Rorug05G0391100

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000164
Physical Location & Seq
Forward (+)
53305023 .. 53306729
1707 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0391100.1

Sequence Viewer

Length: 1272 bp
ATGCAGGCTCTTTTACCACCCAATTATCTCCTCAAGCCCTACATTCCCCTCCCGTCCCGGGTCGGGCCGACCCGCCTCACCGTCCAATGCGCCTACCCCTCCGACTCCCTCAACTTCCACAGCTCCGTCGGCTCCACCCGATCCGACTGGCAGAGCTCCTGCGCCATTCTCGCCAGCAAGGTCGTCTCCTCCCAGGAGCAGCCCGCTGAAAAATCCGGAAGCGCCGACCACGTCGCCGCGGTCAACGGCCACAAGACCTCCGTTGACCTCGACCTCGTCCCCATCGAGAAGCTCTCCTCCACCGACGACAAGCCGGCCTCACCTCCCGCCAAGGCCCTCACCATCGCCGACCTCTCCCCGGCGCCTATGCACGGCGCCCAGCTGCGCGTGGCTTACCAGGGCGTTCCCGGCGCGTACTCCGAGGCCGCCGCCGGTAAGGCCTACCCCAACTGCGAGGCCATTCCCTGCGATCAATTCGAAGTCGCTTTCCAGGCCGTGGAGCTCTGGATCGCCGACCGGGCCGTTTTGCCGATTGAAAACTCCCTCGGCGGCTCAATCCACCGGAATTACGATCTTCTCCTCCGCCACCGCCTCCACATCGTCGGCGAGGTCCAGTTACCGGTCCACCACTGCCTGTTAGCACTCCCGGGGGTCCGAAAAGACTACTTGACCCGAGTCATCTCCCACCCGCAGGCCCTGGCCCAGTGCGAGCTCACTCTCACCAAGCTCGGCCTCAACGTCGCACGCGAGGCAGTCGACGACACCGCCGGCGCCGCCGAGTTCATCGCCGCCAACAACCTCCGCGACACGGCCGCAATCGCCAGCGCACGCGCCGCCGATCTGTACGGGCTGAACATCCTCGCCGACGGGATCCAGGACGACTCGAGCAACGTGACCCGGTTCGTGATGCTGGCCCGGGAGCCGATAATTCCCCGGACGGACCGGCCGTTCAAGACGAGCATAGTCTTCGCGCACGACAAAGGGACGTCGGTGCTGTTCAAGGTGCTATCGGCGTTCGCGTTCAGGAACATAAGCTTGACGAAGATCGAGTCGCGGCCGCACCGGAACCGTCCGATCAGACTGGTGAACGACTCGAACGAAGGGACGGCGAAGCACTTCGAGTACTTGTTCTACGTGGACTTCGAGGCGTCCATGGCGGAGGTTAGAGCACAGAATGCGTTGGCGGAGGTCCAGGAGTTCACGTCTTTCTTGAGGGTCCTTGGAAGCTACCCTATGGATATGACCCCTTGGAGTCCTTCGCGGGGTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

423

Amino Acids

46.08

Weight (kDa)

6.23

Isoelectric Point (pI)

39.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDT PF00800 130 - 307 5.4e-59 Prephenate dehydratase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000164)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02320 FvH4_1g21472 FvH4_2g00813 FvH4_2g02512 FvH4_2g03921 FvH4_2g23460 FvH4_3g29141 FvH4_4g05791 FvH4_4g06321 FvH4_4g15595 FvH4_4g18162 FvH4_4g18163 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_5g31093 FvH4_6g01982 FvH4_6g21931 FvH4_6g44691 FvH4_6g48541
prunus_persica Prupe.1G074100_v2.0.a1 Prupe.3G021400_v2.0.a1
pyrus_communis pycom02g18570 pycom14g00670
rosa_chinensis RchiOBHm_Chr1g0379201 RchiOBHm_Chr1g0379361 RchiOBHm_Chr4g0405981 RchiOBHm_Chr5g0073641 RchiOBHm_Chr5g0073651 RchiOBHm_Chr7g0236661
rosa_multiflora Rmu_co8179562.1_g000001 Rmu_co8343647.1_g000001 Rmu_sc0000041.1_g000017 Rmu_sc0000114.1_g000020 Rmu_sc0000286.1_g000006 Rmu_sc0000308.1_g000038 Rmu_sc0000365.1_g000061 Rmu_sc0000365.1_g000062 Rmu_sc0000538.1_g000060 Rmu_sc0000538.1_g000061 Rmu_sc0000586.1_g000016 Rmu_sc0000898.1_g000007 Rmu_sc0000913.1_g000003 Rmu_sc0000913.1_g000004 Rmu_sc0000996.1_g000006 Rmu_sc0000996.1_g000007 Rmu_sc0000998.1_g000003 Rmu_sc0001350.1_g000009 Rmu_sc0002079.1_g000009 Rmu_sc0002200.1_g000013 Rmu_sc0002226.1_g000025 Rmu_sc0002279.1_g000014 Rmu_sc0002478.1_g000014 Rmu_sc0002717.1_g000004 Rmu_sc0002868.1_g000027 Rmu_sc0002889.1_g000043 Rmu_sc0003023.1_g000001 Rmu_sc0003110.1_g000006 Rmu_sc0003226.1_g000028 Rmu_sc0003226.1_g000029 Rmu_sc0003337.1_g000053 Rmu_sc0003558.1_g000007 Rmu_sc0004345.1_g000014 Rmu_sc0004383.1_g000007 Rmu_sc0004888.1_g000021 Rmu_sc0005114.1_g000012 Rmu_sc0005223.1_g000019 Rmu_sc0005223.1_g000020 Rmu_sc0005639.1_g000025 Rmu_sc0005685.1_g000027 Rmu_sc0005992.1_g000002 Rmu_sc0006326.1_g000034 Rmu_sc0006326.1_g000035 Rmu_sc0007390.1_g000012 Rmu_sc0007451.1_g000006 Rmu_sc0007825.1_g000003 Rmu_sc0008600.1_g000023 Rmu_sc0009291.1_g000003 Rmu_sc0012046.1_g000001 Rmu_sc0012046.1_g000002 Rmu_sc0012710.1_g000001 Rmu_sc0015238.1_g000001 Rmu_sc0016125.1_g000003 Rmu_sc0016175.1_g000001 Rmu_sc0016898.1_g000001 Rmu_sc0017323.1_g000010 Rmu_sc0017874.1_g000002 Rmu_sc0019167.1_g000001 Rmu_sc0020815.1_g000006 Rmu_sc0025564.1_g000001 Rmu_sc0026418.1_g000001 Rmu_sc0035188.1_g000002 Rmu_sc0039254.1_g000001 Rmu_ssc0000120.1_g000015 Rmu_ssc0000120.1_g000016 Rmu_ssc0000330.1_g000023 Rmu_ssc0000433.1_g000004
rosa_roxburghii Rroxscaffold_1G00047130 Rroxscaffold_1G00051320 Rroxscaffold_1G00056600 Rroxscaffold_2G00109650 Rroxscaffold_2G00119980 Rroxscaffold_3G00222550 Rroxscaffold_3G00224980 Rroxscaffold_3G00251020 Rroxscaffold_6G00411190 Rroxscaffold_7G00166520 Rroxscaffold_7G00172920 Rroxscaffold_7G00191860 Rroxscaffold_7G00194430
rosa_rugosa Rorug01G0198900 Rorug01G0217300 Rorug01G0244500 Rorug02G0147400 Rorug02G0152200 Rorug02G0595500 Rorug02G0595600 Rorug03G0060500 Rorug03G0203000 Rorug03G0285800 Rorug04G0027200 Rorug04G0027300 Rorug04G0225800 Rorug05G0073400 Rorug05G0213300 Rorug05G0324600 Rorug05G0390900 Rorug05G0391000 Rorug05G0391100 Rorug05G0391200 Rorug05G0462900 Rorug05G0473000 Rorug06G0256500 Rorug07G0199000 Rorug07G0208800 Rorug07G0208800 Rorug07G0316600 Rorug07G0316700
rosa_samantha Rh2BG532400 Rh2CG581900 Rh3CG322600 Rh6AG079900 Rh6AG250800 Rh6AG496300 Rh6BG506100 Rh6CG126000 Rh6CG511700 Rh6DG109400 Rh6DG112700 Rh7CG104500 Rh7CG322000 Rh7CG431500
rosa_wichuraiana Rw0G020410 Rw1G009190 Rw1G014580 Rw1G021000 Rw1G022190 Rw2G025900 Rw2G029920 Rw2G037530 Rw3G018560 Rw3G020560 Rw4G008500 Rw4G022520 Rw5G019030 Rw5G031180 Rw5G044830 Rw6G005010 Rw6G006890 Rw6G011330 Rw6G011380 Rw6G023900 Rw7G028490 Rw7G030170 Rw7G030370 Rw7G032030 Rw7G032040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 989
AccB1I GGYRCC 3 cut(s) 361, 374, 770
AccB7I CCANNNNNTGG 1 cut(s) 496
AccI GTMKAC 1 cut(s) 756
AccIII TCCGGA 1 cut(s) 215
AclWI GGATC 4 cut(s) 135, 515, 865, 878
AcoI YGGCCR 4 cut(s) 247, 810, 944, 1055
AcyI GRCGYC 5 cut(s) 362, 375, 771, 986, 1148
AfaI GTAC 3 cut(s) 416, 845, 1124
AfiI CCNNNNNNNGG 9 cut(s) 58, 63, 358, 371, 496, 619, 691, 808, 1262
AgeI ACCGGT 1 cut(s) 619
AgsI TTSAA 3 cut(s) 536, 952, 1000
AjiI CACGTC 2 cut(s) 232, 1203
AjnI CCWGG 6 cut(s) 192, 396, 489, 696, 873, 1191
AloI GAACNNNNNNTCC 2 cut(s) 932, 964
AluBI AGCT 9 cut(s) 123, 156, 292, 382, 502, 712, 727, 1035, 1227
AluI AGCT 9 cut(s) 123, 156, 292, 382, 502, 712, 727, 1035, 1227
Alw21I GWGCWC 4 cut(s) 158, 504, 714, 1171
Alw26I GTCTC 1 cut(s) 190
AlwI GGATC 4 cut(s) 135, 515, 865, 878
AlwNI CAGNNNCTG 1 cut(s) 697
Ama87I CYCGRG 5 cut(s) 57, 646, 672, 883, 915
Aor13HI TCCGGA 1 cut(s) 215
ApeKI GCWGC 2 cut(s) 199, 382
ArsI GACNNNNNNTTYG 2 cut(s) 1034, 1066
AsiGI ACCGGT 1 cut(s) 619
Asp700I GAANNNNTTC 1 cut(s) 1115
AsuHPI GGTGA 5 cut(s) 70, 312, 331, 712, 1096
AsuII TTCGAA 1 cut(s) 477
AvaI CYCGRG 5 cut(s) 57, 646, 672, 883, 915
AvaII GGWCC 6 cut(s) 610, 622, 652, 940, 1189, 1216
BamHI GGATCC 1 cut(s) 870
BanI GGYRCC 3 cut(s) 361, 374, 770
BanII GRGCYC 3 cut(s) 158, 504, 714
BbsI GAAGAC 1 cut(s) 958
Bbv12I GWGCWC 4 cut(s) 158, 504, 714, 1171
BbvI GCAGC 2 cut(s) 211, 369
BccI CCATC 2 cut(s) 290, 350
BceAI ACGGC 7 cut(s) 262, 388, 479, 506, 825, 931, 1122
BcgI CGANNNNNNTGC 2 cut(s) 949, 983
BciT130I CCWGG 6 cut(s) 194, 398, 491, 698, 875, 1193
BcoDI GTCTC 1 cut(s) 190
BfaI CTAG 1 cut(s) 1270
BfoI RGCGCY 4 cut(s) 225, 365, 378, 774
BglI GCCNNNNNGGC 2 cut(s) 437, 518
BmcAI AGTACT 1 cut(s) 1124
Bme18I GGWCC 6 cut(s) 610, 622, 652, 940, 1189, 1216
BmeT110I CYCGRG 5 cut(s) 57, 646, 672, 883, 915
BmgBI CACGTC 2 cut(s) 232, 1203
BmiI GGNNCC 9 cut(s) 133, 363, 376, 653, 772, 872, 921, 1067, 1217
BmrI ACTGGG 1 cut(s) 697
BmsI GCATC 1 cut(s) 897
BmuI ACTGGG 1 cut(s) 697
BoxI GACNNNNGTC 1 cut(s) 674
BpiI GAAGAC 1 cut(s) 958
BplI GAGNNNNNCTC 2 cut(s) 278, 310
Bpu14I TTCGAA 1 cut(s) 477
BpuEI CTTGAG 2 cut(s) 17, 1231
BsaAI YACGTR 1 cut(s) 1135
BsaHI GRCGYC 5 cut(s) 362, 375, 771, 986, 1148
BsaWI WCCGGW 4 cut(s) 215, 561, 619, 1062
BsaXI ACNNNNNCTCC 4 cut(s) 242, 272, 1187, 1217
Bsc4I CCNNNNNNNGG 9 cut(s) 58, 63, 358, 371, 496, 619, 691, 808, 1262
Bse118I RCCGGY 5 cut(s) 313, 431, 619, 767, 942
Bse1I ACTGG 4 cut(s) 152, 613, 703, 1086
BseAI TCCGGA 1 cut(s) 215
BseBI CCWGG 6 cut(s) 194, 398, 491, 698, 875, 1193
BseGI GGATG 1 cut(s) 855
BseLI CCNNNNNNNGG 9 cut(s) 58, 63, 358, 371, 496, 619, 691, 808, 1262
BseNI ACTGG 4 cut(s) 152, 613, 703, 1086
BseRI GAGGAG 4 cut(s) 20, 178, 286, 569
BseX3I CGGCCG 3 cut(s) 810, 944, 1055
BseXI GCAGC 2 cut(s) 211, 369
BseYI CCCAGC 1 cut(s) 378
Bsh1285I CGRYCG 4 cut(s) 517, 813, 947, 1058
BshNI GGYRCC 3 cut(s) 361, 374, 770
BshTI ACCGGT 1 cut(s) 619
BsiEI CGRYCG 4 cut(s) 517, 813, 947, 1058
BsiHKAI GWGCWC 4 cut(s) 158, 504, 714, 1171
BsiHKCI CYCGRG 5 cut(s) 57, 646, 672, 883, 915
BslFI GGGAC 4 cut(s) 40, 263, 997, 1117
BslI CCNNNNNNNGG 9 cut(s) 58, 63, 358, 371, 496, 619, 691, 808, 1262
BsmAI GTCTC 1 cut(s) 190
BsmBI CGTCTC 1 cut(s) 190
BsmFI GGGAC 4 cut(s) 40, 263, 997, 1117
BsmI GAATGC 1 cut(s) 1180
BsoBI CYCGRG 5 cut(s) 57, 646, 672, 883, 915
Bsp119I TTCGAA 1 cut(s) 477
Bsp1286I GDGCHC 4 cut(s) 158, 504, 714, 1171
Bsp13I TCCGGA 1 cut(s) 215
Bsp143I GATC 8 cut(s) 140, 469, 507, 571, 838, 870, 1044, 1074
Bsp19I CCATGG 1 cut(s) 1152
BspEI TCCGGA 1 cut(s) 215
BspLI GGNNCC 9 cut(s) 133, 363, 376, 653, 772, 872, 921, 1067, 1217
BspPI GGATC 4 cut(s) 135, 515, 865, 878
BspT104I TTCGAA 1 cut(s) 477
BspT107I GGYRCC 3 cut(s) 361, 374, 770
BsrFI RCCGGY 5 cut(s) 313, 431, 619, 767, 942
BsrI ACTGG 4 cut(s) 152, 613, 703, 1086
BssAI RCCGGY 5 cut(s) 313, 431, 619, 767, 942
BssMI GATC 8 cut(s) 140, 469, 507, 571, 838, 870, 1044, 1074
BssNI GRCGYC 5 cut(s) 362, 375, 771, 986, 1148
BssT1I CCWWGG 4 cut(s) 330, 1152, 1219, 1247
Bst2UI CCWGG 6 cut(s) 194, 398, 491, 698, 875, 1193
Bst4CI ACNGT 2 cut(s) 82, 1070
BstACI GRCGYC 5 cut(s) 362, 375, 771, 986, 1148
BstAPI GCANNNNNTGC 1 cut(s) 1175
BstBAI YACGTR 1 cut(s) 1135
BstBI TTCGAA 1 cut(s) 477
BstDSI CCRYGG 3 cut(s) 237, 495, 1152
BstF5I GGATG 1 cut(s) 855
BstH2I RGCGCY 4 cut(s) 225, 365, 378, 774
BstKTI GATC 8 cut(s) 143, 472, 510, 574, 841, 873, 1047, 1077
BstMAI GTCTC 1 cut(s) 190
BstMBI GATC 8 cut(s) 140, 469, 507, 571, 838, 870, 1044, 1074
BstMCI CGRYCG 4 cut(s) 517, 813, 947, 1058
BstNI CCWGG 6 cut(s) 194, 398, 491, 698, 875, 1193
BstPAI GACNNNNGTC 1 cut(s) 674
BstV1I GCAGC 2 cut(s) 211, 369
BstV2I GAAGAC 1 cut(s) 958
BstX2I RGATCY 1 cut(s) 870
BstYI RGATCY 1 cut(s) 870
BstZI CGGCCG 3 cut(s) 810, 944, 1055
BtgI CCRYGG 3 cut(s) 237, 495, 1152
BtgZI GCGATG 2 cut(s) 328, 769
BtrI CACGTC 2 cut(s) 232, 1203
BtsCI GGATG 1 cut(s) 855
BtsI GCAGTG 1 cut(s) 628
BtsIMutI CAGTG 2 cut(s) 628, 710
CaiI CAGNNNCTG 1 cut(s) 697
CciNI GCGGCCGC 1 cut(s) 1055
Cfr10I RCCGGY 5 cut(s) 313, 431, 619, 767, 942
Cfr42I CCGCGG 1 cut(s) 240
Cfr9I CCCGGG 3 cut(s) 57, 646, 915
CpoI CGGWCCG 1 cut(s) 940
CseI GACGC 1 cut(s) 1137
Csp6I GTAC 3 cut(s) 415, 844, 1123
CspAI ACCGGT 1 cut(s) 619
CspI CGGWCCG 1 cut(s) 940
CviAII CATG 1 cut(s) 1153
CviQI GTAC 3 cut(s) 415, 844, 1123
DinI GGCGCC 3 cut(s) 363, 376, 772
DpnI GATC 8 cut(s) 142, 471, 509, 573, 840, 872, 1046, 1076
DpnII GATC 8 cut(s) 140, 469, 507, 571, 838, 870, 1044, 1074
EaeI YGGCCR 4 cut(s) 247, 810, 944, 1055
EagI CGGCCG 3 cut(s) 810, 944, 1055
EciI GGCGGA 3 cut(s) 572, 1172, 1199
Ecl136II GAGCTC 3 cut(s) 156, 502, 712
EclXI CGGCCG 3 cut(s) 810, 944, 1055
Eco130I CCWWGG 4 cut(s) 330, 1152, 1219, 1247
Eco147I AGGCCT 1 cut(s) 440
Eco24I GRGCYC 3 cut(s) 158, 504, 714
Eco47I GGWCC 6 cut(s) 610, 622, 652, 940, 1189, 1216
Eco52I CGGCCG 3 cut(s) 810, 944, 1055
Eco53kI GAGCTC 3 cut(s) 156, 502, 712
Eco88I CYCGRG 5 cut(s) 57, 646, 672, 883, 915
EcoICRI GAGCTC 3 cut(s) 156, 502, 712
EcoO109I RGGNCCY 3 cut(s) 334, 694, 1216
EcoRII CCWGG 6 cut(s) 192, 396, 489, 696, 873, 1191
EcoT14I CCWWGG 4 cut(s) 330, 1152, 1219, 1247
EcoT38I GRGCYC 3 cut(s) 158, 504, 714
EgeI GGCGCC 3 cut(s) 363, 376, 772
EheI GGCGCC 3 cut(s) 363, 376, 772
ErhI CCWWGG 4 cut(s) 330, 1152, 1219, 1247
Esp3I CGTCTC 1 cut(s) 190
FaeI CATG 1 cut(s) 1156
FaiI YATR 6 cut(s) 368, 962, 1031, 1154, 1235, 1241
FaqI GGGAC 4 cut(s) 40, 263, 997, 1117
FatI CATG 1 cut(s) 1152
FauI CCCGC 5 cut(s) 80, 211, 334, 696, 1254
FblI GTMKAC 1 cut(s) 756
FokI GGATG 1 cut(s) 842
FriOI GRGCYC 3 cut(s) 158, 504, 714
FspBI CTAG 1 cut(s) 1270
GsaI CCCAGC 1 cut(s) 382
HaeII RGCGCY 4 cut(s) 225, 365, 378, 774
HgaI GACGC 1 cut(s) 1137
Hin1I GRCGYC 5 cut(s) 362, 375, 771, 986, 1148
Hin1II CATG 1 cut(s) 1156
HincII GTYRAC 3 cut(s) 244, 265, 757
HindII GTYRAC 3 cut(s) 244, 265, 757
HindIII AAGCTT 1 cut(s) 1033
HinfI GANTC 6 cut(s) 104, 675, 881, 1049, 1091, 1252
HphI GGTGA 5 cut(s) 70, 312, 331, 712, 1096
Hpy166II GTNNAC 7 cut(s) 244, 265, 625, 757, 1087, 1138, 1200
Hpy188I TCNGA 6 cut(s) 103, 145, 421, 656, 1074, 1079
Hpy188III TCNNGA 7 cut(s) 216, 286, 505, 904, 952, 1024, 1210
Hpy8I GTNNAC 7 cut(s) 244, 265, 625, 757, 1087, 1138, 1200
Hpy99I CGWCG 8 cut(s) 131, 236, 308, 605, 743, 761, 869, 991
HpyAV CCTTC 2 cut(s) 1094, 1266
HpyCH4III ACNGT 2 cut(s) 82, 1070
HpyCH4IV ACGT 6 cut(s) 231, 738, 891, 986, 1134, 1202
HpyCH4V TGCA 2 cut(s) 4, 370
HpySE526I ACGT 6 cut(s) 231, 738, 891, 986, 1134, 1202
Hsp92I GRCGYC 5 cut(s) 362, 375, 771, 986, 1148
Hsp92II CATG 1 cut(s) 1156
KasI GGCGCC 3 cut(s) 361, 374, 770
Kpn2I TCCGGA 1 cut(s) 215
KroI GCCGGC 2 cut(s) 313, 767
KroNI GCCGGC 2 cut(s) 315, 769
KspI CCGCGG 1 cut(s) 240
Kzo9I GATC 8 cut(s) 140, 469, 507, 571, 838, 870, 1044, 1074
LmnI GCTCC 6 cut(s) 128, 137, 161, 196, 499, 919
Lsp1109I GCAGC 2 cut(s) 211, 369
LweI GCATC 1 cut(s) 897
MaeI CTAG 1 cut(s) 1270
MaeII ACGT 6 cut(s) 231, 738, 891, 986, 1134, 1202
MaeIII GTNAC 3 cut(s) 615, 892, 1265
MalI GATC 8 cut(s) 142, 471, 509, 573, 840, 872, 1046, 1076
MboI GATC 8 cut(s) 140, 469, 507, 571, 838, 870, 1044, 1074
MboII GAAGA 3 cut(s) 566, 958, 1054
MflI RGATCY 1 cut(s) 870
MhlI GDGCHC 4 cut(s) 158, 504, 714, 1171
MluCI AATT 4 cut(s) 22, 473, 565, 927
Mly113I GGCGCC 3 cut(s) 362, 375, 771
MlyI GAGTC 6 cut(s) 98, 684, 875, 1058, 1085, 1261
MmeI TCCRAC 2 cut(s) 126, 168
MreI CGCCGGCG 1 cut(s) 767
MroI TCCGGA 1 cut(s) 215
MroNI GCCGGC 2 cut(s) 313, 767
MroXI GAANNNNTTC 1 cut(s) 1115
MspA1I CMGCKG 3 cut(s) 206, 239, 382
Mva1269I GAATGC 1 cut(s) 1180
MvaI CCWGG 6 cut(s) 194, 398, 491, 698, 875, 1193
NaeI GCCGGC 2 cut(s) 315, 769
NarI GGCGCC 3 cut(s) 362, 375, 771
NcoI CCATGG 1 cut(s) 1152
NdeII GATC 8 cut(s) 140, 469, 507, 571, 838, 870, 1044, 1074
NgoMIV GCCGGC 2 cut(s) 313, 767
NlaIII CATG 1 cut(s) 1156
NlaIV GGNNCC 9 cut(s) 133, 363, 376, 653, 772, 872, 921, 1067, 1217
NmeAIII GCCGAG 3 cut(s) 525, 708, 802
NmuCI GTSAC 2 cut(s) 892, 1265
NotI GCGGCCGC 1 cut(s) 1055
NspV TTCGAA 1 cut(s) 477
PaeR7I CTCGAG 1 cut(s) 883
PceI AGGCCT 1 cut(s) 440
PcsI WCGNNNNNNNCGW 7 cut(s) 282, 735, 744, 944, 1016, 1095, 1140
PctI GAATGC 1 cut(s) 1180
PdiI GCCGGC 2 cut(s) 315, 769
PdmI GAANNNNTTC 1 cut(s) 1115
PflFI GACNNNGTC 2 cut(s) 230, 275
PflMI CCANNNNNTGG 1 cut(s) 496
PfoI TCCNGGA 2 cut(s) 873, 1191
PinAI ACCGGT 1 cut(s) 619
PleI GAGTC 6 cut(s) 98, 683, 875, 1057, 1085, 1260
PluTI GGCGCC 3 cut(s) 365, 378, 774
PpsI GAGTC 6 cut(s) 98, 683, 875, 1057, 1085, 1260
Ppu21I YACGTR 1 cut(s) 1135
PpuMI RGGWCCY 1 cut(s) 1216
PshAI GACNNNNGTC 1 cut(s) 674
Psp124BI GAGCTC 3 cut(s) 158, 504, 714
Psp5II RGGWCCY 1 cut(s) 1216
Psp6I CCWGG 6 cut(s) 192, 396, 489, 696, 873, 1191
PspFI CCCAGC 1 cut(s) 378
PspGI CCWGG 6 cut(s) 192, 396, 489, 696, 873, 1191
PspN4I GGNNCC 9 cut(s) 133, 363, 376, 653, 772, 872, 921, 1067, 1217
PspPPI RGGWCCY 1 cut(s) 1216
PspXI VCTCGAGB 1 cut(s) 883
PstNI CAGNNNCTG 1 cut(s) 697
PsuI RGATCY 1 cut(s) 870
PsyI GACNNNGTC 2 cut(s) 230, 275
PvuII CAGCTG 1 cut(s) 382
RsaI GTAC 3 cut(s) 416, 845, 1124
RsaNI GTAC 3 cut(s) 415, 844, 1123
Rsr2I CGGWCCG 1 cut(s) 940
RsrII CGGWCCG 1 cut(s) 940
SacI GAGCTC 3 cut(s) 158, 504, 714
SacII CCGCGG 1 cut(s) 240
SalI GTCGAC 1 cut(s) 755
Sau3AI GATC 8 cut(s) 140, 469, 507, 571, 838, 870, 1044, 1074
ScaI AGTACT 1 cut(s) 1124
SchI GAGTC 6 cut(s) 98, 684, 875, 1058, 1085, 1261
SduI GDGCHC 4 cut(s) 158, 504, 714, 1171
SfaNI GCATC 1 cut(s) 897
SfoI GGCGCC 3 cut(s) 363, 376, 772
Sfr274I CTCGAG 1 cut(s) 883
Sfr303I CCGCGG 1 cut(s) 240
SfuI TTCGAA 1 cut(s) 477
SgrAI CRCCGGYG 1 cut(s) 767
SgrBI CCGCGG 1 cut(s) 240
SinI GGWCC 6 cut(s) 610, 622, 652, 940, 1189, 1216
SlaI CTCGAG 1 cut(s) 883
SmaI CCCGGG 3 cut(s) 59, 648, 917
SmlI CTYRAG 3 cut(s) 32, 883, 1210
SmoI CTYRAG 3 cut(s) 32, 883, 1210
Sse9I AATT 4 cut(s) 22, 473, 565, 927
SseBI AGGCCT 1 cut(s) 440
SspDI GGCGCC 3 cut(s) 361, 374, 770
SspMI CTAG 1 cut(s) 1270
SstI GAGCTC 3 cut(s) 158, 504, 714
StuI AGGCCT 1 cut(s) 440
StyI CCWWGG 4 cut(s) 330, 1152, 1219, 1247
TaaI ACNGT 2 cut(s) 82, 1070
TaiI ACGT 6 cut(s) 234, 741, 894, 989, 1137, 1205
TaqI TCGA 9 cut(s) 270, 285, 477, 756, 884, 1047, 1094, 1119, 1143
TasI AATT 4 cut(s) 22, 473, 565, 927
TatI WGTACW 1 cut(s) 1122
TscAI CASTG 2 cut(s) 635, 710
TseFI GTSAC 2 cut(s) 892, 1265
TseI GCWGC 2 cut(s) 199, 382
Tsp45I GTSAC 2 cut(s) 892, 1265
TspDTI ATGAA 1 cut(s) 772
TspGWI ACGGA 3 cut(s) 115, 250, 953
TspMI CCCGGG 3 cut(s) 57, 646, 915
TspRI CASTG 2 cut(s) 635, 710
Tth111I GACNNNGTC 2 cut(s) 230, 275
Van91I CCANNNNNTGG 1 cut(s) 496
VpaK11BI GGWCC 6 cut(s) 610, 622, 652, 940, 1189, 1216
XhoI CTCGAG 1 cut(s) 883
XmaI CCCGGG 3 cut(s) 57, 646, 915
XmiI GTMKAC 1 cut(s) 756
XmnI GAANNNNTTC 1 cut(s) 1115
XspI CTAG 1 cut(s) 1270
ZraI GACGTC 1 cut(s) 987
ZrmI AGTACT 1 cut(s) 1124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.