACAACCGTCCTCTTGATATTACAGTTCAGGGGAAAAGCAATGTTTGGTGTTAATGATAAGGTAAATGGCACCTTGATCTTTAATACTTATGTGTTTTGCCAGATGTTCAATGAGTTCAATGCAAGGAAGCTTGAGAAGAAGGATATATTTAGGAATATCCACACCGACAAATTGTTCATGGGGATAATTGCAGTGGCAGTTATTCTACAGATTGCGACGGTGGAATTTCTAAGCAAATTTGAAGATATAGAGAGGTTGAACTACAGACTATGGGGAGTAAGTCTTGGAACCGCAGCCATTTCTTGGCCCATCGGTTGGGTTGTTAAGTGTATACCTGTGCCACAGAAACCCATTTTCCACTACCTGAAGATGAAGATGAACTGA

Protein Analysis

748

Amino Acids

82.36

Weight (kDa)

6.49

Isoelectric Point (pI)

34.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase PF00702 171 - 491 7.8e-13 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 213 - 381 3.7e-27 P-type ATPase, cytoplasmic domain N
Cation_ATPase_C PF00689 562 - 731 3.8e-35 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22910
fragaria_vesca FvH4_4g01640 FvH4_4g01670 FvH4_4g01690 FvH4_4g01690 FvH4_4g01692 FvH4_4g06940
malus_domestica MD04G1223800.v1.1 MD12G1240600.v1.1 MD13G1201600.v1.1 MD15G1425600.v1.1 MD15G1425900.v1.1 MD15G1426000.v1.1 MD15G1426200.v1.1 MD15G1429900.v1.1 MD16G1186200.v1.1 MD16G1201500.v1.1 MD16G1201800.v1.1 MD16G1245900.v1.1
prunus_persica Prupe.1G023100_v2.0.a1 Prupe.1G023200_v2.0.a1 Prupe.1G023300_v2.0.a1 Prupe.1G023400_v2.0.a1 Prupe.2G086400_v2.0.a1
pyrus_communis pycom03g20400 pycom04g03220 pycom04g03230 pycom04g19720 pycom13g17500 pycom14g13160 pycom15g37720
rosa_chinensis RchiOBHm_Chr4g0385871 RchiOBHm_Chr4g0388251 RchiOBHm_Chr4g0388261 RchiOBHm_Chr4g0388291 RchiOBHm_Chr4g0388301 RchiOBHm_Chr4g0388321 RchiOBHm_Chr4g0388331 RchiOBHm_Chr4g0388341 RchiOBHm_Chr4g0388491 RchiOBHm_Chr4g0388501 RchiOBHm_Chr4g0388521 RchiOBHm_Chr4g0388541 RchiOBHm_Chr4g0388581 RchiOBHm_Chr4g0388591 RchiOBHm_Chr5g0038901 RchiOBHm_Chr5g0039001 RchiOBHm_Chr6g0264011
rosa_laevigata RLG00000003378 RLG00000003379 RLG00000010036 RLG00000010037 RLG00000010039 RLG00000010041 RLG00000010042 RLG00000010043 RLG00000010049 RLG00000010050 RLG00000010051 RLG00000010052 RLG00000010054 RLG00000010055 RLG00000010062 RLG00000010064 RLG00000010065 RLG00000010066 RLG00000010067 RLG00000010069 RLG00000010070 RLG00000010071 RLG00000014295 RLG00000033880
rosa_multiflora Rmu_co8110336.1_g000001 Rmu_sc0000533.1_g000070 Rmu_sc0000533.1_g000082 Rmu_sc0000753.1_g000013 Rmu_sc0000753.1_g000024 Rmu_sc0000753.1_g000027 Rmu_sc0000753.1_g000029 Rmu_sc0000753.1_g000030 Rmu_sc0000753.1_g000037 Rmu_sc0000753.1_g000048 Rmu_sc0001241.1_g000003 Rmu_sc0001241.1_g000020 Rmu_sc0001241.1_g000034 Rmu_sc0001241.1_g000045 Rmu_sc0001949.1_g000015 Rmu_sc0001949.1_g000020 Rmu_sc0001949.1_g000023 Rmu_sc0001949.1_g000028 Rmu_sc0002357.1_g000005 Rmu_sc0002357.1_g000017 Rmu_sc0002357.1_g000032 Rmu_sc0002357.1_g000035 Rmu_sc0002357.1_g000043 Rmu_sc0002694.1_g000002 Rmu_sc0004459.1_g000018 Rmu_sc0004773.1_g000011 Rmu_sc0006339.1_g000009 Rmu_sc0008728.1_g000008 Rmu_sc0012275.1_g000001
rosa_roxburghii Rroxscaffold_1G00042120 Rroxscaffold_2G00113240 Rroxscaffold_2G00131810 Rroxscaffold_4G00314870 Rroxscaffold_5G00334730 Rroxscaffold_5G00334750 Rroxscaffold_5G00334770 Rroxscaffold_5G00334790 Rroxscaffold_5G00334850 Rroxscaffold_5G00334970 Rroxscaffold_5G00335010 Rroxscaffold_5G00335030 Rroxscaffold_5G00335040
rosa_rugosa Rorug03G0301800 Rorug03G0316600 Rorug03G0316600 Rorug03G0316700 Rorug03G0316700 Rorug03G0316800.1 Rorug03G0317300 Rorug03G0317400 Rorug03G0318000 Rorug03G0318500 Rorug03G0318600 Rorug03G0318700 Rorug03G0319000 Rorug03G0319000 Rorug03G0319100 Rorug05G0175000 Rorug05G0175500
rosa_samantha Rh4CG007500 Rh4CG022300 Rh4CG022400 Rh4CG022600 Rh4CG022700 Rh4CG023500 Rh4CG023700 Rh4CG023900 Rh4CG024000 Rh4CG024600 Rh4CG025200 Rh4CG025300 Rh4CG025700 Rh4CG025800 Rh4CG025900 Rh4CG026000 Rh4CG026100 Rh4CG026200 Rh5BG266500 Rh6AG128500 Rh6DG110800
rosa_wichuraiana Rw0G009370 Rw4G000360 Rw4G001430 Rw4G001440 Rw4G001460 Rw4G001470 Rw4G001490 Rw4G001500 Rw4G001520 Rw4G001620 Rw4G001630 Rw4G001650 Rw4G001670 Rw5G024450 Rw5G024490 Rw6G011090 Rw6G011110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1532
AasI GACNNNNNNGTC 1 cut(s) 1116
AccB1I GGYRCC 1 cut(s) 1931
AccB7I CCANNNNNTGG 2 cut(s) 2166, 2178
AccI GTMKAC 1 cut(s) 2194
AciI CCGC 3 cut(s) 365, 371, 2154
AclWI GGATC 4 cut(s) 480, 511, 637, 1121
AcsI RAATTY 5 cut(s) 199, 1298, 1491, 2087, 2099
AcuI CTGAAG 2 cut(s) 497, 1255
AdeI CACNNNGTG 1 cut(s) 123
AfaI GTAC 2 cut(s) 538, 1859
AfeI AGCGCT 1 cut(s) 346
AfiI CCNNNNNNNGG 4 cut(s) 573, 814, 2166, 2178
AgeI ACCGGT 1 cut(s) 1792
Alw21I GWGCWC 2 cut(s) 684, 901
Alw26I GTCTC 2 cut(s) 410, 488
Alw44I GTGCAC 1 cut(s) 680
AlwI GGATC 4 cut(s) 480, 511, 637, 1121
AlwNI CAGNNNCTG 2 cut(s) 11, 1430
Aor51HI AGCGCT 1 cut(s) 346
AoxI GGCC 2 cut(s) 816, 2168
ApaLI GTGCAC 1 cut(s) 680
ApeKI GCWGC 6 cut(s) 315, 368, 1661, 1664, 1667, 2156
ApoI RAATTY 5 cut(s) 199, 1298, 1491, 2087, 2099
AsiGI ACCGGT 1 cut(s) 1792
Asp700I GAANNNNTTC 1 cut(s) 47
AspLEI GCGC 2 cut(s) 347, 1442
AspS9I GGNCC 1 cut(s) 2169
AsuC2I CCSGG 1 cut(s) 1257
AsuHPI GGTGA 5 cut(s) 140, 574, 1192, 1304, 1810
AsuII TTCGAA 1 cut(s) 1303
AsuNHI GCTAGC 1 cut(s) 1013
BaeGI GKGCMC 1 cut(s) 684
BanI GGYRCC 1 cut(s) 1931
BanII GRGCYC 2 cut(s) 901, 1812
BbsI GAAGAC 1 cut(s) 1356
Bbv12I GWGCWC 2 cut(s) 684, 901
BbvI GCAGC 6 cut(s) 327, 355, 1673, 1676, 1679, 2168
BccI CCATC 6 cut(s) 45, 448, 550, 763, 1085, 2180
BceAI ACGGC 2 cut(s) 1119, 1860
BciVI GTATCC 1 cut(s) 1239
BclI TGATCA 1 cut(s) 1650
BcnI CCSGG 1 cut(s) 1257
BcoDI GTCTC 2 cut(s) 410, 488
BfaI CTAG 5 cut(s) 188, 227, 1014, 1337, 1739
BfmI CTRYAG 3 cut(s) 1659, 2069, 2125
BfoI RGCGCY 2 cut(s) 348, 1443
BfuI GTATCC 1 cut(s) 1239
BisI GCNGC 7 cut(s) 316, 366, 369, 1662, 1665, 1668, 2157
BlsI GCNGC 7 cut(s) 317, 367, 370, 1663, 1666, 1669, 2158
Bme1390I CCNGG 1 cut(s) 1257
BmgT120I GGNCC 1 cut(s) 2169
BmiI GGNNCC 3 cut(s) 1838, 1933, 2152
BmrFI CCNGG 1 cut(s) 1257
BmrI ACTGGG 1 cut(s) 562
BmsI GCATC 3 cut(s) 1385, 1438, 1562
BmtI GCTAGC 1 cut(s) 1017
BmuI ACTGGG 1 cut(s) 562
BoxI GACNNNNGTC 1 cut(s) 1868
BpiI GAAGAC 1 cut(s) 1356
BpmI CTGGAG 1 cut(s) 885
Bpu14I TTCGAA 1 cut(s) 1303
BpuEI CTTGAG 3 cut(s) 1235, 1833, 2015
BpuMI CCSGG 1 cut(s) 1257
BsaI GGTCTC 2 cut(s) 410, 488
BsaJI CCNNGG 3 cut(s) 282, 498, 1755
BsaWI WCCGGW 2 cut(s) 1023, 1792
BsaXI ACNNNNNCTCC 2 cut(s) 1313, 1343
Bsc4I CCNNNNNNNGG 4 cut(s) 573, 814, 2166, 2178
Bse118I RCCGGY 1 cut(s) 1792
Bse1I ACTGG 6 cut(s) 568, 676, 918, 1435, 1464, 1615
Bse3DI GCAATG 2 cut(s) 474, 1908
BseDI CCNNGG 3 cut(s) 282, 498, 1755
BseGI GGATG 4 cut(s) 101, 117, 141, 970
BseLI CCNNNNNNNGG 4 cut(s) 573, 814, 2166, 2178
BseMI GCAATG 2 cut(s) 474, 1908
BseMII CTCAG 3 cut(s) 729, 1536, 1797
BseNI ACTGG 6 cut(s) 568, 676, 918, 1435, 1464, 1615
BseRI GAGGAG 2 cut(s) 1004, 1334
BseSI GKGCMC 1 cut(s) 684
BseXI GCAGC 6 cut(s) 327, 355, 1673, 1676, 1679, 2168
BseYI CCCAGC 1 cut(s) 1105
BsgI GTGCAG 1 cut(s) 1852
BshFI GGCC 2 cut(s) 818, 2170
BshNI GGYRCC 1 cut(s) 1931
BshTI ACCGGT 1 cut(s) 1792
BsiHKAI GWGCWC 2 cut(s) 684, 901
BsiSI CCGG 3 cut(s) 1024, 1257, 1793
BslFI GGGAC 3 cut(s) 76, 1122, 1670
BslI CCNNNNNNNGG 4 cut(s) 573, 814, 2166, 2178
BsmAI GTCTC 2 cut(s) 410, 488
BsmFI GGGAC 3 cut(s) 76, 1122, 1670
BsmI GAATGC 2 cut(s) 96, 801
BsnI GGCC 2 cut(s) 818, 2170
Bso31I GGTCTC 2 cut(s) 410, 488
Bsp119I TTCGAA 1 cut(s) 1303
Bsp1286I GDGCHC 3 cut(s) 684, 901, 1812
Bsp143I GATC 7 cut(s) 472, 503, 642, 1060, 1126, 1650, 1938
Bsp19I CCATGG 1 cut(s) 498
BspACI CCGC 3 cut(s) 365, 371, 2154
BspANI GGCC 2 cut(s) 818, 2170
BspCNI CTCAG 3 cut(s) 728, 1535, 1798
BspHI TCATGA 1 cut(s) 1261
BspLI GGNNCC 3 cut(s) 1838, 1933, 2152
BspMAI CTGCAG 1 cut(s) 1663
BspOI GCTAGC 1 cut(s) 1017
BspPI GGATC 4 cut(s) 480, 511, 637, 1121
BspT104I TTCGAA 1 cut(s) 1303
BspT107I GGYRCC 1 cut(s) 1931
BspTNI GGTCTC 2 cut(s) 410, 488
BsrDI GCAATG 2 cut(s) 474, 1908
BsrFI RCCGGY 1 cut(s) 1792
BsrI ACTGG 6 cut(s) 568, 676, 918, 1435, 1464, 1615
BssAI RCCGGY 1 cut(s) 1792
BssECI CCNNGG 3 cut(s) 282, 498, 1755
BssMI GATC 7 cut(s) 472, 503, 642, 1060, 1126, 1650, 1938
BssNAI GTATAC 1 cut(s) 2195
BssT1I CCWWGG 3 cut(s) 282, 498, 1755
Bst1107I GTATAC 1 cut(s) 2195
Bst4CI ACNGT 6 cut(s) 877, 971, 1362, 1870, 1887, 2083
Bst6I CTCTTC 2 cut(s) 785, 851
BstAPI GCANNNNNTGC 1 cut(s) 1637
BstBI TTCGAA 1 cut(s) 1303
BstC8I GCNNGC 2 cut(s) 1011, 1015
BstDEI CTNAG 5 cut(s) 715, 1077, 1522, 1806, 2093
BstDSI CCRYGG 1 cut(s) 498
BstEII GGTNACC 2 cut(s) 508, 562
BstF5I GGATG 4 cut(s) 101, 117, 141, 970
BstH2I RGCGCY 2 cut(s) 348, 1443
BstHHI GCGC 2 cut(s) 347, 1442
BstKTI GATC 7 cut(s) 475, 506, 645, 1063, 1129, 1653, 1941
BstMAI GTCTC 2 cut(s) 410, 488
BstMBI GATC 7 cut(s) 472, 503, 642, 1060, 1126, 1650, 1938
BstMWI GCNNNNNNNGC 5 cut(s) 464, 1151, 1448, 1637, 1667
BstPAI GACNNNNGTC 1 cut(s) 1868
BstPI GGTNACC 2 cut(s) 508, 562
BstSCI CCNGG 1 cut(s) 1255
BstSFI CTRYAG 3 cut(s) 1659, 2069, 2125
BstSLI GKGCMC 1 cut(s) 684
BstV1I GCAGC 6 cut(s) 327, 355, 1673, 1676, 1679, 2168
BstV2I GAAGAC 1 cut(s) 1356
BstX2I RGATCY 2 cut(s) 472, 1126
BstXI CCANNNNNNTGG 1 cut(s) 385
BstYI RGATCY 2 cut(s) 472, 1126
BstZ17I GTATAC 1 cut(s) 2195
BsuI GTATCC 1 cut(s) 1239
BsuRI GGCC 2 cut(s) 818, 2170
BtgI CCRYGG 1 cut(s) 498
BtgZI GCGATG 1 cut(s) 1408
BtsCI GGATG 4 cut(s) 101, 117, 141, 970
BtsI GCAGTG 4 cut(s) 1215, 1287, 1431, 2061
Cac8I GCNNGC 2 cut(s) 1011, 1015
CaiI CAGNNNCTG 2 cut(s) 11, 1430
CciI TCATGA 1 cut(s) 1261
CfoI GCGC 2 cut(s) 347, 1442
Cfr10I RCCGGY 1 cut(s) 1792
Cfr13I GGNCC 1 cut(s) 2169
Csp6I GTAC 2 cut(s) 537, 1858
CspAI ACCGGT 1 cut(s) 1792
CviQI GTAC 2 cut(s) 537, 1858
DdeI CTNAG 5 cut(s) 715, 1077, 1522, 1806, 2093
DpnI GATC 7 cut(s) 474, 505, 644, 1062, 1128, 1652, 1940
DpnII GATC 7 cut(s) 472, 503, 642, 1060, 1126, 1650, 1938
DraIII CACNNNGTG 1 cut(s) 123
DrdI GACNNNNNNGTC 1 cut(s) 1116
DseDI GACNNNNNNGTC 1 cut(s) 1116
Eam1104I CTCTTC 2 cut(s) 785, 851
EarI CTCTTC 2 cut(s) 785, 851
Ecl136II GAGCTC 1 cut(s) 899
Eco130I CCWWGG 3 cut(s) 282, 498, 1755
Eco147I AGGCCT 1 cut(s) 818
Eco24I GRGCYC 2 cut(s) 901, 1812
Eco31I GGTCTC 2 cut(s) 410, 488
Eco47III AGCGCT 1 cut(s) 346
Eco53kI GAGCTC 1 cut(s) 899
Eco57I CTGAAG 2 cut(s) 497, 1255
Eco91I GGTNACC 2 cut(s) 508, 562
EcoICRI GAGCTC 1 cut(s) 899
EcoO65I GGTNACC 2 cut(s) 508, 562
EcoRI GAATTC 1 cut(s) 1491
EcoT14I CCWWGG 3 cut(s) 282, 498, 1755
EcoT38I GRGCYC 2 cut(s) 901, 1812
ErhI CCWWGG 3 cut(s) 282, 498, 1755
FaqI GGGAC 3 cut(s) 76, 1122, 1670
FbaI TGATCA 1 cut(s) 1650
FblI GTMKAC 1 cut(s) 2194
Fnu4HI GCNGC 7 cut(s) 316, 366, 369, 1662, 1665, 1668, 2157
FokI GGATG 4 cut(s) 88, 124, 148, 977
FriOI GRGCYC 2 cut(s) 901, 1812
Fsp4HI GCNGC 7 cut(s) 316, 366, 369, 1662, 1665, 1668, 2157
FspBI CTAG 5 cut(s) 188, 227, 1014, 1337, 1739
GlaI GCGC 2 cut(s) 346, 1441
GluI GCNGC 7 cut(s) 316, 366, 369, 1662, 1665, 1668, 2157
GsaI CCCAGC 1 cut(s) 1109
GsuI CTGGAG 1 cut(s) 885
HaeII RGCGCY 2 cut(s) 348, 1443
HaeIII GGCC 2 cut(s) 818, 2170
HapII CCGG 3 cut(s) 1024, 1257, 1793
HhaI GCGC 2 cut(s) 347, 1442
Hin6I GCGC 2 cut(s) 345, 1440
HinP1I GCGC 2 cut(s) 345, 1440
HindIII AAGCTT 3 cut(s) 603, 1379, 1991
HinfI GANTC 8 cut(s) 43, 155, 550, 698, 824, 948, 1020, 1110
HpaII CCGG 3 cut(s) 1024, 1257, 1793
HphI GGTGA 5 cut(s) 140, 574, 1192, 1304, 1810
Hpy166II GTNNAC 3 cut(s) 682, 1183, 2195
Hpy188I TCNGA 6 cut(s) 42, 477, 555, 616, 663, 1525
Hpy188III TCNNGA 8 cut(s) 188, 398, 902, 945, 1064, 1139, 1262, 1876
Hpy8I GTNNAC 3 cut(s) 682, 1183, 2195
Hpy99I CGWCG 2 cut(s) 1319, 2083
HpyAV CCTTC 6 cut(s) 58, 395, 636, 644, 1822, 1996
HpyCH4III ACNGT 6 cut(s) 877, 971, 1362, 1870, 1887, 2083
HpyCH4IV ACGT 3 cut(s) 122, 184, 1185
HpyF10VI GCNNNNNNNGC 5 cut(s) 464, 1151, 1448, 1637, 1667
HpyF3I CTNAG 5 cut(s) 715, 1077, 1522, 1806, 2093
HpySE526I ACGT 3 cut(s) 122, 184, 1185
HspAI GCGC 2 cut(s) 345, 1440
Ksp22I TGATCA 1 cut(s) 1650
Kzo9I GATC 7 cut(s) 472, 503, 642, 1060, 1126, 1650, 1938
LmnI GCTCC 3 cut(s) 896, 904, 1277
Lsp1109I GCAGC 6 cut(s) 327, 355, 1673, 1676, 1679, 2168
LweI GCATC 3 cut(s) 1385, 1438, 1562
MaeI CTAG 5 cut(s) 188, 227, 1014, 1337, 1739
MaeII ACGT 3 cut(s) 122, 184, 1185
MaeIII GTNAC 5 cut(s) 97, 508, 562, 929, 1426
MalI GATC 7 cut(s) 474, 505, 644, 1062, 1128, 1652, 1940
MboI GATC 7 cut(s) 472, 503, 642, 1060, 1126, 1650, 1938
MflI RGATCY 2 cut(s) 472, 1126
MhlI GDGCHC 3 cut(s) 684, 901, 1812
MlyI GAGTC 4 cut(s) 149, 942, 1014, 1104
MmeI TCCRAC 1 cut(s) 749
MroXI GAANNNNTTC 1 cut(s) 47
MseI TTAA 6 cut(s) 206, 954, 1122, 1914, 1944, 2187
MslI CAYNNNNRTG 3 cut(s) 81, 383, 1724
MspI CCGG 3 cut(s) 1024, 1257, 1793
MspR9I CCNGG 1 cut(s) 1257
Mva1269I GAATGC 2 cut(s) 96, 801
MwoI GCNNNNNNNGC 5 cut(s) 464, 1151, 1448, 1637, 1667
NciI CCSGG 1 cut(s) 1257
NcoI CCATGG 1 cut(s) 498
NdeII GATC 7 cut(s) 472, 503, 642, 1060, 1126, 1650, 1938
NheI GCTAGC 1 cut(s) 1013
NlaIV GGNNCC 3 cut(s) 1838, 1933, 2152
NmuCI GTSAC 3 cut(s) 97, 562, 1426
NspV TTCGAA 1 cut(s) 1303
PagI TCATGA 1 cut(s) 1261
PceI AGGCCT 1 cut(s) 818
PctI GAATGC 2 cut(s) 96, 801
PdmI GAANNNNTTC 1 cut(s) 47
PfeI GAWTC 4 cut(s) 43, 550, 698, 824
PflMI CCANNNNNTGG 2 cut(s) 2166, 2178
PinAI ACCGGT 1 cut(s) 1792
PkrI GCNGC 7 cut(s) 317, 367, 370, 1663, 1666, 1669, 2158
PleI GAGTC 4 cut(s) 149, 942, 1014, 1104
PpsI GAGTC 4 cut(s) 149, 942, 1014, 1104
PshAI GACNNNNGTC 1 cut(s) 1868
PsiI TTATAA 1 cut(s) 1532
Psp124BI GAGCTC 1 cut(s) 901
PspEI GGTNACC 2 cut(s) 508, 562
PspFI CCCAGC 1 cut(s) 1105
PspN4I GGNNCC 3 cut(s) 1838, 1933, 2152
PspPI GGNCC 1 cut(s) 2169
PstI CTGCAG 1 cut(s) 1663
PstNI CAGNNNCTG 2 cut(s) 11, 1430
PsuI RGATCY 2 cut(s) 472, 1126
RsaI GTAC 2 cut(s) 538, 1859
RsaNI GTAC 2 cut(s) 537, 1858
RseI CAYNNNNRTG 3 cut(s) 81, 383, 1724
SacI GAGCTC 1 cut(s) 901
SaqAI TTAA 6 cut(s) 206, 954, 1122, 1914, 1944, 2187
SatI GCNGC 7 cut(s) 316, 366, 369, 1662, 1665, 1668, 2157
Sau3AI GATC 7 cut(s) 472, 503, 642, 1060, 1126, 1650, 1938
Sau96I GGNCC 1 cut(s) 2169
SchI GAGTC 4 cut(s) 149, 942, 1014, 1104
ScrFI CCNGG 1 cut(s) 1257
SduI GDGCHC 3 cut(s) 684, 901, 1812
SfaNI GCATC 3 cut(s) 1385, 1438, 1562
SfcI CTRYAG 3 cut(s) 1659, 2069, 2125
SfuI TTCGAA 1 cut(s) 1303
SmiMI CAYNNNNRTG 3 cut(s) 81, 383, 1724
SmlI CTYRAG 3 cut(s) 1250, 1848, 1994
SmoI CTYRAG 3 cut(s) 1250, 1848, 1994
SseBI AGGCCT 1 cut(s) 818
SsiI CCGC 3 cut(s) 365, 371, 2154
SspI AATATT 2 cut(s) 587, 1210
SspMI CTAG 5 cut(s) 188, 227, 1014, 1337, 1739
SstI GAGCTC 1 cut(s) 901
StuI AGGCCT 1 cut(s) 818
StyD4I CCNGG 1 cut(s) 1255
StyI CCWWGG 3 cut(s) 282, 498, 1755
TaaI ACNGT 6 cut(s) 877, 971, 1362, 1870, 1887, 2083
TaiI ACGT 3 cut(s) 125, 187, 1188
TaqI TCGA 4 cut(s) 88, 262, 1303, 1694
TauI GCSGC 1 cut(s) 368
TfiI GAWTC 4 cut(s) 43, 550, 698, 824
Tru1I TTAA 6 cut(s) 206, 954, 1122, 1914, 1944, 2187
Tru9I TTAA 6 cut(s) 206, 954, 1122, 1914, 1944, 2187
TseFI GTSAC 3 cut(s) 97, 562, 1426
TseI GCWGC 6 cut(s) 315, 368, 1661, 1664, 1667, 2156
Tsp45I GTSAC 3 cut(s) 97, 562, 1426
TspDTI ATGAA 9 cut(s) 128, 626, 735, 803, 869, 869, 1662, 1804, 2029
TspGWI ACGGA 1 cut(s) 94
Van91I CCANNNNNTGG 2 cut(s) 2166, 2178
VneI GTGCAC 1 cut(s) 680
XapI RAATTY 5 cut(s) 199, 1298, 1491, 2087, 2099
XbaI TCTAGA 1 cut(s) 187
XcmI CCANNNNNNNNNTGG 1 cut(s) 385
XmiI GTMKAC 1 cut(s) 2194
XmnI GAANNNNTTC 1 cut(s) 47
XspI CTAG 5 cut(s) 188, 227, 1014, 1337, 1739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.