Rw6G023900

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000164
Physical Location & Seq
Forward (+)
46653763 .. 46656009
2247 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G023900.1

Sequence Viewer

Length: 2160 bp
ATGGAAGATAATAATGAGATGGTTGTACCTACGGAAATGGAGACTAATGGGATGGTTGTACATGCAGAAGTAGAAACTCAACCTATTCAAGTTATTCCTCCATCACAAGAAAATGTCTCTACTTCAGCTTTCTATCCTCAAGTGAGCAATGAGCTTAAACCCTTCAAAGGCCAGGAATTTAAAACATGGGAGGAGGCATATGTTTTTTATACCAAATATGCATCTGCAGCTGGGTTTATTGTAAGAATTGGTTCTAGTAGGAGGAGCAGAAGGACTAATGAGTTTATAAGGAAAGAGTTTCTTTGTAATAGACAAGGAAATAGTCCGAGTGAATTGACTGGTGATGAGAAAAGGATTCGTGGTGTAGTAAGAGAGGACTGCAAGGCAAGAATGATAGTTGGGAGAGTAAACTCTGGTGGATTTGTAGTCAATATATTTGATGAATGTAACACTCACCCGATGACAAGTCCAAAAAGGCGCCACTTGCTAAAGTCCAATCTGCAAGCAGGAGGATTTCAGTACATTGGTTGTACACAACAAGATTTGTACAATCTTGAAAGGGATAAGCGTAAAGAGACAAGAGGGCATGATGGAGAAATGCTGCATGACTATTTTCTACTAGAGCAAGAAAAAGATTCCGGCTTTTATTTTACAATAAAGGTAGATATTGAAAATAAGATTACTCACTGTTTTTGGGCCGATACAAGTTCGAGACAATTGTATAAGTGTTATGGTGATGTGATTATCTTTGACACTACATACCAAACCAATCGGTATAGTTTAATTTTTGCACCATTGATGGGGATAAATAACCATGGTCAGACAATTGTGTTTGGAGCTGCATTCTTAAGTGACGAAACTGCAGATTCATTTATGTGGTTGTTGAAAGAATTTTTGAATGCCATGCCAGGTGGTGCTCCTAAAATGATTATAACTGATCAAGATCCAGCCATGGAAAAAGCTATTTCTGAAGTCCTCCCAGACACATTTCATAGATATTGTAGCTGGCATATCTTGAGAAAGTTTTCTGAGAAGCTTGATGCCATCAAATACAGAGATCACTATGATGACTTTAGAAATTGCATTTACTCATCTGAAAATGGAGAGGAGTTTGACTTCAAATGGAGATCAGTTCTTGCAAAAAGTGGATTAAGCGGACATAATTGGCTGCAATCAATTTATGAAATTCGATTTAGATGGGTGCCGGCCTATATGAACCATGTTTTCTCAGCTGGCATGTCAAGTAGTCAACGAGCTGAAAGTGCGCATTCCTTTTTTAAGGAATATGTTTCTGATCAAAATTCTCTAGTGGACTTCATGGTTCAGTTTAATCGGGGTCTTTTACACAAATGGCATGAGGAGTTGATTTCAGATCACATTGACATCAATGAGAAGCCTAGATTTAAGTGCCCCATTAAGATGGAAAAGCAAATGGCTGATATTTATACACGGAAGTACTATTACAAGTTTCAAGATCAGTTGTGGGAGAGCTATAATTACAATTTGGAGGTTACAACAGAGGGTGAAACTAATTGCATACTTAAGGTCATGCGTGAGGATCATGAGGATGGAAGAGCTCGGGTCATTATGTATGACAAATCAAAAGATTTTGCCTCATGTAGCTGCAAATTATTTGAGAGTGCAGGAGTCCCATGTAGACATGTTTTGGCATTCTTGCACAAAGTACGTCAACTTCATAAATTGCCAGATCAATACATTTTGAAGAGATGGACAAAATCTGCAAGATCTGAGGTTGTGATGGACAAGAGTGACATGGAGGTAACTGTTAGGAAGACTTTACTTGAAAAACGTGGTCTATTGTTCCAGCAATATTCACATGTAATTGATAGTGTTGTCTTAAGTGAAGAAGCAAGTCAATTGTTTAGTGAAACAATGGATTCTTTGATTGAGAAGATTAGGCCACTACTTGCCAATTGTAGCAGTGAAGGTGTGGAGCCTTGTGTAAAAAGAAGTTCAACTCATCAAACTACTTTTCGTGAACCAGATGAAGTTAAGACAAAAGGAAGGGCAAAAAGAATTAAGAGAGGAAAAGAGAAGGCAAATGGAAAGCGCAATAGTACCGGTAGACATTGTCATGGATGTGGCAAAGATGGGCAGACCCATGACAAACGCAATTGTCCAGTGCTGCTCAATCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

719

Amino Acids

83.54

Weight (kDa)

7.98

Isoelectric Point (pI)

48.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 69 - 154 1.9e-16 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 211 - 329 1e-11 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 247 - 340 3e-27 MULE transposase domain
SWIM PF04434 531 - 557 2e-06 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000164)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02320 FvH4_1g21472 FvH4_2g00813 FvH4_2g02512 FvH4_2g03921 FvH4_2g23460 FvH4_3g29141 FvH4_4g05791 FvH4_4g06321 FvH4_4g15595 FvH4_4g18162 FvH4_4g18163 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_5g31093 FvH4_6g01982 FvH4_6g21931 FvH4_6g44691 FvH4_6g48541
prunus_persica Prupe.1G074100_v2.0.a1 Prupe.3G021400_v2.0.a1
pyrus_communis pycom02g18570 pycom14g00670
rosa_chinensis RchiOBHm_Chr1g0379201 RchiOBHm_Chr1g0379361 RchiOBHm_Chr4g0405981 RchiOBHm_Chr5g0073641 RchiOBHm_Chr5g0073651 RchiOBHm_Chr7g0236661
rosa_multiflora Rmu_co8179562.1_g000001 Rmu_co8343647.1_g000001 Rmu_sc0000041.1_g000017 Rmu_sc0000114.1_g000020 Rmu_sc0000286.1_g000006 Rmu_sc0000308.1_g000038 Rmu_sc0000365.1_g000061 Rmu_sc0000365.1_g000062 Rmu_sc0000538.1_g000060 Rmu_sc0000538.1_g000061 Rmu_sc0000586.1_g000016 Rmu_sc0000898.1_g000007 Rmu_sc0000913.1_g000003 Rmu_sc0000913.1_g000004 Rmu_sc0000996.1_g000006 Rmu_sc0000996.1_g000007 Rmu_sc0000998.1_g000003 Rmu_sc0001350.1_g000009 Rmu_sc0002079.1_g000009 Rmu_sc0002200.1_g000013 Rmu_sc0002226.1_g000025 Rmu_sc0002279.1_g000014 Rmu_sc0002478.1_g000014 Rmu_sc0002717.1_g000004 Rmu_sc0002868.1_g000027 Rmu_sc0002889.1_g000043 Rmu_sc0003023.1_g000001 Rmu_sc0003110.1_g000006 Rmu_sc0003226.1_g000028 Rmu_sc0003226.1_g000029 Rmu_sc0003337.1_g000053 Rmu_sc0003558.1_g000007 Rmu_sc0004345.1_g000014 Rmu_sc0004383.1_g000007 Rmu_sc0004888.1_g000021 Rmu_sc0005114.1_g000012 Rmu_sc0005223.1_g000019 Rmu_sc0005223.1_g000020 Rmu_sc0005639.1_g000025 Rmu_sc0005685.1_g000027 Rmu_sc0005992.1_g000002 Rmu_sc0006326.1_g000034 Rmu_sc0006326.1_g000035 Rmu_sc0007390.1_g000012 Rmu_sc0007451.1_g000006 Rmu_sc0007825.1_g000003 Rmu_sc0008600.1_g000023 Rmu_sc0009291.1_g000003 Rmu_sc0012046.1_g000001 Rmu_sc0012046.1_g000002 Rmu_sc0012710.1_g000001 Rmu_sc0015238.1_g000001 Rmu_sc0016125.1_g000003 Rmu_sc0016175.1_g000001 Rmu_sc0016898.1_g000001 Rmu_sc0017323.1_g000010 Rmu_sc0017874.1_g000002 Rmu_sc0019167.1_g000001 Rmu_sc0020815.1_g000006 Rmu_sc0025564.1_g000001 Rmu_sc0026418.1_g000001 Rmu_sc0035188.1_g000002 Rmu_sc0039254.1_g000001 Rmu_ssc0000120.1_g000015 Rmu_ssc0000120.1_g000016 Rmu_ssc0000330.1_g000023 Rmu_ssc0000433.1_g000004
rosa_roxburghii Rroxscaffold_1G00047130 Rroxscaffold_1G00051320 Rroxscaffold_1G00056600 Rroxscaffold_2G00109650 Rroxscaffold_2G00119980 Rroxscaffold_3G00222550 Rroxscaffold_3G00224980 Rroxscaffold_3G00251020 Rroxscaffold_6G00411190 Rroxscaffold_7G00166520 Rroxscaffold_7G00172920 Rroxscaffold_7G00191860 Rroxscaffold_7G00194430
rosa_rugosa Rorug01G0198900 Rorug01G0217300 Rorug01G0244500 Rorug02G0147400 Rorug02G0152200 Rorug02G0595500 Rorug02G0595600 Rorug03G0060500 Rorug03G0203000 Rorug03G0285800 Rorug04G0027200 Rorug04G0027300 Rorug04G0225800 Rorug05G0073400 Rorug05G0213300 Rorug05G0324600 Rorug05G0390900 Rorug05G0391000 Rorug05G0391100 Rorug05G0391200 Rorug05G0462900 Rorug05G0473000 Rorug06G0256500 Rorug07G0199000 Rorug07G0208800 Rorug07G0208800 Rorug07G0316600 Rorug07G0316700
rosa_samantha Rh2BG532400 Rh2CG581900 Rh3CG322600 Rh6AG079900 Rh6AG250800 Rh6AG496300 Rh6BG506100 Rh6CG126000 Rh6CG511700 Rh6DG109400 Rh6DG112700 Rh7CG104500 Rh7CG322000 Rh7CG431500
rosa_wichuraiana Rw0G020410 Rw1G009190 Rw1G014580 Rw1G021000 Rw1G022190 Rw2G025900 Rw2G029920 Rw2G037530 Rw3G018560 Rw3G020560 Rw4G008500 Rw4G022520 Rw5G019030 Rw5G031180 Rw5G044830 Rw6G005010 Rw6G006890 Rw6G011330 Rw6G011380 Rw6G023900 Rw7G028490 Rw7G030170 Rw7G030370 Rw7G032030 Rw7G032040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 287, 932
Acc16I TGCGCA 1 cut(s) 1266
AccB1I GGYRCC 2 cut(s) 477, 1201
AccI GTMKAC 2 cut(s) 1657, 2086
AciI CCGC 1 cut(s) 1155
AclWI GGATC 2 cut(s) 938, 1566
AcsI RAATTY 4 cut(s) 176, 890, 1185, 1300
AcuI CTGAAG 2 cut(s) 108, 990
AcyI GRCGYC 1 cut(s) 478
AfaI GTAC 8 cut(s) 27, 60, 521, 532, 548, 1457, 1686, 2080
AfiI CCNNNNNNNGG 2 cut(s) 167, 800
AflII CTTAAG 3 cut(s) 847, 1541, 1858
AflIII ACRYGT 2 cut(s) 1660, 1837
AgeI ACCGGT 1 cut(s) 2081
AjnI CCWGG 2 cut(s) 171, 907
Alw21I GWGCWC 2 cut(s) 919, 1579
Alw26I GTCTC 4 cut(s) 35, 121, 569, 706
AlwI GGATC 2 cut(s) 938, 1566
Ama87I CYCGRG 1 cut(s) 1578
AoxI GGCC 4 cut(s) 169, 696, 1206, 1919
ApeKI GCWGC 6 cut(s) 227, 601, 839, 1168, 1623, 2146
ApoI RAATTY 4 cut(s) 176, 890, 1185, 1300
AsiGI ACCGGT 1 cut(s) 2081
Asp700I GAANNNNTTC 2 cut(s) 250, 1024
AspLEI GCGC 3 cut(s) 480, 1267, 2073
AspS9I GGNCC 1 cut(s) 696
AsuHPI GGTGA 4 cut(s) 353, 446, 746, 1535
AvaI CYCGRG 1 cut(s) 1578
BaeGI GKGCMC 1 cut(s) 1412
BanI GGYRCC 2 cut(s) 477, 1201
BanII GRGCYC 1 cut(s) 1579
BarI GAAGNNNNNNTAC 4 cut(s) 1445, 1477, 1677, 1709
BbsI GAAGAC 1 cut(s) 1799
Bbv12I GWGCWC 2 cut(s) 919, 1579
BbvI GCAGC 6 cut(s) 239, 588, 826, 1155, 1610, 2133
BciT130I CCWGG 2 cut(s) 173, 909
BclI TGATCA 2 cut(s) 937, 1294
BcoDI GTCTC 4 cut(s) 35, 121, 569, 706
BfaI CTAG 4 cut(s) 255, 620, 1307, 1398
BfmI CTRYAG 2 cut(s) 225, 861
BfoI RGCGCY 1 cut(s) 481
BfrI CTTAAG 3 cut(s) 847, 1541, 1858
BglII AGATCT 1 cut(s) 1745
BisI GCNGC 6 cut(s) 228, 602, 840, 1169, 1624, 2147
BlsI GCNGC 6 cut(s) 229, 603, 841, 1170, 1625, 2148
BmcAI AGTACT 1 cut(s) 1457
Bme1390I CCNGG 2 cut(s) 173, 909
BmeT110I CYCGRG 1 cut(s) 1578
BmgT120I GGNCC 1 cut(s) 696
BmiI GGNNCC 3 cut(s) 479, 1203, 1956
BmrFI CCNGG 2 cut(s) 173, 909
BmsI GCATC 2 cut(s) 230, 1030
BpiI GAAGAC 1 cut(s) 1799
BpuEI CTTGAG 2 cut(s) 123, 1036
BsaBI GATNNNNATC 1 cut(s) 942
BsaHI GRCGYC 1 cut(s) 478
BsaJI CCNNGG 2 cut(s) 814, 951
BsaWI WCCGGW 1 cut(s) 2081
Bsc4I CCNNNNNNNGG 2 cut(s) 167, 800
Bse118I RCCGGY 2 cut(s) 1204, 2081
Bse1I ACTGG 2 cut(s) 343, 2141
Bse3DI GCAATG 1 cut(s) 154
Bse8I GATNNNNATC 1 cut(s) 942
BseBI CCWGG 2 cut(s) 173, 909
BseDI CCNNGG 2 cut(s) 814, 951
BseGI GGATG 3 cut(s) 57, 1573, 2105
BseJI GATNNNNATC 1 cut(s) 942
BseLI CCNNNNNNNGG 2 cut(s) 167, 800
BseMI GCAATG 1 cut(s) 154
BseMII CTCAG 3 cut(s) 1020, 1242, 1740
BseNI ACTGG 2 cut(s) 343, 2141
BseRI GAGGAG 4 cut(s) 206, 277, 1121, 1373
BseSI GKGCMC 1 cut(s) 1412
BseXI GCAGC 6 cut(s) 239, 588, 826, 1155, 1610, 2133
BseYI CCCAGC 1 cut(s) 230
BsgI GTGCAG 1 cut(s) 1662
BshFI GGCC 4 cut(s) 171, 698, 1208, 1921
BshNI GGYRCC 2 cut(s) 477, 1201
BshTI ACCGGT 1 cut(s) 2081
BsiHKAI GWGCWC 2 cut(s) 919, 1579
BsiHKCI CYCGRG 1 cut(s) 1578
BsiSI CCGG 3 cut(s) 639, 1205, 2082
BslFI GGGAC 1 cut(s) 1634
BslI CCNNNNNNNGG 2 cut(s) 167, 800
BsmAI GTCTC 4 cut(s) 35, 121, 569, 706
BsmFI GGGAC 1 cut(s) 1634
BsmI GAATGC 4 cut(s) 842, 904, 1267, 1670
BsnI GGCC 4 cut(s) 171, 698, 1208, 1921
BsoBI CYCGRG 1 cut(s) 1578
Bsp1286I GDGCHC 3 cut(s) 919, 1412, 1579
Bsp1407I TGTACA 3 cut(s) 58, 530, 546
Bsp19I CCATGG 2 cut(s) 814, 951
BspACI CCGC 1 cut(s) 1155
BspANI GGCC 4 cut(s) 171, 698, 1208, 1921
BspCNI CTCAG 3 cut(s) 1021, 1241, 1741
BspHI TCATGA 1 cut(s) 1561
BspLI GGNNCC 3 cut(s) 479, 1203, 1956
BspMAI CTGCAG 2 cut(s) 229, 865
BspPI GGATC 2 cut(s) 938, 1566
BspQI GCTCTTC 1 cut(s) 1567
BspT107I GGYRCC 2 cut(s) 477, 1201
BspTI CTTAAG 3 cut(s) 847, 1541, 1858
BsrDI GCAATG 1 cut(s) 154
BsrFI RCCGGY 2 cut(s) 1204, 2081
BsrGI TGTACA 3 cut(s) 58, 530, 546
BsrI ACTGG 2 cut(s) 343, 2141
BssAI RCCGGY 2 cut(s) 1204, 2081
BssECI CCNNGG 2 cut(s) 814, 951
BssNI GRCGYC 1 cut(s) 478
BssT1I CCWWGG 2 cut(s) 814, 951
Bst2UI CCWGG 2 cut(s) 173, 909
Bst4CI ACNGT 2 cut(s) 689, 1786
Bst6I CTCTTC 2 cut(s) 1567, 1718
BstACI GRCGYC 1 cut(s) 478
BstAFI CTTAAG 3 cut(s) 847, 1541, 1858
BstAUI TGTACA 3 cut(s) 58, 530, 546
BstC8I GCNNGC 4 cut(s) 504, 1007, 1206, 1234
BstDEI CTNAG 3 cut(s) 1029, 1228, 1749
BstDSI CCRYGG 2 cut(s) 814, 951
BstF5I GGATG 3 cut(s) 57, 1573, 2105
BstH2I RGCGCY 1 cut(s) 481
BstHHI GCGC 3 cut(s) 480, 1267, 2073
BstMAI GTCTC 4 cut(s) 35, 121, 569, 706
BstMWI GCNNNNNNNGC 3 cut(s) 227, 484, 1262
BstNI CCWGG 2 cut(s) 173, 909
BstNSI RCATGY 4 cut(s) 65, 1240, 1664, 1841
BstSCI CCNGG 2 cut(s) 171, 907
BstSFI CTRYAG 2 cut(s) 225, 861
BstSLI GKGCMC 1 cut(s) 1412
BstV1I GCAGC 6 cut(s) 239, 588, 826, 1155, 1610, 2133
BstV2I GAAGAC 1 cut(s) 1799
BstX2I RGATCY 2 cut(s) 943, 1745
BstXI CCANNNNNNTGG 1 cut(s) 1420
BstYI RGATCY 2 cut(s) 943, 1745
BsuRI GGCC 4 cut(s) 171, 698, 1208, 1921
BtgI CCRYGG 2 cut(s) 814, 951
BtsCI GGATG 3 cut(s) 57, 1573, 2105
BtsI GCAGTG 1 cut(s) 1948
BtsIMutI CAGTG 3 cut(s) 685, 1948, 2148
Cac8I GCNNGC 4 cut(s) 504, 1007, 1206, 1234
CciI TCATGA 1 cut(s) 1561
CfoI GCGC 3 cut(s) 480, 1267, 2073
Cfr10I RCCGGY 2 cut(s) 1204, 2081
Cfr13I GGNCC 1 cut(s) 696
Csp6I GTAC 8 cut(s) 26, 59, 520, 531, 547, 1456, 1685, 2079
CspAI ACCGGT 1 cut(s) 2081
CviQI GTAC 8 cut(s) 26, 59, 520, 531, 547, 1456, 1685, 2079
DdeI CTNAG 3 cut(s) 1029, 1228, 1749
DinI GGCGCC 1 cut(s) 479
DraI TTTAAA 1 cut(s) 181
Eam1104I CTCTTC 2 cut(s) 1567, 1718
EarI CTCTTC 2 cut(s) 1567, 1718
Ecl136II GAGCTC 1 cut(s) 1577
Eco130I CCWWGG 2 cut(s) 814, 951
Eco24I GRGCYC 1 cut(s) 1579
Eco53kI GAGCTC 1 cut(s) 1577
Eco57I CTGAAG 2 cut(s) 108, 990
Eco88I CYCGRG 1 cut(s) 1578
EcoICRI GAGCTC 1 cut(s) 1577
EcoRII CCWGG 2 cut(s) 171, 907
EcoT14I CCWWGG 2 cut(s) 814, 951
EcoT22I ATGCAT 1 cut(s) 223
EcoT38I GRGCYC 1 cut(s) 1579
EgeI GGCGCC 1 cut(s) 479
EheI GGCGCC 1 cut(s) 479
ErhI CCWWGG 2 cut(s) 814, 951
FalI AAGNNNNNCTT 2 cut(s) 285, 317
FaqI GGGAC 1 cut(s) 1634
FauNDI CATATG 1 cut(s) 199
FbaI TGATCA 2 cut(s) 937, 1294
FblI GTMKAC 2 cut(s) 1657, 2086
Fnu4HI GCNGC 6 cut(s) 228, 602, 840, 1169, 1624, 2147
FokI GGATG 3 cut(s) 64, 1580, 2112
FriOI GRGCYC 1 cut(s) 1579
Fsp4HI GCNGC 6 cut(s) 228, 602, 840, 1169, 1624, 2147
FspAI RTGCGCAY 1 cut(s) 1266
FspBI CTAG 4 cut(s) 255, 620, 1307, 1398
FspI TGCGCA 1 cut(s) 1266
GlaI GCGC 3 cut(s) 479, 1266, 2072
GluI GCNGC 6 cut(s) 228, 602, 840, 1169, 1624, 2147
GsaI CCCAGC 1 cut(s) 234
HaeII RGCGCY 1 cut(s) 481
HaeIII GGCC 4 cut(s) 171, 698, 1208, 1921
HapII CCGG 3 cut(s) 639, 1205, 2082
HhaI GCGC 3 cut(s) 480, 1267, 2073
Hin1I GRCGYC 1 cut(s) 478
Hin6I GCGC 3 cut(s) 478, 1265, 2071
HinP1I GCGC 3 cut(s) 478, 1265, 2071
HincII GTYRAC 2 cut(s) 1250, 1691
HindII GTYRAC 2 cut(s) 1250, 1691
HindIII AAGCTT 1 cut(s) 1034
HinfI GANTC 5 cut(s) 355, 635, 866, 1647, 1898
HpaII CCGG 3 cut(s) 639, 1205, 2082
HphI GGTGA 4 cut(s) 353, 446, 746, 1535
Hpy166II GTNNAC 8 cut(s) 409, 533, 1250, 1312, 1658, 1691, 2000, 2087
Hpy188I TCNGA 8 cut(s) 327, 822, 970, 1030, 1096, 1294, 1372, 1750
Hpy188III TCNNGA 7 cut(s) 554, 711, 941, 1015, 1472, 1562, 1997
Hpy8I GTNNAC 8 cut(s) 409, 533, 1250, 1312, 1658, 1691, 2000, 2087
HpyAV CCTTC 5 cut(s) 172, 264, 1940, 2019, 2050
HpyCH4III ACNGT 2 cut(s) 689, 1786
HpyCH4IV ACGT 2 cut(s) 1687, 1810
HpyF10VI GCNNNNNNNGC 3 cut(s) 227, 484, 1262
HpyF3I CTNAG 3 cut(s) 1029, 1228, 1749
HpySE526I ACGT 2 cut(s) 1687, 1810
Hsp92I GRCGYC 1 cut(s) 478
HspAI GCGC 3 cut(s) 478, 1265, 2071
KasI GGCGCC 1 cut(s) 477
KroI GCCGGC 1 cut(s) 1204
KroNI GCCGGC 1 cut(s) 1206
Ksp22I TGATCA 2 cut(s) 937, 1294
LguI GCTCTTC 1 cut(s) 1567
LmnI GCTCC 4 cut(s) 264, 836, 922, 1954
Lsp1109I GCAGC 6 cut(s) 239, 588, 826, 1155, 1610, 2133
LweI GCATC 2 cut(s) 230, 1030
MaeI CTAG 4 cut(s) 255, 620, 1307, 1398
MaeII ACGT 2 cut(s) 1687, 1810
MaeIII GTNAC 5 cut(s) 446, 851, 1510, 1769, 1780
MboII GAAGA 6 cut(s) 17, 1584, 1735, 1804, 1877, 1924
MfeI CAATTG 5 cut(s) 716, 825, 1877, 1933, 2134
MflI RGATCY 2 cut(s) 943, 1745
MhlI GDGCHC 3 cut(s) 919, 1412, 1579
Mly113I GGCGCC 1 cut(s) 478
MlyI GAGTC 1 cut(s) 1656
Mph1103I ATGCAT 1 cut(s) 223
MroNI GCCGGC 1 cut(s) 1204
MroXI GAANNNNTTC 2 cut(s) 250, 1024
MslI CAYNNNNRTG 6 cut(s) 874, 1065, 1418, 1566, 2094, 2100
MspA1I CMGCKG 2 cut(s) 230, 1232
MspCI CTTAAG 3 cut(s) 847, 1541, 1858
MspI CCGG 3 cut(s) 639, 1205, 2082
MspR9I CCNGG 2 cut(s) 173, 909
MunI CAATTG 5 cut(s) 716, 825, 1877, 1933, 2134
Mva1269I GAATGC 4 cut(s) 842, 904, 1267, 1670
MvaI CCWGG 2 cut(s) 173, 909
MwoI GCNNNNNNNGC 3 cut(s) 227, 484, 1262
NaeI GCCGGC 1 cut(s) 1206
NarI GGCGCC 1 cut(s) 478
NcoI CCATGG 2 cut(s) 814, 951
NdeI CATATG 1 cut(s) 199
NgoMIV GCCGGC 1 cut(s) 1204
NlaIV GGNNCC 3 cut(s) 479, 1203, 1956
NmuCI GTSAC 2 cut(s) 851, 1769
NsbI TGCGCA 1 cut(s) 1266
NsiI ATGCAT 1 cut(s) 223
NspI RCATGY 4 cut(s) 65, 1240, 1664, 1841
PagI TCATGA 1 cut(s) 1561
PciI ACATGT 2 cut(s) 1660, 1837
PciSI GCTCTTC 1 cut(s) 1567
PctI GAATGC 4 cut(s) 842, 904, 1267, 1670
PdiI GCCGGC 1 cut(s) 1206
PdmI GAANNNNTTC 2 cut(s) 250, 1024
PfeI GAWTC 4 cut(s) 355, 635, 866, 1898
PflFI GACNNNGTC 1 cut(s) 2091
PinAI ACCGGT 1 cut(s) 2081
PkrI GCNGC 6 cut(s) 229, 603, 841, 1170, 1625, 2148
PleI GAGTC 1 cut(s) 1655
PluTI GGCGCC 1 cut(s) 481
PpsI GAGTC 1 cut(s) 1655
PscI ACATGT 2 cut(s) 1660, 1837
PsiI TTATAA 2 cut(s) 287, 932
Psp124BI GAGCTC 1 cut(s) 1579
Psp6I CCWGG 2 cut(s) 171, 907
PspFI CCCAGC 1 cut(s) 230
PspGI CCWGG 2 cut(s) 171, 907
PspN4I GGNNCC 3 cut(s) 479, 1203, 1956
PspPI GGNCC 1 cut(s) 696
PstI CTGCAG 2 cut(s) 229, 865
PsuI RGATCY 2 cut(s) 943, 1745
PsyI GACNNNGTC 1 cut(s) 2091
PvuII CAGCTG 2 cut(s) 230, 1232
RsaI GTAC 8 cut(s) 27, 60, 521, 532, 548, 1457, 1686, 2080
RsaNI GTAC 8 cut(s) 26, 59, 520, 531, 547, 1456, 1685, 2079
RseI CAYNNNNRTG 6 cut(s) 874, 1065, 1418, 1566, 2094, 2100
SacI GAGCTC 1 cut(s) 1579
SapI GCTCTTC 1 cut(s) 1567
SatI GCNGC 6 cut(s) 228, 602, 840, 1169, 1624, 2147
Sau96I GGNCC 1 cut(s) 696
ScaI AGTACT 1 cut(s) 1457
SchI GAGTC 1 cut(s) 1656
ScrFI CCNGG 2 cut(s) 173, 909
SduI GDGCHC 3 cut(s) 919, 1412, 1579
SfaNI GCATC 2 cut(s) 230, 1030
SfcI CTRYAG 2 cut(s) 225, 861
SfoI GGCGCC 1 cut(s) 479
SmiMI CAYNNNNRTG 6 cut(s) 874, 1065, 1418, 1566, 2094, 2100
SmlI CTYRAG 5 cut(s) 138, 847, 1015, 1541, 1858
SmoI CTYRAG 5 cut(s) 138, 847, 1015, 1541, 1858
SsiI CCGC 1 cut(s) 1155
SspDI GGCGCC 1 cut(s) 477
SspI AATATT 1 cut(s) 1832
SspMI CTAG 4 cut(s) 255, 620, 1307, 1398
SstI GAGCTC 1 cut(s) 1579
StyD4I CCNGG 2 cut(s) 171, 907
StyI CCWWGG 2 cut(s) 814, 951
TaaI ACNGT 2 cut(s) 689, 1786
TaiI ACGT 2 cut(s) 1690, 1813
TaqI TCGA 2 cut(s) 710, 1189
TatI WGTACW 5 cut(s) 58, 519, 530, 546, 1455
TfiI GAWTC 4 cut(s) 355, 635, 866, 1898
TscAI CASTG 3 cut(s) 692, 1948, 2148
TseFI GTSAC 2 cut(s) 851, 1769
TseI GCWGC 6 cut(s) 227, 601, 839, 1168, 1623, 2146
Tsp45I GTSAC 2 cut(s) 851, 1769
TspDTI ATGAA 8 cut(s) 456, 858, 980, 1197, 1229, 1306, 1685, 2022
TspGWI ACGGA 2 cut(s) 47, 1465
TspRI CASTG 3 cut(s) 692, 1948, 2148
Tth111I GACNNNGTC 1 cut(s) 2091
Vha464I CTTAAG 3 cut(s) 847, 1541, 1858
XapI RAATTY 4 cut(s) 176, 890, 1185, 1300
XceI RCATGY 4 cut(s) 65, 1240, 1664, 1841
XmiI GTMKAC 2 cut(s) 1657, 2086
XmnI GAANNNNTTC 2 cut(s) 250, 1024
XspI CTAG 4 cut(s) 255, 620, 1307, 1398
ZrmI AGTACT 1 cut(s) 1457
Zsp2I ATGCAT 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.