Rorug03G0060500

Protein FAR1-RELATED SEQUENCE 5-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
4512282 .. 4517734
5453 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0060500.1

Sequence Viewer

Length: 2805 bp
ATGGAACGTGGCAAATATCCAGAAGCAGTCCTGAAACTCCTCAGAATTATGAATATTTGTCCCACTTTACATTCCCCCCCCTATAAATACCCCAAGCCCCTCTTTCACTCTTTCCAAACCAAACCAACTTTCAATCAAAGTTCTCATATAAACTACTTTTTCATACATAAACATATTATTTGCTTTCTTCTTTGGAATCCAGCAAGCTTACTCAAGATGTTGCATAACTTGCTTGGTGCAATCACAGGCCATAATAATGGCGGTAGTACGAAACAGATCACAGGGACTGTGGTGCTGATGAAGAAGAATGTGTTGGATTTCAATGACTTCAATGCTTCTGTTCTCGATGGCGTGCATGAATTGTTGGGCCAAAGGGTTTCTCTGCAGCTCATCAGTGCTGTCAATGCCGATTCTGAGAATGGATTGAAAGGGAAACTTGGAAAGCCTGCATATTTGGAAGACTGGATCACCACAATCACTCCTTTAACAGCAGGAGATTCTGCATACAAGGTTACCTTTGACTGGGAAGATGAAATCGGAGTTCCAGGAGCAATCCTAATAAAAAACAATCACCACAGTCAGTTCTACCTTAAGACCATCACACTCGAAGATGTTCCTGGTGAGGGTACAGTTCACTTTGTTTGTAACTCATGGGTGTACCCTGTAGAAAAATACACGAAAGACCGCGTTTTCTTTGTTAACAAGACTTATCTTCCAAGTGAAACACCATTGCCACTACAGAAGTACAGAGAAGACGAACTAGTACACTTGAGAGGAGATGGGAAAGGAGAGCTCCAGGAGTATGACAGGGTCTATGATTATGCTTACTACAATGATCTGGGAAATCCAGACAAGGGTCCGGATTATGCCCGTCCAACTCTGGGAGGGTCTAGTGAGTACCCTTACCCTCGAAGAGGAAGAACTGGCCGTGCACCAACCGAGTCAGATCCTAGCAGTGAGAGTAGGATCCCTCTTCTCATGAGCTTAGACATTTATGTTCCAAGAGACGAACGATTTGGACACTTGAAGATGTCTGATTTCCTTGCTTATGCACTGAAATCCATAGCTCAATTCATCAGACCTGAGCTAGAAGCTGTATTTGATAAGACTCCTAACGAGTTTGACAGCTTCGAAGATGTACTTAAACTTTATGAAGGAGGAATTCCATTGCCTGAAGGTTTCTTAAAGGACATTGGGGATAACATCCCTCTAGAGATGATCAAGGAAATTTTCCGAACTGACGGTGCAGAGTTGCTCAGGTTCCCAACGCCTGAAGTGATCAAAAAAAATAGGTTGGCTTGGAGGACAGATGAAGAATTTGCCAGAGAAATGCTAGCTGGAGTGAACCCTGTCAACATTAGTCTCCTCCAAACATTTCCGCCAGCAAGCACCCTAGACCCAAAAGTTTATGGTGATCAATCCAGTAAAATAACAGAAGAACACATCAAGAATAACTTGGATGGACTGACAGTGGAGGAGGCACTCAAGAGCAACAAGCTATTCCTATTAGACCACCATGATGCATTGATGCCATACGTGAGGCGTATAAACTCAAATACTTCCTCAAAGATCTATGCTAGCAGGACACTGCTTTTCTTGAAAAGTGATGGAACTTTGAAGCCATTGGTGATTGAACTAAGCTTGCCTCATCCTGATGGAGATCAACTCGGTCGCATTAGCAGTGTATTCACACCAGCTGAGGAGGGTGTAGAAAGCTCCATATGGCATCTGGCCAAAGCTTATGTTGCTGTAAATGACTCTGGAGTTCATCAACTTATCAGTCACTGGTTGAATACTCATGCTGTGTGTGAGCCAGTAGTAATAGCAACAAACAGGCAACTGAGTGTGGTTCACCCGATATACAAGCTTCTTCATCCTCACTTCGGCGACACCATGAACATAAATGCACTAGCCAGGCAAATCCTCATCAATGCTGGTGGCATTCTGGAGACGACAGTGTTTCCAGCTAGGTATGCCATGGAGATGTCATCAGTTGTTTACAAGAATTGGGTTTTCCCTGAGCAAGCTCTCCCTGCAGATCTTATCAAGAGAGGAATGGCAGTCAAGGATGAGAGTTCCCCACATGGTCTACGCCTACTGATACAGGACTACCCCTATGGTGTTGATGGGATCGAAATCTGGTTTGCGATAAGAAATTGGGTTGAAGACTATTGCTCATTCTACTACAAGACTGATGACATTGTTCAAAAAGACACAGAACTCCAATCCTGGTGGAAGGAACTAGTAGAGGAGGGTCATGGTGACAAAAAAGATGAGCCCTGGTGGCCTAAAATGCAGACTTGTGAAGAGCTAATCGAAACTTGCACTATCATCATATGGACTTCTTCTGCTCTCCATGCAGCTGTCAACTTTGGACAGTTCCCTTATGCAGGCTACCTCCCATGCCGCCCCACTGCAAGCCGAAGATTCATGCCTGAAAAGGGAACTCCTGAGTATGATGAGCTTGAGTCCAACCCTGATAAGGCCTTCTTGAAAACAATCACTGCTCAATTCCAGACAGTGCTTGGCATAGCCCTCATTGAAATTCTGTCAAGGCATTCTACTGATGAAGTGTATTTGGGCCAGAGGGACACTCCTAACTGGACATCAGACGCAAAAGCATTGGAAGCTTTTGATAGATTTGGAAAGAAACTTGCTGAAATCGAAGAGAAAATTACAAACTTGAACAATGATGAGAATCTCAAGAATAGGGTTGGAAAGGTGGAGGTGCCTTACACTTTGCTGTATCCCACTGGTGAAAGTGGAATTGCTGGCAAGGGAATTCCCAACAGTGTCTCAATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

934

Amino Acids

105.71

Weight (kDa)

5.59

Isoelectric Point (pI)

43.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 128 - 232 1.9e-23 PLAT/LH2 domain
Lipoxygenase PF00305 245 - 917 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000164)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02320 FvH4_1g21472 FvH4_2g00813 FvH4_2g02512 FvH4_2g03921 FvH4_2g23460 FvH4_3g29141 FvH4_4g05791 FvH4_4g06321 FvH4_4g15595 FvH4_4g18162 FvH4_4g18163 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_5g31093 FvH4_6g01982 FvH4_6g21931 FvH4_6g44691 FvH4_6g48541
prunus_persica Prupe.1G074100_v2.0.a1 Prupe.3G021400_v2.0.a1
pyrus_communis pycom02g18570 pycom14g00670
rosa_chinensis RchiOBHm_Chr1g0379201 RchiOBHm_Chr1g0379361 RchiOBHm_Chr4g0405981 RchiOBHm_Chr5g0073641 RchiOBHm_Chr5g0073651 RchiOBHm_Chr7g0236661
rosa_multiflora Rmu_co8179562.1_g000001 Rmu_co8343647.1_g000001 Rmu_sc0000041.1_g000017 Rmu_sc0000114.1_g000020 Rmu_sc0000286.1_g000006 Rmu_sc0000308.1_g000038 Rmu_sc0000365.1_g000061 Rmu_sc0000365.1_g000062 Rmu_sc0000538.1_g000060 Rmu_sc0000538.1_g000061 Rmu_sc0000586.1_g000016 Rmu_sc0000898.1_g000007 Rmu_sc0000913.1_g000003 Rmu_sc0000913.1_g000004 Rmu_sc0000996.1_g000006 Rmu_sc0000996.1_g000007 Rmu_sc0000998.1_g000003 Rmu_sc0001350.1_g000009 Rmu_sc0002079.1_g000009 Rmu_sc0002200.1_g000013 Rmu_sc0002226.1_g000025 Rmu_sc0002279.1_g000014 Rmu_sc0002478.1_g000014 Rmu_sc0002717.1_g000004 Rmu_sc0002868.1_g000027 Rmu_sc0002889.1_g000043 Rmu_sc0003023.1_g000001 Rmu_sc0003110.1_g000006 Rmu_sc0003226.1_g000028 Rmu_sc0003226.1_g000029 Rmu_sc0003337.1_g000053 Rmu_sc0003558.1_g000007 Rmu_sc0004345.1_g000014 Rmu_sc0004383.1_g000007 Rmu_sc0004888.1_g000021 Rmu_sc0005114.1_g000012 Rmu_sc0005223.1_g000019 Rmu_sc0005223.1_g000020 Rmu_sc0005639.1_g000025 Rmu_sc0005685.1_g000027 Rmu_sc0005992.1_g000002 Rmu_sc0006326.1_g000034 Rmu_sc0006326.1_g000035 Rmu_sc0007390.1_g000012 Rmu_sc0007451.1_g000006 Rmu_sc0007825.1_g000003 Rmu_sc0008600.1_g000023 Rmu_sc0009291.1_g000003 Rmu_sc0012046.1_g000001 Rmu_sc0012046.1_g000002 Rmu_sc0012710.1_g000001 Rmu_sc0015238.1_g000001 Rmu_sc0016125.1_g000003 Rmu_sc0016175.1_g000001 Rmu_sc0016898.1_g000001 Rmu_sc0017323.1_g000010 Rmu_sc0017874.1_g000002 Rmu_sc0019167.1_g000001 Rmu_sc0020815.1_g000006 Rmu_sc0025564.1_g000001 Rmu_sc0026418.1_g000001 Rmu_sc0035188.1_g000002 Rmu_sc0039254.1_g000001 Rmu_ssc0000120.1_g000015 Rmu_ssc0000120.1_g000016 Rmu_ssc0000330.1_g000023 Rmu_ssc0000433.1_g000004
rosa_roxburghii Rroxscaffold_1G00047130 Rroxscaffold_1G00051320 Rroxscaffold_1G00056600 Rroxscaffold_2G00109650 Rroxscaffold_2G00119980 Rroxscaffold_3G00222550 Rroxscaffold_3G00224980 Rroxscaffold_3G00251020 Rroxscaffold_6G00411190 Rroxscaffold_7G00166520 Rroxscaffold_7G00172920 Rroxscaffold_7G00191860 Rroxscaffold_7G00194430
rosa_rugosa Rorug01G0198900 Rorug01G0217300 Rorug01G0244500 Rorug02G0147400 Rorug02G0152200 Rorug02G0595500 Rorug02G0595600 Rorug03G0060500 Rorug03G0203000 Rorug03G0285800 Rorug04G0027200 Rorug04G0027300 Rorug04G0225800 Rorug05G0073400 Rorug05G0213300 Rorug05G0324600 Rorug05G0390900 Rorug05G0391000 Rorug05G0391100 Rorug05G0391200 Rorug05G0462900 Rorug05G0473000 Rorug06G0256500 Rorug07G0199000 Rorug07G0208800 Rorug07G0208800 Rorug07G0316600 Rorug07G0316700
rosa_samantha Rh2BG532400 Rh2CG581900 Rh3CG322600 Rh6AG079900 Rh6AG250800 Rh6AG496300 Rh6BG506100 Rh6CG126000 Rh6CG511700 Rh6DG109400 Rh6DG112700 Rh7CG104500 Rh7CG322000 Rh7CG431500
rosa_wichuraiana Rw0G020410 Rw1G009190 Rw1G014580 Rw1G021000 Rw1G022190 Rw2G025900 Rw2G029920 Rw2G037530 Rw3G018560 Rw3G020560 Rw4G008500 Rw4G022520 Rw5G019030 Rw5G031180 Rw5G044830 Rw6G005010 Rw6G006890 Rw6G011330 Rw6G011380 Rw6G023900 Rw7G028490 Rw7G030170 Rw7G030370 Rw7G032030 Rw7G032040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2728
AccI GTMKAC 1 cut(s) 2089
AccII CGCG 1 cut(s) 687
AccIII TCCGGA 1 cut(s) 859
AciI CCGC 4 cut(s) 261, 685, 1379, 2407
AclWI GGATC 5 cut(s) 473, 941, 961, 974, 2138
AcoI YGGCCR 2 cut(s) 925, 1731
AcsI RAATTY 5 cut(s) 1161, 1227, 1316, 2544, 2781
AcuI CTGAAG 2 cut(s) 1194, 1293
AfaI GTAC 7 cut(s) 268, 628, 659, 746, 765, 899, 1140
AfiI CCNNNNNNNGG 9 cut(s) 522, 623, 854, 881, 914, 1883, 2390, 2441, 2482
AflII CTTAAG 1 cut(s) 590
AhlI ACTAGT 2 cut(s) 760, 2242
AjnI CCWGG 6 cut(s) 544, 616, 795, 1913, 2228, 2279
AjuI GAANNNNNNNTTGG 4 cut(s) 113, 145, 296, 328
Alw21I GWGCWC 2 cut(s) 795, 934
Alw26I GTCTC 4 cut(s) 999, 1367, 1943, 2800
Alw44I GTGCAC 1 cut(s) 930
AlwI GGATC 5 cut(s) 473, 941, 961, 974, 2138
AlwNI CAGNNNCTG 2 cut(s) 287, 1785
Aor13HI TCCGGA 1 cut(s) 859
AoxI GGCC 7 cut(s) 247, 367, 925, 1731, 2285, 2484, 2581
ApaLI GTGCAC 1 cut(s) 930
ApeKI GCWGC 2 cut(s) 385, 2360
ApoI RAATTY 5 cut(s) 1161, 1227, 1316, 2544, 2781
ArsI GACNNNNNNTTYG 2 cut(s) 998, 1030
Asp700I GAANNNNTTC 1 cut(s) 612
AspS9I GGNCC 3 cut(s) 367, 857, 2581
AsuHPI GGTGA 8 cut(s) 460, 563, 632, 1424, 1639, 1844, 2273, 2768
AsuII TTCGAA 1 cut(s) 1131
AsuNHI GCTAGC 2 cut(s) 1333, 1577
AvaII GGWCC 1 cut(s) 857
BaeGI GKGCMC 1 cut(s) 934
BalI TGGCCA 1 cut(s) 1733
BamHI GGATCC 1 cut(s) 966
BanI GGYRCC 1 cut(s) 2728
BanII GRGCYC 2 cut(s) 795, 2280
BbsI GAAGAC 3 cut(s) 465, 759, 2172
Bbv12I GWGCWC 2 cut(s) 795, 934
BbvCI CCTCAGC 1 cut(s) 1698
BbvI GCAGC 2 cut(s) 397, 2372
BccI CCATC 7 cut(s) 341, 605, 773, 1454, 1601, 1649, 2120
BceAI ACGGC 1 cut(s) 912
BciT130I CCWGG 6 cut(s) 546, 618, 797, 1915, 2230, 2281
BciVI GTATCC 1 cut(s) 2757
BclI TGATCA 3 cut(s) 1218, 1278, 1414
BcoDI GTCTC 4 cut(s) 999, 1367, 1943, 2800
BcuI ACTAGT 2 cut(s) 760, 2242
BfmI CTRYAG 4 cut(s) 383, 663, 737, 2034
BfrI CTTAAG 1 cut(s) 590
BfuI GTATCC 1 cut(s) 2757
BglI GCCNNNNNGGC 1 cut(s) 2284
BglII AGATCT 2 cut(s) 1569, 2038
BisI GCNGC 3 cut(s) 386, 2361, 2407
BlsI GCNGC 3 cut(s) 387, 2362, 2408
Bme1390I CCNGG 6 cut(s) 546, 618, 797, 1915, 2230, 2281
Bme18I GGWCC 1 cut(s) 857
BmgT120I GGNCC 3 cut(s) 367, 857, 2581
BmiI GGNNCC 4 cut(s) 858, 968, 1262, 2730
BmrFI CCNGG 6 cut(s) 546, 618, 797, 1915, 2230, 2281
BmrI ACTGGG 1 cut(s) 532
BmsI GCATC 3 cut(s) 1510, 1518, 1735
BmtI GCTAGC 2 cut(s) 1337, 1581
BmuI ACTGGG 1 cut(s) 532
BoxI GACNNNNGTC 1 cut(s) 855
BpiI GAAGAC 3 cut(s) 465, 759, 2172
BplI GAGNNNNNCTC 4 cut(s) 1650, 1682, 2578, 2610
BpmI CTGGAG 4 cut(s) 779, 1359, 1782, 1967
Bpu10I CCTNAGC 4 cut(s) 1083, 1256, 1698, 2019
Bpu14I TTCGAA 1 cut(s) 1131
BpuEI CTTGAG 5 cut(s) 197, 790, 1469, 2486, 2687
BsaAI YACGTR 1 cut(s) 1537
BsaBI GATNNNNATC 3 cut(s) 1659, 2135, 2697
BsaJI CCNNGG 2 cut(s) 1977, 2279
BsaWI WCCGGW 1 cut(s) 859
BsaXI ACNNNNNCTCC 2 cut(s) 463, 493
Bsc4I CCNNNNNNNGG 9 cut(s) 522, 623, 854, 881, 914, 1883, 2390, 2441, 2482
Bse1I ACTGG 8 cut(s) 467, 527, 928, 1422, 1790, 1814, 2606, 2758
Bse3DI GCAATG 2 cut(s) 728, 1166
Bse8I GATNNNNATC 3 cut(s) 1659, 2135, 2697
BseAI TCCGGA 1 cut(s) 859
BseBI CCWGG 6 cut(s) 546, 618, 797, 1915, 2230, 2281
BseDI CCNNGG 2 cut(s) 1977, 2279
BseGI GGATG 5 cut(s) 1203, 1465, 1648, 1873, 2074
BseJI GATNNNNATC 3 cut(s) 1659, 2135, 2697
BseLI CCNNNNNNNGG 9 cut(s) 522, 623, 854, 881, 914, 1883, 2390, 2441, 2482
BseMI GCAATG 2 cut(s) 728, 1166
BseMII CTCAG 8 cut(s) 55, 405, 1074, 1270, 1689, 1832, 2010, 2442
BseNI ACTGG 8 cut(s) 467, 527, 928, 1422, 1790, 1814, 2606, 2758
BseRI GAGGAG 6 cut(s) 29, 789, 1355, 1490, 1715, 2264
BseSI GKGCMC 1 cut(s) 934
BseXI GCAGC 2 cut(s) 397, 2372
BsgI GTGCAG 1 cut(s) 1266
Bsh1236I CGCG 1 cut(s) 687
Bsh1285I CGRYCG 1 cut(s) 1672
BshFI GGCC 7 cut(s) 249, 369, 927, 1733, 2287, 2486, 2583
BshNI GGYRCC 1 cut(s) 2728
BsiEI CGRYCG 1 cut(s) 1672
BsiHKAI GWGCWC 2 cut(s) 795, 934
BsiSI CCGG 1 cut(s) 860
BslFI GGGAC 3 cut(s) 45, 298, 2603
BslI CCNNNNNNNGG 9 cut(s) 522, 623, 854, 881, 914, 1883, 2390, 2441, 2482
BsmAI GTCTC 4 cut(s) 999, 1367, 1943, 2800
BsmBI CGTCTC 2 cut(s) 999, 1943
BsmFI GGGAC 3 cut(s) 45, 298, 2603
BsmI GAATGC 2 cut(s) 1941, 2557
BsnI GGCC 7 cut(s) 249, 369, 927, 1733, 2287, 2486, 2583
Bsp119I TTCGAA 1 cut(s) 1131
Bsp1286I GDGCHC 3 cut(s) 795, 934, 2280
Bsp13I TCCGGA 1 cut(s) 859
Bsp19I CCATGG 1 cut(s) 1977
BspACI CCGC 4 cut(s) 261, 685, 1379, 2407
BspANI GGCC 7 cut(s) 249, 369, 927, 1733, 2287, 2486, 2583
BspCNI CTCAG 8 cut(s) 54, 406, 1075, 1269, 1690, 1833, 2011, 2443
BspEI TCCGGA 1 cut(s) 859
BspFNI CGCG 1 cut(s) 687
BspHI TCATGA 1 cut(s) 978
BspLI GGNNCC 4 cut(s) 858, 968, 1262, 2730
BspMAI CTGCAG 2 cut(s) 387, 2038
BspOI GCTAGC 2 cut(s) 1337, 1581
BspPI GGATC 5 cut(s) 473, 941, 961, 974, 2138
BspQI GCTCTTC 1 cut(s) 2301
BspT104I TTCGAA 1 cut(s) 1131
BspT107I GGYRCC 1 cut(s) 2728
BspTI CTTAAG 1 cut(s) 590
BsrDI GCAATG 2 cut(s) 728, 1166
BsrI ACTGG 8 cut(s) 467, 527, 928, 1422, 1790, 1814, 2606, 2758
BssECI CCNNGG 2 cut(s) 1977, 2279
BssT1I CCWWGG 1 cut(s) 1977
Bst2UI CCWGG 6 cut(s) 546, 618, 797, 1915, 2230, 2281
Bst4CI ACNGT 9 cut(s) 289, 578, 631, 1244, 1471, 1957, 2379, 2521, 2792
Bst6I CTCTTC 4 cut(s) 907, 978, 2301, 2661
BstAFI CTTAAG 1 cut(s) 590
BstAPI GCANNNNNTGC 1 cut(s) 229
BstBAI YACGTR 1 cut(s) 1537
BstBI TTCGAA 1 cut(s) 1131
BstDSI CCRYGG 1 cut(s) 1977
BstEII GGTNACC 1 cut(s) 511
BstENI CCTNNNNNAGG 2 cut(s) 912, 2388
BstF5I GGATG 5 cut(s) 1203, 1465, 1648, 1873, 2074
BstFNI CGCG 1 cut(s) 687
BstMAI GTCTC 4 cut(s) 999, 1367, 1943, 2800
BstMCI CGRYCG 1 cut(s) 1672
BstMWI GCNNNNNNNGC 9 cut(s) 229, 404, 1745, 1973, 2033, 2284, 2293, 2357, 2627
BstNI CCWGG 6 cut(s) 546, 618, 797, 1915, 2230, 2281
BstPAI GACNNNNGTC 1 cut(s) 855
BstPI GGTNACC 1 cut(s) 511
BstSCI CCNGG 6 cut(s) 544, 616, 795, 1913, 2228, 2279
BstSFI CTRYAG 4 cut(s) 383, 663, 737, 2034
BstSLI GKGCMC 1 cut(s) 934
BstUI CGCG 1 cut(s) 687
BstV1I GCAGC 2 cut(s) 397, 2372
BstV2I GAAGAC 3 cut(s) 465, 759, 2172
BstX2I RGATCY 4 cut(s) 946, 966, 1569, 2038
BstXI CCANNNNNNTGG 1 cut(s) 257
BstYI RGATCY 4 cut(s) 946, 966, 1569, 2038
BsuI GTATCC 1 cut(s) 2757
BsuRI GGCC 7 cut(s) 249, 369, 927, 1733, 2287, 2486, 2583
BtgI CCRYGG 1 cut(s) 1977
BtsCI GGATG 5 cut(s) 1203, 1465, 1648, 1873, 2074
BtsI GCAGTG 5 cut(s) 961, 1586, 1687, 2412, 2502
CaiI CAGNNNCTG 2 cut(s) 287, 1785
CciI TCATGA 1 cut(s) 978
Cfr13I GGNCC 3 cut(s) 367, 857, 2581
CseI GACGC 1 cut(s) 2621
Csp6I GTAC 7 cut(s) 267, 627, 658, 745, 764, 898, 1139
CspCI CAANNNNNGTGG 4 cut(s) 1918, 1953, 2213, 2248
CviQI GTAC 7 cut(s) 267, 627, 658, 745, 764, 898, 1139
EaeI YGGCCR 2 cut(s) 925, 1731
Eam1104I CTCTTC 4 cut(s) 907, 978, 2301, 2661
EarI CTCTTC 4 cut(s) 907, 978, 2301, 2661
EciI GGCGGA 1 cut(s) 1368
Ecl136II GAGCTC 1 cut(s) 793
Eco130I CCWWGG 1 cut(s) 1977
Eco147I AGGCCT 1 cut(s) 2486
Eco24I GRGCYC 2 cut(s) 795, 2280
Eco47I GGWCC 1 cut(s) 857
Eco53kI GAGCTC 1 cut(s) 793
Eco57I CTGAAG 2 cut(s) 1194, 1293
Eco91I GGTNACC 1 cut(s) 511
EcoICRI GAGCTC 1 cut(s) 793
EcoNI CCTNNNNNAGG 2 cut(s) 912, 2388
EcoO65I GGTNACC 1 cut(s) 511
EcoRI GAATTC 2 cut(s) 1161, 2781
EcoRII CCWGG 6 cut(s) 544, 616, 795, 1913, 2228, 2279
EcoT14I CCWWGG 1 cut(s) 1977
EcoT22I ATGCAT 1 cut(s) 1525
EcoT38I GRGCYC 2 cut(s) 795, 2280
ErhI CCWWGG 1 cut(s) 1977
Esp3I CGTCTC 2 cut(s) 999, 1943
FaqI GGGAC 3 cut(s) 45, 298, 2603
FauNDI CATATG 2 cut(s) 1721, 2336
FbaI TGATCA 3 cut(s) 1218, 1278, 1414
FblI GTMKAC 1 cut(s) 2089
Fnu4HI GCNGC 3 cut(s) 386, 2361, 2407
FokI GGATG 5 cut(s) 1190, 1472, 1635, 1860, 2081
FriOI GRGCYC 2 cut(s) 795, 2280
Fsp4HI GCNGC 3 cut(s) 386, 2361, 2407
GluI GCNGC 3 cut(s) 386, 2361, 2407
GsuI CTGGAG 4 cut(s) 779, 1359, 1782, 1967
HaeIII GGCC 7 cut(s) 249, 369, 927, 1733, 2287, 2486, 2583
HapII CCGG 1 cut(s) 860
HgaI GACGC 1 cut(s) 2621
HincII GTYRAC 3 cut(s) 700, 1354, 2368
HindII GTYRAC 3 cut(s) 700, 1354, 2368
HindIII AAGCTT 5 cut(s) 205, 1639, 1737, 1865, 2628
HinfI GANTC 9 cut(s) 196, 410, 497, 941, 1108, 1757, 2427, 2468, 2698
HpaI GTTAAC 1 cut(s) 700
HpaII CCGG 1 cut(s) 860
HphI GGTGA 8 cut(s) 460, 563, 632, 1424, 1639, 1844, 2273, 2768
Hpy188I TCNGA 8 cut(s) 44, 415, 539, 946, 1036, 1079, 1235, 2611
HpyAV CCTTC 4 cut(s) 1148, 1169, 2230, 2497
HpyCH4III ACNGT 9 cut(s) 289, 578, 631, 1244, 1471, 1957, 2379, 2521, 2792
HpyCH4IV ACGT 2 cut(s) 7, 1536
HpyF10VI GCNNNNNNNGC 9 cut(s) 229, 404, 1745, 1973, 2033, 2284, 2293, 2357, 2627
HpySE526I ACGT 2 cut(s) 7, 1536
Kpn2I TCCGGA 1 cut(s) 859
Ksp22I TGATCA 3 cut(s) 1218, 1278, 1414
KspAI GTTAAC 1 cut(s) 700
LguI GCTCTTC 1 cut(s) 2301
LmnI GCTCC 3 cut(s) 548, 798, 1721
Lsp1109I GCAGC 2 cut(s) 397, 2372
LweI GCATC 3 cut(s) 1510, 1518, 1735
MaeII ACGT 2 cut(s) 7, 1536
MaeIII GTNAC 4 cut(s) 511, 644, 1781, 2261
MflI RGATCY 4 cut(s) 946, 966, 1569, 2038
MhlI GDGCHC 3 cut(s) 795, 934, 2280
MlsI TGGCCA 1 cut(s) 1733
MluNI TGGCCA 1 cut(s) 1733
MlyI GAGTC 4 cut(s) 950, 1102, 1751, 2477
MmeI TCCRAC 4 cut(s) 294, 899, 2496, 2695
Mox20I TGGCCA 1 cut(s) 1733
Mph1103I ATGCAT 1 cut(s) 1525
MroI TCCGGA 1 cut(s) 859
MroXI GAANNNNTTC 1 cut(s) 612
MscI TGGCCA 1 cut(s) 1733
MseI TTAA 5 cut(s) 485, 591, 699, 1143, 1184
MslI CAYNNNNRTG 4 cut(s) 255, 1518, 1653, 1982
Msp20I TGGCCA 1 cut(s) 1733
MspA1I CMGCKG 2 cut(s) 1697, 2363
MspCI CTTAAG 1 cut(s) 590
MspI CCGG 1 cut(s) 860
MspR9I CCNGG 6 cut(s) 546, 618, 797, 1915, 2230, 2281
Mva1269I GAATGC 2 cut(s) 1941, 2557
MvaI CCWGG 6 cut(s) 546, 618, 797, 1915, 2230, 2281
MvnI CGCG 1 cut(s) 687
MwoI GCNNNNNNNGC 9 cut(s) 229, 404, 1745, 1973, 2033, 2284, 2293, 2357, 2627
NcoI CCATGG 1 cut(s) 1977
NdeI CATATG 2 cut(s) 1721, 2336
NheI GCTAGC 2 cut(s) 1333, 1577
NlaIV GGNNCC 4 cut(s) 858, 968, 1262, 2730
NmuCI GTSAC 2 cut(s) 1781, 2261
NsiI ATGCAT 1 cut(s) 1525
NspV TTCGAA 1 cut(s) 1131
PagI TCATGA 1 cut(s) 978
PceI AGGCCT 1 cut(s) 2486
PciSI GCTCTTC 1 cut(s) 2301
PctI GAATGC 2 cut(s) 1941, 2557
PdmI GAANNNNTTC 1 cut(s) 612
PfeI GAWTC 5 cut(s) 196, 410, 497, 2427, 2698
PflFI GACNNNGTC 1 cut(s) 809
PfoI TCCNGGA 2 cut(s) 544, 795
PkrI GCNGC 3 cut(s) 387, 2362, 2408
PleI GAGTC 4 cut(s) 949, 1102, 1751, 2476
PpsI GAGTC 4 cut(s) 949, 1102, 1751, 2476
Ppu21I YACGTR 1 cut(s) 1537
PshAI GACNNNNGTC 1 cut(s) 855
Psp124BI GAGCTC 1 cut(s) 795
Psp6I CCWGG 6 cut(s) 544, 616, 795, 1913, 2228, 2279
PspEI GGTNACC 1 cut(s) 511
PspGI CCWGG 6 cut(s) 544, 616, 795, 1913, 2228, 2279
PspN4I GGNNCC 4 cut(s) 858, 968, 1262, 2730
PspPI GGNCC 3 cut(s) 367, 857, 2581
PstI CTGCAG 2 cut(s) 387, 2038
PstNI CAGNNNCTG 2 cut(s) 287, 1785
PsuI RGATCY 4 cut(s) 946, 966, 1569, 2038
PsyI GACNNNGTC 1 cut(s) 809
PvuII CAGCTG 2 cut(s) 1697, 2363
RsaI GTAC 7 cut(s) 268, 628, 659, 746, 765, 899, 1140
RsaNI GTAC 7 cut(s) 267, 627, 658, 745, 764, 898, 1139
RseI CAYNNNNRTG 4 cut(s) 255, 1518, 1653, 1982
SacI GAGCTC 1 cut(s) 795
SapI GCTCTTC 1 cut(s) 2301
SaqAI TTAA 5 cut(s) 485, 591, 699, 1143, 1184
SatI GCNGC 3 cut(s) 386, 2361, 2407
Sau96I GGNCC 3 cut(s) 367, 857, 2581
SchI GAGTC 4 cut(s) 950, 1102, 1751, 2477
ScrFI CCNGG 6 cut(s) 546, 618, 797, 1915, 2230, 2281
SduI GDGCHC 3 cut(s) 795, 934, 2280
SfaNI GCATC 3 cut(s) 1510, 1518, 1735
SfcI CTRYAG 4 cut(s) 383, 663, 737, 2034
SfuI TTCGAA 1 cut(s) 1131
SinI GGWCC 1 cut(s) 857
SmiMI CAYNNNNRTG 4 cut(s) 255, 1518, 1653, 1982
SmlI CTYRAG 6 cut(s) 212, 590, 769, 1484, 2465, 2702
SmoI CTYRAG 6 cut(s) 212, 590, 769, 1484, 2465, 2702
SpeI ACTAGT 2 cut(s) 760, 2242
SseBI AGGCCT 1 cut(s) 2486
SsiI CCGC 4 cut(s) 261, 685, 1379, 2407
SspI AATATT 1 cut(s) 55
SstI GAGCTC 1 cut(s) 795
StuI AGGCCT 1 cut(s) 2486
StyD4I CCNGG 6 cut(s) 544, 616, 795, 1913, 2228, 2279
StyI CCWWGG 1 cut(s) 1977
TaaI ACNGT 9 cut(s) 289, 578, 631, 1244, 1471, 1957, 2379, 2521, 2792
TaiI ACGT 2 cut(s) 10, 1539
TaqI TCGA 7 cut(s) 345, 606, 910, 1131, 2133, 2316, 2664
TaqII GACCGA 1 cut(s) 1658
TatI WGTACW 3 cut(s) 744, 763, 1138
TauI GCSGC 1 cut(s) 2409
TfiI GAWTC 5 cut(s) 196, 410, 497, 2427, 2698
Tru1I TTAA 5 cut(s) 485, 591, 699, 1143, 1184
Tru9I TTAA 5 cut(s) 485, 591, 699, 1143, 1184
TseFI GTSAC 2 cut(s) 1781, 2261
TseI GCWGC 2 cut(s) 385, 2360
Tsp45I GTSAC 2 cut(s) 1781, 2261
Tth111I GACNNNGTC 1 cut(s) 809
Vha464I CTTAAG 1 cut(s) 590
VneI GTGCAC 1 cut(s) 930
VpaK11BI GGWCC 1 cut(s) 857
XagI CCTNNNNNAGG 2 cut(s) 912, 2388
XapI RAATTY 5 cut(s) 1161, 1227, 1316, 2544, 2781
XbaI TCTAGA 1 cut(s) 1210
XcmI CCANNNNNNNNNTGG 2 cut(s) 1726, 2522
XmiI GTMKAC 1 cut(s) 2089
XmnI GAANNNNTTC 1 cut(s) 612
Zsp2I ATGCAT 1 cut(s) 1525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.