Rorug07G0316600

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000164
Physical Location & Seq
Forward (+)
32135988 .. 32138561
2574 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0316600.1

Sequence Viewer

Length: 1446 bp
ATGTTTTCTTGGGCATCTTCAAGAAGATCCTCAGGGGTTGTTTTGGGTGTTCAACGACTCGGCTCTCGCACATTGTTCAGTAAATCACAACCCTCATCATCGCCATCTTCGTCTTCTTCGATCAGCTCATCATGTGGTGGCACTTTTGGCTGTAACAATGAGTACAATTACAAGAGTAGATCAGGCTCCTCTAATAAGCGTAGTACATTTAATTTGATTCAGAGGTCAGTTTCTTCAGGGGTTCTAATTCTCGGGTCAAGCATAGGCTATTCTTATTGGTCTTCTGCTTCCTTGGATCCAAATGCCTCTGTTTGTTTTGCTGATTCCAAAGAGGAGGCAGCATGGGCAATCGAGCAGGACCCAGAACAGTTCAAGTCCCTCTTTTCAAATACATTTAGGAGAAAGAAGTTCTTTACGTATGAAAAAAAGATAAGAGAGCGAAGTACCCCGGAAAAGATTTTCAATTACTTTGCATCAGTTCGAACCCCTAGCGGAGAGTGCTTTATGACGCCGGGGGACTTGATGCGAGCTGTTGTTCCTGTGTTTCCTCCCTATGATTCAAATCGGGTTCGAGAAGGCTCTTTAAGAGGGGAAAATGTTCCTGGAGAATTGCAATGTGCTCCTTCTAAATTCTTCATGCTTTTCGACACTGATGGTGATGGCCTCATTTCATTTCAAGAGTACATGTTTTTCGTCACTCTCCTCAGCATTCCTGAATCGAGTTTTACTGTGGCTTTTAAAATGTTCGATCTTGACAACAGTGGAGACATTGATAGGGAAGAGTTTAACAGAGTTATGGCATTGATGCGAAATCACAACAATAAAAACAAGGACGGCCACAGGGTCAAAGTTGGTGTAGAAGAGGGAGGCATACTCGAGTACTTCTTCGGCAAAGACGGCAAAAAAGGCCTCAAGCATGAAAGATTTGTTCAGTTTTTCAGGGATTTACACGAGGAAATGTTGCGCTTGGAATTTGCTCATTATGACTACAAATCAAAAGGAACCATAACAGCTAAAGATTTTGCCTTGTCCTTGGTTGCATCTGCTGATCTCAGTGTCTTATACAAGTTGCTTGATCGTGTTGACGATATTAACAACGCCCCACGTCTTAACAACATACAAATTACATACAAGGAATTTAAAGATTTTGCAGAGCTACGCAAGAATTTGCGGTCTTTCTCTTTGGCCATTTTCAGCTACGGCGAGGTTAATGGGGTTTTGACAAAATCAGATCTCCAGAGAGCAGCTTCCAAAGTATGTGGCATCAATGTTTCAGACAATGTGATGGACATAATCTTCCATGTATTTGATGCAAACGGTGATGGTGATCTAAGTGCGAACGAGTTTGTCAAAGTTTTACAGAACCGTGGAGGTGAACCCGTAGAGTCAGGCCTCAGGGGACTCCTAGCTTGCTTCTTAAACTGTGCAACTAAAAGCTGCTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

481

Amino Acids

53.83

Weight (kDa)

8.24

Isoelectric Point (pI)

47.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EF-hand_5 PF13202 245 - 266 5.5e-06 EF hand
EF-hand_8 PF13833 404 - 455 2.7e-08 EF-hand domain pair
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000164)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02320 FvH4_1g21472 FvH4_2g00813 FvH4_2g02512 FvH4_2g03921 FvH4_2g23460 FvH4_3g29141 FvH4_4g05791 FvH4_4g06321 FvH4_4g15595 FvH4_4g18162 FvH4_4g18163 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_4g29541 FvH4_5g31093 FvH4_6g01982 FvH4_6g21931 FvH4_6g44691 FvH4_6g48541
prunus_persica Prupe.1G074100_v2.0.a1 Prupe.3G021400_v2.0.a1
pyrus_communis pycom02g18570 pycom14g00670
rosa_chinensis RchiOBHm_Chr1g0379201 RchiOBHm_Chr1g0379361 RchiOBHm_Chr4g0405981 RchiOBHm_Chr5g0073641 RchiOBHm_Chr5g0073651 RchiOBHm_Chr7g0236661
rosa_multiflora Rmu_co8179562.1_g000001 Rmu_co8343647.1_g000001 Rmu_sc0000041.1_g000017 Rmu_sc0000114.1_g000020 Rmu_sc0000286.1_g000006 Rmu_sc0000308.1_g000038 Rmu_sc0000365.1_g000061 Rmu_sc0000365.1_g000062 Rmu_sc0000538.1_g000060 Rmu_sc0000538.1_g000061 Rmu_sc0000586.1_g000016 Rmu_sc0000898.1_g000007 Rmu_sc0000913.1_g000003 Rmu_sc0000913.1_g000004 Rmu_sc0000996.1_g000006 Rmu_sc0000996.1_g000007 Rmu_sc0000998.1_g000003 Rmu_sc0001350.1_g000009 Rmu_sc0002079.1_g000009 Rmu_sc0002200.1_g000013 Rmu_sc0002226.1_g000025 Rmu_sc0002279.1_g000014 Rmu_sc0002478.1_g000014 Rmu_sc0002717.1_g000004 Rmu_sc0002868.1_g000027 Rmu_sc0002889.1_g000043 Rmu_sc0003023.1_g000001 Rmu_sc0003110.1_g000006 Rmu_sc0003226.1_g000028 Rmu_sc0003226.1_g000029 Rmu_sc0003337.1_g000053 Rmu_sc0003558.1_g000007 Rmu_sc0004345.1_g000014 Rmu_sc0004383.1_g000007 Rmu_sc0004888.1_g000021 Rmu_sc0005114.1_g000012 Rmu_sc0005223.1_g000019 Rmu_sc0005223.1_g000020 Rmu_sc0005639.1_g000025 Rmu_sc0005685.1_g000027 Rmu_sc0005992.1_g000002 Rmu_sc0006326.1_g000034 Rmu_sc0006326.1_g000035 Rmu_sc0007390.1_g000012 Rmu_sc0007451.1_g000006 Rmu_sc0007825.1_g000003 Rmu_sc0008600.1_g000023 Rmu_sc0009291.1_g000003 Rmu_sc0012046.1_g000001 Rmu_sc0012046.1_g000002 Rmu_sc0012710.1_g000001 Rmu_sc0015238.1_g000001 Rmu_sc0016125.1_g000003 Rmu_sc0016175.1_g000001 Rmu_sc0016898.1_g000001 Rmu_sc0017323.1_g000010 Rmu_sc0017874.1_g000002 Rmu_sc0019167.1_g000001 Rmu_sc0020815.1_g000006 Rmu_sc0025564.1_g000001 Rmu_sc0026418.1_g000001 Rmu_sc0035188.1_g000002 Rmu_sc0039254.1_g000001 Rmu_ssc0000120.1_g000015 Rmu_ssc0000120.1_g000016 Rmu_ssc0000330.1_g000023 Rmu_ssc0000433.1_g000004
rosa_roxburghii Rroxscaffold_1G00047130 Rroxscaffold_1G00051320 Rroxscaffold_1G00056600 Rroxscaffold_2G00109650 Rroxscaffold_2G00119980 Rroxscaffold_3G00222550 Rroxscaffold_3G00224980 Rroxscaffold_3G00251020 Rroxscaffold_6G00411190 Rroxscaffold_7G00166520 Rroxscaffold_7G00172920 Rroxscaffold_7G00191860 Rroxscaffold_7G00194430
rosa_rugosa Rorug01G0198900 Rorug01G0217300 Rorug01G0244500 Rorug02G0147400 Rorug02G0152200 Rorug02G0595500 Rorug02G0595600 Rorug03G0060500 Rorug03G0203000 Rorug03G0285800 Rorug04G0027200 Rorug04G0027300 Rorug04G0225800 Rorug05G0073400 Rorug05G0213300 Rorug05G0324600 Rorug05G0390900 Rorug05G0391000 Rorug05G0391100 Rorug05G0391200 Rorug05G0462900 Rorug05G0473000 Rorug06G0256500 Rorug07G0199000 Rorug07G0208800 Rorug07G0208800 Rorug07G0316600 Rorug07G0316700
rosa_samantha Rh2BG532400 Rh2CG581900 Rh3CG322600 Rh6AG079900 Rh6AG250800 Rh6AG496300 Rh6BG506100 Rh6CG126000 Rh6CG511700 Rh6DG109400 Rh6DG112700 Rh7CG104500 Rh7CG322000 Rh7CG431500
rosa_wichuraiana Rw0G020410 Rw1G009190 Rw1G014580 Rw1G021000 Rw1G022190 Rw2G025900 Rw2G029920 Rw2G037530 Rw3G018560 Rw3G020560 Rw4G008500 Rw4G022520 Rw5G019030 Rw5G031180 Rw5G044830 Rw6G005010 Rw6G006890 Rw6G011330 Rw6G011380 Rw6G023900 Rw7G028490 Rw7G030170 Rw7G030370 Rw7G032030 Rw7G032040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 492, 1171
AclWI GGATC 3 cut(s) 21, 290, 303
AcoI YGGCCR 2 cut(s) 835, 1185
AcsI RAATTY 4 cut(s) 629, 971, 1136, 1165
AcuI CTGAAG 1 cut(s) 219
AcyI GRCGYC 1 cut(s) 509
AfaI GTAC 5 cut(s) 164, 205, 445, 683, 881
AflIII ACRYGT 1 cut(s) 684
AgsI TTSAA 7 cut(s) 21, 53, 373, 387, 463, 561, 677
AjiI CACGTC 1 cut(s) 1106
AjnI CCWGG 1 cut(s) 601
AluBI AGCT 8 cut(s) 126, 530, 1013, 1156, 1197, 1247, 1409, 1437
AluI AGCT 8 cut(s) 126, 530, 1013, 1156, 1197, 1247, 1409, 1437
Alw21I GWGCWC 1 cut(s) 622
Alw26I GTCTC 1 cut(s) 759
AlwI GGATC 3 cut(s) 21, 290, 303
Ama87I CYCGRG 2 cut(s) 251, 875
AoxI GGCC 5 cut(s) 661, 835, 907, 1185, 1390
ApeKI GCWGC 3 cut(s) 338, 1244, 1437
ApoI RAATTY 4 cut(s) 629, 971, 1136, 1165
Asp700I GAANNNNTTC 1 cut(s) 597
AspLEI GCGC 1 cut(s) 966
AspS9I GGNCC 1 cut(s) 358
AsuC2I CCSGG 2 cut(s) 449, 513
AsuHPI GGTGA 4 cut(s) 668, 1331, 1337, 1385
AsuII TTCGAA 1 cut(s) 481
AvaI CYCGRG 2 cut(s) 251, 875
AvaII GGWCC 1 cut(s) 358
AxyI CCTNAGG 2 cut(s) 31, 1394
BalI TGGCCA 1 cut(s) 1187
BamHI GGATCC 1 cut(s) 295
BauI CACGAG 1 cut(s) 950
BbsI GAAGAC 2 cut(s) 105, 273
Bbv12I GWGCWC 1 cut(s) 622
BbvCI CCTCAGC 1 cut(s) 704
BbvI GCAGC 3 cut(s) 350, 1256, 1424
BccI CCATC 5 cut(s) 112, 647, 653, 1279, 1316
BceAI ACGGC 3 cut(s) 850, 913, 1216
BciT130I CCWGG 1 cut(s) 603
BcnI CCSGG 2 cut(s) 449, 513
BcoDI GTCTC 1 cut(s) 759
BfaI CTAG 2 cut(s) 489, 1406
BglII AGATCT 1 cut(s) 1231
BisI GCNGC 3 cut(s) 339, 1245, 1438
BlsI GCNGC 3 cut(s) 340, 1246, 1439
BmcAI AGTACT 1 cut(s) 881
Bme1390I CCNGG 3 cut(s) 449, 513, 603
Bme18I GGWCC 1 cut(s) 358
BmeT110I CYCGRG 2 cut(s) 251, 875
BmgBI CACGTC 1 cut(s) 1106
BmgT120I GGNCC 1 cut(s) 358
BmiI GGNNCC 4 cut(s) 187, 297, 360, 1003
BmrFI CCNGG 3 cut(s) 449, 513, 603
BmsI GCATC 7 cut(s) 23, 482, 513, 795, 1049, 1272, 1300
BpiI GAAGAC 2 cut(s) 105, 273
BplI GAGNNNNNCTC 2 cut(s) 858, 890
BpmI CTGGAG 2 cut(s) 624, 1220
Bpu10I CCTNAGC 1 cut(s) 704
Bpu14I TTCGAA 1 cut(s) 481
BpuEI CTTGAG 1 cut(s) 896
BpuMI CCSGG 2 cut(s) 449, 513
BsaAI YACGTR 1 cut(s) 417
BsaBI GATNNNNATC 2 cut(s) 561, 1326
BsaHI GRCGYC 1 cut(s) 509
BsaJI CCNNGG 5 cut(s) 291, 447, 512, 1032, 1366
Bse21I CCTNAGG 2 cut(s) 31, 1394
Bse3DI GCAATG 1 cut(s) 620
Bse8I GATNNNNATC 2 cut(s) 561, 1326
BseBI CCWGG 1 cut(s) 603
BseDI CCNNGG 5 cut(s) 291, 447, 512, 1032, 1366
BseJI GATNNNNATC 2 cut(s) 561, 1326
BseMI GCAATG 1 cut(s) 620
BseMII CTCAG 4 cut(s) 45, 718, 1066, 1408
BseRI GAGGAG 3 cut(s) 178, 347, 692
BseXI GCAGC 3 cut(s) 350, 1256, 1424
BshFI GGCC 5 cut(s) 663, 837, 909, 1187, 1392
BsiHKAI GWGCWC 1 cut(s) 622
BsiHKCI CYCGRG 2 cut(s) 251, 875
BsiSI CCGG 2 cut(s) 449, 512
BslFI GGGAC 3 cut(s) 361, 530, 1413
BsmAI GTCTC 1 cut(s) 759
BsmFI GGGAC 3 cut(s) 361, 530, 1413
BsmI GAATGC 1 cut(s) 708
BsnI GGCC 5 cut(s) 663, 837, 909, 1187, 1392
BsoBI CYCGRG 2 cut(s) 251, 875
Bsp119I TTCGAA 1 cut(s) 481
Bsp1286I GDGCHC 1 cut(s) 622
Bsp143I GATC 9 cut(s) 26, 120, 179, 295, 748, 1048, 1075, 1231, 1327
BspACI CCGC 2 cut(s) 492, 1171
BspANI GGCC 5 cut(s) 663, 837, 909, 1187, 1392
BspCNI CTCAG 4 cut(s) 44, 717, 1065, 1407
BspLI GGNNCC 4 cut(s) 187, 297, 360, 1003
BspPI GGATC 3 cut(s) 21, 290, 303
BspT104I TTCGAA 1 cut(s) 481
BsrDI GCAATG 1 cut(s) 620
BssECI CCNNGG 5 cut(s) 291, 447, 512, 1032, 1366
BssMI GATC 9 cut(s) 26, 120, 179, 295, 748, 1048, 1075, 1231, 1327
BssNI GRCGYC 1 cut(s) 509
BssSI CACGAG 1 cut(s) 950
BssT1I CCWWGG 2 cut(s) 291, 1032
Bst2BI CACGAG 1 cut(s) 950
Bst2UI CCWGG 1 cut(s) 603
Bst4CI ACNGT 6 cut(s) 369, 730, 761, 1319, 1367, 1424
Bst6I CTCTTC 2 cut(s) 774, 855
BstACI GRCGYC 1 cut(s) 509
BstBAI YACGTR 1 cut(s) 417
BstBI TTCGAA 1 cut(s) 481
BstC8I GCNNGC 2 cut(s) 528, 1411
BstDEI CTNAG 5 cut(s) 31, 704, 1052, 1331, 1394
BstDSI CCRYGG 1 cut(s) 1366
BstHHI GCGC 1 cut(s) 966
BstKTI GATC 9 cut(s) 29, 123, 182, 298, 751, 1051, 1078, 1234, 1330
BstMAI GTCTC 1 cut(s) 759
BstMBI GATC 9 cut(s) 26, 120, 179, 295, 748, 1048, 1075, 1231, 1327
BstMWI GCNNNNNNNGC 5 cut(s) 147, 344, 498, 897, 906
BstNI CCWGG 1 cut(s) 603
BstNSI RCATGY 1 cut(s) 688
BstSCI CCNGG 3 cut(s) 447, 511, 601
BstSNI TACGTA 1 cut(s) 417
BstV1I GCAGC 3 cut(s) 350, 1256, 1424
BstV2I GAAGAC 2 cut(s) 105, 273
BstX2I RGATCY 3 cut(s) 26, 295, 1231
BstYI RGATCY 3 cut(s) 26, 295, 1231
Bsu36I CCTNAGG 2 cut(s) 31, 1394
BsuRI GGCC 5 cut(s) 663, 837, 909, 1187, 1392
BtgI CCRYGG 1 cut(s) 1366
BtgZI GCGATG 1 cut(s) 84
BtrI CACGTC 1 cut(s) 1106
BtsIMutI CAGTG 3 cut(s) 648, 766, 1060
Cac8I GCNNGC 2 cut(s) 528, 1411
CfoI GCGC 1 cut(s) 966
Cfr13I GGNCC 1 cut(s) 358
CseI GACGC 1 cut(s) 517
Csp6I GTAC 5 cut(s) 163, 204, 444, 682, 880
CspCI CAANNNNNGTGG 2 cut(s) 1240, 1275
CviAII CATG 6 cut(s) 132, 342, 637, 685, 917, 1301
CviQI GTAC 5 cut(s) 163, 204, 444, 682, 880
DdeI CTNAG 5 cut(s) 31, 704, 1052, 1331, 1394
DpnI GATC 9 cut(s) 28, 122, 181, 297, 750, 1050, 1077, 1233, 1329
DpnII GATC 9 cut(s) 26, 120, 179, 295, 748, 1048, 1075, 1231, 1327
DraI TTTAAA 2 cut(s) 739, 1141
EaeI YGGCCR 2 cut(s) 835, 1185
Eam1104I CTCTTC 2 cut(s) 774, 855
EarI CTCTTC 2 cut(s) 774, 855
Eco105I TACGTA 1 cut(s) 417
Eco130I CCWWGG 2 cut(s) 291, 1032
Eco147I AGGCCT 2 cut(s) 909, 1392
Eco47I GGWCC 1 cut(s) 358
Eco57I CTGAAG 1 cut(s) 219
Eco81I CCTNAGG 2 cut(s) 31, 1394
Eco88I CYCGRG 2 cut(s) 251, 875
EcoO109I RGGNCCY 1 cut(s) 358
EcoRII CCWGG 1 cut(s) 601
EcoT14I CCWWGG 2 cut(s) 291, 1032
ErhI CCWWGG 2 cut(s) 291, 1032
FaeI CATG 6 cut(s) 135, 345, 640, 688, 920, 1304
FalI AAGNNNNNCTT 4 cut(s) 365, 397, 395, 427
FaqI GGGAC 3 cut(s) 361, 530, 1413
FatI CATG 6 cut(s) 131, 341, 636, 684, 916, 1300
Fnu4HI GCNGC 3 cut(s) 339, 1245, 1438
Fsp4HI GCNGC 3 cut(s) 339, 1245, 1438
FspBI CTAG 2 cut(s) 489, 1406
GlaI GCGC 1 cut(s) 965
GluI GCNGC 3 cut(s) 339, 1245, 1438
GsuI CTGGAG 2 cut(s) 624, 1220
HaeIII GGCC 5 cut(s) 663, 837, 909, 1187, 1392
HapII CCGG 2 cut(s) 449, 512
HgaI GACGC 1 cut(s) 517
HhaI GCGC 1 cut(s) 966
Hin1I GRCGYC 1 cut(s) 509
Hin1II CATG 6 cut(s) 135, 345, 640, 688, 920, 1304
Hin6I GCGC 1 cut(s) 964
HinP1I GCGC 1 cut(s) 964
HincII GTYRAC 1 cut(s) 1084
HindII GTYRAC 1 cut(s) 1084
HinfI GANTC 7 cut(s) 57, 217, 323, 557, 716, 1385, 1401
HpaII CCGG 2 cut(s) 449, 512
HphI GGTGA 4 cut(s) 668, 1331, 1337, 1385
Hpy166II GTNNAC 2 cut(s) 1084, 1376
Hpy188I TCNGA 3 cut(s) 222, 1231, 1276
Hpy188III TCNNGA 6 cut(s) 21, 572, 677, 713, 752, 1237
Hpy8I GTNNAC 2 cut(s) 1084, 1376
HpyAV CCTTC 2 cut(s) 569, 633
HpyCH4III ACNGT 6 cut(s) 369, 730, 761, 1319, 1367, 1424
HpyCH4IV ACGT 2 cut(s) 416, 1105
HpyCH4V TGCA 6 cut(s) 473, 613, 1040, 1151, 1313, 1427
HpyF10VI GCNNNNNNNGC 5 cut(s) 147, 344, 498, 897, 906
HpyF3I CTNAG 5 cut(s) 31, 704, 1052, 1331, 1394
HpySE526I ACGT 2 cut(s) 416, 1105
Hsp92I GRCGYC 1 cut(s) 509
Hsp92II CATG 6 cut(s) 135, 345, 640, 688, 920, 1304
HspAI GCGC 1 cut(s) 964
Kzo9I GATC 9 cut(s) 26, 120, 179, 295, 748, 1048, 1075, 1231, 1327
LmnI GCTCC 3 cut(s) 191, 625, 1445
Lsp1109I GCAGC 3 cut(s) 350, 1256, 1424
LweI GCATC 7 cut(s) 23, 482, 513, 795, 1049, 1272, 1300
MaeI CTAG 2 cut(s) 489, 1406
MaeII ACGT 2 cut(s) 416, 1105
MaeIII GTNAC 2 cut(s) 152, 694
MalI GATC 9 cut(s) 28, 122, 181, 297, 750, 1050, 1077, 1233, 1329
MboI GATC 9 cut(s) 26, 120, 179, 295, 748, 1048, 1075, 1231, 1327
MflI RGATCY 3 cut(s) 26, 295, 1231
MhlI GDGCHC 1 cut(s) 622
MlsI TGGCCA 1 cut(s) 1187
MluNI TGGCCA 1 cut(s) 1187
MlyI GAGTC 3 cut(s) 51, 1394, 1395
Mox20I TGGCCA 1 cut(s) 1187
MroXI GAANNNNTTC 1 cut(s) 597
MscI TGGCCA 1 cut(s) 1187
MseI TTAA 9 cut(s) 210, 584, 738, 786, 1092, 1110, 1140, 1209, 1418
Msp20I TGGCCA 1 cut(s) 1187
MspI CCGG 2 cut(s) 449, 512
MspR9I CCNGG 3 cut(s) 449, 513, 603
Mva1269I GAATGC 1 cut(s) 708
MvaI CCWGG 1 cut(s) 603
MwoI GCNNNNNNNGC 5 cut(s) 147, 344, 498, 897, 906
NciI CCSGG 2 cut(s) 449, 513
NdeII GATC 9 cut(s) 26, 120, 179, 295, 748, 1048, 1075, 1231, 1327
NlaIII CATG 6 cut(s) 135, 345, 640, 688, 920, 1304
NlaIV GGNNCC 4 cut(s) 187, 297, 360, 1003
NmeAIII GCCGAG 1 cut(s) 39
NmuCI GTSAC 1 cut(s) 694
NspI RCATGY 1 cut(s) 688
NspV TTCGAA 1 cut(s) 481
PaeR7I CTCGAG 1 cut(s) 875
PceI AGGCCT 2 cut(s) 909, 1392
PciI ACATGT 1 cut(s) 684
PcsI WCGNNNNNNNCGW 2 cut(s) 107, 116
PctI GAATGC 1 cut(s) 708
PdmI GAANNNNTTC 1 cut(s) 597
PfeI GAWTC 4 cut(s) 217, 323, 557, 716
PfoI TCCNGGA 1 cut(s) 601
PkrI GCNGC 3 cut(s) 340, 1246, 1439
PleI GAGTC 3 cut(s) 51, 1393, 1395
PpsI GAGTC 3 cut(s) 51, 1393, 1395
Ppu21I YACGTR 1 cut(s) 417
PpuMI RGGWCCY 1 cut(s) 358
PscI ACATGT 1 cut(s) 684
Psp5II RGGWCCY 1 cut(s) 358
Psp6I CCWGG 1 cut(s) 601
PspGI CCWGG 1 cut(s) 601
PspN4I GGNNCC 4 cut(s) 187, 297, 360, 1003
PspPI GGNCC 1 cut(s) 358
PspPPI RGGWCCY 1 cut(s) 358
PspXI VCTCGAGB 1 cut(s) 875
PsuI RGATCY 3 cut(s) 26, 295, 1231
RsaI GTAC 5 cut(s) 164, 205, 445, 683, 881
RsaNI GTAC 5 cut(s) 163, 204, 444, 682, 880
SaqAI TTAA 9 cut(s) 210, 584, 738, 786, 1092, 1110, 1140, 1209, 1418
SatI GCNGC 3 cut(s) 339, 1245, 1438
Sau3AI GATC 9 cut(s) 26, 120, 179, 295, 748, 1048, 1075, 1231, 1327
Sau96I GGNCC 1 cut(s) 358
ScaI AGTACT 1 cut(s) 881
SchI GAGTC 3 cut(s) 51, 1394, 1395
ScrFI CCNGG 3 cut(s) 449, 513, 603
SduI GDGCHC 1 cut(s) 622
SfaNI GCATC 7 cut(s) 23, 482, 513, 795, 1049, 1272, 1300
Sfr274I CTCGAG 1 cut(s) 875
SfuI TTCGAA 1 cut(s) 481
SinI GGWCC 1 cut(s) 358
SlaI CTCGAG 1 cut(s) 875
SmlI CTYRAG 2 cut(s) 875, 911
SmoI CTYRAG 2 cut(s) 875, 911
SnaBI TACGTA 1 cut(s) 417
SseBI AGGCCT 2 cut(s) 909, 1392
SsiI CCGC 2 cut(s) 492, 1171
SspMI CTAG 2 cut(s) 489, 1406
StuI AGGCCT 2 cut(s) 909, 1392
StyD4I CCNGG 3 cut(s) 447, 511, 601
StyI CCWWGG 2 cut(s) 291, 1032
TaaI ACNGT 6 cut(s) 369, 730, 761, 1319, 1367, 1424
TaiI ACGT 2 cut(s) 419, 1108
TaqI TCGA 8 cut(s) 119, 351, 481, 571, 645, 719, 747, 876
TatI WGTACW 4 cut(s) 162, 203, 681, 879
TfiI GAWTC 4 cut(s) 217, 323, 557, 716
Tru1I TTAA 9 cut(s) 210, 584, 738, 786, 1092, 1110, 1140, 1209, 1418
Tru9I TTAA 9 cut(s) 210, 584, 738, 786, 1092, 1110, 1140, 1209, 1418
TscAI CASTG 3 cut(s) 655, 766, 1060
TseFI GTSAC 1 cut(s) 694
TseI GCWGC 3 cut(s) 338, 1244, 1437
Tsp45I GTSAC 1 cut(s) 694
TspDTI ATGAA 4 cut(s) 435, 625, 660, 933
TspRI CASTG 3 cut(s) 655, 766, 1060
VpaK11BI GGWCC 1 cut(s) 358
XapI RAATTY 4 cut(s) 629, 971, 1136, 1165
XceI RCATGY 1 cut(s) 688
XhoI CTCGAG 1 cut(s) 875
XmnI GAANNNNTTC 1 cut(s) 597
XspI CTAG 2 cut(s) 489, 1406
ZrmI AGTACT 1 cut(s) 881
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.