Rmu_ssc0000120.1_g000015

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000120.1
OG0000164
Physical Location & Seq
Forward (+)
81158 .. 86135
4978 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000120.1_g000015.1.cds

Sequence Viewer

Length: 2235 bp
atgcatttgaccatatggaaatatccagtcaatgagtgtgatagtattcgaaaaacctatgttttattgggtccatttcaacctgagttagaatttccattcactgaacaagggagtcaacaacgtagatttcagttttcttggttcaaggacaatccatggcttgaatattcaattgctcttgatagggcatattgctttccttgttttctatttgacactgaagattctcactatccagcattcaccgttgatgggtttaaggcttggaagagggtttgtggtggtgataatgtgttgatgaagcatgtaggaggccttaattctccccatcatgctgcaatgcaaaaatgggatttattaagaaatcctaccaaacaaattgaaacaatttttcagtcaaaatctagtaaggatatagaggacaatcgattgaggcttaaggcttcaatagaaagtgtaagattgctagctaatcaaggagctgcttttagaggccatgatgaaactgaaaactcattgaatgcgggatattttagagaagtcataaaatctttttcaagaatgagtattgaggttgagagagttgttttgggaaatgctccgggaaatgccaagtactttagtccatcaattcaaaagcaacttctaaatattcttggtaataaagcgggtggcattgaaaatattggttgtacacaacgtgatttgtataattatggaagaagttgtcgtcaagagaagaaggggcatgatggagatctattgtacatgcattttcagaatgagaaagaaaaagattcttcttctatctatataatggagtcagatgaggaaaacagagtaacgcggtgcttttgggctgattcaatttcaagacgagcttacagcttttatagaaatgtagttatctttgacactacatacaacacaaatcggtatggaatgatttttgcaccattcactggtgttaataatcatgggcggacaatcatctttacttctgcattcttaaatgatgagacaactaattcttttgtttggttgttcaaggaatttctgaaggctatgccaggaaatgccccagaaaatgcccccaaaattattattgctgatcaagatcctgctatgactaaagcgatttcagaagcactcccacaaacatttcatagatattgcagttggcacattctaaataagttttttgagaagctagatacgattaaatatcgggattactaccaagactttcatagctgcatatggaattcaattagtagagaggagtttgactctatatggactgaaattattgagaaaagtgggttgagtgataacaagtggttgcagtcaatatatgaaattcgttcatcatggataccagcacatactcgagctcttcctcctcctccttactcaaactcgccgctgttgttaccctcatcgcctccttcatttacctcctcggcttctttggcatcgacttcgtctagtccttcatctcacaagcctcccactacgacgatgacatcctcattgactcccgctgctgcatgcccccctcggccaaacccaatgtcgtcgacactgacccgacattatactccgaggaggacgaggacatcatccaagccagatcatatcaatattggtgacaaggcaagaactgtcatgtcacttgacattgaagatcatatggccaagatttatacacgtaagatattttatgaagttcaagaacagttgagagagagcttcaaatataaactagaacttctaagagaaaatgtcactatgaatgggaggtcactgcagggtttgcctcttgaaggattcgattatgactccattttaggacagtgctgcgagttgccggtcggagacaaaataaaggaaagcttccatgatagaccaagaattgacaaatctaatcctaatgatggcaagttcatagaaaatgtggaggaatgtgacattatacctactcctggaaagttaacaatatatggtgtcggattatgtgagctagcagtggataacatcaataatatagttgctttcagtaccgtattcgaagagggggatataagcaagatacttcatggagttccattgaaggagggaattgttcgtgtatcggtggatggtatacttaaaccaaatgcacagcttcctttccccattgcgggtgagatggaattcgttagagaaccagttgggagtcacgtagcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

744

Amino Acids

84.83

Weight (kDa)

6.49

Isoelectric Point (pI)

58.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000164)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02320 FvH4_1g21472 FvH4_2g00813 FvH4_2g02512 FvH4_2g03921 FvH4_2g23460 FvH4_3g29141 FvH4_4g05791 FvH4_4g06321 FvH4_4g15595 FvH4_4g18162 FvH4_4g18163 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_5g31093 FvH4_6g01982 FvH4_6g21931 FvH4_6g44691 FvH4_6g48541
prunus_persica Prupe.1G074100_v2.0.a1 Prupe.3G021400_v2.0.a1
pyrus_communis pycom02g18570 pycom14g00670
rosa_chinensis RchiOBHm_Chr1g0379201 RchiOBHm_Chr1g0379361 RchiOBHm_Chr4g0405981 RchiOBHm_Chr5g0073641 RchiOBHm_Chr5g0073651 RchiOBHm_Chr7g0236661
rosa_multiflora Rmu_co8179562.1_g000001 Rmu_co8343647.1_g000001 Rmu_sc0000041.1_g000017 Rmu_sc0000114.1_g000020 Rmu_sc0000286.1_g000006 Rmu_sc0000308.1_g000038 Rmu_sc0000365.1_g000061 Rmu_sc0000365.1_g000062 Rmu_sc0000538.1_g000060 Rmu_sc0000538.1_g000061 Rmu_sc0000586.1_g000016 Rmu_sc0000898.1_g000007 Rmu_sc0000913.1_g000003 Rmu_sc0000913.1_g000004 Rmu_sc0000996.1_g000006 Rmu_sc0000996.1_g000007 Rmu_sc0000998.1_g000003 Rmu_sc0001350.1_g000009 Rmu_sc0002079.1_g000009 Rmu_sc0002200.1_g000013 Rmu_sc0002226.1_g000025 Rmu_sc0002279.1_g000014 Rmu_sc0002478.1_g000014 Rmu_sc0002717.1_g000004 Rmu_sc0002868.1_g000027 Rmu_sc0002889.1_g000043 Rmu_sc0003023.1_g000001 Rmu_sc0003110.1_g000006 Rmu_sc0003226.1_g000028 Rmu_sc0003226.1_g000029 Rmu_sc0003337.1_g000053 Rmu_sc0003558.1_g000007 Rmu_sc0004345.1_g000014 Rmu_sc0004383.1_g000007 Rmu_sc0004888.1_g000021 Rmu_sc0005114.1_g000012 Rmu_sc0005223.1_g000019 Rmu_sc0005223.1_g000020 Rmu_sc0005639.1_g000025 Rmu_sc0005685.1_g000027 Rmu_sc0005992.1_g000002 Rmu_sc0006326.1_g000034 Rmu_sc0006326.1_g000035 Rmu_sc0007390.1_g000012 Rmu_sc0007451.1_g000006 Rmu_sc0007825.1_g000003 Rmu_sc0008600.1_g000023 Rmu_sc0009291.1_g000003 Rmu_sc0012046.1_g000001 Rmu_sc0012046.1_g000002 Rmu_sc0012710.1_g000001 Rmu_sc0015238.1_g000001 Rmu_sc0016125.1_g000003 Rmu_sc0016175.1_g000001 Rmu_sc0016898.1_g000001 Rmu_sc0017323.1_g000010 Rmu_sc0017874.1_g000002 Rmu_sc0019167.1_g000001 Rmu_sc0020815.1_g000006 Rmu_sc0025564.1_g000001 Rmu_sc0026418.1_g000001 Rmu_sc0035188.1_g000002 Rmu_sc0039254.1_g000001 Rmu_ssc0000120.1_g000015 Rmu_ssc0000120.1_g000016 Rmu_ssc0000330.1_g000023 Rmu_ssc0000433.1_g000004
rosa_roxburghii Rroxscaffold_1G00047130 Rroxscaffold_1G00051320 Rroxscaffold_1G00056600 Rroxscaffold_2G00109650 Rroxscaffold_2G00119980 Rroxscaffold_3G00222550 Rroxscaffold_3G00224980 Rroxscaffold_3G00251020 Rroxscaffold_6G00411190 Rroxscaffold_7G00166520 Rroxscaffold_7G00172920 Rroxscaffold_7G00191860 Rroxscaffold_7G00194430
rosa_rugosa Rorug01G0198900 Rorug01G0217300 Rorug01G0244500 Rorug02G0147400 Rorug02G0152200 Rorug02G0595500 Rorug02G0595600 Rorug03G0060500 Rorug03G0203000 Rorug03G0285800 Rorug04G0027200 Rorug04G0027300 Rorug04G0225800 Rorug05G0073400 Rorug05G0213300 Rorug05G0324600 Rorug05G0390900 Rorug05G0391000 Rorug05G0391100 Rorug05G0391200 Rorug05G0462900 Rorug05G0473000 Rorug06G0256500 Rorug07G0199000 Rorug07G0208800 Rorug07G0208800 Rorug07G0316600 Rorug07G0316700
rosa_samantha Rh2BG532400 Rh2CG581900 Rh3CG322600 Rh6AG079900 Rh6AG250800 Rh6AG496300 Rh6BG506100 Rh6CG126000 Rh6CG511700 Rh6DG109400 Rh6DG112700 Rh7CG104500 Rh7CG322000 Rh7CG431500
rosa_wichuraiana Rw0G020410 Rw1G009190 Rw1G014580 Rw1G021000 Rw1G022190 Rw2G025900 Rw2G029920 Rw2G037530 Rw3G018560 Rw3G020560 Rw4G008500 Rw4G022520 Rw5G019030 Rw5G031180 Rw5G044830 Rw6G005010 Rw6G006890 Rw6G011330 Rw6G011380 Rw6G023900 Rw7G028490 Rw7G030170 Rw7G030370 Rw7G032030 Rw7G032040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 965
AccI GTMKAC 2 cut(s) 1583, 2149
AccII CGCG 1 cut(s) 850
AciI CCGC 7 cut(s) 527, 671, 850, 985, 1427, 1545, 2186
AclWI GGATC 1 cut(s) 1115
AcoI YGGCCR 2 cut(s) 1565, 1698
AcsI RAATTY 5 cut(s) 92, 1055, 1267, 1362, 2198
AcuI CTGAAG 2 cut(s) 243, 1082
AdeI CACNNNGTG 1 cut(s) 704
AfaI GTAC 4 cut(s) 620, 697, 770, 2065
AfiI CCNNNNNNNGG 7 cut(s) 255, 965, 1829, 1940, 1988, 2185, 2186
AflII CTTAAG 1 cut(s) 440
AflIII ACRYGT 1 cut(s) 1712
AjnI CCWGG 2 cut(s) 1072, 1987
Alw21I GWGCWC 1 cut(s) 1399
Alw26I GTCTC 2 cut(s) 1016, 1875
AlwI GGATC 1 cut(s) 1115
Ama87I CYCGRG 1 cut(s) 1392
AoxI GGCC 4 cut(s) 316, 496, 1565, 1698
ApeKI GCWGC 6 cut(s) 338, 485, 1257, 1547, 1550, 1863
ApoI RAATTY 5 cut(s) 92, 1055, 1267, 1362, 2198
ArsI GACNNNNNNTTYG 2 cut(s) 1562, 1594
AspS9I GGNCC 1 cut(s) 71
AsuC2I CCSGG 1 cut(s) 606
AsuHPI GGTGA 4 cut(s) 238, 299, 1664, 2201
AsuII TTCGAA 2 cut(s) 49, 2073
AsuNHI GCTAGC 2 cut(s) 469, 2026
AvaI CYCGRG 1 cut(s) 1392
AvaII GGWCC 1 cut(s) 71
BalI TGGCCA 1 cut(s) 1700
BanII GRGCYC 1 cut(s) 1399
Bbv12I GWGCWC 1 cut(s) 1399
BbvI GCAGC 6 cut(s) 325, 472, 1244, 1534, 1537, 1850
BccI CCATC 7 cut(s) 248, 339, 637, 749, 1934, 2138, 2188
BcgI CGANNNNNNTGC 2 cut(s) 1467, 1501
BciT130I CCWGG 2 cut(s) 1074, 1989
BciVI GTATCC 1 cut(s) 1371
BclI TGATCA 1 cut(s) 1114
BcnI CCSGG 1 cut(s) 606
BcoDI GTCTC 2 cut(s) 1016, 1875
BfaI CTAG 6 cut(s) 408, 470, 1214, 1491, 1769, 2027
BfmI CTRYAG 1 cut(s) 1811
BfrI CTTAAG 1 cut(s) 440
BfuI GTATCC 1 cut(s) 1371
BglII AGATCT 1 cut(s) 760
BisI GCNGC 7 cut(s) 339, 486, 1258, 1427, 1548, 1551, 1864
BlsI GCNGC 7 cut(s) 340, 487, 1259, 1428, 1549, 1552, 1865
BmcAI AGTACT 1 cut(s) 620
Bme1390I CCNGG 3 cut(s) 606, 1074, 1989
Bme18I GGWCC 1 cut(s) 71
BmeT110I CYCGRG 1 cut(s) 1392
BmgT120I GGNCC 1 cut(s) 71
BmiI GGNNCC 1 cut(s) 72
BmrFI CCNGG 3 cut(s) 606, 1074, 1989
BmsI GCATC 1 cut(s) 1487
BmtI GCTAGC 2 cut(s) 473, 2030
BplI GAGNNNNNCTC 2 cut(s) 1277, 1309
Bpu14I TTCGAA 2 cut(s) 49, 2073
BpuMI CCSGG 1 cut(s) 606
Bsa29I ATCGAT 1 cut(s) 430
BsaAI YACGTR 2 cut(s) 1715, 2227
BsaBI GATNNNNATC 2 cut(s) 759, 1119
BsaJI CCNNGG 4 cut(s) 158, 1464, 1562, 1607
Bsc4I CCNNNNNNNGG 7 cut(s) 255, 965, 1829, 1940, 1988, 2185, 2186
Bse118I RCCGGY 1 cut(s) 1873
Bse1I ACTGG 3 cut(s) 26, 970, 2213
Bse3DI GCAATG 2 cut(s) 348, 2181
Bse8I GATNNNNATC 2 cut(s) 759, 1119
BseBI CCWGG 2 cut(s) 1074, 1989
BseCI ATCGAT 1 cut(s) 430
BseDI CCNNGG 4 cut(s) 158, 1464, 1562, 1607
BseGI GGATG 3 cut(s) 1529, 1625, 2149
BseJI GATNNNNATC 2 cut(s) 759, 1119
BseLI CCNNNNNNNGG 7 cut(s) 255, 965, 1829, 1940, 1988, 2185, 2186
BseMI GCAATG 2 cut(s) 348, 2181
BseMII CTCAG 1 cut(s) 75
BseNI ACTGG 3 cut(s) 26, 970, 2213
BseRI GAGGAG 5 cut(s) 1298, 1395, 1398, 1453, 1624
BseXI GCAGC 6 cut(s) 325, 472, 1244, 1534, 1537, 1850
Bsh1236I CGCG 1 cut(s) 850
Bsh1285I CGRYCG 1 cut(s) 1878
BshFI GGCC 4 cut(s) 318, 498, 1567, 1700
BshVI ATCGAT 1 cut(s) 430
BsiEI CGRYCG 1 cut(s) 1878
BsiHKAI GWGCWC 1 cut(s) 1399
BsiHKCI CYCGRG 1 cut(s) 1392
BsiSI CCGG 2 cut(s) 605, 1874
BslI CCNNNNNNNGG 7 cut(s) 255, 965, 1829, 1940, 1988, 2185, 2186
BsmAI GTCTC 2 cut(s) 1016, 1875
BsmI GAATGC 3 cut(s) 242, 529, 1007
BsnI GGCC 4 cut(s) 318, 498, 1567, 1700
BsoBI CYCGRG 1 cut(s) 1392
Bsp119I TTCGAA 2 cut(s) 49, 2073
Bsp1286I GDGCHC 1 cut(s) 1399
Bsp1407I TGTACA 2 cut(s) 695, 768
Bsp143I GATC 5 cut(s) 760, 1114, 1120, 1636, 1690
Bsp19I CCATGG 1 cut(s) 158
BspACI CCGC 7 cut(s) 527, 671, 850, 985, 1427, 1545, 2186
BspANI GGCC 4 cut(s) 318, 498, 1567, 1700
BspCNI CTCAG 1 cut(s) 76
BspDI ATCGAT 1 cut(s) 430
BspFNI CGCG 1 cut(s) 850
BspLI GGNNCC 1 cut(s) 72
BspMAI CTGCAG 1 cut(s) 1815
BspOI GCTAGC 2 cut(s) 473, 2030
BspPI GGATC 1 cut(s) 1115
BspQI GCTCTTC 1 cut(s) 1404
BspT104I TTCGAA 2 cut(s) 49, 2073
BspTI CTTAAG 1 cut(s) 440
BsrDI GCAATG 2 cut(s) 348, 2181
BsrFI RCCGGY 1 cut(s) 1873
BsrGI TGTACA 2 cut(s) 695, 768
BsrI ACTGG 3 cut(s) 26, 970, 2213
BssAI RCCGGY 1 cut(s) 1873
BssECI CCNNGG 4 cut(s) 158, 1464, 1562, 1607
BssMI GATC 5 cut(s) 760, 1114, 1120, 1636, 1690
BssNAI GTATAC 1 cut(s) 2150
BssT1I CCWWGG 1 cut(s) 158
Bst1107I GTATAC 1 cut(s) 2150
Bst2UI CCWGG 2 cut(s) 1074, 1989
Bst4CI ACNGT 5 cut(s) 250, 1669, 1743, 1860, 2068
Bst6I CTCTTC 3 cut(s) 266, 1404, 2070
BstAFI CTTAAG 1 cut(s) 440
BstAPI GCANNNNNTGC 1 cut(s) 1819
BstAUI TGTACA 2 cut(s) 695, 768
BstBAI YACGTR 2 cut(s) 1715, 2227
BstBI TTCGAA 2 cut(s) 49, 2073
BstC8I GCNNGC 3 cut(s) 471, 1555, 2028
BstDEI CTNAG 3 cut(s) 84, 1778, 2232
BstDSI CCRYGG 1 cut(s) 158
BstENI CCTNNNNNAGG 1 cut(s) 1827
BstF5I GGATG 3 cut(s) 1529, 1625, 2149
BstFNI CGCG 1 cut(s) 850
BstKTI GATC 5 cut(s) 763, 1117, 1123, 1639, 1693
BstMAI GTCTC 2 cut(s) 1016, 1875
BstMBI GATC 5 cut(s) 760, 1114, 1120, 1636, 1690
BstMCI CGRYCG 1 cut(s) 1878
BstMWI GCNNNNNNNGC 2 cut(s) 1475, 1819
BstNI CCWGG 2 cut(s) 1074, 1989
BstNSI RCATGY 3 cut(s) 311, 775, 1557
BstSCI CCNGG 3 cut(s) 604, 1072, 1987
BstSFI CTRYAG 1 cut(s) 1811
BstUI CGCG 1 cut(s) 850
BstV1I GCAGC 6 cut(s) 325, 472, 1244, 1534, 1537, 1850
BstX2I RGATCY 2 cut(s) 760, 1120
BstYI RGATCY 2 cut(s) 760, 1120
BstZ17I GTATAC 1 cut(s) 2150
Bsu15I ATCGAT 1 cut(s) 430
BsuI GTATCC 1 cut(s) 1371
BsuRI GGCC 4 cut(s) 318, 498, 1567, 1700
BsuTUI ATCGAT 1 cut(s) 430
BtgI CCRYGG 1 cut(s) 158
BtgZI GCGATG 1 cut(s) 1428
BtsCI GGATG 3 cut(s) 1529, 1625, 2149
BtsI GCAGTG 2 cut(s) 1808, 2037
BtsIMutI CAGTG 7 cut(s) 102, 219, 963, 1586, 1808, 1865, 2037
Cac8I GCNNGC 3 cut(s) 471, 1555, 2028
Cfr10I RCCGGY 1 cut(s) 1873
Cfr13I GGNCC 1 cut(s) 71
ClaI ATCGAT 1 cut(s) 430
Csp6I GTAC 4 cut(s) 619, 696, 769, 2064
CviQI GTAC 4 cut(s) 619, 696, 769, 2064
DdeI CTNAG 3 cut(s) 84, 1778, 2232
DpnI GATC 5 cut(s) 762, 1116, 1122, 1638, 1692
DpnII GATC 5 cut(s) 760, 1114, 1120, 1636, 1690
DraIII CACNNNGTG 1 cut(s) 704
EaeI YGGCCR 2 cut(s) 1565, 1698
Eam1104I CTCTTC 3 cut(s) 266, 1404, 2070
EarI CTCTTC 3 cut(s) 266, 1404, 2070
EciI GGCGGA 1 cut(s) 1000
Ecl136II GAGCTC 1 cut(s) 1397
Eco130I CCWWGG 1 cut(s) 158
Eco147I AGGCCT 1 cut(s) 318
Eco24I GRGCYC 1 cut(s) 1399
Eco47I GGWCC 1 cut(s) 71
Eco53kI GAGCTC 1 cut(s) 1397
Eco57I CTGAAG 2 cut(s) 243, 1082
Eco88I CYCGRG 1 cut(s) 1392
EcoICRI GAGCTC 1 cut(s) 1397
EcoNI CCTNNNNNAGG 1 cut(s) 1827
EcoRI GAATTC 2 cut(s) 1267, 2198
EcoRII CCWGG 2 cut(s) 1072, 1987
EcoT14I CCWWGG 1 cut(s) 158
EcoT22I ATGCAT 2 cut(s) 6, 777
EcoT38I GRGCYC 1 cut(s) 1399
ErhI CCWWGG 1 cut(s) 158
FalI AAGNNNNNCTT 4 cut(s) 868, 900, 1883, 1915
FauI CCCGC 4 cut(s) 520, 664, 1552, 2179
FauNDI CATATG 3 cut(s) 14, 1262, 1695
FbaI TGATCA 1 cut(s) 1114
FblI GTMKAC 2 cut(s) 1583, 2149
Fnu4HI GCNGC 7 cut(s) 339, 486, 1258, 1427, 1548, 1551, 1864
FokI GGATG 3 cut(s) 1516, 1612, 2156
FriOI GRGCYC 1 cut(s) 1399
Fsp4HI GCNGC 7 cut(s) 339, 486, 1258, 1427, 1548, 1551, 1864
FspBI CTAG 6 cut(s) 408, 470, 1214, 1491, 1769, 2027
GluI GCNGC 7 cut(s) 339, 486, 1258, 1427, 1548, 1551, 1864
HaeIII GGCC 4 cut(s) 318, 498, 1567, 1700
HapII CCGG 2 cut(s) 605, 1874
HincII GTYRAC 3 cut(s) 119, 1584, 1998
HindII GTYRAC 3 cut(s) 119, 1584, 1998
HindIII AAGCTT 1 cut(s) 1897
HpaI GTTAAC 1 cut(s) 1998
HpaII CCGG 2 cut(s) 605, 1874
HphI GGTGA 4 cut(s) 238, 299, 1664, 2201
Hpy166II GTNNAC 5 cut(s) 119, 698, 1584, 1998, 2150
Hpy188I TCNGA 7 cut(s) 783, 829, 1062, 1147, 1608, 1880, 2015
Hpy188III TCNNGA 8 cut(s) 182, 561, 737, 876, 1118, 1232, 1736, 1826
Hpy8I GTNNAC 5 cut(s) 119, 698, 1584, 1998, 2150
Hpy99I CGWCG 2 cut(s) 1525, 1585
HpyAV CCTTC 6 cut(s) 739, 1057, 1461, 1506, 1823, 2110
HpyCH4III ACNGT 5 cut(s) 250, 1669, 1743, 1860, 2068
HpyCH4IV ACGT 4 cut(s) 124, 703, 1714, 2226
HpyF10VI GCNNNNNNNGC 2 cut(s) 1475, 1819
HpyF3I CTNAG 3 cut(s) 84, 1778, 2232
HpySE526I ACGT 4 cut(s) 124, 703, 1714, 2226
Ksp22I TGATCA 1 cut(s) 1114
KspAI GTTAAC 1 cut(s) 1998
Kzo9I GATC 5 cut(s) 760, 1114, 1120, 1636, 1690
LguI GCTCTTC 1 cut(s) 1404
LmnI GCTCC 2 cut(s) 482, 607
Lsp1109I GCAGC 6 cut(s) 325, 472, 1244, 1534, 1537, 1850
LweI GCATC 1 cut(s) 1487
MaeI CTAG 6 cut(s) 408, 470, 1214, 1491, 1769, 2027
MaeII ACGT 4 cut(s) 124, 703, 1714, 2226
MaeIII GTNAC 8 cut(s) 844, 1434, 1652, 1674, 1789, 1806, 1970, 2222
MalI GATC 5 cut(s) 762, 1116, 1122, 1638, 1692
MboI GATC 5 cut(s) 760, 1114, 1120, 1636, 1690
MboII GAAGA 9 cut(s) 236, 283, 735, 754, 795, 798, 1391, 1700, 2087
MfeI CAATTG 1 cut(s) 174
MflI RGATCY 2 cut(s) 760, 1120
MhlI GDGCHC 1 cut(s) 1399
MlsI TGGCCA 1 cut(s) 1700
MluNI TGGCCA 1 cut(s) 1700
MlyI GAGTC 6 cut(s) 124, 833, 1286, 1534, 1838, 2230
MmeI TCCRAC 2 cut(s) 1858, 1993
Mox20I TGGCCA 1 cut(s) 1700
Mph1103I ATGCAT 2 cut(s) 6, 777
MscI TGGCCA 1 cut(s) 1700
MseI TTAA 9 cut(s) 261, 321, 362, 441, 972, 1013, 1224, 1997, 2154
Msp20I TGGCCA 1 cut(s) 1700
MspA1I CMGCKG 2 cut(s) 1429, 1547
MspCI CTTAAG 1 cut(s) 440
MspI CCGG 2 cut(s) 605, 1874
MspR9I CCNGG 3 cut(s) 606, 1074, 1989
MunI CAATTG 1 cut(s) 174
Mva1269I GAATGC 3 cut(s) 242, 529, 1007
MvaI CCWGG 2 cut(s) 1074, 1989
MvnI CGCG 1 cut(s) 850
MwoI GCNNNNNNNGC 2 cut(s) 1475, 1819
NciI CCSGG 1 cut(s) 606
NcoI CCATGG 1 cut(s) 158
NdeI CATATG 3 cut(s) 14, 1262, 1695
NdeII GATC 5 cut(s) 760, 1114, 1120, 1636, 1690
NheI GCTAGC 2 cut(s) 469, 2026
NlaIV GGNNCC 1 cut(s) 72
NmeAIII GCCGAG 2 cut(s) 1445, 1543
NmuCI GTSAC 6 cut(s) 1652, 1674, 1789, 1806, 1970, 2222
NsiI ATGCAT 2 cut(s) 6, 777
NspI RCATGY 3 cut(s) 311, 775, 1557
NspV TTCGAA 2 cut(s) 49, 2073
PaeI GCATGC 1 cut(s) 1557
PaeR7I CTCGAG 1 cut(s) 1392
PceI AGGCCT 1 cut(s) 318
PciSI GCTCTTC 1 cut(s) 1404
PctI GAATGC 3 cut(s) 242, 529, 1007
PfeI GAWTC 4 cut(s) 227, 800, 866, 1833
PflFI GACNNNGTC 1 cut(s) 1486
PflMI CCANNNNNTGG 1 cut(s) 965
PfoI TCCNGGA 2 cut(s) 604, 1987
PkrI GCNGC 7 cut(s) 340, 487, 1259, 1428, 1549, 1552, 1865
PleI GAGTC 6 cut(s) 123, 832, 1286, 1534, 1838, 2229
PpsI GAGTC 6 cut(s) 123, 832, 1286, 1534, 1838, 2229
Ppu21I YACGTR 2 cut(s) 1715, 2227
Psp124BI GAGCTC 1 cut(s) 1399
Psp6I CCWGG 2 cut(s) 1072, 1987
PspGI CCWGG 2 cut(s) 1072, 1987
PspN4I GGNNCC 1 cut(s) 72
PspPI GGNCC 1 cut(s) 71
PspXI VCTCGAGB 1 cut(s) 1392
PstI CTGCAG 1 cut(s) 1815
PsuI RGATCY 2 cut(s) 760, 1120
PsyI GACNNNGTC 1 cut(s) 1486
RsaI GTAC 4 cut(s) 620, 697, 770, 2065
RsaNI GTAC 4 cut(s) 619, 696, 769, 2064
SacI GAGCTC 1 cut(s) 1399
SalI GTCGAC 1 cut(s) 1582
SapI GCTCTTC 1 cut(s) 1404
SaqAI TTAA 9 cut(s) 261, 321, 362, 441, 972, 1013, 1224, 1997, 2154
SatI GCNGC 7 cut(s) 339, 486, 1258, 1427, 1548, 1551, 1864
Sau3AI GATC 5 cut(s) 760, 1114, 1120, 1636, 1690
Sau96I GGNCC 1 cut(s) 71
ScaI AGTACT 1 cut(s) 620
SchI GAGTC 6 cut(s) 124, 833, 1286, 1534, 1838, 2230
ScrFI CCNGG 3 cut(s) 606, 1074, 1989
SduI GDGCHC 1 cut(s) 1399
SfaNI GCATC 1 cut(s) 1487
SfcI CTRYAG 1 cut(s) 1811
Sfr274I CTCGAG 1 cut(s) 1392
SfuI TTCGAA 2 cut(s) 49, 2073
SinI GGWCC 1 cut(s) 71
SlaI CTCGAG 1 cut(s) 1392
SmlI CTYRAG 2 cut(s) 440, 1392
SmoI CTYRAG 2 cut(s) 440, 1392
SphI GCATGC 1 cut(s) 1557
SseBI AGGCCT 1 cut(s) 318
SsiI CCGC 7 cut(s) 527, 671, 850, 985, 1427, 1545, 2186
SspI AATATT 4 cut(s) 170, 655, 688, 1648
SspMI CTAG 6 cut(s) 408, 470, 1214, 1491, 1769, 2027
SstI GAGCTC 1 cut(s) 1399
StuI AGGCCT 1 cut(s) 318
StyD4I CCNGG 3 cut(s) 604, 1072, 1987
StyI CCWWGG 1 cut(s) 158
TaaI ACNGT 5 cut(s) 250, 1669, 1743, 1860, 2068
TaiI ACGT 4 cut(s) 127, 706, 1717, 2229
TaqI TCGA 7 cut(s) 49, 430, 1393, 1481, 1583, 1836, 2073
TatI WGTACW 3 cut(s) 618, 695, 768
TauI GCSGC 1 cut(s) 1429
TfiI GAWTC 4 cut(s) 227, 800, 866, 1833
Tru1I TTAA 9 cut(s) 261, 321, 362, 441, 972, 1013, 1224, 1997, 2154
Tru9I TTAA 9 cut(s) 261, 321, 362, 441, 972, 1013, 1224, 1997, 2154
TscAI CASTG 7 cut(s) 109, 226, 970, 1593, 1815, 1865, 2037
TseFI GTSAC 6 cut(s) 1652, 1674, 1789, 1806, 1970, 2222
TseI GCWGC 6 cut(s) 338, 485, 1257, 1547, 1550, 1863
Tsp45I GTSAC 6 cut(s) 1652, 1674, 1789, 1806, 1970, 2222
TspRI CASTG 7 cut(s) 109, 226, 970, 1593, 1815, 1865, 2037
Tth111I GACNNNGTC 1 cut(s) 1486
Van91I CCANNNNNTGG 1 cut(s) 965
Vha464I CTTAAG 1 cut(s) 440
VpaK11BI GGWCC 1 cut(s) 71
XagI CCTNNNNNAGG 1 cut(s) 1827
XapI RAATTY 5 cut(s) 92, 1055, 1267, 1362, 2198
XceI RCATGY 3 cut(s) 311, 775, 1557
XhoI CTCGAG 1 cut(s) 1392
XmiI GTMKAC 2 cut(s) 1583, 2149
XspI CTAG 6 cut(s) 408, 470, 1214, 1491, 1769, 2027
ZrmI AGTACT 1 cut(s) 620
Zsp2I ATGCAT 2 cut(s) 6, 777
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.