Rmu_sc0000365.1_g000062

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000365.1
OG0000164
Physical Location & Seq
Reverse (-)
274904 .. 278936
4033 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000365.1_g000062.1.cds

Sequence Viewer

Length: 2070 bp
atgctcgtatcgacgagtagatcgaactcaggaatagaaactatccctgaggtggccggaaaccgccggaaaacaccaccatcgtggcggcaccgccaccggaccaaaccgctttggaagaagcatcaacgtcctatgggcttcaaaagccctcaagaatcaccggcaaaggtggccggaatctccgactccgatcaaggcgatttcatccctgaagcatccacttccagtcgatgtaactccctccacggctcgaatctccctccacgacgccggcgaagtggaggccgcgcgcgggctcgggagagggctgggtttccgtttttggaaatctggccttctttgcaatttccggacaatttcaatagatatgcaaaagaagcagggtttagtattagaagtcattctaatgtgactagcaaagataagaaacaacttatgaggaaggagtatgtttgttataagcaaggagattccaaagttgaaagagaaaagcgtaagagaggattaccaaaagtgggttgtaaagcgagaattgcagttgtgagaaagaaggagtctggaagatttgcaatctctgtatttgttgaggctcacaaccatccattaacaagcccgcctagagtaggtggcattcaaaatattggttttatacagtgtgatctatataattatggaagaacttgtcgtgaagagaagaaggggcgtgatggagatctactgtacatgcattttgagaatgagaaagaaaaagattcttcttttgtctatacaatggatggagatgaggaaaacagagtaacacggtgcttttgggctgactcaatttcaagacgagcttatagcttttatggagatgtagttatctttgatactacatgcaacacaaatcggtatggaatgatttttccaccattcactggtgttaacaatcatgggcaggcaatcatctttgcttgtgcattcttgaatgatgagacagccgatacttttgtttggttattcaaggaatttctaaatgctatgccaggagatgcactagaaaatgaccccaagatgatcattaccgaccaagatcctgctatgactaaagccatttcagaagcactcccacaaacatttcatagatattgcagttggcacattcttaataaattttctgagaagttagacgcgattaaattcgggattcctaccaagactttcatagttgcatatggaattcaagtagtagagaggagtttgactcaagatggattgaaattattgagaagagtggctggaatgtcaagtagtcaaagagcagagagtcaacattctttcttcaagaattatgtttctaagtggaattcattagtggaatttatggttcagtttaaaaggggacttcttcaccaacgacattatgagttagaggagaatcatattaatattgatgagaaggcaaaaactgtcatgtcccttgacatagaagatcatatggccaaggtttatacacgtaaactatttgatgaagttcaaaaacagttgagagagagcttcaaatataaacttgaacttgtgtttgaaaatgtcactcaagaacaatttaaggttatacgaaagaacattgatacttgtaagtctcgtgaacttacttatgaaaagaaatctgattttgcatcatgcagctgtagaatgtttgacagtcaaggtttcccatgtcggcatgttttggcatatttgattaagatccaagatgttgataaattgcctattcaatacattttgaagagatggactaaggctgcaagacatagagttgtgttagattgtaatggaatggagataaaagataacaaagctttacttgcaaggaggactaaactattccagcatgctacatatgcaattgataaggttatggtgagtgatgaggctaccaagctgtttatggaagcattggatgcttttttggagaatattaaacaaactgcagtagatttggagatcgagaccaacaatgctactattcggcatgtttttaatgaaccacatcaagtgagagcaattaaaagggtgtgggagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

689

Amino Acids

79.81

Weight (kDa)

9.41

Isoelectric Point (pI)

48.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000164)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02320 FvH4_1g21472 FvH4_2g00813 FvH4_2g02512 FvH4_2g03921 FvH4_2g23460 FvH4_3g29141 FvH4_4g05791 FvH4_4g06321 FvH4_4g15595 FvH4_4g18162 FvH4_4g18163 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_5g31093 FvH4_6g01982 FvH4_6g21931 FvH4_6g44691 FvH4_6g48541
prunus_persica Prupe.1G074100_v2.0.a1 Prupe.3G021400_v2.0.a1
pyrus_communis pycom02g18570 pycom14g00670
rosa_chinensis RchiOBHm_Chr1g0379201 RchiOBHm_Chr1g0379361 RchiOBHm_Chr4g0405981 RchiOBHm_Chr5g0073641 RchiOBHm_Chr5g0073651 RchiOBHm_Chr7g0236661
rosa_multiflora Rmu_co8179562.1_g000001 Rmu_co8343647.1_g000001 Rmu_sc0000041.1_g000017 Rmu_sc0000114.1_g000020 Rmu_sc0000286.1_g000006 Rmu_sc0000308.1_g000038 Rmu_sc0000365.1_g000061 Rmu_sc0000365.1_g000062 Rmu_sc0000538.1_g000060 Rmu_sc0000538.1_g000061 Rmu_sc0000586.1_g000016 Rmu_sc0000898.1_g000007 Rmu_sc0000913.1_g000003 Rmu_sc0000913.1_g000004 Rmu_sc0000996.1_g000006 Rmu_sc0000996.1_g000007 Rmu_sc0000998.1_g000003 Rmu_sc0001350.1_g000009 Rmu_sc0002079.1_g000009 Rmu_sc0002200.1_g000013 Rmu_sc0002226.1_g000025 Rmu_sc0002279.1_g000014 Rmu_sc0002478.1_g000014 Rmu_sc0002717.1_g000004 Rmu_sc0002868.1_g000027 Rmu_sc0002889.1_g000043 Rmu_sc0003023.1_g000001 Rmu_sc0003110.1_g000006 Rmu_sc0003226.1_g000028 Rmu_sc0003226.1_g000029 Rmu_sc0003337.1_g000053 Rmu_sc0003558.1_g000007 Rmu_sc0004345.1_g000014 Rmu_sc0004383.1_g000007 Rmu_sc0004888.1_g000021 Rmu_sc0005114.1_g000012 Rmu_sc0005223.1_g000019 Rmu_sc0005223.1_g000020 Rmu_sc0005639.1_g000025 Rmu_sc0005685.1_g000027 Rmu_sc0005992.1_g000002 Rmu_sc0006326.1_g000034 Rmu_sc0006326.1_g000035 Rmu_sc0007390.1_g000012 Rmu_sc0007451.1_g000006 Rmu_sc0007825.1_g000003 Rmu_sc0008600.1_g000023 Rmu_sc0009291.1_g000003 Rmu_sc0012046.1_g000001 Rmu_sc0012046.1_g000002 Rmu_sc0012710.1_g000001 Rmu_sc0015238.1_g000001 Rmu_sc0016125.1_g000003 Rmu_sc0016175.1_g000001 Rmu_sc0016898.1_g000001 Rmu_sc0017323.1_g000010 Rmu_sc0017874.1_g000002 Rmu_sc0019167.1_g000001 Rmu_sc0020815.1_g000006 Rmu_sc0025564.1_g000001 Rmu_sc0026418.1_g000001 Rmu_sc0035188.1_g000002 Rmu_sc0039254.1_g000001 Rmu_ssc0000120.1_g000015 Rmu_ssc0000120.1_g000016 Rmu_ssc0000330.1_g000023 Rmu_ssc0000433.1_g000004
rosa_roxburghii Rroxscaffold_1G00047130 Rroxscaffold_1G00051320 Rroxscaffold_1G00056600 Rroxscaffold_2G00109650 Rroxscaffold_2G00119980 Rroxscaffold_3G00222550 Rroxscaffold_3G00224980 Rroxscaffold_3G00251020 Rroxscaffold_6G00411190 Rroxscaffold_7G00166520 Rroxscaffold_7G00172920 Rroxscaffold_7G00191860 Rroxscaffold_7G00194430
rosa_rugosa Rorug01G0198900 Rorug01G0217300 Rorug01G0244500 Rorug02G0147400 Rorug02G0152200 Rorug02G0595500 Rorug02G0595600 Rorug03G0060500 Rorug03G0203000 Rorug03G0285800 Rorug04G0027200 Rorug04G0027300 Rorug04G0225800 Rorug05G0073400 Rorug05G0213300 Rorug05G0324600 Rorug05G0390900 Rorug05G0391000 Rorug05G0391100 Rorug05G0391200 Rorug05G0462900 Rorug05G0473000 Rorug06G0256500 Rorug07G0199000 Rorug07G0208800 Rorug07G0208800 Rorug07G0316600 Rorug07G0316700
rosa_samantha Rh2BG532400 Rh2CG581900 Rh3CG322600 Rh6AG079900 Rh6AG250800 Rh6AG496300 Rh6BG506100 Rh6CG126000 Rh6CG511700 Rh6DG109400 Rh6DG112700 Rh7CG104500 Rh7CG322000 Rh7CG431500
rosa_wichuraiana Rw0G020410 Rw1G009190 Rw1G014580 Rw1G021000 Rw1G022190 Rw2G025900 Rw2G029920 Rw2G037530 Rw3G018560 Rw3G020560 Rw4G008500 Rw4G022520 Rw5G019030 Rw5G031180 Rw5G044830 Rw6G005010 Rw6G006890 Rw6G011330 Rw6G011380 Rw6G023900 Rw7G028490 Rw7G030170 Rw7G030370 Rw7G032030 Rw7G032040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 462
AccB1I GGYRCC 1 cut(s) 90
AccB7I CCANNNNNTGG 1 cut(s) 920
AccII CGCG 4 cut(s) 291, 293, 295, 1175
AccIII TCCGGA 1 cut(s) 352
AciI CCGC 7 cut(s) 64, 88, 94, 110, 289, 295, 617
AclWI GGATC 2 cut(s) 1070, 1726
AcoI YGGCCR 3 cut(s) 54, 174, 1482
AcsI RAATTY 6 cut(s) 1010, 1154, 1181, 1221, 1348, 1361
AcuI CTGAAG 1 cut(s) 234
AcyI GRCGYC 1 cut(s) 271
AfaI GTAC 1 cut(s) 725
AfiI CCNNNNNNNGG 5 cut(s) 52, 295, 518, 626, 920
AflIII ACRYGT 1 cut(s) 1496
AjnI CCWGG 1 cut(s) 1027
AleI CACNNNNGTG 1 cut(s) 82
AluBI AGCT 6 cut(s) 839, 846, 1539, 1671, 1844, 1927
AluI AGCT 6 cut(s) 839, 846, 1539, 1671, 1844, 1927
Alw26I GTCTC 3 cut(s) 971, 1629, 1988
AlwI GGATC 2 cut(s) 1070, 1726
Ama87I CYCGRG 1 cut(s) 300
Aor13HI TCCGGA 1 cut(s) 352
AoxI GGCC 5 cut(s) 54, 174, 286, 335, 1482
ApeKI GCWGC 2 cut(s) 1668, 1787
ApoI RAATTY 6 cut(s) 1010, 1154, 1181, 1221, 1348, 1361
AseI ATTAAT 1 cut(s) 1428
Asp700I GAANNNNTTC 1 cut(s) 403
AspLEI GCGC 2 cut(s) 293, 295
AspS9I GGNCC 1 cut(s) 102
AsuHPI GGTGA 3 cut(s) 153, 1385, 1918
AvaI CYCGRG 1 cut(s) 300
AvaII GGWCC 1 cut(s) 102
AxyI CCTNAGG 1 cut(s) 48
BaeI ACNNNNGTAYC 2 cut(s) 978, 1011
BalI TGGCCA 1 cut(s) 1484
BanI GGYRCC 1 cut(s) 90
BanII GRGCYC 1 cut(s) 301
BauI CACGAG 1 cut(s) 1626
BbvI GCAGC 2 cut(s) 1680, 1774
BccI CCATC 6 cut(s) 88, 609, 704, 773, 1247, 1770
BceAI ACGGC 1 cut(s) 265
BciT130I CCWGG 1 cut(s) 1029
BclI TGATCA 1 cut(s) 1059
BcoDI GTCTC 3 cut(s) 971, 1629, 1988
BfaI CTAG 3 cut(s) 417, 621, 1040
BfmI CTRYAG 2 cut(s) 1672, 1974
BglII AGATCT 1 cut(s) 715
BisI GCNGC 4 cut(s) 89, 289, 1669, 1788
BlsI GCNGC 4 cut(s) 90, 290, 1670, 1789
Bme1390I CCNGG 1 cut(s) 1029
Bme18I GGWCC 1 cut(s) 102
BmeT110I CYCGRG 1 cut(s) 300
BmgT120I GGNCC 1 cut(s) 102
BmiI GGNNCC 1 cut(s) 92
BmrFI CCNGG 1 cut(s) 1029
BmsI GCATC 5 cut(s) 133, 227, 1024, 1670, 1936
BplI GAGNNNNNCTC 2 cut(s) 1231, 1263
BpuEI CTTGAG 3 cut(s) 138, 1233, 1563
BsaAI YACGTR 1 cut(s) 1499
BsaBI GATNNNNATC 2 cut(s) 714, 1730
BsaHI GRCGYC 1 cut(s) 271
BsaI GGTCTC 1 cut(s) 1988
BsaJI CCNNGG 2 cut(s) 247, 1485
BsaWI WCCGGW 2 cut(s) 99, 352
BsaXI ACNNNNNCTCC 2 cut(s) 846, 876
Bsc4I CCNNNNNNNGG 5 cut(s) 52, 295, 518, 626, 920
Bse118I RCCGGY 2 cut(s) 163, 273
Bse1I ACTGG 2 cut(s) 228, 925
Bse21I CCTNAGG 1 cut(s) 48
Bse8I GATNNNNATC 2 cut(s) 714, 1730
BseAI TCCGGA 1 cut(s) 352
BseBI CCWGG 1 cut(s) 1029
BseDI CCNNGG 2 cut(s) 247, 1485
BseGI GGATG 5 cut(s) 207, 218, 601, 784, 1951
BseJI GATNNNNATC 2 cut(s) 714, 1730
BseLI CCNNNNNNNGG 5 cut(s) 52, 295, 518, 626, 920
BseMII CTCAG 3 cut(s) 39, 42, 1152
BseNI ACTGG 2 cut(s) 228, 925
BsePI GCGCGC 1 cut(s) 291
BseRI GAGGAG 2 cut(s) 1252, 1430
BseXI GCAGC 2 cut(s) 1680, 1774
BseYI CCCAGC 1 cut(s) 311
Bsh1236I CGCG 4 cut(s) 291, 293, 295, 1175
BshFI GGCC 5 cut(s) 56, 176, 288, 337, 1484
BshNI GGYRCC 1 cut(s) 90
BsiHKCI CYCGRG 1 cut(s) 300
BsiSI CCGG 7 cut(s) 57, 67, 100, 164, 177, 274, 353
BslFI GGGAC 2 cut(s) 1398, 1444
BslI CCNNNNNNNGG 5 cut(s) 52, 295, 518, 626, 920
BsmAI GTCTC 3 cut(s) 971, 1629, 1988
BsmFI GGGAC 2 cut(s) 1398, 1444
BsmI GAATGC 2 cut(s) 633, 962
BsnI GGCC 5 cut(s) 56, 176, 288, 337, 1484
Bso31I GGTCTC 1 cut(s) 1988
BsoBI CYCGRG 1 cut(s) 300
Bsp1286I GDGCHC 1 cut(s) 301
Bsp13I TCCGGA 1 cut(s) 352
Bsp1407I TGTACA 1 cut(s) 723
Bsp143I GATC 9 cut(s) 20, 193, 661, 715, 1059, 1075, 1474, 1731, 1989
BspACI CCGC 7 cut(s) 64, 88, 94, 110, 289, 295, 617
BspANI GGCC 5 cut(s) 56, 176, 288, 337, 1484
BspCNI CTCAG 3 cut(s) 40, 41, 1153
BspEI TCCGGA 1 cut(s) 352
BspFNI CGCG 4 cut(s) 291, 293, 295, 1175
BspLI GGNNCC 1 cut(s) 92
BspMAI CTGCAG 1 cut(s) 1978
BspPI GGATC 2 cut(s) 1070, 1726
BspT107I GGYRCC 1 cut(s) 90
BspTNI GGTCTC 1 cut(s) 1988
BsrFI RCCGGY 2 cut(s) 163, 273
BsrGI TGTACA 1 cut(s) 723
BsrI ACTGG 2 cut(s) 228, 925
BssAI RCCGGY 2 cut(s) 163, 273
BssECI CCNNGG 2 cut(s) 247, 1485
BssHII GCGCGC 1 cut(s) 291
BssMI GATC 9 cut(s) 20, 193, 661, 715, 1059, 1075, 1474, 1731, 1989
BssNI GRCGYC 1 cut(s) 271
BssSI CACGAG 1 cut(s) 1626
BssT1I CCWWGG 1 cut(s) 1485
Bst2BI CACGAG 1 cut(s) 1626
Bst2UI CCWGG 1 cut(s) 1029
Bst4CI ACNGT 6 cut(s) 657, 723, 807, 1453, 1527, 1688
Bst6I CTCTTC 3 cut(s) 687, 1267, 1766
BstACI GRCGYC 1 cut(s) 271
BstAPI GCANNNNNTGC 1 cut(s) 1946
BstAUI TGTACA 1 cut(s) 723
BstBAI YACGTR 1 cut(s) 1499
BstC8I GCNNGC 6 cut(s) 275, 293, 297, 617, 942, 1878
BstDEI CTNAG 5 cut(s) 28, 48, 1161, 1341, 1782
BstDSI CCRYGG 1 cut(s) 247
BstENI CCTNNNNNAGG 1 cut(s) 624
BstF5I GGATG 5 cut(s) 207, 218, 601, 784, 1951
BstFNI CGCG 4 cut(s) 291, 293, 295, 1175
BstHHI GCGC 2 cut(s) 293, 295
BstKTI GATC 9 cut(s) 23, 196, 664, 718, 1062, 1078, 1477, 1734, 1992
BstMAI GTCTC 3 cut(s) 971, 1629, 1988
BstMBI GATC 9 cut(s) 20, 193, 661, 715, 1059, 1075, 1474, 1731, 1989
BstMWI GCNNNNNNNGC 8 cut(s) 147, 173, 343, 380, 536, 1850, 1886, 1946
BstNI CCWGG 1 cut(s) 1029
BstNSI RCATGY 5 cut(s) 730, 882, 1712, 1880, 2021
BstSCI CCNGG 1 cut(s) 1027
BstSFI CTRYAG 2 cut(s) 1672, 1974
BstUI CGCG 4 cut(s) 291, 293, 295, 1175
BstV1I GCAGC 2 cut(s) 1680, 1774
BstX2I RGATCY 3 cut(s) 715, 1075, 1731
BstXI CCANNNNNNTGG 1 cut(s) 84
BstYI RGATCY 3 cut(s) 715, 1075, 1731
Bsu36I CCTNAGG 1 cut(s) 48
BsuRI GGCC 5 cut(s) 56, 176, 288, 337, 1484
BtgI CCRYGG 1 cut(s) 247
BtsCI GGATG 5 cut(s) 207, 218, 601, 784, 1951
BtsIMutI CAGTG 2 cut(s) 662, 918
Cac8I GCNNGC 6 cut(s) 275, 293, 297, 617, 942, 1878
CfoI GCGC 2 cut(s) 293, 295
Cfr10I RCCGGY 2 cut(s) 163, 273
Cfr13I GGNCC 1 cut(s) 102
CseI GACGC 2 cut(s) 279, 1181
Csp6I GTAC 1 cut(s) 724
CviAII CATG 9 cut(s) 727, 879, 935, 1456, 1665, 1701, 1709, 1877, 2018
CviQI GTAC 1 cut(s) 724
DdeI CTNAG 5 cut(s) 28, 48, 1161, 1341, 1782
DpnI GATC 9 cut(s) 22, 195, 663, 717, 1061, 1077, 1476, 1733, 1991
DpnII GATC 9 cut(s) 20, 193, 661, 715, 1059, 1075, 1474, 1731, 1989
DraI TTTAAA 1 cut(s) 1378
EaeI YGGCCR 3 cut(s) 54, 174, 1482
Eam1104I CTCTTC 3 cut(s) 687, 1267, 1766
EarI CTCTTC 3 cut(s) 687, 1267, 1766
Eco130I CCWWGG 1 cut(s) 1485
Eco24I GRGCYC 1 cut(s) 301
Eco31I GGTCTC 1 cut(s) 1988
Eco47I GGWCC 1 cut(s) 102
Eco57I CTGAAG 1 cut(s) 234
Eco81I CCTNAGG 1 cut(s) 48
Eco88I CYCGRG 1 cut(s) 300
EcoNI CCTNNNNNAGG 1 cut(s) 624
EcoRI GAATTC 2 cut(s) 1221, 1348
EcoRII CCWGG 1 cut(s) 1027
EcoT14I CCWWGG 1 cut(s) 1485
EcoT22I ATGCAT 1 cut(s) 732
EcoT38I GRGCYC 1 cut(s) 301
ErhI CCWWGG 1 cut(s) 1485
FaeI CATG 9 cut(s) 730, 882, 938, 1459, 1668, 1704, 1712, 1880, 2021
FalI AAGNNNNNCTT 4 cut(s) 823, 855, 1833, 1865
FaqI GGGAC 2 cut(s) 1398, 1444
FatI CATG 9 cut(s) 726, 878, 934, 1455, 1664, 1700, 1708, 1876, 2017
FauI CCCGC 2 cut(s) 288, 624
FauNDI CATATG 3 cut(s) 1216, 1479, 1885
FbaI TGATCA 1 cut(s) 1059
Fnu4HI GCNGC 4 cut(s) 89, 289, 1669, 1788
FokI GGATG 5 cut(s) 194, 205, 588, 791, 1958
FriOI GRGCYC 1 cut(s) 301
Fsp4HI GCNGC 4 cut(s) 89, 289, 1669, 1788
FspBI CTAG 3 cut(s) 417, 621, 1040
GlaI GCGC 2 cut(s) 292, 294
GluI GCNGC 4 cut(s) 89, 289, 1669, 1788
GsaI CCCAGC 1 cut(s) 315
HaeIII GGCC 5 cut(s) 56, 176, 288, 337, 1484
HapII CCGG 7 cut(s) 57, 67, 100, 164, 177, 274, 353
HgaI GACGC 2 cut(s) 279, 1181
HhaI GCGC 2 cut(s) 293, 295
Hin1I GRCGYC 1 cut(s) 271
Hin1II CATG 9 cut(s) 730, 882, 938, 1459, 1668, 1704, 1712, 1880, 2021
Hin6I GCGC 2 cut(s) 291, 293
HinP1I GCGC 2 cut(s) 291, 293
HincII GTYRAC 2 cut(s) 928, 1313
HindII GTYRAC 2 cut(s) 928, 1313
HindIII AAGCTT 1 cut(s) 1842
HpaI GTTAAC 1 cut(s) 928
HpaII CCGG 7 cut(s) 57, 67, 100, 164, 177, 274, 353
HphI GGTGA 3 cut(s) 153, 1385, 1918
Hpy166II GTNNAC 4 cut(s) 928, 1313, 1502, 1631
Hpy188I TCNGA 5 cut(s) 187, 193, 1102, 1162, 1654
Hpy8I GTNNAC 4 cut(s) 928, 1313, 1502, 1631
Hpy99I CGWCG 2 cut(s) 16, 273
HpyAV CCTTC 5 cut(s) 348, 439, 547, 694, 1435
HpyCH4III ACNGT 6 cut(s) 657, 723, 807, 1453, 1527, 1688
HpyCH4IV ACGT 2 cut(s) 130, 1498
HpyF10VI GCNNNNNNNGC 8 cut(s) 147, 173, 343, 380, 536, 1850, 1886, 1946
HpyF3I CTNAG 5 cut(s) 28, 48, 1161, 1341, 1782
HpySE526I ACGT 2 cut(s) 130, 1498
Hsp92I GRCGYC 1 cut(s) 271
Hsp92II CATG 9 cut(s) 730, 882, 938, 1459, 1668, 1704, 1712, 1880, 2021
HspAI GCGC 2 cut(s) 291, 293
Kpn2I TCCGGA 1 cut(s) 352
KroI GCCGGC 1 cut(s) 273
KroNI GCCGGC 1 cut(s) 275
Ksp22I TGATCA 1 cut(s) 1059
KspAI GTTAAC 1 cut(s) 928
Kzo9I GATC 9 cut(s) 20, 193, 661, 715, 1059, 1075, 1474, 1731, 1989
Lsp1109I GCAGC 2 cut(s) 1680, 1774
LweI GCATC 5 cut(s) 133, 227, 1024, 1670, 1936
MaeI CTAG 3 cut(s) 417, 621, 1040
MaeII ACGT 2 cut(s) 130, 1498
MaeIII GTNAC 4 cut(s) 236, 412, 799, 1573
MalI GATC 9 cut(s) 22, 195, 663, 717, 1061, 1077, 1476, 1733, 1991
MauBI CGCGCGCG 1 cut(s) 291
MboI GATC 9 cut(s) 20, 193, 661, 715, 1059, 1075, 1474, 1731, 1989
MfeI CAATTG 1 cut(s) 1890
MflI RGATCY 3 cut(s) 715, 1075, 1731
MhlI GDGCHC 1 cut(s) 301
MlsI TGGCCA 1 cut(s) 1484
MluNI TGGCCA 1 cut(s) 1484
MlyI GAGTC 5 cut(s) 182, 566, 815, 1240, 1318
MmeI TCCRAC 1 cut(s) 210
Mox20I TGGCCA 1 cut(s) 1484
Mph1103I ATGCAT 1 cut(s) 732
MreI CGCCGGCG 1 cut(s) 273
MroI TCCGGA 1 cut(s) 352
MroNI GCCGGC 1 cut(s) 273
MroXI GAANNNNTTC 1 cut(s) 403
MscI TGGCCA 1 cut(s) 1484
MslI CAYNNNNRTG 2 cut(s) 82, 408
Msp20I TGGCCA 1 cut(s) 1484
MspA1I CMGCKG 1 cut(s) 1671
MspI CCGG 7 cut(s) 57, 67, 100, 164, 177, 274, 353
MspR9I CCNGG 1 cut(s) 1029
MunI CAATTG 1 cut(s) 1890
Mva1269I GAATGC 2 cut(s) 633, 962
MvaI CCWGG 1 cut(s) 1029
MvnI CGCG 4 cut(s) 291, 293, 295, 1175
MwoI GCNNNNNNNGC 8 cut(s) 147, 173, 343, 380, 536, 1850, 1886, 1946
NaeI GCCGGC 1 cut(s) 275
NdeI CATATG 3 cut(s) 1216, 1479, 1885
NdeII GATC 9 cut(s) 20, 193, 661, 715, 1059, 1075, 1474, 1731, 1989
NgoMIV GCCGGC 1 cut(s) 273
NlaIII CATG 9 cut(s) 730, 882, 938, 1459, 1668, 1704, 1712, 1880, 2021
NlaIV GGNNCC 1 cut(s) 92
NmuCI GTSAC 2 cut(s) 412, 1573
NsiI ATGCAT 1 cut(s) 732
NspI RCATGY 5 cut(s) 730, 882, 1712, 1880, 2021
OliI CACNNNNGTG 1 cut(s) 82
PaeI GCATGC 1 cut(s) 1880
PauI GCGCGC 1 cut(s) 291
PcsI WCGNNNNNNNCGW 2 cut(s) 20, 274
PctI GAATGC 2 cut(s) 633, 962
PdiI GCCGGC 1 cut(s) 275
PdmI GAANNNNTTC 1 cut(s) 403
PfeI GAWTC 7 cut(s) 158, 180, 256, 473, 755, 1189, 1420
PflMI CCANNNNNTGG 1 cut(s) 920
PkrI GCNGC 4 cut(s) 90, 290, 1670, 1789
PleI GAGTC 5 cut(s) 182, 565, 815, 1240, 1317
PpsI GAGTC 5 cut(s) 182, 565, 815, 1240, 1317
Ppu21I YACGTR 1 cut(s) 1499
PshBI ATTAAT 1 cut(s) 1428
PsiI TTATAA 1 cut(s) 462
Psp6I CCWGG 1 cut(s) 1027
PspFI CCCAGC 1 cut(s) 311
PspGI CCWGG 1 cut(s) 1027
PspN4I GGNNCC 1 cut(s) 92
PspPI GGNCC 1 cut(s) 102
PstI CTGCAG 1 cut(s) 1978
PsuI RGATCY 3 cut(s) 715, 1075, 1731
PteI GCGCGC 1 cut(s) 291
PvuII CAGCTG 1 cut(s) 1671
RsaI GTAC 1 cut(s) 725
RsaNI GTAC 1 cut(s) 724
RseI CAYNNNNRTG 2 cut(s) 82, 408
SatI GCNGC 4 cut(s) 89, 289, 1669, 1788
Sau3AI GATC 9 cut(s) 20, 193, 661, 715, 1059, 1075, 1474, 1731, 1989
Sau96I GGNCC 1 cut(s) 102
SchI GAGTC 5 cut(s) 182, 566, 815, 1240, 1318
ScrFI CCNGG 1 cut(s) 1029
SduI GDGCHC 1 cut(s) 301
SfaNI GCATC 5 cut(s) 133, 227, 1024, 1670, 1936
SfcI CTRYAG 2 cut(s) 1672, 1974
SgrAI CRCCGGYG 1 cut(s) 273
SinI GGWCC 1 cut(s) 102
SmiMI CAYNNNNRTG 2 cut(s) 82, 408
SmlI CTYRAG 3 cut(s) 153, 1248, 1578
SmoI CTYRAG 3 cut(s) 153, 1248, 1578
SphI GCATGC 1 cut(s) 1880
SsiI CCGC 7 cut(s) 64, 88, 94, 110, 289, 295, 617
SspI AATATT 3 cut(s) 643, 1432, 1963
SspMI CTAG 3 cut(s) 417, 621, 1040
StyD4I CCNGG 1 cut(s) 1027
StyI CCWWGG 1 cut(s) 1485
TaaI ACNGT 6 cut(s) 657, 723, 807, 1453, 1527, 1688
TaiI ACGT 2 cut(s) 133, 1501
TaqI TCGA 5 cut(s) 11, 23, 232, 254, 1992
TatI WGTACW 1 cut(s) 723
TauI GCSGC 2 cut(s) 91, 291
TfiI GAWTC 7 cut(s) 158, 180, 256, 473, 755, 1189, 1420
TscAI CASTG 2 cut(s) 662, 925
TseFI GTSAC 2 cut(s) 412, 1573
TseI GCWGC 2 cut(s) 1668, 1787
Tsp45I GTSAC 2 cut(s) 412, 1573
TspDTI ATGAA 7 cut(s) 196, 1112, 1195, 1341, 1527, 1656, 2043
TspGWI ACGGA 1 cut(s) 309
TspRI CASTG 2 cut(s) 662, 925
Van91I CCANNNNNTGG 1 cut(s) 920
VpaK11BI GGWCC 1 cut(s) 102
VspI ATTAAT 1 cut(s) 1428
XagI CCTNNNNNAGG 1 cut(s) 624
XapI RAATTY 6 cut(s) 1010, 1154, 1181, 1221, 1348, 1361
XceI RCATGY 5 cut(s) 730, 882, 1712, 1880, 2021
XcmI CCANNNNNNNNNTGG 1 cut(s) 1930
XmnI GAANNNNTTC 1 cut(s) 403
XspI CTAG 3 cut(s) 417, 621, 1040
Zsp2I ATGCAT 1 cut(s) 732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.