pycom14g00670

Protein FAR1-RELATED SEQUENCE 5-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
440876 .. 441489
614 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g00670.2

Sequence Viewer

Length: 555 bp
ATGCTTGGGGACTTGGGTATTTATAGCAAACCAAATGAAAGCTACACCACACACTTAATTAAACTAAGTTTATTCACTACCACACAAAACACATTAATTGCACCTAATTATGTTGTTTTCCACACAACCTTACCTAACTTTGCAATTGTAAGCAATTACATCATCAAACTAGATATGGACTTGGGCTTTAGATTGGGTTGTGGATTACTTATTGTTTTGGTCATTCTAAATGATGAGACAAGTAAACTATTTTGTGAGGCGATGGATACTATGAATGAGAAGATTAGGCCATTGGTTGGTGGTACCAATGAAAATATGGAACCTCCTGCAACCAAAGGAGATATGGAATGTCATGCAAAAAGAAAATCGATAGTAGATGATGTTGGTTTTCTTGAACCTGATCATGTTAAGACCAAAGGATCTAGAAAGAGACTTAAAAAGGGAAAAGAGAAAGGAAAATGCAAGAAGAGGGTTAATGGTAACCTTCGTCATGGGTGTGGGCAATATGGAGTTAATCATGACAAAAGAAATTGTCCGAAACTCCACAATCGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

185

Amino Acids

20.67

Weight (kDa)

9.37

Isoelectric Point (pI)

18.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000164)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02320 FvH4_1g21472 FvH4_2g00813 FvH4_2g02512 FvH4_2g03921 FvH4_2g23460 FvH4_3g29141 FvH4_4g05791 FvH4_4g06321 FvH4_4g15595 FvH4_4g18162 FvH4_4g18163 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_5g31093 FvH4_6g01982 FvH4_6g21931 FvH4_6g44691 FvH4_6g48541
prunus_persica Prupe.1G074100_v2.0.a1 Prupe.3G021400_v2.0.a1
pyrus_communis pycom02g18570 pycom14g00670
rosa_chinensis RchiOBHm_Chr1g0379201 RchiOBHm_Chr1g0379361 RchiOBHm_Chr4g0405981 RchiOBHm_Chr5g0073641 RchiOBHm_Chr5g0073651 RchiOBHm_Chr7g0236661
rosa_multiflora Rmu_co8179562.1_g000001 Rmu_co8343647.1_g000001 Rmu_sc0000041.1_g000017 Rmu_sc0000114.1_g000020 Rmu_sc0000286.1_g000006 Rmu_sc0000308.1_g000038 Rmu_sc0000365.1_g000061 Rmu_sc0000365.1_g000062 Rmu_sc0000538.1_g000060 Rmu_sc0000538.1_g000061 Rmu_sc0000586.1_g000016 Rmu_sc0000898.1_g000007 Rmu_sc0000913.1_g000003 Rmu_sc0000913.1_g000004 Rmu_sc0000996.1_g000006 Rmu_sc0000996.1_g000007 Rmu_sc0000998.1_g000003 Rmu_sc0001350.1_g000009 Rmu_sc0002079.1_g000009 Rmu_sc0002200.1_g000013 Rmu_sc0002226.1_g000025 Rmu_sc0002279.1_g000014 Rmu_sc0002478.1_g000014 Rmu_sc0002717.1_g000004 Rmu_sc0002868.1_g000027 Rmu_sc0002889.1_g000043 Rmu_sc0003023.1_g000001 Rmu_sc0003110.1_g000006 Rmu_sc0003226.1_g000028 Rmu_sc0003226.1_g000029 Rmu_sc0003337.1_g000053 Rmu_sc0003558.1_g000007 Rmu_sc0004345.1_g000014 Rmu_sc0004383.1_g000007 Rmu_sc0004888.1_g000021 Rmu_sc0005114.1_g000012 Rmu_sc0005223.1_g000019 Rmu_sc0005223.1_g000020 Rmu_sc0005639.1_g000025 Rmu_sc0005685.1_g000027 Rmu_sc0005992.1_g000002 Rmu_sc0006326.1_g000034 Rmu_sc0006326.1_g000035 Rmu_sc0007390.1_g000012 Rmu_sc0007451.1_g000006 Rmu_sc0007825.1_g000003 Rmu_sc0008600.1_g000023 Rmu_sc0009291.1_g000003 Rmu_sc0012046.1_g000001 Rmu_sc0012046.1_g000002 Rmu_sc0012710.1_g000001 Rmu_sc0015238.1_g000001 Rmu_sc0016125.1_g000003 Rmu_sc0016175.1_g000001 Rmu_sc0016898.1_g000001 Rmu_sc0017323.1_g000010 Rmu_sc0017874.1_g000002 Rmu_sc0019167.1_g000001 Rmu_sc0020815.1_g000006 Rmu_sc0025564.1_g000001 Rmu_sc0026418.1_g000001 Rmu_sc0035188.1_g000002 Rmu_sc0039254.1_g000001 Rmu_ssc0000120.1_g000015 Rmu_ssc0000120.1_g000016 Rmu_ssc0000330.1_g000023 Rmu_ssc0000433.1_g000004
rosa_roxburghii Rroxscaffold_1G00047130 Rroxscaffold_1G00051320 Rroxscaffold_1G00056600 Rroxscaffold_2G00109650 Rroxscaffold_2G00119980 Rroxscaffold_3G00222550 Rroxscaffold_3G00224980 Rroxscaffold_3G00251020 Rroxscaffold_6G00411190 Rroxscaffold_7G00166520 Rroxscaffold_7G00172920 Rroxscaffold_7G00191860 Rroxscaffold_7G00194430
rosa_rugosa Rorug01G0198900 Rorug01G0217300 Rorug01G0244500 Rorug02G0147400 Rorug02G0152200 Rorug02G0595500 Rorug02G0595600 Rorug03G0060500 Rorug03G0203000 Rorug03G0285800 Rorug04G0027200 Rorug04G0027300 Rorug04G0225800 Rorug05G0073400 Rorug05G0213300 Rorug05G0324600 Rorug05G0390900 Rorug05G0391000 Rorug05G0391100 Rorug05G0391200 Rorug05G0462900 Rorug05G0473000 Rorug06G0256500 Rorug07G0199000 Rorug07G0208800 Rorug07G0208800 Rorug07G0316600 Rorug07G0316700
rosa_samantha Rh2BG532400 Rh2CG581900 Rh3CG322600 Rh6AG079900 Rh6AG250800 Rh6AG496300 Rh6BG506100 Rh6CG126000 Rh6CG511700 Rh6DG109400 Rh6DG112700 Rh7CG104500 Rh7CG322000 Rh7CG431500
rosa_wichuraiana Rw0G020410 Rw1G009190 Rw1G014580 Rw1G021000 Rw1G022190 Rw2G025900 Rw2G029920 Rw2G037530 Rw3G018560 Rw3G020560 Rw4G008500 Rw4G022520 Rw5G019030 Rw5G031180 Rw5G044830 Rw6G005010 Rw6G006890 Rw6G011330 Rw6G011380 Rw6G023900 Rw7G028490 Rw7G030170 Rw7G030370 Rw7G032030 Rw7G032040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 302
AccB1I GGYRCC 1 cut(s) 302
AccB7I CCANNNNNTGG 1 cut(s) 296
AclWI GGATC 1 cut(s) 427
AfaI GTAC 1 cut(s) 304
AfiI CCNNNNNNNGG 1 cut(s) 296
AgsI TTSAA 1 cut(s) 395
AluBI AGCT 1 cut(s) 42
AluI AGCT 1 cut(s) 42
Alw26I GTCTC 2 cut(s) 230, 424
AlwI GGATC 1 cut(s) 427
AoxI GGCC 1 cut(s) 287
AseI ATTAAT 1 cut(s) 95
Asp718I GGTACC 1 cut(s) 302
BanI GGYRCC 1 cut(s) 302
BccI CCATC 1 cut(s) 256
BciVI GTATCC 1 cut(s) 259
BclI TGATCA 1 cut(s) 400
BcoDI GTCTC 2 cut(s) 230, 424
BfaI CTAG 2 cut(s) 170, 423
BfuI GTATCC 1 cut(s) 259
BmiI GGNNCC 2 cut(s) 304, 321
Bsa29I ATCGAT 1 cut(s) 368
Bsc4I CCNNNNNNNGG 1 cut(s) 296
BseCI ATCGAT 1 cut(s) 368
BseLI CCNNNNNNNGG 1 cut(s) 296
BshFI GGCC 1 cut(s) 289
BshNI GGYRCC 1 cut(s) 302
BshVI ATCGAT 1 cut(s) 368
BslFI GGGAC 1 cut(s) 23
BslI CCNNNNNNNGG 1 cut(s) 296
BsmAI GTCTC 2 cut(s) 230, 424
BsmFI GGGAC 1 cut(s) 23
BsnI GGCC 1 cut(s) 289
Bsp143I GATC 2 cut(s) 400, 419
BspANI GGCC 1 cut(s) 289
BspDI ATCGAT 1 cut(s) 368
BspHI TCATGA 1 cut(s) 517
BspLI GGNNCC 2 cut(s) 304, 321
BspPI GGATC 1 cut(s) 427
BspT107I GGYRCC 1 cut(s) 302
BssMI GATC 2 cut(s) 400, 419
Bst6I CTCTTC 1 cut(s) 461
BstDEI CTNAG 1 cut(s) 65
BstEII GGTNACC 1 cut(s) 479
BstKTI GATC 2 cut(s) 403, 422
BstMAI GTCTC 2 cut(s) 230, 424
BstMBI GATC 2 cut(s) 400, 419
BstPI GGTNACC 1 cut(s) 479
BstX2I RGATCY 1 cut(s) 419
BstYI RGATCY 1 cut(s) 419
Bsu15I ATCGAT 1 cut(s) 368
BsuI GTATCC 1 cut(s) 259
BsuRI GGCC 1 cut(s) 289
BsuTUI ATCGAT 1 cut(s) 368
BtgZI GCGATG 1 cut(s) 275
CciI TCATGA 1 cut(s) 517
ClaI ATCGAT 1 cut(s) 368
Csp6I GTAC 1 cut(s) 303
CviAII CATG 4 cut(s) 353, 404, 491, 518
CviJI RGCY 3 cut(s) 42, 186, 289
CviKI_1 RGCY 3 cut(s) 42, 186, 289
CviQI GTAC 1 cut(s) 303
DdeI CTNAG 1 cut(s) 65
DpnI GATC 2 cut(s) 402, 421
DpnII GATC 2 cut(s) 400, 419
Eam1104I CTCTTC 1 cut(s) 461
EarI CTCTTC 1 cut(s) 461
Eco91I GGTNACC 1 cut(s) 479
EcoO65I GGTNACC 1 cut(s) 479
FaeI CATG 4 cut(s) 356, 407, 494, 521
FaqI GGGAC 1 cut(s) 23
FatI CATG 4 cut(s) 352, 403, 490, 517
FbaI TGATCA 1 cut(s) 400
FspBI CTAG 2 cut(s) 170, 423
HaeIII GGCC 1 cut(s) 289
Hin1II CATG 4 cut(s) 356, 407, 494, 521
Hpy166II GTNNAC 1 cut(s) 245
Hpy188I TCNGA 1 cut(s) 537
Hpy188III TCNNGA 3 cut(s) 392, 423, 518
Hpy8I GTNNAC 1 cut(s) 245
HpyAV CCTTC 1 cut(s) 494
HpyCH4V TGCA 5 cut(s) 101, 143, 329, 356, 462
HpyF3I CTNAG 1 cut(s) 65
Hsp92II CATG 4 cut(s) 356, 407, 494, 521
KpnI GGTACC 1 cut(s) 306
Ksp22I TGATCA 1 cut(s) 400
Kzo9I GATC 2 cut(s) 400, 419
LpnPI CCDG 2 cut(s) 339, 411
MaeI CTAG 2 cut(s) 170, 423
MaeIII GTNAC 1 cut(s) 479
MalI GATC 2 cut(s) 402, 421
MboI GATC 2 cut(s) 400, 419
MboII GAAGA 2 cut(s) 292, 478
MfeI CAATTG 1 cut(s) 144
MflI RGATCY 1 cut(s) 419
MluCI AATT 6 cut(s) 57, 96, 106, 144, 154, 529
MnlI CCTC 3 cut(s) 250, 333, 462
MseI TTAA 7 cut(s) 56, 60, 95, 408, 435, 474, 513
MslI CAYNNNNRTG 1 cut(s) 495
MunI CAATTG 1 cut(s) 144
NdeII GATC 2 cut(s) 400, 419
NlaIII CATG 4 cut(s) 356, 407, 494, 521
NlaIV GGNNCC 2 cut(s) 304, 321
PacI TTAATTAA 1 cut(s) 60
PagI TCATGA 1 cut(s) 517
PflMI CCANNNNNTGG 1 cut(s) 296
PshBI ATTAAT 1 cut(s) 95
PspEI GGTNACC 1 cut(s) 479
PspN4I GGNNCC 2 cut(s) 304, 321
PsuI RGATCY 1 cut(s) 419
RsaI GTAC 1 cut(s) 304
RsaNI GTAC 1 cut(s) 303
RseI CAYNNNNRTG 1 cut(s) 495
SaqAI TTAA 7 cut(s) 56, 60, 95, 408, 435, 474, 513
Sau3AI GATC 2 cut(s) 400, 419
SetI ASST 7 cut(s) 44, 106, 131, 136, 325, 400, 486
SmiMI CAYNNNNRTG 1 cut(s) 495
Sse9I AATT 6 cut(s) 57, 96, 106, 144, 154, 529
SspMI CTAG 2 cut(s) 170, 423
TaqI TCGA 1 cut(s) 368
TasI AATT 6 cut(s) 57, 96, 106, 144, 154, 529
Tru1I TTAA 7 cut(s) 56, 60, 95, 408, 435, 474, 513
Tru9I TTAA 7 cut(s) 56, 60, 95, 408, 435, 474, 513
TspDTI ATGAA 3 cut(s) 51, 287, 324
Van91I CCANNNNNTGG 1 cut(s) 296
VspI ATTAAT 1 cut(s) 95
XbaI TCTAGA 1 cut(s) 422
XcmI CCANNNNNNNNNTGG 2 cut(s) 313, 340
XspI CTAG 2 cut(s) 170, 423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.