Rorug03G0203000

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000164
Physical Location & Seq
Forward (+)
18036281 .. 18038793
2513 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0203000.1

Sequence Viewer

Length: 1674 bp
ATGTCTGTCCAAACAATTCCAGCAGCTGAATCCCAGATCAATACTAAGCCAGAAGTTGTTCGGCGCACAGCAAATTATGAACCTAGCATTTGGGGAGATCGGTTTGCTAACTATGCTGAAGACATTGTAACTCAAGCTCATATGCAAAAACAAGTTGAGGAGCTGAAACAAGTAGTGAGGAAGGAAGTATTCACTGATGCTGCTGATGATTTTTCACATCAACTGAAGCTAATTGATGCAATCCAGCGCCTCGGTGTGGCTTACCATTTTGAAACTGATATAGAACAAGCCCTGGAACGTATACATGCTACCTATCAAGATGATGATGGTGATCTGTACAATGTTGCTCTTCGTTTTCGACTACTCAGACGACATGGATATAATGTTTCCTGCGATGTATTCAACAAGTTCAAAGATGCTAATGGTGACTTCAAGGAAAGCTTAGTTACTGATGTTTCTGGTATGCTAAGCTTCTATGAGGCAGCCCATCTAATGGTTCATGGAGAAAAATTACTAGAAGAGGCTCTCGTTTTTACCACCACTCATCTCCAGACTGCAACAACTTCAACCAGTGCAAGCTCTCTGCTGAAAGCACAAATAACTGAAGCCCTAGAGAGACCTCTATTAAAAACTGTAGAGAGGTTAGGTGCTCGGCGTTACATGTCAATATACCAAGATGAAGCTTCACACAATGAAGATTTACTGAAACTTGCCAAGTTAGATTTCAATCTTGTTCAGTGTTTACACAAAAAGGAACTCAGTGACATTATAAGATGGTATAAGGGAGTAGACTTTGCAAGGAGGTTGCCTTTTGCTCGAGATAGGCTCGTGGAGATGTTCTTTTGGATAACGGGAATATATTTTGAACCCCAATACGTGTTCGGGAGAAACATTCTGACGAAGCTGATTGAGTTAGTAACAGTAATGGATGATATATATGATGCATTCGGTACATTCGAAGAACTCGTCATCTTAACTGAAGCAATTGAGAGATGGGATGCTAGTTGCATGGATCAATTGCCAGACTATATGCAACCATTTTATCTAACACTTCTGGATGTTGTCAATGAAGTTGGGGAGGAACTGATAAAGCAAGGAAGATCATACCAACTTTACTATGTAAAAGAAATTATGAAGAATCAAGCCAGGCTCTATTTTGCTGAGGCCAGATGGTTCCACGAAGGATGCACCCCAAGAATGGATGAGTATATGCGTGTTGCGGCATCTTGTATCGGTAACACCTTGCTTTCAGTGGTATCTTTAGTAGATATGGGAGACATTATAACAAAAGAGACATTTGAGTGGTTGACCAATGATCCTAAAATTCTTAGAGCTTCGAATATCATATTTAGGCTTATGGATGACATTGCTGGGCACAAGTTTGAGAAAGAGAGAGGGCATGTTGCTTCTTGTATCGATTGCTACATGAATGAATATGGGGTCTCAGAGCAAGAGACAATTGATGTCTTTAACAAACGAATTGTGGATTCGTGGATGGATATAAACGAAGAGTTTCTGAGACCCACTGCTGCGCCAATGCCTGTGCTTAATCGTGTTCTTAACTTAACTCGAGTGGTTGATCTCCTTTACAAAAGCGGAGATGCCTTCACGCATGTTGGAAAACTGATGAAAGACACTATTGCTTCACTGTTTATTGATCCAGTGACACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

557

Amino Acids

64.38

Weight (kDa)

5.06

Isoelectric Point (pI)

44.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 30 - 204 5.9e-58 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 262 - 500 6e-92 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 301 - 499 5.1e-55 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000164)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02320 FvH4_1g21472 FvH4_2g00813 FvH4_2g02512 FvH4_2g03921 FvH4_2g23460 FvH4_3g29141 FvH4_4g05791 FvH4_4g06321 FvH4_4g15595 FvH4_4g18162 FvH4_4g18163 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_5g31093 FvH4_6g01982 FvH4_6g21931 FvH4_6g44691 FvH4_6g48541
prunus_persica Prupe.1G074100_v2.0.a1 Prupe.3G021400_v2.0.a1
pyrus_communis pycom02g18570 pycom14g00670
rosa_chinensis RchiOBHm_Chr1g0379201 RchiOBHm_Chr1g0379361 RchiOBHm_Chr4g0405981 RchiOBHm_Chr5g0073641 RchiOBHm_Chr5g0073651 RchiOBHm_Chr7g0236661
rosa_multiflora Rmu_co8179562.1_g000001 Rmu_co8343647.1_g000001 Rmu_sc0000041.1_g000017 Rmu_sc0000114.1_g000020 Rmu_sc0000286.1_g000006 Rmu_sc0000308.1_g000038 Rmu_sc0000365.1_g000061 Rmu_sc0000365.1_g000062 Rmu_sc0000538.1_g000060 Rmu_sc0000538.1_g000061 Rmu_sc0000586.1_g000016 Rmu_sc0000898.1_g000007 Rmu_sc0000913.1_g000003 Rmu_sc0000913.1_g000004 Rmu_sc0000996.1_g000006 Rmu_sc0000996.1_g000007 Rmu_sc0000998.1_g000003 Rmu_sc0001350.1_g000009 Rmu_sc0002079.1_g000009 Rmu_sc0002200.1_g000013 Rmu_sc0002226.1_g000025 Rmu_sc0002279.1_g000014 Rmu_sc0002478.1_g000014 Rmu_sc0002717.1_g000004 Rmu_sc0002868.1_g000027 Rmu_sc0002889.1_g000043 Rmu_sc0003023.1_g000001 Rmu_sc0003110.1_g000006 Rmu_sc0003226.1_g000028 Rmu_sc0003226.1_g000029 Rmu_sc0003337.1_g000053 Rmu_sc0003558.1_g000007 Rmu_sc0004345.1_g000014 Rmu_sc0004383.1_g000007 Rmu_sc0004888.1_g000021 Rmu_sc0005114.1_g000012 Rmu_sc0005223.1_g000019 Rmu_sc0005223.1_g000020 Rmu_sc0005639.1_g000025 Rmu_sc0005685.1_g000027 Rmu_sc0005992.1_g000002 Rmu_sc0006326.1_g000034 Rmu_sc0006326.1_g000035 Rmu_sc0007390.1_g000012 Rmu_sc0007451.1_g000006 Rmu_sc0007825.1_g000003 Rmu_sc0008600.1_g000023 Rmu_sc0009291.1_g000003 Rmu_sc0012046.1_g000001 Rmu_sc0012046.1_g000002 Rmu_sc0012710.1_g000001 Rmu_sc0015238.1_g000001 Rmu_sc0016125.1_g000003 Rmu_sc0016175.1_g000001 Rmu_sc0016898.1_g000001 Rmu_sc0017323.1_g000010 Rmu_sc0017874.1_g000002 Rmu_sc0019167.1_g000001 Rmu_sc0020815.1_g000006 Rmu_sc0025564.1_g000001 Rmu_sc0026418.1_g000001 Rmu_sc0035188.1_g000002 Rmu_sc0039254.1_g000001 Rmu_ssc0000120.1_g000015 Rmu_ssc0000120.1_g000016 Rmu_ssc0000330.1_g000023 Rmu_ssc0000433.1_g000004
rosa_roxburghii Rroxscaffold_1G00047130 Rroxscaffold_1G00051320 Rroxscaffold_1G00056600 Rroxscaffold_2G00109650 Rroxscaffold_2G00119980 Rroxscaffold_3G00222550 Rroxscaffold_3G00224980 Rroxscaffold_3G00251020 Rroxscaffold_6G00411190 Rroxscaffold_7G00166520 Rroxscaffold_7G00172920 Rroxscaffold_7G00191860 Rroxscaffold_7G00194430
rosa_rugosa Rorug01G0198900 Rorug01G0217300 Rorug01G0244500 Rorug02G0147400 Rorug02G0152200 Rorug02G0595500 Rorug02G0595600 Rorug03G0060500 Rorug03G0203000 Rorug03G0285800 Rorug04G0027200 Rorug04G0027300 Rorug04G0225800 Rorug05G0073400 Rorug05G0213300 Rorug05G0324600 Rorug05G0390900 Rorug05G0391000 Rorug05G0391100 Rorug05G0391200 Rorug05G0462900 Rorug05G0473000 Rorug06G0256500 Rorug07G0199000 Rorug07G0208800 Rorug07G0208800 Rorug07G0316600 Rorug07G0316700
rosa_samantha Rh2BG532400 Rh2CG581900 Rh3CG322600 Rh6AG079900 Rh6AG250800 Rh6AG496300 Rh6BG506100 Rh6CG126000 Rh6CG511700 Rh6DG109400 Rh6DG112700 Rh7CG104500 Rh7CG322000 Rh7CG431500
rosa_wichuraiana Rw0G020410 Rw1G009190 Rw1G014580 Rw1G021000 Rw1G022190 Rw2G025900 Rw2G029920 Rw2G037530 Rw3G018560 Rw3G020560 Rw4G008500 Rw4G022520 Rw5G019030 Rw5G031180 Rw5G044830 Rw6G005010 Rw6G006890 Rw6G011330 Rw6G011380 Rw6G023900 Rw7G028490 Rw7G030170 Rw7G030370 Rw7G032030 Rw7G032040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 770, 1283
AccB7I CCANNNNNTGG 1 cut(s) 493
AccI GTMKAC 2 cut(s) 301, 789
AciI CCGC 2 cut(s) 1220, 1596
AclWI GGATC 3 cut(s) 1020, 1310, 1652
AcsI RAATTY 1 cut(s) 1323
AcuI CTGAAG 4 cut(s) 138, 245, 624, 999
AfaI GTAC 2 cut(s) 338, 952
AfiI CCNNNNNNNGG 3 cut(s) 256, 493, 1198
AflIII ACRYGT 2 cut(s) 660, 876
AgsI TTSAA 7 cut(s) 272, 403, 412, 433, 567, 727, 866
AjnI CCWGG 2 cut(s) 291, 1145
AjuI GAANNNNNNNTTGG 2 cut(s) 707, 739
Alw21I GWGCWC 1 cut(s) 652
Alw26I GTCTC 6 cut(s) 610, 1269, 1286, 1447, 1448, 1513
AlwI GGATC 3 cut(s) 1020, 1310, 1652
AlwNI CAGNNNCTG 1 cut(s) 26
Ama87I CYCGRG 2 cut(s) 816, 1569
AoxI GGCC 1 cut(s) 1164
ApeKI GCWGC 4 cut(s) 23, 200, 482, 1529
ApoI RAATTY 1 cut(s) 1323
ArsI GACNNNNNNTTYG 2 cut(s) 951, 983
Asp700I GAANNNNTTC 2 cut(s) 57, 1512
AspLEI GCGC 3 cut(s) 66, 249, 1534
AsuHPI GGTGA 2 cut(s) 341, 437
AsuII TTCGAA 2 cut(s) 957, 1337
AvaI CYCGRG 2 cut(s) 816, 1569
BaeGI GKGCMC 1 cut(s) 1377
BauI CACGAG 1 cut(s) 827
BbsI GAAGAC 1 cut(s) 126
Bbv12I GWGCWC 1 cut(s) 652
BbvCI CCTCAGC 1 cut(s) 1161
BbvI GCAGC 4 cut(s) 35, 187, 494, 1516
BccI CCATC 6 cut(s) 320, 495, 768, 987, 1164, 1489
BciT130I CCWGG 2 cut(s) 293, 1147
BcoDI GTCTC 6 cut(s) 610, 1269, 1286, 1447, 1448, 1513
BfaI CTAG 4 cut(s) 84, 515, 611, 1002
BfmI CTRYAG 1 cut(s) 633
BfoI RGCGCY 1 cut(s) 250
BisI GCNGC 5 cut(s) 24, 201, 483, 1221, 1530
BlpI GCTNAGC 1 cut(s) 467
BlsI GCNGC 5 cut(s) 25, 202, 484, 1222, 1531
Bme1390I CCNGG 2 cut(s) 293, 1147
BmeT110I CYCGRG 2 cut(s) 816, 1569
BmiI GGNNCC 1 cut(s) 1175
BmrFI CCNGG 2 cut(s) 293, 1147
BmsI GCATC 8 cut(s) 187, 226, 406, 931, 988, 1175, 1232, 1591
BpiI GAAGAC 1 cut(s) 126
BplI GAGNNNNNCTC 2 cut(s) 810, 842
BpmI CTGGAG 1 cut(s) 533
Bpu10I CCTNAGC 1 cut(s) 1161
Bpu1102I GCTNAGC 1 cut(s) 467
Bpu14I TTCGAA 2 cut(s) 957, 1337
BpuEI CTTGAG 1 cut(s) 117
Bsa29I ATCGAT 1 cut(s) 1416
BsaAI YACGTR 1 cut(s) 877
BsaBI GATNNNNATC 2 cut(s) 330, 726
BsaI GGTCTC 3 cut(s) 610, 1447, 1513
BsaJI CCNNGG 2 cut(s) 250, 291
Bsc4I CCNNNNNNNGG 3 cut(s) 256, 493, 1198
Bse1I ACTGG 2 cut(s) 570, 1661
Bse3DI GCAATG 1 cut(s) 1365
Bse8I GATNNNNATC 2 cut(s) 330, 726
BseBI CCWGG 2 cut(s) 293, 1147
BseCI ATCGAT 1 cut(s) 1416
BseDI CCNNGG 2 cut(s) 250, 291
BseGI GGATG 7 cut(s) 934, 1003, 1063, 1190, 1207, 1366, 1500
BseJI GATNNNNATC 2 cut(s) 330, 726
BseLI CCNNNNNNNGG 3 cut(s) 256, 493, 1198
BseMI GCAATG 1 cut(s) 1365
BseMII CTCAG 5 cut(s) 379, 772, 1152, 1458, 1508
BseNI ACTGG 2 cut(s) 570, 1661
BseRI GAGGAG 1 cut(s) 173
BseSI GKGCMC 1 cut(s) 1377
BseXI GCAGC 4 cut(s) 35, 187, 494, 1516
BseYI CCCAGC 1 cut(s) 1370
BshFI GGCC 1 cut(s) 1166
BshVI ATCGAT 1 cut(s) 1416
BsiHKAI GWGCWC 1 cut(s) 652
BsiHKCI CYCGRG 2 cut(s) 816, 1569
BslI CCNNNNNNNGG 3 cut(s) 256, 493, 1198
BsmAI GTCTC 6 cut(s) 610, 1269, 1286, 1447, 1448, 1513
BsmI GAATGC 1 cut(s) 944
BsnI GGCC 1 cut(s) 1166
Bso31I GGTCTC 3 cut(s) 610, 1447, 1513
BsoBI CYCGRG 2 cut(s) 816, 1569
Bsp119I TTCGAA 2 cut(s) 957, 1337
Bsp1286I GDGCHC 2 cut(s) 652, 1377
Bsp1407I TGTACA 1 cut(s) 336
Bsp143I GATC 8 cut(s) 36, 97, 331, 1012, 1100, 1315, 1579, 1657
Bsp1720I GCTNAGC 1 cut(s) 467
BspACI CCGC 2 cut(s) 1220, 1596
BspANI GGCC 1 cut(s) 1166
BspCNI CTCAG 5 cut(s) 378, 771, 1153, 1457, 1509
BspDI ATCGAT 1 cut(s) 1416
BspLI GGNNCC 1 cut(s) 1175
BspPI GGATC 3 cut(s) 1020, 1310, 1652
BspQI GCTCTTC 1 cut(s) 354
BspT104I TTCGAA 2 cut(s) 957, 1337
BspTNI GGTCTC 3 cut(s) 610, 1447, 1513
BsrDI GCAATG 1 cut(s) 1365
BsrGI TGTACA 1 cut(s) 336
BsrI ACTGG 2 cut(s) 570, 1661
BssECI CCNNGG 2 cut(s) 250, 291
BssMI GATC 8 cut(s) 36, 97, 331, 1012, 1100, 1315, 1579, 1657
BssNAI GTATAC 1 cut(s) 302
BssSI CACGAG 1 cut(s) 827
Bst1107I GTATAC 1 cut(s) 302
Bst2BI CACGAG 1 cut(s) 827
Bst2UI CCWGG 2 cut(s) 293, 1147
Bst4CI ACNGT 3 cut(s) 634, 922, 1650
Bst6I CTCTTC 3 cut(s) 354, 513, 1503
BstAUI TGTACA 1 cut(s) 336
BstBAI YACGTR 1 cut(s) 877
BstBI TTCGAA 2 cut(s) 957, 1337
BstC8I GCNNGC 1 cut(s) 577
BstDEI CTNAG 9 cut(s) 45, 365, 442, 467, 758, 1161, 1328, 1444, 1517
BstF5I GGATG 7 cut(s) 934, 1003, 1063, 1190, 1207, 1366, 1500
BstH2I RGCGCY 1 cut(s) 250
BstHHI GCGC 3 cut(s) 66, 249, 1534
BstKTI GATC 8 cut(s) 39, 100, 334, 1015, 1103, 1318, 1582, 1660
BstMAI GTCTC 6 cut(s) 610, 1269, 1286, 1447, 1448, 1513
BstMBI GATC 8 cut(s) 36, 97, 331, 1012, 1100, 1315, 1579, 1657
BstMWI GCNNNNNNNGC 1 cut(s) 113
BstNI CCWGG 2 cut(s) 293, 1147
BstNSI RCATGY 4 cut(s) 308, 664, 1403, 1616
BstSCI CCNGG 2 cut(s) 291, 1145
BstSFI CTRYAG 1 cut(s) 633
BstSLI GKGCMC 1 cut(s) 1377
BstV1I GCAGC 4 cut(s) 35, 187, 494, 1516
BstV2I GAAGAC 1 cut(s) 126
BstZ17I GTATAC 1 cut(s) 302
Bsu15I ATCGAT 1 cut(s) 1416
BsuRI GGCC 1 cut(s) 1166
BsuTUI ATCGAT 1 cut(s) 1416
BtgZI GCGATG 1 cut(s) 408
BtsCI GGATG 7 cut(s) 934, 1003, 1063, 1190, 1207, 1366, 1500
BtsI GCAGTG 1 cut(s) 1524
BtsIMutI CAGTG 8 cut(s) 192, 577, 743, 766, 1257, 1524, 1646, 1668
Cac8I GCNNGC 1 cut(s) 577
CaiI CAGNNNCTG 1 cut(s) 26
CfoI GCGC 3 cut(s) 66, 249, 1534
ClaI ATCGAT 1 cut(s) 1416
Csp6I GTAC 2 cut(s) 337, 951
CviAII CATG 8 cut(s) 305, 374, 500, 661, 1009, 1400, 1426, 1613
CviQI GTAC 2 cut(s) 337, 951
DdeI CTNAG 9 cut(s) 45, 365, 442, 467, 758, 1161, 1328, 1444, 1517
DpnI GATC 8 cut(s) 38, 99, 333, 1014, 1102, 1317, 1581, 1659
DpnII GATC 8 cut(s) 36, 97, 331, 1012, 1100, 1315, 1579, 1657
Eam1104I CTCTTC 3 cut(s) 354, 513, 1503
EarI CTCTTC 3 cut(s) 354, 513, 1503
Eco31I GGTCTC 3 cut(s) 610, 1447, 1513
Eco57I CTGAAG 4 cut(s) 138, 245, 624, 999
Eco88I CYCGRG 2 cut(s) 816, 1569
EcoRII CCWGG 2 cut(s) 291, 1145
EcoT22I ATGCAT 1 cut(s) 946
FaeI CATG 8 cut(s) 308, 377, 503, 664, 1012, 1403, 1429, 1616
FalI AAGNNNNNCTT 2 cut(s) 425, 457
FatI CATG 8 cut(s) 304, 373, 499, 660, 1008, 1399, 1425, 1612
FauNDI CATATG 1 cut(s) 141
FblI GTMKAC 2 cut(s) 301, 789
Fnu4HI GCNGC 5 cut(s) 24, 201, 483, 1221, 1530
FokI GGATG 7 cut(s) 941, 1010, 1070, 1197, 1214, 1373, 1507
Fsp4HI GCNGC 5 cut(s) 24, 201, 483, 1221, 1530
FspBI CTAG 4 cut(s) 84, 515, 611, 1002
GlaI GCGC 3 cut(s) 65, 248, 1533
GluI GCNGC 5 cut(s) 24, 201, 483, 1221, 1530
GsaI CCCAGC 1 cut(s) 1374
GsuI CTGGAG 1 cut(s) 533
HaeII RGCGCY 1 cut(s) 250
HaeIII GGCC 1 cut(s) 1166
HhaI GCGC 3 cut(s) 66, 249, 1534
Hin1II CATG 8 cut(s) 308, 377, 503, 664, 1012, 1403, 1429, 1616
Hin6I GCGC 3 cut(s) 64, 247, 1532
HinP1I GCGC 3 cut(s) 64, 247, 1532
HincII GTYRAC 1 cut(s) 1308
HindII GTYRAC 1 cut(s) 1308
HindIII AAGCTT 3 cut(s) 439, 469, 681
HinfI GANTC 3 cut(s) 29, 1138, 1487
HphI GGTGA 2 cut(s) 341, 437
Hpy166II GTNNAC 4 cut(s) 302, 743, 790, 1308
Hpy188I TCNGA 5 cut(s) 368, 897, 1447, 1518, 1673
Hpy188III TCNNGA 5 cut(s) 317, 550, 818, 883, 1055
Hpy8I GTNNAC 4 cut(s) 302, 743, 790, 1308
HpyAV CCTTC 3 cut(s) 175, 1175, 1615
HpyCH4III ACNGT 3 cut(s) 634, 922, 1650
HpyCH4IV ACGT 2 cut(s) 298, 876
HpyCH4V TGCA 9 cut(s) 145, 239, 557, 575, 797, 944, 1008, 1033, 1188
HpyF10VI GCNNNNNNNGC 1 cut(s) 113
HpyF3I CTNAG 9 cut(s) 45, 365, 442, 467, 758, 1161, 1328, 1444, 1517
HpySE526I ACGT 2 cut(s) 298, 876
Hsp92II CATG 8 cut(s) 308, 377, 503, 664, 1012, 1403, 1429, 1616
HspAI GCGC 3 cut(s) 64, 247, 1532
Kzo9I GATC 8 cut(s) 36, 97, 331, 1012, 1100, 1315, 1579, 1657
LguI GCTCTTC 1 cut(s) 354
LmnI GCTCC 1 cut(s) 160
Lsp1109I GCAGC 4 cut(s) 35, 187, 494, 1516
LweI GCATC 8 cut(s) 187, 226, 406, 931, 988, 1175, 1232, 1591
MaeI CTAG 4 cut(s) 84, 515, 611, 1002
MaeII ACGT 2 cut(s) 298, 876
MaeIII GTNAC 8 cut(s) 127, 425, 445, 656, 761, 916, 1235, 1663
MalI GATC 8 cut(s) 38, 99, 333, 1014, 1102, 1317, 1581, 1659
MboI GATC 8 cut(s) 36, 97, 331, 1012, 1100, 1315, 1579, 1657
MboII GAAGA 8 cut(s) 131, 341, 530, 707, 971, 1110, 1147, 1520
MfeI CAATTG 3 cut(s) 984, 1016, 1458
MhlI GDGCHC 2 cut(s) 652, 1377
MmeI TCCRAC 1 cut(s) 1597
Mph1103I ATGCAT 1 cut(s) 946
MroXI GAANNNNTTC 2 cut(s) 57, 1512
MseI TTAA 6 cut(s) 626, 974, 1470, 1548, 1560, 1565
MslI CAYNNNNRTG 1 cut(s) 1300
MspA1I CMGCKG 1 cut(s) 26
MspR9I CCNGG 2 cut(s) 293, 1147
MunI CAATTG 3 cut(s) 984, 1016, 1458
Mva1269I GAATGC 1 cut(s) 944
MvaI CCWGG 2 cut(s) 293, 1147
MwoI GCNNNNNNNGC 1 cut(s) 113
NdeI CATATG 1 cut(s) 141
NdeII GATC 8 cut(s) 36, 97, 331, 1012, 1100, 1315, 1579, 1657
NlaIII CATG 8 cut(s) 308, 377, 503, 664, 1012, 1403, 1429, 1616
NlaIV GGNNCC 1 cut(s) 1175
NmeAIII GCCGAG 1 cut(s) 631
NmuCI GTSAC 3 cut(s) 425, 761, 1663
NsiI ATGCAT 1 cut(s) 946
NspI RCATGY 4 cut(s) 308, 664, 1403, 1616
NspV TTCGAA 2 cut(s) 957, 1337
PaeR7I CTCGAG 2 cut(s) 816, 1569
PciI ACATGT 1 cut(s) 660
PciSI GCTCTTC 1 cut(s) 354
PcsI WCGNNNNNNNCGW 2 cut(s) 954, 963
PctI GAATGC 1 cut(s) 944
PdmI GAANNNNTTC 2 cut(s) 57, 1512
PfeI GAWTC 3 cut(s) 29, 1138, 1487
PflMI CCANNNNNTGG 1 cut(s) 493
PkrI GCNGC 5 cut(s) 25, 202, 484, 1222, 1531
Ppu21I YACGTR 1 cut(s) 877
PscI ACATGT 1 cut(s) 660
PsiI TTATAA 2 cut(s) 770, 1283
Psp6I CCWGG 2 cut(s) 291, 1145
PspFI CCCAGC 1 cut(s) 1370
PspGI CCWGG 2 cut(s) 291, 1145
PspN4I GGNNCC 1 cut(s) 1175
PspXI VCTCGAGB 1 cut(s) 1569
PstNI CAGNNNCTG 1 cut(s) 26
PvuII CAGCTG 1 cut(s) 26
RsaI GTAC 2 cut(s) 338, 952
RsaNI GTAC 2 cut(s) 337, 951
RseI CAYNNNNRTG 1 cut(s) 1300
SapI GCTCTTC 1 cut(s) 354
SaqAI TTAA 6 cut(s) 626, 974, 1470, 1548, 1560, 1565
SatI GCNGC 5 cut(s) 24, 201, 483, 1221, 1530
Sau3AI GATC 8 cut(s) 36, 97, 331, 1012, 1100, 1315, 1579, 1657
ScrFI CCNGG 2 cut(s) 293, 1147
SduI GDGCHC 2 cut(s) 652, 1377
SfaNI GCATC 8 cut(s) 187, 226, 406, 931, 988, 1175, 1232, 1591
SfcI CTRYAG 1 cut(s) 633
Sfr274I CTCGAG 2 cut(s) 816, 1569
SfuI TTCGAA 2 cut(s) 957, 1337
SlaI CTCGAG 2 cut(s) 816, 1569
SmiMI CAYNNNNRTG 1 cut(s) 1300
SmlI CTYRAG 3 cut(s) 132, 816, 1569
SmoI CTYRAG 3 cut(s) 132, 816, 1569
SsiI CCGC 2 cut(s) 1220, 1596
SspMI CTAG 4 cut(s) 84, 515, 611, 1002
StyD4I CCNGG 2 cut(s) 291, 1145
TaaI ACNGT 3 cut(s) 634, 922, 1650
TaiI ACGT 2 cut(s) 301, 879
TaqI TCGA 6 cut(s) 358, 817, 957, 1337, 1416, 1570
TatI WGTACW 1 cut(s) 336
TauI GCSGC 1 cut(s) 1223
TfiI GAWTC 3 cut(s) 29, 1138, 1487
Tru1I TTAA 6 cut(s) 626, 974, 1470, 1548, 1560, 1565
Tru9I TTAA 6 cut(s) 626, 974, 1470, 1548, 1560, 1565
TscAI CASTG 8 cut(s) 199, 577, 743, 766, 1257, 1531, 1653, 1668
TseFI GTSAC 3 cut(s) 425, 761, 1663
TseI GCWGC 4 cut(s) 23, 200, 482, 1529
Tsp45I GTSAC 3 cut(s) 425, 761, 1663
TspDTI ATGAA 9 cut(s) 93, 488, 693, 708, 1083, 1148, 1442, 1446, 1643
TspRI CASTG 8 cut(s) 199, 577, 743, 766, 1257, 1531, 1653, 1668
Van91I CCANNNNNTGG 1 cut(s) 493
XapI RAATTY 1 cut(s) 1323
XceI RCATGY 4 cut(s) 308, 664, 1403, 1616
XhoI CTCGAG 2 cut(s) 816, 1569
XmiI GTMKAC 2 cut(s) 301, 789
XmnI GAANNNNTTC 2 cut(s) 57, 1512
XspI CTAG 4 cut(s) 84, 515, 611, 1002
Zsp2I ATGCAT 1 cut(s) 946
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.