FvH4_6g21931

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000164
Physical Location & Seq
Reverse (-)
15643532 .. 15645828
2297 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g21931.t1

Sequence Viewer

Length: 1986 bp
ATGGAAAACATGGAAATTATATCAGAGGAACTGATGTTATTCCGAGGAGATACCCAGATGGCATATATCCCTGATGTTGAAGATGGTATGAAACCAAAAGCCGAGCAACGATTCGATTCATTAGATGCGGTGTACAAGTTTTACAATGATTATGCACGTAAGGCTGGATTTAGTGTCAGAAAAAGCAAGGAGACAAAGAAGAATGGAATGGTAAATTGGAAAAGATATGTATGTTTTAAAGAAGGGGAGACGGATGAGACATGGAGAAATAACAATGAAGTTGAGGAAAGAGACCGTAGGAATACTCGAACAGGGTGCAATGCAAAATTAACCCAATTCGCACTATTCGAGACACAAGCTGGTGGACATAAAAATGTTGGCTGCATTGAAAGGGATTTAAGAAATGCGGTGCGAGATGAGAGAGAAAAAGTTAAGGGGCATGATATAGACATTTTGTATGAACACTTCAAAGCTGAGCAAGAGAAGGATCCTGATTTCTTTTTTGAATTTCACACTGATGAAGAGCAAAGGCTTGTCAGATGTTTCTGGGTTGATTCAACTGCAAAAAGAGCATATTCACATTTTGGTGATGTGGTTGTATTTGATACGACATACAACACCAATCGTTACAAGATGATTTTTGCTCCTTTTGTAGGCGTGAACCACCATGGGCAGACCACAGTTTTTGGATGTGCATTTTTGAGTGATGAGACTTTTGATTCATTTGTCTGGTTGTTGAACACTTGGCTTGCAGCAATGCCTAGAGGTGCCCCGAATGTTATTATCACTGATCAAGATCAAGCAATGTCGAAGGCAATTGCTCATGTTTTGCCAAACACATTTCATAGGTATTGTATATGGCATATTTTGAAGAAATTTCCAGAGAAAACTAATGCAGCTTTTATGAAAAATTACTATGAGTTTTTCAAGAAATGCATATGGGATTCAGAGTGTCCAGAAGAATTTGAGAAGAGATGGTTTGAAGAATTGGAAAATAGTGAACAAACAAATAATGAATGGTTGGGAAAGATGTATGAGTTGCGTGAAAAGTGGATTCCAGCATATGTCAAGAAGTACTTTTCAGCAGGGATGTCAAGCAGCCAGAGAGTGGAATCTGAACATGCATTCTTTAAGCGTTATTGTAGTAAAGAAAACAGCTTGATGGATTTTGCCACACGTTTCAATAGGGCAGTTGCTCATCAGAGACATGAAGAATTGGTTGAAGACCATAAAGATTTGAATGAGACACCTATTTTAAAGCTAGGGATGCCAATGGAGGTCCAAATGGTTCATTTGTATACTAAAAAGTACTTTCAGTACTTTCAAGTTCAGCTTCATGATGGTAATGGCTATTTTGTAGATGTCGTAATGGAGGATGACATTCGTTGTGTTTACAAAACTAAAAGGGTGTTTGCTAAAAACCTTAGAATGCGGACGCTTGTACATGATAAGGTATCAAACATAGTGACATGCAGTTGTAGAATGTTTGAGTTTGAAGGTATCCCTTGTAGACATATTTTGGTTTTGTTACGACTGAAACACATTATGGAGTTGCCCAAAGATTATATATTGAGAAGATGGACAAGGTTTTCAAGAGTTCATAAACAAACAAGTCAAGGCCAACATGGTGCAGATAGTTCATTGATAATGAGACACAATGGTATGTTCAAAATTGCTTCCAGCTTAATTGATGAGGCTGCTATTTCAACTGAGGGGACTGAACTTGTGAAGAAGTCATTTGAAGGGCTATTGGAGCAAATTAAGAAGCTAAATCTTTCTGTTGGGCAATCTTCTACAAAAAATTCCACAGCTGGAACTTCTCAAGAAAATCGTTTCCTGGATCCTTTTCAAGTGAAGACTAAAGGCAGTGGATTACGCCTAACATCATGGAGAGATAGGAAAGGAAAAGTCAGACGTCGCTCTGTCGTAGAAGATGATGTCGACAAAGCATTGCGTGAACAAGATCATTTGGTTGATGAACTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

662

Amino Acids

77.88

Weight (kDa)

7.87

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 46 - 111 3.6e-12 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 163 - 280 2.1e-09 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 198 - 292 2.4e-31 MULE transposase domain
SWIM PF04434 488 - 511 1.9e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000164)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02320 FvH4_1g21472 FvH4_2g00813 FvH4_2g02512 FvH4_2g03921 FvH4_2g23460 FvH4_3g29141 FvH4_4g05791 FvH4_4g06321 FvH4_4g15595 FvH4_4g18162 FvH4_4g18163 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_5g31093 FvH4_6g01982 FvH4_6g21931 FvH4_6g44691 FvH4_6g48541
prunus_persica Prupe.1G074100_v2.0.a1 Prupe.3G021400_v2.0.a1
pyrus_communis pycom02g18570 pycom14g00670
rosa_chinensis RchiOBHm_Chr1g0379201 RchiOBHm_Chr1g0379361 RchiOBHm_Chr4g0405981 RchiOBHm_Chr5g0073641 RchiOBHm_Chr5g0073651 RchiOBHm_Chr7g0236661
rosa_multiflora Rmu_co8179562.1_g000001 Rmu_co8343647.1_g000001 Rmu_sc0000041.1_g000017 Rmu_sc0000114.1_g000020 Rmu_sc0000286.1_g000006 Rmu_sc0000308.1_g000038 Rmu_sc0000365.1_g000061 Rmu_sc0000365.1_g000062 Rmu_sc0000538.1_g000060 Rmu_sc0000538.1_g000061 Rmu_sc0000586.1_g000016 Rmu_sc0000898.1_g000007 Rmu_sc0000913.1_g000003 Rmu_sc0000913.1_g000004 Rmu_sc0000996.1_g000006 Rmu_sc0000996.1_g000007 Rmu_sc0000998.1_g000003 Rmu_sc0001350.1_g000009 Rmu_sc0002079.1_g000009 Rmu_sc0002200.1_g000013 Rmu_sc0002226.1_g000025 Rmu_sc0002279.1_g000014 Rmu_sc0002478.1_g000014 Rmu_sc0002717.1_g000004 Rmu_sc0002868.1_g000027 Rmu_sc0002889.1_g000043 Rmu_sc0003023.1_g000001 Rmu_sc0003110.1_g000006 Rmu_sc0003226.1_g000028 Rmu_sc0003226.1_g000029 Rmu_sc0003337.1_g000053 Rmu_sc0003558.1_g000007 Rmu_sc0004345.1_g000014 Rmu_sc0004383.1_g000007 Rmu_sc0004888.1_g000021 Rmu_sc0005114.1_g000012 Rmu_sc0005223.1_g000019 Rmu_sc0005223.1_g000020 Rmu_sc0005639.1_g000025 Rmu_sc0005685.1_g000027 Rmu_sc0005992.1_g000002 Rmu_sc0006326.1_g000034 Rmu_sc0006326.1_g000035 Rmu_sc0007390.1_g000012 Rmu_sc0007451.1_g000006 Rmu_sc0007825.1_g000003 Rmu_sc0008600.1_g000023 Rmu_sc0009291.1_g000003 Rmu_sc0012046.1_g000001 Rmu_sc0012046.1_g000002 Rmu_sc0012710.1_g000001 Rmu_sc0015238.1_g000001 Rmu_sc0016125.1_g000003 Rmu_sc0016175.1_g000001 Rmu_sc0016898.1_g000001 Rmu_sc0017323.1_g000010 Rmu_sc0017874.1_g000002 Rmu_sc0019167.1_g000001 Rmu_sc0020815.1_g000006 Rmu_sc0025564.1_g000001 Rmu_sc0026418.1_g000001 Rmu_sc0035188.1_g000002 Rmu_sc0039254.1_g000001 Rmu_ssc0000120.1_g000015 Rmu_ssc0000120.1_g000016 Rmu_ssc0000330.1_g000023 Rmu_ssc0000433.1_g000004
rosa_roxburghii Rroxscaffold_1G00047130 Rroxscaffold_1G00051320 Rroxscaffold_1G00056600 Rroxscaffold_2G00109650 Rroxscaffold_2G00119980 Rroxscaffold_3G00222550 Rroxscaffold_3G00224980 Rroxscaffold_3G00251020 Rroxscaffold_6G00411190 Rroxscaffold_7G00166520 Rroxscaffold_7G00172920 Rroxscaffold_7G00191860 Rroxscaffold_7G00194430
rosa_rugosa Rorug01G0198900 Rorug01G0217300 Rorug01G0244500 Rorug02G0147400 Rorug02G0152200 Rorug02G0595500 Rorug02G0595600 Rorug03G0060500 Rorug03G0203000 Rorug03G0285800 Rorug04G0027200 Rorug04G0027300 Rorug04G0225800 Rorug05G0073400 Rorug05G0213300 Rorug05G0324600 Rorug05G0390900 Rorug05G0391000 Rorug05G0391100 Rorug05G0391200 Rorug05G0462900 Rorug05G0473000 Rorug06G0256500 Rorug07G0199000 Rorug07G0208800 Rorug07G0208800 Rorug07G0316600 Rorug07G0316700
rosa_samantha Rh2BG532400 Rh2CG581900 Rh3CG322600 Rh6AG079900 Rh6AG250800 Rh6AG496300 Rh6BG506100 Rh6CG126000 Rh6CG511700 Rh6DG109400 Rh6DG112700 Rh7CG104500 Rh7CG322000 Rh7CG431500
rosa_wichuraiana Rw0G020410 Rw1G009190 Rw1G014580 Rw1G021000 Rw1G022190 Rw2G025900 Rw2G029920 Rw2G037530 Rw3G018560 Rw3G020560 Rw4G008500 Rw4G022520 Rw5G019030 Rw5G031180 Rw5G044830 Rw6G005010 Rw6G006890 Rw6G011330 Rw6G011380 Rw6G023900 Rw7G028490 Rw7G030170 Rw7G030370 Rw7G032030 Rw7G032040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1918
AccB1I GGYRCC 1 cut(s) 767
AccB7I CCANNNNNTGG 1 cut(s) 1108
AccI GTMKAC 3 cut(s) 1298, 1510, 1941
AciI CCGC 3 cut(s) 128, 407, 1432
AclWI GGATC 4 cut(s) 482, 495, 1835, 1848
AcsI RAATTY 4 cut(s) 506, 875, 962, 1801
AcyI GRCGYC 1 cut(s) 1915
AfaI GTAC 5 cut(s) 134, 1076, 1310, 1319, 1443
AfiI CCNNNNNNNGG 2 cut(s) 653, 1108
AflIII ACRYGT 1 cut(s) 1175
AjnI CCWGG 1 cut(s) 1836
AjuI GAANNNNNNNTTGG 2 cut(s) 199, 231
AluBI AGCT 9 cut(s) 359, 473, 899, 1158, 1261, 1333, 1683, 1768, 1811
AluI AGCT 9 cut(s) 359, 473, 899, 1158, 1261, 1333, 1683, 1768, 1811
Alw26I GTCTC 9 cut(s) 185, 242, 251, 285, 344, 704, 1198, 1238, 1645
AlwI GGATC 4 cut(s) 482, 495, 1835, 1848
AoxI GGCC 1 cut(s) 1618
ApeKI GCWGC 5 cut(s) 381, 752, 896, 1098, 1697
ApoI RAATTY 4 cut(s) 506, 875, 962, 1801
AspS9I GGNCC 1 cut(s) 1279
AsuHPI GGTGA 1 cut(s) 599
AvaII GGWCC 1 cut(s) 1279
BaeGI GKGCMC 1 cut(s) 772
BamHI GGATCC 2 cut(s) 487, 1840
BanI GGYRCC 1 cut(s) 767
BarI GAAGNNNNNNTAC 2 cut(s) 449, 481
BbsI GAAGAC 2 cut(s) 1230, 1862
BbvI GCAGC 5 cut(s) 368, 764, 908, 1110, 1684
BccI CCATC 6 cut(s) 52, 77, 969, 1156, 1334, 1572
BcgI CGANNNNNNTGC 2 cut(s) 297, 331
BciT130I CCWGG 1 cut(s) 1838
BciVI GTATCC 1 cut(s) 1511
BclI TGATCA 1 cut(s) 790
BcoDI GTCTC 9 cut(s) 185, 242, 251, 285, 344, 704, 1198, 1238, 1645
BfaI CTAG 2 cut(s) 762, 1262
BfuI GTATCC 1 cut(s) 1511
BisI GCNGC 5 cut(s) 382, 753, 897, 1099, 1698
BlpI GCTNAGC 1 cut(s) 474
BlsI GCNGC 5 cut(s) 383, 754, 898, 1100, 1699
BmcAI AGTACT 3 cut(s) 1076, 1310, 1319
Bme1390I CCNGG 1 cut(s) 1838
Bme18I GGWCC 1 cut(s) 1279
BmgT120I GGNCC 1 cut(s) 1279
BmiI GGNNCC 3 cut(s) 489, 769, 1842
BmrFI CCNGG 1 cut(s) 1838
BmsI GCATC 2 cut(s) 115, 1257
BpiI GAAGAC 2 cut(s) 1230, 1862
Bpu1102I GCTNAGC 1 cut(s) 474
BpuEI CTTGAG 1 cut(s) 1806
BsaAI YACGTR 1 cut(s) 158
BsaBI GATNNNNATC 1 cut(s) 795
BsaHI GRCGYC 1 cut(s) 1915
BsaI GGTCTC 1 cut(s) 285
BsaJI CCNNGG 2 cut(s) 43, 667
Bsc4I CCNNNNNNNGG 2 cut(s) 653, 1108
Bse3DI GCAATG 4 cut(s) 325, 762, 810, 1949
Bse8I GATNNNNATC 1 cut(s) 795
BseBI CCWGG 1 cut(s) 1838
BseDI CCNNGG 2 cut(s) 43, 667
BseGI GGATG 5 cut(s) 259, 695, 1095, 1272, 1381
BseJI GATNNNNATC 1 cut(s) 795
BseLI CCNNNNNNNGG 2 cut(s) 653, 1108
BseMI GCAATG 4 cut(s) 325, 762, 810, 1949
BseMII CTCAG 2 cut(s) 465, 1701
BseRI GAGGAG 1 cut(s) 60
BseSI GKGCMC 1 cut(s) 772
BseXI GCAGC 5 cut(s) 368, 764, 908, 1110, 1684
BsgI GTGCAG 1 cut(s) 1650
BshFI GGCC 1 cut(s) 1620
BshNI GGYRCC 1 cut(s) 767
BslFI GGGAC 1 cut(s) 1729
BslI CCNNNNNNNGG 2 cut(s) 653, 1108
BsmAI GTCTC 9 cut(s) 185, 242, 251, 285, 344, 704, 1198, 1238, 1645
BsmBI CGTCTC 1 cut(s) 242
BsmFI GGGAC 1 cut(s) 1729
BsmI GAATGC 2 cut(s) 1124, 1434
BsnI GGCC 1 cut(s) 1620
Bso31I GGTCTC 1 cut(s) 285
Bsp1286I GDGCHC 1 cut(s) 772
Bsp1407I TGTACA 2 cut(s) 132, 1441
Bsp143I GATC 5 cut(s) 487, 790, 796, 1840, 1963
Bsp1720I GCTNAGC 1 cut(s) 474
Bsp19I CCATGG 1 cut(s) 667
BspACI CCGC 3 cut(s) 128, 407, 1432
BspANI GGCC 1 cut(s) 1620
BspCNI CTCAG 2 cut(s) 466, 1702
BspHI TCATGA 1 cut(s) 1336
BspLI GGNNCC 3 cut(s) 489, 769, 1842
BspPI GGATC 4 cut(s) 482, 495, 1835, 1848
BspQI GCTCTTC 1 cut(s) 516
BspT107I GGYRCC 1 cut(s) 767
BspTNI GGTCTC 1 cut(s) 285
BsrDI GCAATG 4 cut(s) 325, 762, 810, 1949
BsrGI TGTACA 2 cut(s) 132, 1441
BssECI CCNNGG 2 cut(s) 43, 667
BssMI GATC 5 cut(s) 487, 790, 796, 1840, 1963
BssNAI GTATAC 1 cut(s) 1299
BssNI GRCGYC 1 cut(s) 1915
BssT1I CCWWGG 1 cut(s) 667
Bst1107I GTATAC 1 cut(s) 1299
Bst2UI CCWGG 1 cut(s) 1838
Bst4CI ACNGT 2 cut(s) 296, 682
Bst6I CTCTTC 2 cut(s) 516, 965
BstACI GRCGYC 1 cut(s) 1915
BstAUI TGTACA 2 cut(s) 132, 1441
BstBAI YACGTR 1 cut(s) 158
BstC8I GCNNGC 1 cut(s) 750
BstDEI CTNAG 3 cut(s) 474, 1424, 1710
BstDSI CCRYGG 1 cut(s) 667
BstENI CCTNNNNNAGG 1 cut(s) 651
BstF5I GGATG 5 cut(s) 259, 695, 1095, 1272, 1381
BstKTI GATC 5 cut(s) 490, 793, 799, 1843, 1966
BstMAI GTCTC 9 cut(s) 185, 242, 251, 285, 344, 704, 1198, 1238, 1645
BstMBI GATC 5 cut(s) 487, 790, 796, 1840, 1963
BstMWI GCNNNNNNNGC 4 cut(s) 161, 569, 1267, 1753
BstNI CCWGG 1 cut(s) 1838
BstNSI RCATGY 2 cut(s) 1124, 1473
BstSCI CCNGG 1 cut(s) 1836
BstSLI GKGCMC 1 cut(s) 772
BstV1I GCAGC 5 cut(s) 368, 764, 908, 1110, 1684
BstV2I GAAGAC 2 cut(s) 1230, 1862
BstX2I RGATCY 2 cut(s) 487, 1840
BstYI RGATCY 2 cut(s) 487, 1840
BstZ17I GTATAC 1 cut(s) 1299
BsuI GTATCC 1 cut(s) 1511
BsuRI GGCC 1 cut(s) 1620
BtgI CCRYGG 1 cut(s) 667
BtsCI GGATG 5 cut(s) 259, 695, 1095, 1272, 1381
BtsI GCAGTG 1 cut(s) 1873
BtsIMutI CAGTG 3 cut(s) 513, 786, 1873
Cac8I GCNNGC 1 cut(s) 750
CciI TCATGA 1 cut(s) 1336
Cfr13I GGNCC 1 cut(s) 1279
CseI GACGC 1 cut(s) 1444
Csp6I GTAC 5 cut(s) 133, 1075, 1309, 1318, 1442
CspCI CAANNNNNGTGG 2 cut(s) 667, 702
CviQI GTAC 5 cut(s) 133, 1075, 1309, 1318, 1442
DdeI CTNAG 3 cut(s) 474, 1424, 1710
DpnI GATC 5 cut(s) 489, 792, 798, 1842, 1965
DpnII GATC 5 cut(s) 487, 790, 796, 1840, 1963
DraI TTTAAA 2 cut(s) 238, 1257
Eam1104I CTCTTC 2 cut(s) 516, 965
EarI CTCTTC 2 cut(s) 516, 965
Eco130I CCWWGG 1 cut(s) 667
Eco31I GGTCTC 1 cut(s) 285
Eco47I GGWCC 1 cut(s) 1279
EcoNI CCTNNNNNAGG 1 cut(s) 651
EcoRII CCWGG 1 cut(s) 1836
EcoT14I CCWWGG 1 cut(s) 667
EcoT22I ATGCAT 2 cut(s) 938, 1126
ErhI CCWWGG 1 cut(s) 667
Esp3I CGTCTC 1 cut(s) 242
FalI AAGNNNNNCTT 4 cut(s) 1061, 1093, 1317, 1349
FaqI GGGAC 1 cut(s) 1729
FauNDI CATATG 2 cut(s) 938, 1063
FbaI TGATCA 1 cut(s) 790
FblI GTMKAC 3 cut(s) 1298, 1510, 1941
Fnu4HI GCNGC 5 cut(s) 382, 753, 897, 1099, 1698
FokI GGATG 5 cut(s) 266, 702, 1102, 1279, 1388
Fsp4HI GCNGC 5 cut(s) 382, 753, 897, 1099, 1698
FspBI CTAG 2 cut(s) 762, 1262
GluI GCNGC 5 cut(s) 382, 753, 897, 1099, 1698
HaeIII GGCC 1 cut(s) 1620
HgaI GACGC 1 cut(s) 1444
Hin1I GRCGYC 1 cut(s) 1915
HincII GTYRAC 1 cut(s) 1942
HindII GTYRAC 1 cut(s) 1942
HinfI GANTC 7 cut(s) 111, 116, 554, 719, 944, 1054, 1112
HphI GGTGA 1 cut(s) 599
Hpy166II GTNNAC 9 cut(s) 133, 365, 661, 1001, 1299, 1393, 1511, 1942, 1958
Hpy188I TCNGA 8 cut(s) 25, 44, 179, 539, 949, 1117, 1203, 1913
Hpy8I GTNNAC 9 cut(s) 133, 365, 661, 1001, 1299, 1393, 1511, 1942, 1958
Hpy99I CGWCG 1 cut(s) 1920
HpyAV CCTTC 5 cut(s) 236, 478, 805, 1490, 1736
HpyCH4III ACNGT 2 cut(s) 296, 682
HpyCH4IV ACGT 3 cut(s) 157, 1177, 1915
HpyF10VI GCNNNNNNNGC 4 cut(s) 161, 569, 1267, 1753
HpyF3I CTNAG 3 cut(s) 474, 1424, 1710
HpySE526I ACGT 3 cut(s) 157, 1177, 1915
Hsp92I GRCGYC 1 cut(s) 1915
Ksp22I TGATCA 1 cut(s) 790
Kzo9I GATC 5 cut(s) 487, 790, 796, 1840, 1963
LguI GCTCTTC 1 cut(s) 516
LmnI GCTCC 2 cut(s) 649, 1753
Lsp1109I GCAGC 5 cut(s) 368, 764, 908, 1110, 1684
LweI GCATC 2 cut(s) 115, 1257
MaeI CTAG 2 cut(s) 762, 1262
MaeII ACGT 3 cut(s) 157, 1177, 1915
MaeIII GTNAC 3 cut(s) 626, 1465, 1527
MalI GATC 5 cut(s) 489, 792, 798, 1842, 1965
MboI GATC 5 cut(s) 487, 790, 796, 1840, 1963
MfeI CAATTG 1 cut(s) 816
MflI RGATCY 2 cut(s) 487, 1840
MhlI GDGCHC 1 cut(s) 772
MnlI CCTC 8 cut(s) 19, 38, 277, 758, 1270, 1366, 1687, 1705
Mph1103I ATGCAT 2 cut(s) 938, 1126
MseI TTAA 8 cut(s) 237, 329, 398, 432, 1131, 1256, 1685, 1761
MslI CAYNNNNRTG 3 cut(s) 372, 516, 585
MspA1I CMGCKG 1 cut(s) 1811
MspR9I CCNGG 1 cut(s) 1838
MunI CAATTG 1 cut(s) 816
Mva1269I GAATGC 2 cut(s) 1124, 1434
MvaI CCWGG 1 cut(s) 1838
MwoI GCNNNNNNNGC 4 cut(s) 161, 569, 1267, 1753
NcoI CCATGG 1 cut(s) 667
NdeI CATATG 2 cut(s) 938, 1063
NdeII GATC 5 cut(s) 487, 790, 796, 1840, 1963
NlaIV GGNNCC 3 cut(s) 489, 769, 1842
NmeAIII GCCGAG 1 cut(s) 127
NmuCI GTSAC 1 cut(s) 1465
NsiI ATGCAT 2 cut(s) 938, 1126
NspI RCATGY 2 cut(s) 1124, 1473
PagI TCATGA 1 cut(s) 1336
PciSI GCTCTTC 1 cut(s) 516
PcsI WCGNNNNNNNCGW 1 cut(s) 345
PctI GAATGC 2 cut(s) 1124, 1434
PfeI GAWTC 7 cut(s) 111, 116, 554, 719, 944, 1054, 1112
PflMI CCANNNNNTGG 1 cut(s) 1108
PfoI TCCNGGA 1 cut(s) 1836
PkrI GCNGC 5 cut(s) 383, 754, 898, 1100, 1699
Ppu21I YACGTR 1 cut(s) 158
Psp6I CCWGG 1 cut(s) 1836
PspGI CCWGG 1 cut(s) 1836
PspN4I GGNNCC 3 cut(s) 489, 769, 1842
PspPI GGNCC 1 cut(s) 1279
PsuI RGATCY 2 cut(s) 487, 1840
PvuII CAGCTG 1 cut(s) 1811
RsaI GTAC 5 cut(s) 134, 1076, 1310, 1319, 1443
RsaNI GTAC 5 cut(s) 133, 1075, 1309, 1318, 1442
RseI CAYNNNNRTG 3 cut(s) 372, 516, 585
SalI GTCGAC 1 cut(s) 1940
SapI GCTCTTC 1 cut(s) 516
SaqAI TTAA 8 cut(s) 237, 329, 398, 432, 1131, 1256, 1685, 1761
SatI GCNGC 5 cut(s) 382, 753, 897, 1099, 1698
Sau3AI GATC 5 cut(s) 487, 790, 796, 1840, 1963
Sau96I GGNCC 1 cut(s) 1279
ScaI AGTACT 3 cut(s) 1076, 1310, 1319
ScrFI CCNGG 1 cut(s) 1838
SduI GDGCHC 1 cut(s) 772
SfaNI GCATC 2 cut(s) 115, 1257
SinI GGWCC 1 cut(s) 1279
SmiMI CAYNNNNRTG 3 cut(s) 372, 516, 585
SmlI CTYRAG 1 cut(s) 1821
SmoI CTYRAG 1 cut(s) 1821
SsiI CCGC 3 cut(s) 128, 407, 1432
SspMI CTAG 2 cut(s) 762, 1262
StyD4I CCNGG 1 cut(s) 1836
StyI CCWWGG 1 cut(s) 667
TaaI ACNGT 2 cut(s) 296, 682
TaiI ACGT 3 cut(s) 160, 1180, 1918
TaqI TCGA 5 cut(s) 114, 307, 348, 809, 1941
TatI WGTACW 5 cut(s) 132, 1074, 1308, 1317, 1441
TfiI GAWTC 7 cut(s) 111, 116, 554, 719, 944, 1054, 1112
Tru1I TTAA 8 cut(s) 237, 329, 398, 432, 1131, 1256, 1685, 1761
Tru9I TTAA 8 cut(s) 237, 329, 398, 432, 1131, 1256, 1685, 1761
TscAI CASTG 3 cut(s) 520, 793, 1873
TseFI GTSAC 1 cut(s) 1465
TseI GCWGC 5 cut(s) 381, 752, 896, 1098, 1697
Tsp45I GTSAC 1 cut(s) 1465
TspGWI ACGGA 1 cut(s) 266
TspRI CASTG 3 cut(s) 520, 793, 1873
Van91I CCANNNNNTGG 1 cut(s) 1108
VpaK11BI GGWCC 1 cut(s) 1279
XagI CCTNNNNNAGG 1 cut(s) 651
XapI RAATTY 4 cut(s) 506, 875, 962, 1801
XceI RCATGY 2 cut(s) 1124, 1473
XmiI GTMKAC 3 cut(s) 1298, 1510, 1941
XspI CTAG 2 cut(s) 762, 1262
ZraI GACGTC 1 cut(s) 1916
ZrmI AGTACT 3 cut(s) 1076, 1310, 1319
Zsp2I ATGCAT 2 cut(s) 938, 1126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.