FvH4_4g29541

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000164
Physical Location & Seq
Reverse (-)
29640387 .. 29643978
3592 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g29541.t5

Sequence Viewer

Length: 1644 bp
ATGCATTTCCAAAACGAAAAAGAAAAAGAATCTTCTTTTGTCTTTAGAATGGAATCAGATGAGGAAAACAAAGTAACACGATGTTTTTGGGCTGACTCAATCTCAAGACGAGCTTACAGCTTTTATGGGGATGTAGTTATTTTTGATACTACATACAACACAAATCGGTATGGAATGATTTTTGCACCATTCACTGGTGTTAATAATCATGGACAGACTATCATATTTGCTTGTGCATTTTTGAATGACGAGACAGCAGATTCTTTTGTTTGGTTATTCAAAGAATTTCTAAATGCTATGCCTGGAAATGCCTCGGAAAATGCCCCCACAATGATCATTACCGACCAAGATCCTGCTATGACTAAAGCCATTTCAGAAGCACTTCCACAGACATTTCATAGATATTGCAGTTGGCACATTCTCAATAAATTTTCAGAGAAGCTAGATGCGGTTAAATATCGAAATTACTACCAAGACTTTCATAGCTGCATATGGAATTCAAATAGTGGAGATGAGTTTGACTCGAGATGGACTGAAATTGTTGAGAAGAGTGGATTGAGTGATAACAAGTGGTTGGAGTCGATATACGAGATTCGTTCATCATGGATACTAGCACATGTAAATAATCATTGTTTCTCAGCTGGAATGTCAAGTAGTCAAAGAGCAAAGAGTCAGCATTCTTTCTTCAAGAATTATGTTTCTCAGTCGAATTCTTTGGTGGAATTTATGGTTCAGTTTAAGAGGGGACTTCTTCACCAACGCCACTATGAGTTAGAGGAGGATCATATTAATATTGAAGAGAAGGCAAAAACTGTCATGTCCCTTGAAATAGAAGATCATATGGCCAAGGTTTACACACACAAGTTATTTTATGAAGTTCAAGAACAGTTGAAAGAGAGCTTCAAATATAAATTAGAACTTCTAAGAGAAAATGAGACTCCTTGTGTGTGCAAAGCAGTGAGAAAGAACATTGATACTTGCAAGTCTCGTGAACTCACTTATGAAAAAGATTCTGATTTTGTATCATGTAGCTGTAGAAAGTGGGAGAGTGAAGGGCTTCCATGTCGACATGTTTTGTCATATTTGATTAAGATTCAAGATGTTGATAAATTGCCTATTCAGTACATCTTGAAGAGATGGACTAAGAAAGCAAGGCAGAGTCTTGTGTTAGATTCTGATGGAGGAGAGATAACAGATACCGAAACTTTACTTGCAAGGAGGACTAAATTGTTCCAGCATGCTACAGATGCAATTGATAAGGCAATCGTTAGTGATGAGGCTAGCCAACTCCTAATGGATTCGTTGGATGCTTTCTTGGAGAATTTTAAATCACTAAATATTGGTAATGAAAGTGGACAGAGCACAGTAGTTTTAGAGACCGAGACTGTTACTATTCAGCATGTTTTTAATGAACCAGATCAAGTTAGAGAAAAAGGGTGTGGGAGAAGGTTGAAGAAAGGAAGAGAGAAGAGGAAAGTTAAGGCAAAGGATAGTCAAGGTAAAAAATGCCATGGATGCGGACTATATGGTCAGTCACATGACAAAAGAAATTGTCCAACACTTCTAGGAAAACCTGCTATTAGTAAAGATTGGGATTTAAGTTCAAGTAGCATTGATGAGGATAGTTGTTCATTTACAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

548

Amino Acids

63.29

Weight (kDa)

6.1

Isoelectric Point (pI)

53.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ZSWIM1-3_RNaseH-like PF21056 9 - 131 5.5e-11 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 45 - 142 4.8e-29 MULE transposase domain
SWIM PF04434 339 - 359 2.9e-06 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000164)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02320 FvH4_1g21472 FvH4_2g00813 FvH4_2g02512 FvH4_2g03921 FvH4_2g23460 FvH4_3g29141 FvH4_4g05791 FvH4_4g06321 FvH4_4g15595 FvH4_4g18162 FvH4_4g18163 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_5g31093 FvH4_6g01982 FvH4_6g21931 FvH4_6g44691 FvH4_6g48541
prunus_persica Prupe.1G074100_v2.0.a1 Prupe.3G021400_v2.0.a1
pyrus_communis pycom02g18570 pycom14g00670
rosa_chinensis RchiOBHm_Chr1g0379201 RchiOBHm_Chr1g0379361 RchiOBHm_Chr4g0405981 RchiOBHm_Chr5g0073641 RchiOBHm_Chr5g0073651 RchiOBHm_Chr7g0236661
rosa_multiflora Rmu_co8179562.1_g000001 Rmu_co8343647.1_g000001 Rmu_sc0000041.1_g000017 Rmu_sc0000114.1_g000020 Rmu_sc0000286.1_g000006 Rmu_sc0000308.1_g000038 Rmu_sc0000365.1_g000061 Rmu_sc0000365.1_g000062 Rmu_sc0000538.1_g000060 Rmu_sc0000538.1_g000061 Rmu_sc0000586.1_g000016 Rmu_sc0000898.1_g000007 Rmu_sc0000913.1_g000003 Rmu_sc0000913.1_g000004 Rmu_sc0000996.1_g000006 Rmu_sc0000996.1_g000007 Rmu_sc0000998.1_g000003 Rmu_sc0001350.1_g000009 Rmu_sc0002079.1_g000009 Rmu_sc0002200.1_g000013 Rmu_sc0002226.1_g000025 Rmu_sc0002279.1_g000014 Rmu_sc0002478.1_g000014 Rmu_sc0002717.1_g000004 Rmu_sc0002868.1_g000027 Rmu_sc0002889.1_g000043 Rmu_sc0003023.1_g000001 Rmu_sc0003110.1_g000006 Rmu_sc0003226.1_g000028 Rmu_sc0003226.1_g000029 Rmu_sc0003337.1_g000053 Rmu_sc0003558.1_g000007 Rmu_sc0004345.1_g000014 Rmu_sc0004383.1_g000007 Rmu_sc0004888.1_g000021 Rmu_sc0005114.1_g000012 Rmu_sc0005223.1_g000019 Rmu_sc0005223.1_g000020 Rmu_sc0005639.1_g000025 Rmu_sc0005685.1_g000027 Rmu_sc0005992.1_g000002 Rmu_sc0006326.1_g000034 Rmu_sc0006326.1_g000035 Rmu_sc0007390.1_g000012 Rmu_sc0007451.1_g000006 Rmu_sc0007825.1_g000003 Rmu_sc0008600.1_g000023 Rmu_sc0009291.1_g000003 Rmu_sc0012046.1_g000001 Rmu_sc0012046.1_g000002 Rmu_sc0012710.1_g000001 Rmu_sc0015238.1_g000001 Rmu_sc0016125.1_g000003 Rmu_sc0016175.1_g000001 Rmu_sc0016898.1_g000001 Rmu_sc0017323.1_g000010 Rmu_sc0017874.1_g000002 Rmu_sc0019167.1_g000001 Rmu_sc0020815.1_g000006 Rmu_sc0025564.1_g000001 Rmu_sc0026418.1_g000001 Rmu_sc0035188.1_g000002 Rmu_sc0039254.1_g000001 Rmu_ssc0000120.1_g000015 Rmu_ssc0000120.1_g000016 Rmu_ssc0000330.1_g000023 Rmu_ssc0000433.1_g000004
rosa_roxburghii Rroxscaffold_1G00047130 Rroxscaffold_1G00051320 Rroxscaffold_1G00056600 Rroxscaffold_2G00109650 Rroxscaffold_2G00119980 Rroxscaffold_3G00222550 Rroxscaffold_3G00224980 Rroxscaffold_3G00251020 Rroxscaffold_6G00411190 Rroxscaffold_7G00166520 Rroxscaffold_7G00172920 Rroxscaffold_7G00191860 Rroxscaffold_7G00194430
rosa_rugosa Rorug01G0198900 Rorug01G0217300 Rorug01G0244500 Rorug02G0147400 Rorug02G0152200 Rorug02G0595500 Rorug02G0595600 Rorug03G0060500 Rorug03G0203000 Rorug03G0285800 Rorug04G0027200 Rorug04G0027300 Rorug04G0225800 Rorug05G0073400 Rorug05G0213300 Rorug05G0324600 Rorug05G0390900 Rorug05G0391000 Rorug05G0391100 Rorug05G0391200 Rorug05G0462900 Rorug05G0473000 Rorug06G0256500 Rorug07G0199000 Rorug07G0208800 Rorug07G0208800 Rorug07G0316600 Rorug07G0316700
rosa_samantha Rh2BG532400 Rh2CG581900 Rh3CG322600 Rh6AG079900 Rh6AG250800 Rh6AG496300 Rh6BG506100 Rh6CG126000 Rh6CG511700 Rh6DG109400 Rh6DG112700 Rh7CG104500 Rh7CG322000 Rh7CG431500
rosa_wichuraiana Rw0G020410 Rw1G009190 Rw1G014580 Rw1G021000 Rw1G022190 Rw2G025900 Rw2G029920 Rw2G037530 Rw3G018560 Rw3G020560 Rw4G008500 Rw4G022520 Rw5G019030 Rw5G031180 Rw5G044830 Rw6G005010 Rw6G006890 Rw6G011330 Rw6G011380 Rw6G023900 Rw7G028490 Rw7G030170 Rw7G030370 Rw7G032030 Rw7G032040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1527
Acc36I ACCTGC 1 cut(s) 1582
AccB7I CCANNNNNTGG 1 cut(s) 194
AccI GTMKAC 1 cut(s) 1066
AciI CCGC 2 cut(s) 449, 1518
AclWI GGATC 2 cut(s) 344, 789
AcoI YGGCCR 1 cut(s) 843
AcsI RAATTY 6 cut(s) 284, 428, 496, 709, 722, 1321
AfaI GTAC 1 cut(s) 1124
AfiI CCNNNNNNNGG 1 cut(s) 194
AflIII ACRYGT 2 cut(s) 616, 1069
AjnI CCWGG 1 cut(s) 301
AluBI AGCT 7 cut(s) 113, 120, 442, 486, 641, 900, 1032
AluI AGCT 7 cut(s) 113, 120, 442, 486, 641, 900, 1032
Alw21I GWGCWC 1 cut(s) 1364
Alw26I GTCTC 5 cut(s) 245, 929, 990, 1370, 1376
AlwI GGATC 2 cut(s) 344, 789
Ama87I CYCGRG 1 cut(s) 523
AoxI GGCC 1 cut(s) 843
ApeKI GCWGC 1 cut(s) 486
ApoI RAATTY 6 cut(s) 284, 428, 496, 709, 722, 1321
AseI ATTAAT 1 cut(s) 789
Asp700I GAANNNNTTC 2 cut(s) 381, 1056
AsuHPI GGTGA 1 cut(s) 746
AsuNHI GCTAGC 1 cut(s) 1280
AvaI CYCGRG 1 cut(s) 523
BalI TGGCCA 1 cut(s) 845
BauI CACGAG 1 cut(s) 987
Bbv12I GWGCWC 1 cut(s) 1364
BbvI GCAGC 1 cut(s) 473
BccI CCATC 3 cut(s) 522, 1131, 1172
BciT130I CCWGG 1 cut(s) 303
BciVI GTATCC 1 cut(s) 600
BclI TGATCA 1 cut(s) 333
BcoDI GTCTC 5 cut(s) 245, 929, 990, 1370, 1376
BfaI CTAG 4 cut(s) 443, 611, 1281, 1565
BfmI CTRYAG 2 cut(s) 1033, 1242
BfuAI ACCTGC 1 cut(s) 1582
BfuI GTATCC 1 cut(s) 600
BisI GCNGC 1 cut(s) 487
BlsI GCNGC 1 cut(s) 488
Bme1390I CCNGG 1 cut(s) 303
BmeT110I CYCGRG 1 cut(s) 523
BmrFI CCNGG 1 cut(s) 303
BmsI GCATC 4 cut(s) 436, 1237, 1297, 1505
BmtI GCTAGC 1 cut(s) 1284
BplI GAGNNNNNCTC 2 cut(s) 506, 538
BpuEI CTTGAG 1 cut(s) 88
BsaI GGTCTC 1 cut(s) 1370
BsaJI CCNNGG 3 cut(s) 312, 846, 1510
Bsc4I CCNNNNNNNGG 1 cut(s) 194
Bse1I ACTGG 1 cut(s) 199
BseBI CCWGG 1 cut(s) 303
BseDI CCNNGG 3 cut(s) 312, 846, 1510
BseGI GGATG 3 cut(s) 136, 1312, 1520
BseLI CCNNNNNNNGG 1 cut(s) 194
BseMII CTCAG 2 cut(s) 651, 716
BseNI ACTGG 1 cut(s) 199
BseRI GAGGAG 2 cut(s) 791, 1197
BseXI GCAGC 1 cut(s) 473
BshFI GGCC 1 cut(s) 845
BsiHKAI GWGCWC 1 cut(s) 1364
BsiHKCI CYCGRG 1 cut(s) 523
BslFI GGGAC 2 cut(s) 759, 805
BslI CCNNNNNNNGG 1 cut(s) 194
BsmAI GTCTC 5 cut(s) 245, 929, 990, 1370, 1376
BsmFI GGGAC 2 cut(s) 759, 805
BsmI GAATGC 1 cut(s) 676
BsnI GGCC 1 cut(s) 845
Bso31I GGTCTC 1 cut(s) 1370
BsoBI CYCGRG 1 cut(s) 523
Bsp1286I GDGCHC 1 cut(s) 1364
Bsp143I GATC 5 cut(s) 333, 349, 781, 835, 1417
Bsp19I CCATGG 1 cut(s) 1510
BspACI CCGC 2 cut(s) 449, 1518
BspANI GGCC 1 cut(s) 845
BspCNI CTCAG 2 cut(s) 650, 715
BspMI ACCTGC 1 cut(s) 1582
BspOI GCTAGC 1 cut(s) 1284
BspPI GGATC 2 cut(s) 344, 789
BspTNI GGTCTC 1 cut(s) 1370
BsrI ACTGG 1 cut(s) 199
BssECI CCNNGG 3 cut(s) 312, 846, 1510
BssMI GATC 5 cut(s) 333, 349, 781, 835, 1417
BssSI CACGAG 1 cut(s) 987
BssT1I CCWWGG 2 cut(s) 846, 1510
Bst2BI CACGAG 1 cut(s) 987
Bst2UI CCWGG 1 cut(s) 303
Bst4CI ACNGT 4 cut(s) 814, 888, 1366, 1387
Bst6I CTCTTC 5 cut(s) 542, 792, 1127, 1456, 1463
BstC8I GCNNGC 2 cut(s) 1239, 1282
BstDEI CTNAG 4 cut(s) 637, 702, 923, 1143
BstDSI CCRYGG 1 cut(s) 1510
BstF5I GGATG 3 cut(s) 136, 1312, 1520
BstKTI GATC 5 cut(s) 336, 352, 784, 838, 1420
BstMAI GTCTC 5 cut(s) 245, 929, 990, 1370, 1376
BstMBI GATC 5 cut(s) 333, 349, 781, 835, 1417
BstMWI GCNNNNNNNGC 2 cut(s) 1247, 1515
BstNI CCWGG 1 cut(s) 303
BstNSI RCATGY 4 cut(s) 620, 1073, 1241, 1403
BstSCI CCNGG 1 cut(s) 301
BstSFI CTRYAG 2 cut(s) 1033, 1242
BstV1I GCAGC 1 cut(s) 473
BstX2I RGATCY 1 cut(s) 349
BstYI RGATCY 1 cut(s) 349
BsuI GTATCC 1 cut(s) 600
BsuRI GGCC 1 cut(s) 845
BtgI CCRYGG 1 cut(s) 1510
BtsCI GGATG 3 cut(s) 136, 1312, 1520
BtsI GCAGTG 1 cut(s) 963
BtsIMutI CAGTG 2 cut(s) 192, 963
BveI ACCTGC 1 cut(s) 1582
Cac8I GCNNGC 2 cut(s) 1239, 1282
Csp6I GTAC 1 cut(s) 1123
CviQI GTAC 1 cut(s) 1123
DdeI CTNAG 4 cut(s) 637, 702, 923, 1143
DpnI GATC 5 cut(s) 335, 351, 783, 837, 1419
DpnII GATC 5 cut(s) 333, 349, 781, 835, 1417
DraI TTTAAA 1 cut(s) 1327
DrdI GACNNNNNNGTC 1 cut(s) 1527
DseDI GACNNNNNNGTC 1 cut(s) 1527
EaeI YGGCCR 1 cut(s) 843
Eam1104I CTCTTC 5 cut(s) 542, 792, 1127, 1456, 1463
EarI CTCTTC 5 cut(s) 542, 792, 1127, 1456, 1463
Eco130I CCWWGG 2 cut(s) 846, 1510
Eco31I GGTCTC 1 cut(s) 1370
Eco88I CYCGRG 1 cut(s) 523
EcoRI GAATTC 2 cut(s) 496, 709
EcoRII CCWGG 1 cut(s) 301
EcoT14I CCWWGG 2 cut(s) 846, 1510
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 846, 1510
FalI AAGNNNNNCTT 2 cut(s) 97, 129
FaqI GGGAC 2 cut(s) 759, 805
FauNDI CATATG 2 cut(s) 491, 840
FbaI TGATCA 1 cut(s) 333
FblI GTMKAC 1 cut(s) 1066
Fnu4HI GCNGC 1 cut(s) 487
FokI GGATG 3 cut(s) 143, 1319, 1527
Fsp4HI GCNGC 1 cut(s) 487
FspBI CTAG 4 cut(s) 443, 611, 1281, 1565
GluI GCNGC 1 cut(s) 487
HaeIII GGCC 1 cut(s) 845
HincII GTYRAC 1 cut(s) 1067
HindII GTYRAC 1 cut(s) 1067
HphI GGTGA 1 cut(s) 746
Hpy166II GTNNAC 4 cut(s) 853, 992, 1067, 1355
Hpy188I TCNGA 6 cut(s) 58, 316, 376, 436, 1015, 1177
Hpy188III TCNNGA 7 cut(s) 105, 525, 688, 881, 989, 1097, 1129
Hpy8I GTNNAC 4 cut(s) 853, 992, 1067, 1355
HpyAV CCTTC 3 cut(s) 796, 1046, 1440
HpyCH4III ACNGT 4 cut(s) 814, 888, 1366, 1387
HpyCH4V TGCA 9 cut(s) 4, 185, 236, 408, 489, 951, 981, 1214, 1250
HpyF10VI GCNNNNNNNGC 2 cut(s) 1247, 1515
HpyF3I CTNAG 4 cut(s) 637, 702, 923, 1143
Ksp22I TGATCA 1 cut(s) 333
Kzo9I GATC 5 cut(s) 333, 349, 781, 835, 1417
LpnPI CCDG 8 cut(s) 180, 288, 315, 366, 627, 1247, 1428, 1587
Lsp1109I GCAGC 1 cut(s) 473
LweI GCATC 4 cut(s) 436, 1237, 1297, 1505
MaeI CTAG 4 cut(s) 443, 611, 1281, 1565
MaeIII GTNAC 3 cut(s) 73, 1387, 1533
MalI GATC 5 cut(s) 335, 351, 783, 837, 1419
MboI GATC 5 cut(s) 333, 349, 781, 835, 1417
MfeI CAATTG 1 cut(s) 1251
MflI RGATCY 1 cut(s) 349
MhlI GDGCHC 1 cut(s) 1364
MlsI TGGCCA 1 cut(s) 845
MluNI TGGCCA 1 cut(s) 845
MlyI GAGTC 6 cut(s) 89, 515, 587, 679, 931, 1168
MmeI TCCRAC 3 cut(s) 555, 1284, 1580
Mox20I TGGCCA 1 cut(s) 845
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 2 cut(s) 381, 1056
MscI TGGCCA 1 cut(s) 845
MseI TTAA 9 cut(s) 201, 453, 738, 789, 1089, 1326, 1407, 1479, 1598
Msp20I TGGCCA 1 cut(s) 845
MspA1I CMGCKG 1 cut(s) 641
MspR9I CCNGG 1 cut(s) 303
MunI CAATTG 1 cut(s) 1251
Mva1269I GAATGC 1 cut(s) 676
MvaI CCWGG 1 cut(s) 303
MwoI GCNNNNNNNGC 2 cut(s) 1247, 1515
NcoI CCATGG 1 cut(s) 1510
NdeI CATATG 2 cut(s) 491, 840
NdeII GATC 5 cut(s) 333, 349, 781, 835, 1417
NheI GCTAGC 1 cut(s) 1280
NmuCI GTSAC 1 cut(s) 1533
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 4 cut(s) 620, 1073, 1241, 1403
PaeI GCATGC 1 cut(s) 1241
PaeR7I CTCGAG 1 cut(s) 523
PciI ACATGT 2 cut(s) 616, 1069
PctI GAATGC 1 cut(s) 676
PdmI GAANNNNTTC 2 cut(s) 381, 1056
PfeI GAWTC 8 cut(s) 29, 53, 260, 592, 1010, 1093, 1172, 1298
PflMI CCANNNNNTGG 1 cut(s) 194
PkrI GCNGC 1 cut(s) 488
PleI GAGTC 6 cut(s) 89, 515, 586, 678, 931, 1167
PpsI GAGTC 6 cut(s) 89, 515, 586, 678, 931, 1167
PscI ACATGT 2 cut(s) 616, 1069
PshBI ATTAAT 1 cut(s) 789
Psp6I CCWGG 1 cut(s) 301
PspGI CCWGG 1 cut(s) 301
PsuI RGATCY 1 cut(s) 349
PvuII CAGCTG 1 cut(s) 641
RsaI GTAC 1 cut(s) 1124
RsaNI GTAC 1 cut(s) 1123
SalI GTCGAC 1 cut(s) 1065
SaqAI TTAA 9 cut(s) 201, 453, 738, 789, 1089, 1326, 1407, 1479, 1598
SatI GCNGC 1 cut(s) 487
Sau3AI GATC 5 cut(s) 333, 349, 781, 835, 1417
SchI GAGTC 6 cut(s) 89, 515, 587, 679, 931, 1168
ScrFI CCNGG 1 cut(s) 303
SduI GDGCHC 1 cut(s) 1364
SfaNI GCATC 4 cut(s) 436, 1237, 1297, 1505
SfcI CTRYAG 2 cut(s) 1033, 1242
Sfr274I CTCGAG 1 cut(s) 523
SlaI CTCGAG 1 cut(s) 523
SmlI CTYRAG 2 cut(s) 103, 523
SmoI CTYRAG 2 cut(s) 103, 523
SphI GCATGC 1 cut(s) 1241
SsiI CCGC 2 cut(s) 449, 1518
SspI AATATT 2 cut(s) 793, 1339
SspMI CTAG 4 cut(s) 443, 611, 1281, 1565
StyD4I CCNGG 1 cut(s) 301
StyI CCWWGG 2 cut(s) 846, 1510
TaaI ACNGT 4 cut(s) 814, 888, 1366, 1387
TaqI TCGA 5 cut(s) 460, 524, 581, 707, 1066
TaqII GACCGA 1 cut(s) 1394
TatI WGTACW 1 cut(s) 1122
TfiI GAWTC 8 cut(s) 29, 53, 260, 592, 1010, 1093, 1172, 1298
Tru1I TTAA 9 cut(s) 201, 453, 738, 789, 1089, 1326, 1407, 1479, 1598
Tru9I TTAA 9 cut(s) 201, 453, 738, 789, 1089, 1326, 1407, 1479, 1598
TscAI CASTG 2 cut(s) 199, 963
TseFI GTSAC 1 cut(s) 1533
TseI GCWGC 1 cut(s) 486
Tsp45I GTSAC 1 cut(s) 1533
TspDTI ATGAA 8 cut(s) 386, 470, 588, 888, 1017, 1362, 1425, 1620
TspRI CASTG 2 cut(s) 199, 963
Van91I CCANNNNNTGG 1 cut(s) 194
VspI ATTAAT 1 cut(s) 789
XapI RAATTY 6 cut(s) 284, 428, 496, 709, 722, 1321
XceI RCATGY 4 cut(s) 620, 1073, 1241, 1403
XhoI CTCGAG 1 cut(s) 523
XmiI GTMKAC 1 cut(s) 1066
XmnI GAANNNNTTC 2 cut(s) 381, 1056
XspI CTAG 4 cut(s) 443, 611, 1281, 1565
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.