Rorug05G0462900

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000164
Physical Location & Seq
Forward (+)
63821781 .. 63823697
1917 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0462900.1

Sequence Viewer

Length: 1689 bp
ATGTACGAGGACTTCTTGTTTAATGAAGGTCGGAGTAGTAAGCTGCATGATTCACCTAGACCTGGTACAAGCAAGGGAATCGTGATTAGGGAGGTTGATGCGACTATATCTACTCAAGCAAGCATTGTTGGGCAGCAGTCAAGTGTCCAAGAAAATGAAGGAAGTGGTCTTCACGATGTAGAGATAGATTATTTAGATGAACTTCAATCATTTGGTGGTCTAGAATATGAAAGTGAGGAATGTAGTGAGCATGAAGAAAGTAGTGAGGAGGATGAGGGCAGTGATTATGACCCTTGTGCACATGATGAGGAGTACGACCACTATGGGGTGGATGATGATGATGAATGGTTGAATGAAGAAGATGTTGAAGGGACTGCAACAAGACCAGAATCTGTTCTGGGCAGGTCAACTGTGGATGAAAGTTTAAAACAGTGGGTTGATGAAGAGGACATGTTTGGTGTTGATGATTCAGATGATGAGAAGTTGGTTTATACTATAAATTCTGATGGGGAACGTGAAGAGCTGGGACTCGAATTCAACCCAAAAACAGATATGAAGAAACCCGCTTTCAAACTTAAAATGAAGTTTGCAACAGCGCAGATTCTTAGGGATGCGTTGAGGGAGCATGCCATTCAAGGAGGTTGGGAATATGTGTTCATTAAGAATGACAAAACAAGGATACGGGTGGTTTGTAAGGAGGACAACTGTCCATTTGAGCTTTTTGCTAGCAAACTGCAGTATGAGAGCACATTGATGGTCAAAAGCTATGATCCAGTTCACAAATGCACAAGGAAATTCAACAACAGCATGGTTAGGCAAACGTACCTAACTTCAAAGTTTAAAGATCAGATTGCTCTTAATGAGAGCTGGAAACCAGGTATTTCTCTTACTACACTTGTGATTAATAATGTTAATGAGGTTCTGGAAGTGTTTCTTGTTTGTAACATGTGTTGTAAAATGTTTGGTGATACAGAATCTCTAGCTAAGACAATGTCAGCTAGCATTAGAGCAAGGGTTTCCAAGTCAATGGCTTATAGGGCCAAGAGGGCTGCACTTTTGGAAGTAGAAGGATCCATAAAAGAGCAATATGCAAGGTTGAGAGATTATGGAAGAGAGCTTCAGAGGGCTGATCCAGCCACTACAATTGATATTAAGTGTGCTTTCCCCAATACAAGCAATCTTCCAGTATTTAAAAGAATGTATATTTGTTTGGGGGCTCTTAAGAATGGCTTTAAGGCTGGTTGCAGAACTATTATTGGCTTAGATGGTGCACATCTGAAGAGTTGCTTTGGGGGTCAATTGTTGACGGCTGTTGGTATTGATGCCAATAACACATCATGGGTGATAGCATATGCTATGGTTGAGGCAGAAAGCAAGGATTCATGGATGTGGTTTCTAAAGTTAATGGTTTCTGATCTGAACATTGAGCATGAAGGAAGAGGATGGACCTTCATTAGTGATAAGCAAAAAGGCCTCATACCAGCAATTAAAGAGGTTGTTCCAAGAGCTCATATCAGATTTTGTGTCCGGCACATGTGGACAAACTTTACGAAGTTATTTCCCGGAAAGGTAATGAAAGATCAGATGTGGGCTTGCGCAAAATCAACTACTTTGCCTTACTTTCAGAAGGAGATGGAGGATATGAAGGCCCTTGACTTTGATGCATATAAGTGGCTTACAGGTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

562

Amino Acids

63.97

Weight (kDa)

4.96

Isoelectric Point (pI)

38.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DBD_Tnp_Mut PF03108 195 - 253 1.3e-09 MuDR family transposase
MULE PF10551 419 - 514 7.5e-17 MULE transposase domain
Transposase_mut PF00872 434 - 523 5.4e-06 Transposase, Mutator family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000164)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02320 FvH4_1g21472 FvH4_2g00813 FvH4_2g02512 FvH4_2g03921 FvH4_2g23460 FvH4_3g29141 FvH4_4g05791 FvH4_4g06321 FvH4_4g15595 FvH4_4g18162 FvH4_4g18163 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_5g31093 FvH4_6g01982 FvH4_6g21931 FvH4_6g44691 FvH4_6g48541
prunus_persica Prupe.1G074100_v2.0.a1 Prupe.3G021400_v2.0.a1
pyrus_communis pycom02g18570 pycom14g00670
rosa_chinensis RchiOBHm_Chr1g0379201 RchiOBHm_Chr1g0379361 RchiOBHm_Chr4g0405981 RchiOBHm_Chr5g0073641 RchiOBHm_Chr5g0073651 RchiOBHm_Chr7g0236661
rosa_multiflora Rmu_co8179562.1_g000001 Rmu_co8343647.1_g000001 Rmu_sc0000041.1_g000017 Rmu_sc0000114.1_g000020 Rmu_sc0000286.1_g000006 Rmu_sc0000308.1_g000038 Rmu_sc0000365.1_g000061 Rmu_sc0000365.1_g000062 Rmu_sc0000538.1_g000060 Rmu_sc0000538.1_g000061 Rmu_sc0000586.1_g000016 Rmu_sc0000898.1_g000007 Rmu_sc0000913.1_g000003 Rmu_sc0000913.1_g000004 Rmu_sc0000996.1_g000006 Rmu_sc0000996.1_g000007 Rmu_sc0000998.1_g000003 Rmu_sc0001350.1_g000009 Rmu_sc0002079.1_g000009 Rmu_sc0002200.1_g000013 Rmu_sc0002226.1_g000025 Rmu_sc0002279.1_g000014 Rmu_sc0002478.1_g000014 Rmu_sc0002717.1_g000004 Rmu_sc0002868.1_g000027 Rmu_sc0002889.1_g000043 Rmu_sc0003023.1_g000001 Rmu_sc0003110.1_g000006 Rmu_sc0003226.1_g000028 Rmu_sc0003226.1_g000029 Rmu_sc0003337.1_g000053 Rmu_sc0003558.1_g000007 Rmu_sc0004345.1_g000014 Rmu_sc0004383.1_g000007 Rmu_sc0004888.1_g000021 Rmu_sc0005114.1_g000012 Rmu_sc0005223.1_g000019 Rmu_sc0005223.1_g000020 Rmu_sc0005639.1_g000025 Rmu_sc0005685.1_g000027 Rmu_sc0005992.1_g000002 Rmu_sc0006326.1_g000034 Rmu_sc0006326.1_g000035 Rmu_sc0007390.1_g000012 Rmu_sc0007451.1_g000006 Rmu_sc0007825.1_g000003 Rmu_sc0008600.1_g000023 Rmu_sc0009291.1_g000003 Rmu_sc0012046.1_g000001 Rmu_sc0012046.1_g000002 Rmu_sc0012710.1_g000001 Rmu_sc0015238.1_g000001 Rmu_sc0016125.1_g000003 Rmu_sc0016175.1_g000001 Rmu_sc0016898.1_g000001 Rmu_sc0017323.1_g000010 Rmu_sc0017874.1_g000002 Rmu_sc0019167.1_g000001 Rmu_sc0020815.1_g000006 Rmu_sc0025564.1_g000001 Rmu_sc0026418.1_g000001 Rmu_sc0035188.1_g000002 Rmu_sc0039254.1_g000001 Rmu_ssc0000120.1_g000015 Rmu_ssc0000120.1_g000016 Rmu_ssc0000330.1_g000023 Rmu_ssc0000433.1_g000004
rosa_roxburghii Rroxscaffold_1G00047130 Rroxscaffold_1G00051320 Rroxscaffold_1G00056600 Rroxscaffold_2G00109650 Rroxscaffold_2G00119980 Rroxscaffold_3G00222550 Rroxscaffold_3G00224980 Rroxscaffold_3G00251020 Rroxscaffold_6G00411190 Rroxscaffold_7G00166520 Rroxscaffold_7G00172920 Rroxscaffold_7G00191860 Rroxscaffold_7G00194430
rosa_rugosa Rorug01G0198900 Rorug01G0217300 Rorug01G0244500 Rorug02G0147400 Rorug02G0152200 Rorug02G0595500 Rorug02G0595600 Rorug03G0060500 Rorug03G0203000 Rorug03G0285800 Rorug04G0027200 Rorug04G0027300 Rorug04G0225800 Rorug05G0073400 Rorug05G0213300 Rorug05G0324600 Rorug05G0390900 Rorug05G0391000 Rorug05G0391100 Rorug05G0391200 Rorug05G0462900 Rorug05G0473000 Rorug06G0256500 Rorug07G0199000 Rorug07G0208800 Rorug07G0208800 Rorug07G0316600 Rorug07G0316700
rosa_samantha Rh2BG532400 Rh2CG581900 Rh3CG322600 Rh6AG079900 Rh6AG250800 Rh6AG496300 Rh6BG506100 Rh6CG126000 Rh6CG511700 Rh6DG109400 Rh6DG112700 Rh7CG104500 Rh7CG322000 Rh7CG431500
rosa_wichuraiana Rw0G020410 Rw1G009190 Rw1G014580 Rw1G021000 Rw1G022190 Rw2G025900 Rw2G029920 Rw2G037530 Rw3G018560 Rw3G020560 Rw4G008500 Rw4G022520 Rw5G019030 Rw5G031180 Rw5G044830 Rw6G005010 Rw6G006890 Rw6G011330 Rw6G011380 Rw6G023900 Rw7G028490 Rw7G030170 Rw7G030370 Rw7G032030 Rw7G032040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1597
Acc36I ACCTGC 1 cut(s) 393
AciI CCGC 1 cut(s) 564
AclWI GGATC 4 cut(s) 764, 1065, 1078, 1124
AcsI RAATTY 3 cut(s) 499, 533, 794
AcuI CTGAAG 2 cut(s) 1103, 1298
AfaI GTAC 5 cut(s) 5, 67, 314, 824, 1684
AfiI CCNNNNNNNGG 2 cut(s) 62, 325
AflII CTTAAG 1 cut(s) 1220
AflIII ACRYGT 3 cut(s) 450, 945, 1533
AgsI TTSAA 8 cut(s) 206, 352, 368, 538, 571, 635, 799, 834
AjnI CCWGG 2 cut(s) 61, 874
AloI GAACNNNNNNTCC 2 cut(s) 638, 670
AluBI AGCT 9 cut(s) 43, 523, 718, 765, 867, 983, 998, 1117, 1508
AluI AGCT 9 cut(s) 43, 523, 718, 765, 867, 983, 998, 1117, 1508
Alw21I GWGCWC 4 cut(s) 301, 749, 1273, 1510
Alw44I GTGCAC 2 cut(s) 297, 1269
AlwI GGATC 4 cut(s) 764, 1065, 1078, 1124
AlwNI CAGNNNCTG 1 cut(s) 392
AoxI GGCC 3 cut(s) 1038, 1471, 1647
ApaLI GTGCAC 2 cut(s) 297, 1269
ApeKI GCWGC 3 cut(s) 43, 133, 1049
ApoI RAATTY 3 cut(s) 499, 533, 794
AseI ATTAAT 1 cut(s) 903
Asp700I GAANNNNTTC 2 cut(s) 393, 930
AspLEI GCGC 2 cut(s) 598, 1598
AspS9I GGNCC 3 cut(s) 1038, 1446, 1648
AsuC2I CCSGG 1 cut(s) 1563
AsuHPI GGTGA 3 cut(s) 45, 977, 1354
AsuNHI GCTAGC 2 cut(s) 725, 998
AvaII GGWCC 1 cut(s) 1446
BaeGI GKGCMC 2 cut(s) 301, 1273
BamHI GGATCC 1 cut(s) 1070
BanII GRGCYC 2 cut(s) 1219, 1510
BarI GAAGNNNNNNTAC 1 cut(s) 28
BbsI GAAGAC 1 cut(s) 161
Bbv12I GWGCWC 4 cut(s) 301, 749, 1273, 1510
BbvI GCAGC 3 cut(s) 30, 145, 1036
BccI CCATC 5 cut(s) 500, 748, 1259, 1437, 1627
BceAI ACGGC 1 cut(s) 1323
BcgI CGANNNNNNTGC 2 cut(s) 61, 95
BciT130I CCWGG 2 cut(s) 63, 876
BciVI GTATCC 1 cut(s) 672
BcnI CCSGG 1 cut(s) 1563
BfaI CTAG 5 cut(s) 57, 221, 726, 980, 999
BfmI CTRYAG 1 cut(s) 734
BfrI CTTAAG 1 cut(s) 1220
BfuAI ACCTGC 1 cut(s) 393
BfuI GTATCC 1 cut(s) 672
BglI GCCNNNNNGGC 1 cut(s) 1046
BisI GCNGC 3 cut(s) 44, 134, 1050
BlsI GCNGC 3 cut(s) 45, 135, 1051
Bme1390I CCNGG 3 cut(s) 63, 876, 1563
Bme18I GGWCC 1 cut(s) 1446
BmgT120I GGNCC 3 cut(s) 1038, 1446, 1648
BmiI GGNNCC 1 cut(s) 1072
BmrFI CCNGG 3 cut(s) 63, 876, 1563
BmsI GCATC 4 cut(s) 88, 601, 1312, 1651
BmtI GCTAGC 2 cut(s) 729, 1002
BoxI GACNNNNGTC 1 cut(s) 705
BpiI GAAGAC 1 cut(s) 161
BpuEI CTTGAG 1 cut(s) 99
BpuMI CCSGG 1 cut(s) 1563
Bsc4I CCNNNNNNNGG 2 cut(s) 62, 325
Bse1I ACTGG 2 cut(s) 773, 1184
BseBI CCWGG 2 cut(s) 63, 876
BseGI GGATG 6 cut(s) 277, 337, 421, 616, 1392, 1448
BseLI CCNNNNNNNGG 2 cut(s) 62, 325
BseNI ACTGG 2 cut(s) 773, 1184
BseRI GAGGAG 2 cut(s) 281, 323
BseSI GKGCMC 2 cut(s) 301, 1273
BseXI GCAGC 3 cut(s) 30, 145, 1036
BseYI CCCAGC 1 cut(s) 523
BsgI GTGCAG 1 cut(s) 1035
BshFI GGCC 3 cut(s) 1040, 1473, 1649
BsiHKAI GWGCWC 4 cut(s) 301, 749, 1273, 1510
BsiSI CCGG 2 cut(s) 1528, 1563
BslFI GGGAC 2 cut(s) 385, 540
BslI CCNNNNNNNGG 2 cut(s) 62, 325
BsmFI GGGAC 2 cut(s) 385, 540
BsnI GGCC 3 cut(s) 1040, 1473, 1649
Bsp1286I GDGCHC 5 cut(s) 301, 749, 1219, 1273, 1510
Bsp143I GATC 6 cut(s) 769, 844, 1070, 1129, 1414, 1579
BspACI CCGC 1 cut(s) 564
BspANI GGCC 3 cut(s) 1040, 1473, 1649
BspLI GGNNCC 1 cut(s) 1072
BspMAI CTGCAG 1 cut(s) 738
BspMI ACCTGC 1 cut(s) 393
BspOI GCTAGC 2 cut(s) 729, 1002
BspPI GGATC 4 cut(s) 764, 1065, 1078, 1124
BspQI GCTCTTC 1 cut(s) 513
BspTI CTTAAG 1 cut(s) 1220
BsrI ACTGG 2 cut(s) 773, 1184
BssMI GATC 6 cut(s) 769, 844, 1070, 1129, 1414, 1579
Bst2UI CCWGG 2 cut(s) 63, 876
Bst4CI ACNGT 3 cut(s) 412, 432, 707
Bst6I CTCTTC 5 cut(s) 438, 513, 1105, 1274, 1432
BstAFI CTTAAG 1 cut(s) 1220
BstC8I GCNNGC 5 cut(s) 121, 627, 727, 1000, 1594
BstDEI CTNAG 3 cut(s) 605, 984, 1261
BstF5I GGATG 6 cut(s) 277, 337, 421, 616, 1392, 1448
BstHHI GCGC 2 cut(s) 598, 1598
BstKTI GATC 6 cut(s) 772, 847, 1073, 1132, 1417, 1582
BstMBI GATC 6 cut(s) 769, 844, 1070, 1129, 1414, 1579
BstMWI GCNNNNNNNGC 3 cut(s) 1037, 1046, 1133
BstNI CCWGG 2 cut(s) 63, 876
BstNSI RCATGY 4 cut(s) 454, 629, 949, 1537
BstPAI GACNNNNGTC 1 cut(s) 705
BstSCI CCNGG 3 cut(s) 61, 874, 1561
BstSFI CTRYAG 1 cut(s) 734
BstSLI GKGCMC 2 cut(s) 301, 1273
BstV1I GCAGC 3 cut(s) 30, 145, 1036
BstV2I GAAGAC 1 cut(s) 161
BstX2I RGATCY 1 cut(s) 1070
BstXI CCANNNNNNTGG 1 cut(s) 1027
BstYI RGATCY 1 cut(s) 1070
BsuI GTATCC 1 cut(s) 672
BsuRI GGCC 3 cut(s) 1040, 1473, 1649
BtsCI GGATG 6 cut(s) 277, 337, 421, 616, 1392, 1448
BtsI GCAGTG 1 cut(s) 286
BtsIMutI CAGTG 2 cut(s) 286, 437
BveI ACCTGC 1 cut(s) 393
Cac8I GCNNGC 5 cut(s) 121, 627, 727, 1000, 1594
CaiI CAGNNNCTG 1 cut(s) 392
CfoI GCGC 2 cut(s) 598, 1598
Cfr13I GGNCC 3 cut(s) 1038, 1446, 1648
CsiI ACCWGGT 2 cut(s) 61, 874
Csp6I GTAC 5 cut(s) 4, 66, 313, 823, 1683
CspCI CAANNNNNGTGG 2 cut(s) 1126, 1161
CviQI GTAC 5 cut(s) 4, 66, 313, 823, 1683
DdeI CTNAG 3 cut(s) 605, 984, 1261
DpnI GATC 6 cut(s) 771, 846, 1072, 1131, 1416, 1581
DpnII GATC 6 cut(s) 769, 844, 1070, 1129, 1414, 1579
DraI TTTAAA 3 cut(s) 426, 841, 1192
Eam1104I CTCTTC 5 cut(s) 438, 513, 1105, 1274, 1432
EarI CTCTTC 5 cut(s) 438, 513, 1105, 1274, 1432
Ecl136II GAGCTC 1 cut(s) 1508
Eco147I AGGCCT 1 cut(s) 1473
Eco24I GRGCYC 2 cut(s) 1219, 1510
Eco47I GGWCC 1 cut(s) 1446
Eco53kI GAGCTC 1 cut(s) 1508
Eco57I CTGAAG 2 cut(s) 1103, 1298
EcoICRI GAGCTC 1 cut(s) 1508
EcoO109I RGGNCCY 1 cut(s) 1648
EcoRI GAATTC 1 cut(s) 533
EcoRII CCWGG 2 cut(s) 61, 874
EcoT22I ATGCAT 1 cut(s) 1666
EcoT38I GRGCYC 2 cut(s) 1219, 1510
FalI AAGNNNNNCTT 6 cut(s) 918, 950, 1214, 1246, 1271, 1303
FaqI GGGAC 2 cut(s) 385, 540
FauI CCCGC 1 cut(s) 571
FauNDI CATATG 1 cut(s) 1351
Fnu4HI GCNGC 3 cut(s) 44, 134, 1050
FokI GGATG 6 cut(s) 284, 344, 428, 623, 1399, 1455
FriOI GRGCYC 2 cut(s) 1219, 1510
Fsp4HI GCNGC 3 cut(s) 44, 134, 1050
FspBI CTAG 5 cut(s) 57, 221, 726, 980, 999
FspI TGCGCA 1 cut(s) 1597
GlaI GCGC 2 cut(s) 597, 1597
GluI GCNGC 3 cut(s) 44, 134, 1050
GsaI CCCAGC 1 cut(s) 527
HaeIII GGCC 3 cut(s) 1040, 1473, 1649
HapII CCGG 2 cut(s) 1528, 1563
HhaI GCGC 2 cut(s) 598, 1598
Hin6I GCGC 2 cut(s) 596, 1596
HinP1I GCGC 2 cut(s) 596, 1596
HincII GTYRAC 2 cut(s) 408, 1305
HindII GTYRAC 2 cut(s) 408, 1305
HinfI GANTC 8 cut(s) 50, 78, 389, 467, 528, 601, 974, 1379
HpaII CCGG 2 cut(s) 1528, 1563
HphI GGTGA 3 cut(s) 45, 977, 1354
Hpy166II GTNNAC 6 cut(s) 299, 408, 778, 1271, 1305, 1539
Hpy188III TCNNGA 4 cut(s) 82, 173, 221, 923
Hpy8I GTNNAC 6 cut(s) 299, 408, 778, 1271, 1305, 1539
HpyAV CCTTC 8 cut(s) 20, 152, 362, 1061, 1427, 1459, 1621, 1639
HpyCH4III ACNGT 3 cut(s) 412, 432, 707
HpyCH4IV ACGT 2 cut(s) 514, 821
HpyF10VI GCNNNNNNNGC 3 cut(s) 1037, 1046, 1133
HpyF3I CTNAG 3 cut(s) 605, 984, 1261
HpySE526I ACGT 2 cut(s) 514, 821
HspAI GCGC 2 cut(s) 596, 1596
Kzo9I GATC 6 cut(s) 769, 844, 1070, 1129, 1414, 1579
LguI GCTCTTC 1 cut(s) 513
LmnI GCTCC 1 cut(s) 622
Lsp1109I GCAGC 3 cut(s) 30, 145, 1036
LweI GCATC 4 cut(s) 88, 601, 1312, 1651
MabI ACCWGGT 2 cut(s) 61, 874
MaeI CTAG 5 cut(s) 57, 221, 726, 980, 999
MaeII ACGT 2 cut(s) 514, 821
MaeIII GTNAC 1 cut(s) 941
MalI GATC 6 cut(s) 771, 846, 1072, 1131, 1416, 1581
MboI GATC 6 cut(s) 769, 844, 1070, 1129, 1414, 1579
MfeI CAATTG 2 cut(s) 1143, 1298
MflI RGATCY 1 cut(s) 1070
MhlI GDGCHC 5 cut(s) 301, 749, 1219, 1273, 1510
MluCI AATT 6 cut(s) 499, 533, 794, 1143, 1298, 1485
MlyI GAGTC 1 cut(s) 522
MmeI TCCRAC 1 cut(s) 11
Mph1103I ATGCAT 1 cut(s) 1666
MroXI GAANNNNTTC 2 cut(s) 393, 930
MslI CAYNNNNRTG 3 cut(s) 752, 1387, 1669
MspCI CTTAAG 1 cut(s) 1220
MspI CCGG 2 cut(s) 1528, 1563
MspR9I CCNGG 3 cut(s) 63, 876, 1563
MunI CAATTG 2 cut(s) 1143, 1298
MvaI CCWGG 2 cut(s) 63, 876
MwoI GCNNNNNNNGC 3 cut(s) 1037, 1046, 1133
NciI CCSGG 1 cut(s) 1563
NdeI CATATG 1 cut(s) 1351
NdeII GATC 6 cut(s) 769, 844, 1070, 1129, 1414, 1579
NheI GCTAGC 2 cut(s) 725, 998
NlaIV GGNNCC 1 cut(s) 1072
NsbI TGCGCA 1 cut(s) 1597
NsiI ATGCAT 1 cut(s) 1666
NspI RCATGY 4 cut(s) 454, 629, 949, 1537
PaeI GCATGC 1 cut(s) 629
PceI AGGCCT 1 cut(s) 1473
PciI ACATGT 3 cut(s) 450, 945, 1533
PciSI GCTCTTC 1 cut(s) 513
PdmI GAANNNNTTC 2 cut(s) 393, 930
PfeI GAWTC 7 cut(s) 50, 78, 389, 467, 601, 974, 1379
PflFI GACNNNGTC 1 cut(s) 991
PfoI TCCNGGA 1 cut(s) 1561
PkrI GCNGC 3 cut(s) 45, 135, 1051
PleI GAGTC 1 cut(s) 522
PpsI GAGTC 1 cut(s) 522
PscI ACATGT 3 cut(s) 450, 945, 1533
PshAI GACNNNNGTC 1 cut(s) 705
PshBI ATTAAT 1 cut(s) 903
Psp124BI GAGCTC 1 cut(s) 1510
Psp6I CCWGG 2 cut(s) 61, 874
PspFI CCCAGC 1 cut(s) 523
PspGI CCWGG 2 cut(s) 61, 874
PspN4I GGNNCC 1 cut(s) 1072
PspPI GGNCC 3 cut(s) 1038, 1446, 1648
PstI CTGCAG 1 cut(s) 738
PstNI CAGNNNCTG 1 cut(s) 392
PsuI RGATCY 1 cut(s) 1070
PsyI GACNNNGTC 1 cut(s) 991
RsaI GTAC 5 cut(s) 5, 67, 314, 824, 1684
RsaNI GTAC 5 cut(s) 4, 66, 313, 823, 1683
RseI CAYNNNNRTG 3 cut(s) 752, 1387, 1669
SacI GAGCTC 1 cut(s) 1510
SapI GCTCTTC 1 cut(s) 513
SatI GCNGC 3 cut(s) 44, 134, 1050
Sau3AI GATC 6 cut(s) 769, 844, 1070, 1129, 1414, 1579
Sau96I GGNCC 3 cut(s) 1038, 1446, 1648
SchI GAGTC 1 cut(s) 522
ScrFI CCNGG 3 cut(s) 63, 876, 1563
SduI GDGCHC 5 cut(s) 301, 749, 1219, 1273, 1510
SexAI ACCWGGT 2 cut(s) 61, 874
SfaNI GCATC 4 cut(s) 88, 601, 1312, 1651
SfcI CTRYAG 1 cut(s) 734
SinI GGWCC 1 cut(s) 1446
SmiMI CAYNNNNRTG 3 cut(s) 752, 1387, 1669
SmlI CTYRAG 2 cut(s) 114, 1220
SmoI CTYRAG 2 cut(s) 114, 1220
SphI GCATGC 1 cut(s) 629
Sse9I AATT 6 cut(s) 499, 533, 794, 1143, 1298, 1485
SseBI AGGCCT 1 cut(s) 1473
SsiI CCGC 1 cut(s) 564
SspMI CTAG 5 cut(s) 57, 221, 726, 980, 999
SstI GAGCTC 1 cut(s) 1510
StuI AGGCCT 1 cut(s) 1473
StyD4I CCNGG 3 cut(s) 61, 874, 1561
TaaI ACNGT 3 cut(s) 412, 432, 707
TaiI ACGT 2 cut(s) 517, 824
TaqI TCGA 1 cut(s) 531
TasI AATT 6 cut(s) 499, 533, 794, 1143, 1298, 1485
TfiI GAWTC 7 cut(s) 50, 78, 389, 467, 601, 974, 1379
TscAI CASTG 2 cut(s) 286, 437
TseI GCWGC 3 cut(s) 43, 133, 1049
TspRI CASTG 2 cut(s) 286, 437
Tth111I GACNNNGTC 1 cut(s) 991
Vha464I CTTAAG 1 cut(s) 1220
VneI GTGCAC 2 cut(s) 297, 1269
VpaK11BI GGWCC 1 cut(s) 1446
VspI ATTAAT 1 cut(s) 903
XapI RAATTY 3 cut(s) 499, 533, 794
XbaI TCTAGA 1 cut(s) 220
XceI RCATGY 4 cut(s) 454, 629, 949, 1537
XmnI GAANNNNTTC 2 cut(s) 393, 930
XspI CTAG 5 cut(s) 57, 221, 726, 980, 999
Zsp2I ATGCAT 1 cut(s) 1666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.